Information for 3-GTTGCTGCCA (Motif 6)

A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A G T C
p-value:1e-1
log p-value:-2.907e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif219.9
Percentage of Background Sequences with motif5.49%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background103.4 +/- 83.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTTGCTGCCA-
-TTCCCGCCAA
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T
A C G T G C A T A C G T A G T C A T G C A G T C C T A G T A G C G T A C C T G A G C T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GTTGCTGCCA--
----TTGCCAAG
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTGCTGCCA
--VGCTGGCA
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A
A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTTGCTGCCA-
AGATGCTRCTRCCHT
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTTGCTGCCA--
---CGTGCCAAG
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Aef1/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTGCTGCCA
TGTTGTTG---
A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A
C G A T A C T G A C G T C G A T A C T G A C G T A C G T A C T G A C G T A C G T A C G T

SUM1(MacIsaac)/Yeast

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTGCTGCCA---
ATTTACTGACGCNT
A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
G T C A C G A T G A C T A G C T C G T A A T G C A G C T C T A G C G T A A G T C C T A G A G T C G A C T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTTGCTGCCA--
GGTGYTGACAGS
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Unknown3/Drosophila-Promoters/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTGCTGCCA------
-GCGCTGCCAGMTBGT
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A C T G G A T C A C G T A C T G A G T C A G T C C G T A T A C G G T A C A G C T A G C T C A T G A G C T

CRZ1(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTTGCTGCCA
GAGGCTG---
A C T G A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A
A C T G C G A T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T