diff test-data/phmmer.out @ 4:6867ed975e25 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7c3ac4ad5a64b737e1b8f73c522e006097596f1d
author iuc
date Mon, 11 Jun 2018 15:51:39 -0400
parents 1dde27bbdcba
children d753d9169482
line wrap: on
line diff
--- a/test-data/phmmer.out	Sat Apr 07 03:49:37 2018 -0400
+++ b/test-data/phmmer.out	Mon Jun 11 15:51:39 2018 -0400
@@ -1,18 +1,18 @@
 # phmmer :: search a protein sequence against a protein database
-# HMMER 3.1b1 (May 2013); http://hmmer.org/
-# Copyright (C) 2013 Howard Hughes Medical Institute.
-# Freely distributed under the GNU General Public License (GPLv3).
+# HMMER 3.2 (June 2018); http://hmmer.org/
+# Copyright (C) 2018 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query sequence file:             test-data/globins45.fa
-# target sequence database:        test-data/uniprot_matches.fasta
-# per-seq hits tabular output:     test-data/phmmer.tblout
-# per-dom hits tabular output:     test-data/phmmer.domtblout
-# pfam-style tabular hit output:   test-data/phmmer.pfamtblout
+# query sequence file:             /tmp/tmpp4O0Ju/files/000/dataset_45.dat
+# target sequence database:        /tmp/tmpp4O0Ju/files/000/dataset_46.dat
+# per-seq hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_48.dat
+# per-dom hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_49.dat
+# pfam-style tabular hit output:   /tmp/tmpp4O0Ju/files/000/dataset_50.dat
 # max ASCII text line length:      unlimited
 # Vit filter P threshold:       <= 0.001
 # Fwd filter P threshold:       <= 1e-05
 # random number seed set to:       4
-# number of worker threads:        2
+# number of worker threads:        1
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
 Query:       MYG_ESCGI  [L=153]
@@ -53,16 +53,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.67
 //
 Query:       MYG_HORSE  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -102,16 +102,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.15
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.81
 //
 Query:       MYG_PROGU  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -151,16 +151,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.81
 //
 Query:       MYG_SAISC  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -200,16 +200,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.78
 //
 Query:       MYG_LYCPI  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -249,16 +249,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.15
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.74
 //
 Query:       MYG_MOUSE  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -298,16 +298,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.78
 //
 Query:       MYG_MUSAN  [L=148]
 Scores for complete sequences (score includes all domains):
@@ -347,16 +347,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (148 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (148 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.48
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.88
 //
 Query:       HBA_AILME  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -396,16 +396,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.80
 //
 Query:       HBA_PROLO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -445,16 +445,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.73
 //
 Query:       HBA_PAGLA  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -494,16 +494,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.33
 //
 Query:       HBA_MACFA  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -543,16 +543,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.65
 //
 Query:       HBA_MACSI  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -592,16 +592,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.73
 //
 Query:       HBA_PONPY  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -641,16 +641,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.67
 //
 Query:       HBA2_GALCR  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -690,16 +690,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.68
 //
 Query:       HBA_MESAU  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -739,16 +739,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.41
 //
 Query:       HBA2_BOSMU  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -788,16 +788,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02
-# Mc/sec: 2.12
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.64
 //
 Query:       HBA_ERIEU  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -837,16 +837,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.76
 //
 Query:       HBA_FRAPO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -886,16 +886,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.70
 //
 Query:       HBA_PHACO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -935,16 +935,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.56
 //
 Query:       HBA_TRIOC  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -984,16 +984,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.35
 //
 Query:       HBA_ANSSE  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1033,16 +1033,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.52
 //
 Query:       HBA_COLLI  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1082,16 +1082,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.79
 //
 Query:       HBAD_CHLME  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1131,16 +1131,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.87
 //
 Query:       HBAD_PASMO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1180,16 +1180,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.10
 //
 Query:       HBAZ_HORSE  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1229,16 +1229,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.21
 //
 Query:       HBA4_SALIR  [L=142]
 Scores for complete sequences (score includes all domains):
@@ -1278,16 +1278,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (142 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (142 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.07
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.72
 //
 Query:       HBB_ORNAN  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1327,16 +1327,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.01s 00:00:00.05 Elapsed: 00:00:00.05
-# Mc/sec: 0.88
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.63
 //
 Query:       HBB_TACAC  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1376,16 +1376,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.82
 //
 Query:       HBE_PONPY  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1425,16 +1425,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.02
+# Mc/sec: 1.68
 //
 Query:       HBB_SPECI  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1474,16 +1474,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.10
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.16
 //
 Query:       HBB_SPETO  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1523,16 +1523,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.50
 //
 Query:       HBB_EQUHE  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1572,16 +1572,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.16
 //
 Query:       HBB_SUNMU  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1621,16 +1621,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.00
 //
 Query:       HBB_CALAR  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1670,16 +1670,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.02
+# Mc/sec: 1.87
 //
 Query:       HBB_MANSP  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1719,16 +1719,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.10
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.86
 //
 Query:       HBB_URSMA  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1768,16 +1768,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.65
 //
 Query:       HBB_RABIT  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1817,16 +1817,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.57
 //
 Query:       HBB_TUPGL  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1866,16 +1866,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.80
 //
 Query:       HBB_TRIIN  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1915,16 +1915,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.80
 //
 Query:       HBB_COLLI  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1964,16 +1964,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.10
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.22
 //
 Query:       HBB_LARRI  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2013,16 +2013,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.82
 //
 Query:       HBB1_VAREX  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2062,16 +2062,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.75
 //
 Query:       HBB2_XENTR  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2111,16 +2111,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02
+# Mc/sec: 1.82
 //
 Query:       HBBL_RANCA  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2160,16 +2160,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.80
 //
 Query:       HBB2_TRICR  [L=145]
 Scores for complete sequences (score includes all domains):
@@ -2196,15 +2196,15 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (145 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (145 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         1  (0.5); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               1  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.09
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.87
 //
 [ok]