Mercurial > repos > iuc > hmmer_jackhmmer

comparison jackhmmer.xml @ 6:d9ce554da9b4 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit db615ae8a189ad988ec08090051a128355a4be70"
author iuc
date Thu, 14 Jan 2021 15:38:47 +0000
parents 5113c71c7031
children 6e27bb3f0fa6
comparison
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5:5113c71c7031 6:d9ce554da9b4
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="hmmer_jackhmmer" name="jackhmmer" version="@TOOL_VERSION@"> 2 <tool id="hmmer_jackhmmer" name="jackhmmer" version="@TOOL_VERSION@+galaxy1">
3 <description>iteratively search a protein sequence against a protein database (PSIBLAST-like)</description> 3 <description>iteratively search a protein sequence against a protein database (PSIBLAST-like)</description>
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <expand macro="stdio"/> 8 <expand macro="stdio"/>
9 <command><![CDATA[ 9 <command><![CDATA[
10 @ADDTHREADS@
10 jackhmmer 11 jackhmmer
11 -N $N 12 -N $N
12 @OFORMAT_WITH_OPTS@ 13 @OFORMAT_WITH_OPTS@
13 @HSSI@ 14 @HSSI@
14 @THRESHOLDS@ 15 @THRESHOLDS@