Mercurial > repos > iuc > hmmer_hmmsearch

view test-data/globins.domtblout @ 5:b774ae8e1609 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author iuc
date Tue, 16 Jun 2020 05:27:07 -0400
parents 6867ed975e25
children d753d9169482
line wrap: on
line source

#                                                                                                    --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name                                   accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- -----                         -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
sp|P02024|HBB_GORGO  -            147 dataset_a435d3bd-3e95-4c54-859f-736e9bc413b2 -            149   1.3e-70  223.2   0.1   1   1   1.4e-70   1.4e-70  223.0   0.1     1   149     2   147     2   147 0.99 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
sp|P02185|MYG_PHYCD  -            154 dataset_a435d3bd-3e95-4c54-859f-736e9bc413b2 -            149   5.8e-70  221.1   3.3   1   1   6.4e-70   6.4e-70  220.9   3.3     2   149     2   148     1   148 0.99 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
#
# Program:         hmmsearch
# Version:         3.3 (Nov 2019)
# Pipeline mode:   SEARCH
# Query file:      /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat
# Target file:     /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat
# Option settings: hmmsearch --tblout /tmp/tmpqydies2m/files/4/6/b/dataset_46bff7ad-a6de-481d-adb4-50ccab8aacb8.dat --domtblout /tmp/tmpqydies2m/files/b/2/5/dataset_b258e52b-de8c-4e23-86d8-c69ebf229c95.dat --pfamtblout /tmp/tmpqydies2m/files/f/b/8/dataset_fb8cde04-dee0-4b38-9125-bf4766986c0c.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat 
# Current dir:     /tmp/tmpqydies2m/job_working_directory/000/11/working
# Date:            Thu May 14 18:54:00 2020
# [ok]