Mercurial > repos > iuc > hmmer_hmmscan

comparison test-data/MADE1.nhmmscan_out.tblout @ 7:be072920a53e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
author iuc
date Wed, 21 Jul 2021 14:10:08 +0000
parents be7097d6e3ff
children
comparison
equal deleted inserted replaced
6:d92dd2f040cd 7:be072920a53e
4 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 43 174456 174498 174456 174518 80 + 1.9e-08 32.8 8.3 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon 4 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 43 174456 174498 174456 174518 80 + 1.9e-08 32.8 8.3 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
5 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 78 302466 302389 302466 302387 80 - 6.3e-08 31.0 6.7 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon 5 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 78 302466 302389 302466 302387 80 - 6.3e-08 31.0 6.7 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
6 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 43 80 174493 174456 174513 174456 80 - 4.9e-06 25.0 7.0 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon 6 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 43 80 174493 174456 174513 174456 80 - 4.9e-06 25.0 7.0 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
7 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 41 71 304073 304103 304053 304109 80 + 2.2 6.9 7.2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon 7 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 41 71 304073 304103 304053 304109 80 + 2.2 6.9 7.2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
8 # 8 #
9 # Program: hmmscan 9 # Program: nhmmscan
10 # Version: 3.3 (Nov 2019) 10 # Version: 3.3.2 (Nov 2020)
11 # Pipeline mode: SCAN 11 # Pipeline mode: SCAN
12 # Query file: /tmp/tmpqydies2m/files/f/a/5/dataset_fa559c91-0436-48cb-a47d-20062d4af284.dat 12 # Query file: /tmp/tmp2vk0_a8v/files/7/d/6/dataset_7d62e9c6-1db3-4a28-9770-d56c56ccfb17.dat
13 # Target file: localref.hmm 13 # Target file: localref.hmm
14 # Option settings: nhmmscan --tblout /tmp/tmpqydies2m/files/4/7/2/dataset_4723128d-8711-4edb-8afe-a68476a6c127.dat --dfamtblout /tmp/tmpqydies2m/files/1/a/e/dataset_1aeea50b-1263-4750-8237-4fc3f10c0999.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/f/a/5/dataset_fa559c91-0436-48cb-a47d-20062d4af284.dat 14 # Option settings: nhmmscan --tblout /tmp/tmp2vk0_a8v/files/7/0/4/dataset_70487df9-4948-42c0-a250-638bcc64487a.dat --dfamtblout /tmp/tmp2vk0_a8v/files/8/0/f/dataset_80fdcb47-0041-4a2c-bc0a-4820ac3c27d0.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 0 localref.hmm /tmp/tmp2vk0_a8v/files/7/d/6/dataset_7d62e9c6-1db3-4a28-9770-d56c56ccfb17.dat
15 # Current dir: /tmp/tmpqydies2m/job_working_directory/000/20/working 15 # Current dir: /tmp/tmp2vk0_a8v/job_working_directory/000/6/working
16 # Date: Thu May 14 18:55:28 2020 16 # Date: Fri Jul 16 11:22:43 2021
17 # [ok] 17 # [ok]