Mercurial > repos > iuc > hmmer_jackhmmer

comparison test-data/phmmer.pfamtblout @ 7:6e27bb3f0fa6 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
author iuc
date Wed, 21 Jul 2021 14:16:41 +0000
parents 793967b6ae8a
children
comparison
equal deleted inserted replaced
6:d9ce554da9b4 7:6e27bb3f0fa6
671 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description 671 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description
672 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- 672 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ ---------------------
673 sp|P02024|HBB_GORGO 144.1 3e-46 1 0.0 2 146 2 146 1 145 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 673 sp|P02024|HBB_GORGO 144.1 3e-46 1 0.0 2 146 2 146 1 145 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
674 # 674 #
675 # Program: phmmer 675 # Program: phmmer
676 # Version: 3.2 (June 2018) 676 # Version: 3.3.2 (Nov 2020)
677 # Pipeline mode: SEARCH 677 # Pipeline mode: SEARCH
678 # Query file: /tmp/tmpp4O0Ju/files/000/dataset_45.dat 678 # Query file: /tmp/tmpzdnl83p_/files/6/e/b/dataset_6ebbde12-ebc2-45e1-bca1-5b28034097f2.dat
679 # Target file: /tmp/tmpp4O0Ju/files/000/dataset_46.dat 679 # Target file: /tmp/tmpzdnl83p_/files/f/5/8/dataset_f5890da8-ad9f-4fc0-908d-0b9dc0c44e28.dat
680 # Option settings: phmmer --tblout /tmp/tmpp4O0Ju/files/000/dataset_48.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_49.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_50.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_45.dat /tmp/tmpp4O0Ju/files/000/dataset_46.dat 680 # Option settings: phmmer --tblout /tmp/tmpzdnl83p_/files/0/d/1/dataset_0d12c973-afff-4faa-9147-e31051f4f5ca.dat --domtblout /tmp/tmpzdnl83p_/files/d/b/2/dataset_db25fae1-b539-436c-860b-dae65bd95d8a.dat --pfamtblout /tmp/tmpzdnl83p_/files/c/1/0/dataset_c100c9b8-9cdb-4b7f-ac1b-0a7658854933.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 0 /tmp/tmpzdnl83p_/files/6/e/b/dataset_6ebbde12-ebc2-45e1-bca1-5b28034097f2.dat /tmp/tmpzdnl83p_/files/f/5/8/dataset_f5890da8-ad9f-4fc0-908d-0b9dc0c44e28.dat
681 # Current dir: /tmp/tmpp4O0Ju/job_working_directory/000/36/working 681 # Current dir: /tmp/tmpzdnl83p_/job_working_directory/000/45/working
682 # Date: Fri Jun 8 12:19:38 2018 682 # Date: Fri Jul 16 10:35:18 2021
683 # [ok] 683 # [ok]