view test-data/MADE1.out.domtblout @ 4:f92edeb5e4c4 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7c3ac4ad5a64b737e1b8f73c522e006097596f1d
author iuc
date Mon, 11 Jun 2018 15:52:53 -0400
parents dca536c5cca5
children 8d5ec58d2172
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#                                                                                      --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession    tlen query name                    accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#-------------------  ---------- -----          -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   1   5         1         1   -4.5   0.0    30    54 80044 80068 80033 80072 0.81 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   2   5         1         1   -6.6   3.3    13    71 154012 154072 154011 154076 0.75 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   3   5   2.4e-10   2.4e-10   27.4   0.7     1    43 174456 174498 174456 174577 0.66 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   4   5     2e-12     2e-12   34.1   0.7     2    80 302388 302466 302387 302466 0.86 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   5   5     0.011     0.011    2.8   0.7    27    75 304060 304107 304022 304109 0.62 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
#
# Program:         hmmscan
# Version:         3.2 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_20.dat
# Target file:     localref.hmm
# Option settings: hmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_22.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_23.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_24.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_20.dat 
# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/21/working
# Date:            Fri Jun  8 12:17:53 2018
# [ok]