Mercurial > repos > iuc > hmmer_jackhmmer
comparison test-data/MADE1.nhmmscan_out.tblout @ 5:5113c71c7031 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author | iuc |
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date | Tue, 16 Jun 2020 05:32:33 -0400 |
parents | 793967b6ae8a |
children | 6e27bb3f0fa6 |
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4:793967b6ae8a | 5:5113c71c7031 |
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1 # target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to modlen strand E-value score bias description of target | 1 # target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to modlen strand E-value score bias description of target |
2 #------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- --------------------- | 2 #------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- --------------------- |
3 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 4 80 302390 302466 302387 302466 80 + 8.7e-11 39.2 7.4 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | 3 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 4 80 302390 302466 302387 302466 80 + 4e-11 41.3 7.5 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon |
4 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 43 174456 174498 174456 174518 80 + 6.4e-08 30.0 8.3 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | 4 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 43 174456 174498 174456 174518 80 + 1.9e-08 32.8 8.3 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon |
5 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 77 302466 302390 302466 302387 80 - 9.3e-08 29.5 6.1 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | 5 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 1 78 302466 302389 302466 302387 80 - 6.3e-08 31.0 6.7 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon |
6 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 43 80 174493 174456 174513 174456 80 - 6.3e-06 23.7 7.0 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | 6 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 43 80 174493 174456 174513 174456 80 - 4.9e-06 25.0 7.0 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon |
7 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 41 72 304073 304104 304053 304109 80 + 1.4 6.5 7.0 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon | 7 MADE1 DF0000629.2 humanchr1/239220001-239550000 - 41 71 304073 304103 304053 304109 80 + 2.2 6.9 7.2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon |
8 # | 8 # |
9 # Program: hmmscan | 9 # Program: hmmscan |
10 # Version: 3.2 (June 2018) | 10 # Version: 3.3 (Nov 2019) |
11 # Pipeline mode: SCAN | 11 # Pipeline mode: SCAN |
12 # Query file: /tmp/tmpp4O0Ju/files/000/dataset_41.dat | 12 # Query file: /tmp/tmpqydies2m/files/f/a/5/dataset_fa559c91-0436-48cb-a47d-20062d4af284.dat |
13 # Target file: localref.hmm | 13 # Target file: localref.hmm |
14 # Option settings: nhmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_43.dat --dfamtblout /tmp/tmpp4O0Ju/files/000/dataset_44.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_41.dat | 14 # Option settings: nhmmscan --tblout /tmp/tmpqydies2m/files/4/7/2/dataset_4723128d-8711-4edb-8afe-a68476a6c127.dat --dfamtblout /tmp/tmpqydies2m/files/1/a/e/dataset_1aeea50b-1263-4750-8237-4fc3f10c0999.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/f/a/5/dataset_fa559c91-0436-48cb-a47d-20062d4af284.dat |
15 # Current dir: /tmp/tmpp4O0Ju/job_working_directory/000/33/working | 15 # Current dir: /tmp/tmpqydies2m/job_working_directory/000/20/working |
16 # Date: Fri Jun 8 12:19:16 2018 | 16 # Date: Thu May 14 18:55:28 2020 |
17 # [ok] | 17 # [ok] |