Mercurial > repos > iuc > homer_findmotifsgenome

comparison test-data/annotations_default_simplified.txt @ 0:ec974e69e0b5 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit e49d856e0181edc6120220a1b819cba2466a4289"
author iuc
date Sun, 08 Aug 2021 11:02:42 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:ec974e69e0b5
1 Intergenic chr2 1 74667309 + N 1900000000
2 promoter-TSS (ENSMUST00000001872) chr2 74667310 74668410 + P 1
3 exon (ENSMUST00000001872, exon 1 of 2) chr2 74668411 74669078 + E 33
4 intron (ENSMUST00000001872, intron 1 of 1) chr2 74669079 74669885 + I 88
5 exon (ENSMUST00000001872, exon 2 of 2) chr2 74669886 74670136 + E 35
6 3' UTR (ENSMUST00000001872, exon 2 of 2) chr2 74670137 74671498 + 3UTR 34
7 TTS (ENSMUST00000001872) chr2 74671499 74672599 + TTS 17
8 Intergenic--2 chr2 74672600 74674012 + N 1900000000
9 promoter-TSS (ENSMUST00000001878) chr2 74674013 74675113 + P 2
10 exon (ENSMUST00000001878, exon 1 of 2) chr2 74675114 74675654 + E 37
11 intron (ENSMUST00000001878, intron 1 of 1) chr2 74675655 74675813 + I 88
12 exon (ENSMUST00000001878, exon 2 of 2) chr2 74675814 74676052 + E 39
13 3' UTR (ENSMUST00000001878, exon 2 of 2) chr2 74676053 74677604 + 3UTR 38
14 TTS (ENSMUST00000001878) chr2 74677605 74678556 + TTS 18
15 promoter-TSS (ENSMUST00000048086) chr2 74678557 74679657 + P 4
16 exon (ENSMUST00000048086, exon 1 of 2) chr2 74679658 74679809 + E 44
17 intron (ENSMUST00000048086, intron 1 of 1) chr2 74679810 74681322 + I 88
18 promoter-TSS (ENSMUST00000142312) chr2 74681323 74682423 + P 11
19 exon (ENSMUST00000142312, exon 1 of 2) chr2 74682424 74682445 + E 69
20 promoter-TSS (ENSMUST00000136302) chr2 74682446 74683546 + P 10
21 intron (ENSMUST00000136302, intron 1 of 2) chr2 74683547 74683902 + I 88
22 exon (ENSMUST00000048086, exon 2 of 2) chr2 74683903 74684067 + E 45
23 TTS (ENSMUST00000142312) chr2 74684068 74685168 + TTS 27
24 intron (ENSMUST00000136302, intron 2 of 2) chr2 74684357 74685168 + I 88
25 exon (ENSMUST00000048086, exon 2 of 2)--2 chr2 74685169 74686915 + E 45
26 TTS (ENSMUST00000048086) chr2 74686916 74688016 + TTS 20
27 intron (ENSMUST00000136302, intron 2 of 2)--2 chr2 74688017 74690923 + I 88
28 promoter-TSS (ENSMUST00000061745) chr2 74690924 74692024 + P 6
29 exon (ENSMUST00000061745, exon 1 of 2) chr2 74692025 74692724 + E 51
30 intron (ENSMUST00000061745, intron 1 of 1) chr2 74692725 74694090 + I 88
31 exon (ENSMUST00000061745, exon 2 of 2) chr2 74694091 74694093 + E 53
32 TTS (ENSMUST00000136302) chr2 74694094 74694519 + TTS 26
33 promoter-TSS (ENSMUST00000126966) chr2 74694520 74695620 + P 9
34 TTS (ENSMUST00000061745) chr2 74695621 74696105 + TTS 22
35 TTS (ENSMUST00000190845) chr2 74696106 74696726 - TTS 31
36 promoter-TSS (ENSMUST00000059272) chr2 74696727 74697827 + P 5
37 promoter-TSS (ENSMUST00000190845) chr2 74697828 74698586 - P 15
38 exon (ENSMUST00000059272, exon 1 of 2) chr2 74698587 74698833 + E 47
39 intron (ENSMUST00000059272, intron 1 of 1) chr2 74698834 74699179 + I 88
40 exon (ENSMUST00000059272, exon 2 of 2) chr2 74699180 74699421 + E 49
41 3' UTR (ENSMUST00000059272, exon 2 of 2) chr2 74699422 74700005 + 3UTR 48
