Mercurial > repos > iuc > homer_findmotifsgenome

comparison homer_findMotifsGenome.xml @ 3:4fe92af4542b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit 16a919905f336e34e237388c1921d0f4f8a368af
author iuc
date Thu, 06 Apr 2023 16:22:23 +0000
parents a8f207b43f64
children
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2:a8f207b43f64 3:4fe92af4542b
1 <tool id="homer_findMotifsGenome" name="findMotifsGenome" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.05" license="MIT"> 1 <tool id="homer_findMotifsGenome" name="findMotifsGenome" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@" license="MIT">
2 <description/> 2 <description/>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="xrefs"/> 6 <expand macro="xrefs"/>
136 #end if 136 #end if
137 ]]></command> 137 ]]></command>
138 <inputs> 138 <inputs>
139 <param name="input" type="data" format="bed,encodepeak,tabular" label="Peak file"/> 139 <param name="input" type="data" format="bed,encodepeak,tabular" label="Peak file"/>
140 <conditional name="genome"> 140 <conditional name="genome">
141 <param name="source" type="select" label="Will you select a reference genome from your history or use a installed genome?"> 141 <param name="source" type="select" label="Will you select a reference genome from your history or use an installed genome?">
142 <option value="preparsed">Preparsed (fasta is available and has been preparsed to specific size)</option> 142 <option value="preparsed">Preparsed (fasta is available and has been preparsed to specific size)</option>
143 <option value="installed">Installed (fasta is available but will be preparsed as run time)</option> 143 <option value="installed">Installed (fasta is available but will be preparsed as run time)</option>
144 <option value="history">From History (fasta will be preparsed at run time)</option> 144 <option value="history">From History (fasta will be preparsed at run time)</option>
145 </param> 145 </param>
146 <when value="preparsed"> 146 <when value="preparsed">