Mercurial > repos > iuc > hmmer_phmmer

view test-data/globins.tblout @ 4:74fc6d7d40f1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7c3ac4ad5a64b737e1b8f73c522e006097596f1d
author iuc
date Mon, 11 Jun 2018 15:50:40 -0400
parents 48a88b7a4734
children c1de05e20868
line wrap: on
line source

#                                                               --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name           accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
sp|P02185|MYG_PHYCD  -          dataset_x            -            1.8e-70  222.7   3.2     2e-70  222.6   3.2   1.0   1   0   0   1   1   1   1 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
sp|P02024|HBB_GORGO  -          dataset_x            -            9.2e-69  217.2   0.1     1e-68  217.0   0.1   1.0   1   0   0   1   1   1   1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
#
# Program:         hmmsearch
# Version:         3.2 (June 2018)
# Pipeline mode:   SEARCH
# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_25.dat
# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_26.dat
# Option settings: hmmsearch --tblout /tmp/tmpp4O0Ju/files/000/dataset_28.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_29.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_30.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_25.dat /tmp/tmpp4O0Ju/files/000/dataset_26.dat
# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/24/working
# Date:            Fri Jun  8 12:18:13 2018
# [ok]