Mercurial > repos > iuc > hmmer_hmmfetch

comparison test-data/MADE1.out.pfamtblout @ 7:a28fd001de59 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
author iuc
date Wed, 21 Jul 2021 14:14:16 +0000
parents fb459c8fb2ba
children
comparison
equal deleted inserted replaced
6:01c842e297f5 7:a28fd001de59
1 # Sequence scores 1 # Sequence scores
2 # --------------- 2 # ---------------
3 # 3 #
4 # name bits E-value n exp bias description 4 # name bits E-value n exp bias description
5 # ------------------- ------ --------- --- ----- ----- --------------------- 5 # ------------------- ------ --------- --- ----- ----- ---------------------
6 MADE1 51.2 9.3e-18 4 8.6 26.3 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
7 6
8 # Domain scores 7 # Domain scores
9 # ------------- 8 # -------------
10 # 9 #
11 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description 10 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description
12 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- 11 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ ---------------------
13 MADE1 34.8 1.3e-12 3 0.7 302387 302466 302388 302466 2 80 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
14 MADE1 27.4 2.4e-10 1 0.6 174456 174520 174456 174498 1 43 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
15 MADE1 1.4 0.033 4 0.4 304029 304108 304060 304106 27 74 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
16 MADE1 -8.4 1 2 5.8 197272 197342 197274 197341 12 79 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
17 # 12 #
18 # Program: hmmscan 13 # Program: hmmscan
19 # Version: 3.3 (Nov 2019) 14 # Version: 3.3.2 (Nov 2020)
20 # Pipeline mode: SEARCH 15 # Pipeline mode: SEARCH
21 # Query file: /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat 16 # Query file: /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat
22 # Target file: localref.hmm 17 # Target file: localref.hmm
23 # Option settings: hmmscan --tblout /tmp/tmpqydies2m/files/1/d/a/dataset_1da10e33-3e1c-48fc-abfb-7e3c263ec0df.dat --domtblout /tmp/tmpqydies2m/files/7/2/3/dataset_723f3cf1-e0de-4616-aec7-dd16680f3be3.dat --pfamtblout /tmp/tmpqydies2m/files/7/3/4/dataset_734c7f25-0a22-431b-9a7a-58849fcd6009.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat 18 # Option settings: hmmscan --tblout /tmp/tmpgjabmh94/files/9/8/3/dataset_9834554f-8f1e-4161-9c16-f4bd5042207c.dat --domtblout /tmp/tmpgjabmh94/files/8/e/b/dataset_8ebf81cb-d0c9-41a3-a725-c9e2f0d65d82.dat --pfamtblout /tmp/tmpgjabmh94/files/1/f/0/dataset_1f08bd39-0984-447e-b71e-7bf3442d708d.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 0 localref.hmm /tmp/tmpgjabmh94/files/d/c/f/dataset_dcfa47ad-e0da-4c8c-a808-c5bbd7eb2eda.dat
24 # Current dir: /tmp/tmpqydies2m/job_working_directory/000/8/working 19 # Current dir: /tmp/tmpgjabmh94/job_working_directory/000/3/working
25 # Date: Thu May 14 18:53:22 2020 20 # Date: Fri Jul 16 11:01:18 2021
26 # [ok] 21 # [ok]