Mercurial > repos > iuc > hmmer_hmmemit
comparison test-data/uniprot_globins_match.out @ 7:96b127c59e6a draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
author | iuc |
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date | Wed, 21 Jul 2021 14:11:49 +0000 |
parents | 9415f29a3926 |
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6:a6f41287ef2b | 7:96b127c59e6a |
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1 # hmmsearch :: search profile(s) against a sequence database | 1 # hmmsearch :: search profile(s) against a sequence database |
2 # HMMER 3.3 (Nov 2019); http://hmmer.org/ | 2 # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ |
3 # Copyright (C) 2019 Howard Hughes Medical Institute. | 3 # Copyright (C) 2020 Howard Hughes Medical Institute. |
4 # Freely distributed under the BSD open source license. | 4 # Freely distributed under the BSD open source license. |
5 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | 5 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - |
6 # query HMM file: /tmp/tmpqydies2m/files/1/e/c/dataset_1eca2f81-02d4-4cd0-9081-3ea0f7eb36d7.dat | 6 # query HMM file: /tmp/tmpzdnl83p_/files/f/6/6/dataset_f66fafa4-758d-4ace-89be-ff71fce4f56c.dat |
7 # target sequence database: /tmp/tmpqydies2m/files/a/4/d/dataset_a4d3f992-2c56-4231-9590-fe0ab1f6413b.dat | 7 # target sequence database: /tmp/tmpzdnl83p_/files/0/d/9/dataset_0d912a57-511c-4a51-a642-30fdf00f581c.dat |
8 # max ASCII text line length: unlimited | 8 # max ASCII text line length: unlimited |
9 # Vit filter P threshold: <= 0.001 | 9 # Vit filter P threshold: <= 0.001 |
10 # Fwd filter P threshold: <= 1e-05 | 10 # Fwd filter P threshold: <= 1e-05 |
11 # random number seed set to: 4 | 11 # random number seed set to: 4 |
12 # number of worker threads: 1 | 12 # number of worker threads: 0 |
13 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | 13 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - |
14 | 14 |
15 Query: dataset_a435d3bd-3e95-4c54-859f-736e9bc413b2 [M=149] | 15 Query: dataset_a435d3bd-3e95-4c54-859f-736e9bc413b2 [M=149] |
16 Scores for complete sequences (score includes all domains): | 16 Scores for complete sequences (score includes all domains): |
17 --- full sequence --- --- best 1 domain --- -#dom- | 17 --- full sequence --- --- best 1 domain --- -#dom- |
57 Passed Vit filter: 2 (1); expected 0.0 (0.001) | 57 Passed Vit filter: 2 (1); expected 0.0 (0.001) |
58 Passed Fwd filter: 2 (1); expected 0.0 (1e-05) | 58 Passed Fwd filter: 2 (1); expected 0.0 (1e-05) |
59 Initial search space (Z): 2 [actual number of targets] | 59 Initial search space (Z): 2 [actual number of targets] |
60 Domain search space (domZ): 2 [number of targets reported over threshold] | 60 Domain search space (domZ): 2 [number of targets reported over threshold] |
61 # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 | 61 # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 |
62 # Mc/sec: 18.86 | 62 # Mc/sec: 34.40 |
63 // | 63 // |
64 [ok] | 64 [ok] |