Mercurial > repos > iuc > hmmer_hmmscan

comparison test-data/MADE1.out.tblout @ 0:216b19e6c317 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47
author iuc
date Sat, 25 Jun 2016 15:06:16 -0400
parents
children 01219a31c48e
comparison
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-1:000000000000 0:216b19e6c317
1 # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
2 # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target
3 #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------
4 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 7.1e-18 51.5 28.5 2e-12 34.0 0.7 9.6 5 0 0 5 5 5 2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
5 #
6 # Program: hmmscan
7 # Version: 3.1b1 (May 2013)
8 # Pipeline mode: SCAN
9 # Query file: test-data/dna_target.fa
10 # Target file: test-data/MADE1.hmm
11 # Option settings: hmmscan --tblout tblout --domtblout domtblout --pfamtblout pfamtblout test-data/MADE1.hmm test-data/dna_target.fa
12 # Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer
13 # Date: Tue Feb 10 14:40:35 2015
14 # [ok]