Mercurial > repos > iuc > hmmer_nhmmer
diff test-data/fn3.hmm @ 0:f239ab5f45f4 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47
| author | iuc |
|---|---|
| date | Sat, 25 Jun 2016 15:07:17 -0400 |
| parents | |
| children | be0cc39776f9 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/fn3.hmm Sat Jun 25 15:07:17 2016 -0400 @@ -0,0 +1,285 @@ +HMMER3/f [3.1 | February 2013] +NAME fn3 +ACC PF00041.13 +DESC Fibronectin type III domain +LENG 86 +ALPH amino +RF no +MM no +CONS yes +CS yes +MAP yes +DATE Fri Feb 15 06:04:13 2013 +NSEQ 106 +EFFN 11.415833 +CKSUM 3564431818 +GA 8.00 7.20 +TC 8.00 7.20 +NC 7.90 7.90 +STATS LOCAL MSV -9.4043 0.71847 +STATS LOCAL VITERBI -9.7737 0.71847 +STATS LOCAL FORWARD -3.8341 0.71847 +HMM A C D E F G H I K L M N P Q R S T V W Y + m->m m->i m->d i->m i->i d->m d->d + COMPO 2.70330 4.91262 3.03272 2.64079 3.60307 2.84344 3.74204 3.07942 2.79841 2.65364 4.14864 2.95826 2.87120 3.02176 2.96125 2.44783 2.59757 2.57680 4.02726 3.21526 + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00338 6.08833 6.81068 0.61958 0.77255 0.00000 * + 1 3.16986 5.21447 4.52134 3.29953 4.34285 4.18764 4.30886 3.35801 3.70246 2.11675 4.32057 4.32984 0.76706 3.91880 4.22437 3.23552 3.21670 2.88223 5.80355 3.93889 1 p - 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