Mercurial > repos > iuc > homer_gtf_to_annotations
diff test-data/motif_test1/homerResults/motif8.info.html @ 0:8ebb6520eef4 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit e49d856e0181edc6120220a1b819cba2466a4289"
| author | iuc |
|---|---|
| date | Sun, 08 Aug 2021 11:04:17 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/motif_test1/homerResults/motif8.info.html Sun Aug 08 11:04:17 2021 +0000 @@ -0,0 +1,1343 @@ +<HTML><HEAD><TITLE>Motif 8</TITLE></HEAD> +<H2>Information for 5-GATGATGC (Motif 8)</H2> +<svg width="205" height="50"> + <g font-family="Arial" font-weight="bold" font-size="66.5"> + <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> + <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,0,44)">C</text> + <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> + <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,0,34)">G</text> + + <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,49)">C</text> + <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,25,44)">G</text> + <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> + <text fill="#00BB00" x="0" y="0" 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target="_blank" HREF="motif8RV.motif">reverse opposite</A></TD></TR> +<TR><TD>SVG Files for Logos:</TD><TD><A HREF="motif8.logo.svg">forward logo</A><BR/><A HREF="motif8RV.logo.svg">reverse opposite</A></TD></TR> +</TABLE> +<H3>Matches to Known Motifs</H3> +<TABLE border="1" cellpading="0" cellspacing="0"> +<TR><TD> +<H4>AGL42/MA1201.1/Jaspar</H4> +<TABLE><TR><TD> +<TABLE> +<TR><TD>Match Rank:</TD><TD>1</TD></TR> +<TR><TD>Score:</TD><TD>0.90</TD</TR> +<TR><TD>Offset:</TD><TD>0</TD</TR> +<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR> +<TR><TD>Alignment:</TD><TD><FONT face="courier">GATGATGC</FONT><BR><FONT face="courier">GATGATG-</FONT></TD></TR></TABLE> +</TD><TD> +<svg width="205" height="50"> + <g font-family="Arial" font-weight="bold" font-size="66.5"> + <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> + <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,0,44)">C</text> + <text fill="#DD0000" x="0" y="0" 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