# HG changeset patch
# User iuc
# Date 1522864758 14400
# Node ID 3c27cd24641d10a3072673ce3395f351f72efa62
# Parent  e9a322ffa55390cbb8014d2aa984101ea0994b32
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit a1a31824fc24d5e652c263b998b7f2363cbd7610

diff -r e9a322ffa553 -r 3c27cd24641d phmmer.xml
--- a/phmmer.xml	Mon Nov 14 15:12:18 2016 -0500
+++ b/phmmer.xml	Wed Apr 04 13:59:18 2018 -0400
@@ -38,13 +38,13 @@
   <outputs>
     <data format="txt" name="output" label="PHMMER search of $seqfile.name in $seqdb.name"/>
     <data format="txt" name="tblout" label="Table of per-sequence hits from HMM matches of $seqfile.name in $seqdb.name">
-      <filter>'tblout' in str(oformat)</filter>
+      <filter>oformat and 'tblout' in oformat</filter>
     </data>
     <data format="txt" name="domtblout" label="Table of per-domain hits from HMM matches of $seqfile.name in $seqdb.name">
-      <filter>'domtblout' in str(oformat)</filter>
+      <filter>oformat and 'domtblout' in oformat</filter>
     </data>
     <data format="txt" name="pfamtblout" label="Table of per-sequence/per-domain hits from HMM matches of $seqfile.name in $seqdb.name">
-      <filter>'pfamtblout' in str(oformat)</filter>
+      <filter>oformat and 'pfamtblout' in oformat</filter>
     </data>
   </outputs>
   <tests>
diff -r e9a322ffa553 -r 3c27cd24641d tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Nov 14 15:12:18 2016 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,6 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-  <package name="hmmer" version="3.1b2">
-    <repository changeset_revision="2a1881410dc9" name="package_hmmer_3_1b2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  </package>
-</tool_dependency>