Mercurial > repos > iuc > hmmer_phmmer

comparison test-data/globins.tblout @ 5:c1de05e20868 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author iuc
date Tue, 16 Jun 2020 05:34:01 -0400
parents 74fc6d7d40f1
children 8a791afd99fb
comparison
equal deleted inserted replaced
4:74fc6d7d40f1 5:c1de05e20868
1 # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- 1 # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
2 # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target 2 # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target
3 #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 3 #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------
4 sp|P02185|MYG_PHYCD - dataset_x - 1.8e-70 222.7 3.2 2e-70 222.6 3.2 1.0 1 0 0 1 1 1 1 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 4 sp|P02024|HBB_GORGO - dataset_a435d3bd-3e95-4c54-859f-736e9bc413b2 - 1.3e-70 223.2 0.1 1.4e-70 223.0 0.1 1.0 1 0 0 1 1 1 1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
5 sp|P02024|HBB_GORGO - dataset_x - 9.2e-69 217.2 0.1 1e-68 217.0 0.1 1.0 1 0 0 1 1 1 1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 5 sp|P02185|MYG_PHYCD - dataset_a435d3bd-3e95-4c54-859f-736e9bc413b2 - 5.8e-70 221.1 3.3 6.4e-70 220.9 3.3 1.0 1 0 0 1 1 1 1 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
6 # 6 #
7 # Program: hmmsearch 7 # Program: hmmsearch
8 # Version: 3.2 (June 2018) 8 # Version: 3.3 (Nov 2019)
9 # Pipeline mode: SEARCH 9 # Pipeline mode: SEARCH
10 # Query file: /tmp/tmpp4O0Ju/files/000/dataset_25.dat 10 # Query file: /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat
11 # Target file: /tmp/tmpp4O0Ju/files/000/dataset_26.dat 11 # Target file: /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat
12 # Option settings: hmmsearch --tblout /tmp/tmpp4O0Ju/files/000/dataset_28.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_29.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_30.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_25.dat /tmp/tmpp4O0Ju/files/000/dataset_26.dat 12 # Option settings: hmmsearch --tblout /tmp/tmpqydies2m/files/4/6/b/dataset_46bff7ad-a6de-481d-adb4-50ccab8aacb8.dat --domtblout /tmp/tmpqydies2m/files/b/2/5/dataset_b258e52b-de8c-4e23-86d8-c69ebf229c95.dat --pfamtblout /tmp/tmpqydies2m/files/f/b/8/dataset_fb8cde04-dee0-4b38-9125-bf4766986c0c.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpqydies2m/files/6/d/6/dataset_6d69e63c-e7d8-450d-b7f8-3e08a51472f0.dat /tmp/tmpqydies2m/files/8/2/8/dataset_8282288a-91ea-4a46-89c2-d1f3b4e67c52.dat
13 # Current dir: /tmp/tmpp4O0Ju/job_working_directory/000/24/working 13 # Current dir: /tmp/tmpqydies2m/job_working_directory/000/11/working
14 # Date: Fri Jun 8 12:18:13 2018 14 # Date: Thu May 14 18:54:00 2020
15 # [ok] 15 # [ok]