Mercurial > repos > iuc > hmmer_nhmmer

comparison test-data/MADE1.out.pfamtblout @ 0:f239ab5f45f4 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47
author iuc
date Sat, 25 Jun 2016 15:07:17 -0400
parents
children be0cc39776f9
comparison
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-1:000000000000 0:f239ab5f45f4
1 # Sequence scores
2 # ---------------
3 #
4 # name bits E-value n exp bias description
5 # ------------------- ------ --------- --- ----- ----- ---------------------
6 MADE1 51.0 1e-17 5 9.6 28.5 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
7
8 # Domain scores
9 # -------------
10 #
11 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description
12 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ ---------------------
13 MADE1 33.7 2.7e-12 4 0.7 302387 302466 302388 302466 2 80 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
14 MADE1 27.4 2.4e-10 3 0.7 174456 174577 174456 174514 1 44 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
15 MADE1 2.9 0.011 5 0.7 304021 304109 304060 304107 27 75 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
16 MADE1 -4.2 1 1 0.1 80030 80073 80044 80068 30 54 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
17 MADE1 -6.6 1 2 3.3 154011 154076 154012 154072 13 71 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
18 #
19 # Program: hmmscan
20 # Version: 3.1b2 (February 2015)
21 # Pipeline mode: SEARCH
22 # Query file: /tmp/tmpYWzicI/files/000/dataset_2.dat
23 # Target file: /tmp/tmpYWzicI/files/000/dataset_1.dat
24 # Option settings: hmmscan --tblout /tmp/tmpYWzicI/files/000/dataset_4.dat --domtblout /tmp/tmpYWzicI/files/000/dataset_5.dat --pfamtblout /tmp/tmpYWzicI/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpYWzicI/files/000/dataset_1.dat /tmp/tmpYWzicI/files/000/dataset_2.dat
25 # Current dir: /tmp/tmpYWzicI/job_working_directory/000/3
26 # Date: Sat Jun 25 19:05:15 2016
27 # [ok]