42 TTS (ENSMUST00000198895) chr2 74700006 74700107 - TTS 32
43 TTS (ENSMUST00000059272) chr2 74700108 74701041 + TTS 21
44 promoter-TSS (ENSMUST00000198895) chr2 74701042 74702142 - P 16
45 Intergenic--3 chr2 74702143 74703614 + N 1900000000
46 promoter-TSS (ENSMUST00000151380) chr2 74703615 74703904 + P 14
47 promoter-TSS (ENSMUST00000019749) chr2 74703905 74705005 + P 3
48 promoter-TSS (ENSMUST00000074721) chr2 74705006 74705252 + P 7
49 5' UTR (ENSMUST00000019749, exon 1 of 2) chr2 74705253 74705547 + 5UTR 40
50 exon (ENSMUST00000019749, exon 1 of 2) chr2 74705548 74706118 + E 41
51 intron (ENSMUST00000074721, intron 1 of 1) chr2 74706119 74706513 + I 88
52 exon (ENSMUST00000019749, exon 2 of 2) chr2 74706514 74706711 + E 43
53 TTS (ENSMUST00000151380) chr2 74706712 74707206 + TTS 30
54 TTS (ENSMUST00000074721) chr2 74707207 74707832 + TTS 23
55 TTS (ENSMUST00000019749) chr2 74707833 74708933 + TTS 19
56 Intergenic--4 chr2 74708934 74709192 + N 1900000000
57 TTS (ENSMUST00000145799) chr2 74709193 74710293 - TTS 29
58 intron (ENSMUST00000145799, intron 2 of 2) chr2 74710294 74710926 - I 88
59 promoter-TSS (ENSMUST00000111983) chr2 74710927 74712027 + P 8
60 promoter-TSS (ENSMUST00000144040) chr2 74712028 74712029 + P 12
61 5' UTR (ENSMUST00000111983, exon 1 of 3) chr2 74712030 74712316 + 5UTR 58
62 intron (ENSMUST00000111983, intron 1 of 2) chr2 74712317 74714270 + I 88
63 exon (ENSMUST00000145799, exon 2 of 3) chr2 74714271 74714401 - E 80
64 intron (ENSMUST00000145799, intron 1 of 2) chr2 74714402 74715705 - I 88
65 exon (ENSMUST00000145799, exon 1 of 3) chr2 74715706 74715895 - E 81
66 promoter-TSS (ENSMUST00000145799) chr2 74715896 74716996 - P 13
67 intron (ENSMUST00000111983, intron 1 of 2)--2 chr2 74716997 74722552 + I 88
68 exon (ENSMUST00000144040, exon 2 of 7) chr2 74722553 74722631 + E 73
69 intron (ENSMUST00000144040, intron 2 of 6) chr2 74722632 74723331 + I 88
70 exon (ENSMUST00000144040, exon 3 of 7) chr2 74723332 74723367 + E 74
71 intron (ENSMUST00000144040, intron 3 of 6) chr2 74723368 74725462 + I 88
72 exon (ENSMUST00000144040, exon 4 of 7) chr2 74725463 74725597 + E 75
73 intron (ENSMUST00000144040, intron 4 of 6) chr2 74725598 74725844 + I 88
74 exon (ENSMUST00000144040, exon 5 of 7) chr2 74725845 74725978 + E 76
75 intron (ENSMUST00000144040, intron 5 of 6) chr2 74725979 74726875 + I 88
76 exon (ENSMUST00000144040, exon 6 of 7) chr2 74726876 74726932 + E 77
77 intron (ENSMUST00000144040, intron 6 of 6) chr2 74726933 74728358 + I 88
78 exon (ENSMUST00000144040, exon 7 of 7) chr2 74728359 74728767 + E 78
79 TTS (ENSMUST00000144040) chr2 74728768 74729868 + TTS 28
80 intron (ENSMUST00000111983, intron 1 of 2)--3 chr2 74729869 74743927 + I 88
81 5' UTR (ENSMUST00000111983, exon 2 of 3) chr2 74743928 74744011 + 5UTR 59
82 exon (ENSMUST00000111983, exon 2 of 3) chr2 74744012 74744555 + E 60
83 intron (ENSMUST00000111983, intron 2 of 2) chr2 74744556 74746321 + I 88
84 exon (ENSMUST00000111983, exon 3 of 3) chr2 74746322 74747079 + E 62
85 3' UTR (ENSMUST00000111983, exon 3 of 3) chr2 74747080 74748170 + 3UTR 61
86 TTS (ENSMUST00000111983) chr2 74748171 74749271 + TTS 24
87 Intergenic--5 chr2 74749272 1500000000 + N 1900000000