hmmer_hmmemit: test-data/globins45.fa comparison

comparison test-data/globins45.fa @ 0:f48f9bbfcfd8 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47

author	iuc
date	Sat, 25 Jun 2016 15:05:37 -0400
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comparison

equal deleted inserted replaced

--1:000000000000
+:f48f9bbfcfd8
+>MYG_ESCGI
+VLSDAEWQLVLNIWAKVEADVAGHGQDILIRLFKGHPETLEKFDKFKHLK
+TEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIP
+IKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKYKELG
+FQG
+>MYG_HORSE
+GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLK
+TEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIP
+IKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKYKELG
+FQG
+>MYG_PROGU
+GLSDGEWQLVLNVWGKVEGDLSGHGQEVLIRLFKGHPETLEKFDKFKHLK
+AEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIP
+VKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKYKELG
+FQG
+>MYG_SAISC
+GLSDGEWQLVLNIWGKVEADIPSHGQEVLISLFKGHPETLEKFDKFKHLK
+SEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIP
+VKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKYKELG
+FQG
+>MYG_LYCPI
+GLSDGEWQIVLNIWGKVETDLAGHGQEVLIRLFKNHPETLDKFDKFKHLK
+TEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIP
+VKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKYKELG
+FQG
+>MYG_MOUSE
+GLSDGEWQLVLNVWGKVEADLAGHGQEVLIGLFKTHPETLDKFDKFKNLK
+SEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIP
+VKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKYKELG
+FQG
+>MYG_MUSAN
+VDWEKVNSVWSAVESDLTAIGQNILLRLFEQYPESQNHFPKFKNKSLGEL
+KDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFT
+KITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEYKAANFQG
+>HBA_AILME
+VLSPADKTNVKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLSP
+GSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKL
+LSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKYR
+>HBA_PROLO
+VLSPADKANIKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLSP
+GSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKL
+LSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKYR
+>HBA_PAGLA
+VLSSADKNNIKATWDKIGSHAGEYGAEALERTFISFPTTKTYFPHFDLSH
+GSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKL
+LSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKYR
+>HBA_MACFA
+VLSPADKTNVKAAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLSH
+GSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKL
+LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
+>HBA_MACSI
+VLSPADKTNVKDAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLSH
+GSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKL
+LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
+>HBA_PONPY
+VLSPADKTNVKTAWGKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLSH
+GSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKL
+LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
+>HBA2_GALCR
+VLSPTDKSNVKAAWEKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLSH
+GSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKL
+LRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKYR
+>HBA_MESAU
+VLSAKDKTNISEAWGKIGGHAGEYGAEALERMFFVYPTTKTYFPHFDVSH
+GSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKL
+LSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKYR
+>HBA2_BOSMU
+VLSAADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPHFDLSH
+GSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKL
+LSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKYR
+>HBA_ERIEU
+VLSATDKANVKTFWGKLGGHGGEYGGEALDRMFQAHPTTKTYFPHFDLNP
+GSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKL
+LSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKYR
+>HBA_FRAPO
+VLSAADKNNVKGIFGKISSHAEDYGAEALERMFITYPSTKTYFPHFDLSH
+GSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKL
+LGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKYR
+>HBA_PHACO
+VLSAADKNNVKGIFTKIAGHAEEYGAEALERMFITYPSTKTYFPHFDLSH
+GSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKL
+LGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKYR
+>HBA_TRIOC
+VLSANDKTNVKTVFTKITGHAEDYGAETLERMFITYPPTKTYFPHFDLHH
+GSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKL
+LGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKYR
+>HBA_ANSSE
+VLSAADKGNVKTVFGKIGGHAEEYGAETLQRMFQTFPQTKTYFPHFDLQP
+GSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKF
+LGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKYR
+>HBA_COLLI
+VLSANDKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHFDLSH
+GSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKL
+LGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKYR
+>HBAD_CHLME
+MLTADDKKLLTQLWEKVAGHQEEFGSEALQRMFLTYPQTKTYFPHFDLHP
+GSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKL
+LAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKYR
+>HBAD_PASMO
+MLTAEDKKLIQQIWGKLGGAEEEIGADALWRMFHSYPSTKTYFPHFDLSQ
+GSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKF
+LSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKYR
+>HBAZ_HORSE
+SLTKAERTMVVSIWGKISMQADAVGTEALQRLFSSYPQTKTYFPHFDLHE
+GSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKF
+LSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKYR
+>HBA4_SALIR
+SLSAKDKANVKAIWGKILPKSDEIGEQALSRMLVVYPQTKAYFSHWASVA
+PGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFK
+ILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKYR
+>HBB_ORNAN
+VHLSGGEKSAVTNLWGKVNINELGGEALGRLLVVYPWTQRFFEAFGDLSS
+AGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDP
+ENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKYH
+>HBB_TACAC
+VHLSGSEKTAVTNLWGHVNVNELGGEALGRLLVVYPWTQRFFESFGDLSS
+ADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDP
+ENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKYH
+>HBE_PONPY
+VHFTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSS
+PSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDP
+ENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYH
+>HBB_SPECI
+VHLSDGEKNAISTAWGKVHAAEVGAEALGRLLVVYPWTQRFFDSFGDLSS
+ASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDP
+ENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKYH
+>HBB_SPETO
+VHLTDGEKNAISTAWGKVNAAEIGAEALGRLLVVYPWTQRFFDSFGDLSS
+ASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDP
+ENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKYH
+>HBB_EQUHE
+VQLSGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSN
+PAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDP
+ENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH
+>HBB_SUNMU
+VHLSGEEKACVTGLWGKVNEDEVGAEALGRLLVVYPWTQRFFDSFGDLSS
+ASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDP
+ENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKYH
+>HBB_CALAR
+VHLTGEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLST
+PDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDP
+ENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKYH
+>HBB_MANSP
+VHLTPEEKTAVTTLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSS
+PDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDP
+ENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH
+>HBB_URSMA
+VHLTGEEKSLVTGLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSS
+ADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDP
+ENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH
+>HBB_RABIT
+VHLSSEEKSAVTALWGKVNVEEVGGEALGRLLVVYPWTQRFFESFGDLSS
+ANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDP
+ENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKYH
+>HBB_TUPGL
+VHLSGEEKAAVTGLWGKVDLEKVGGQSLGSLLIVYPWTQRFFDSFGDLSS
+PSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDP
+ENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKYH
+>HBB_TRIIN
+VHLTPEEKALVIGLWAKVNVKEYGGEALGRLLVVYPWTQRFFEHFGDLSS
+ASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDP
+ENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKYH
+>HBB_COLLI
+VHWSAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSS
+ATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDP
+ENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKYH
+>HBB_LARRI
+VHWSAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSS
+PTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDP
+ENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKYH
+>HBB1_VAREX
+VHWTAEEKQLICSLWGKIDVGLIGGETLAGLLVIYPWTQRQFSHFGNLSS
+PTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDP
+TNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRYH
+>HBB2_XENTR
+VHWTAEEKATIASVWGKVDIEQDGHDALSRLLVVYPWTQRYFSSFGNLSN
+VSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDP
+ENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGYF
+>HBBL_RANCA
+VHWTAEEKAVINSVWQKVDVEQDGHEALTRLFIVYPWTQRYFSTFGDLSS
+PAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDP
+ENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSYH
+>HBB2_TRICR
+VHLTAEDRKEIAAILGKVNVDSLGGQCLARLIVVNPWSRRYFHDFGDLSS
+CDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDP
+ENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY

Mercurial > repos > iuc > hmmer_hmmemit

comparison test-data/globins45.fa @ 0:f48f9bbfcfd8 draft