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view test-data/MADE1.out.pfamtblout @ 1:b49a4465041d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 2c4b4a154e2f07730fdfdaf66a09e1e09ac5efde
author iuc
date Mon, 14 Nov 2016 15:11:16 -0500
parents 216b19e6c317
children 01219a31c48e
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# Sequence scores
# ---------------
#
# name                  bits   E-value   n   exp  bias    description
# ------------------- ------ --------- --- ----- -----    ---------------------
MADE1                   51.0     1e-17   5   9.6  28.5    MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon

# Domain scores
# -------------
#
#  name                 bits   E-value   hit  bias env-st env-en ali-st ali-en hmm-st hmm-en     description
# ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------      ---------------------
MADE1                   33.7   2.7e-12     4   0.7 302387 302466 302388 302466      2     80     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                   27.4   2.4e-10     3   0.7 174456 174577 174456 174514      1     44     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                    2.9     0.011     5   0.7 304021 304109 304060 304107     27     75     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                   -4.2         1     1   0.1  80030  80073  80044  80068     30     54     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                   -6.6         1     2   3.3 154011 154076 154012 154072     13     71     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
#
# Program:         hmmscan
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/tmpYWzicI/files/000/dataset_2.dat
# Target file:     /tmp/tmpYWzicI/files/000/dataset_1.dat
# Option settings: hmmscan --tblout /tmp/tmpYWzicI/files/000/dataset_4.dat --domtblout /tmp/tmpYWzicI/files/000/dataset_5.dat --pfamtblout /tmp/tmpYWzicI/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpYWzicI/files/000/dataset_1.dat /tmp/tmpYWzicI/files/000/dataset_2.dat 
# Current dir:     /tmp/tmpYWzicI/job_working_directory/000/3
# Date:            Sat Jun 25 19:05:15 2016
# [ok]