Mercurial > repos > iuc > homer_scanmotifgenomewide

diff tool_data_table_conf.xml.sample @ 1:465be78e9b05 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit 16a919905f336e34e237388c1921d0f4f8a368af
author iuc
date Thu, 06 Apr 2023 16:21:39 +0000
parents db456c398880
children
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--- a/tool_data_table_conf.xml.sample	Mon Dec 13 15:13:33 2021 +0000
+++ b/tool_data_table_conf.xml.sample	Thu Apr 06 16:21:39 2023 +0000
@@ -2,11 +2,16 @@
     <!-- Locations of all fasta files under genome directory -->
     <table name="all_fasta" comment_char="#">
         <columns>value, dbkey, name, path</columns>
-        <file path="tool-data/all_fasta.loc" />
+        <file path="tool-data/all_fasta.loc"/>
     </table>
     <!-- Locations of preparsed genomes -->
     <table name="homer_preparse" comment_char="#">
         <columns>value, dbkey, mask, size, name, path, path_fasta, version</columns>
-        <file path="tool-data/homer_preparse.loc" />
+        <file path="tool-data/homer_preparse.loc"/>
+    </table>
+    <!-- Built-in homer promoter and ID DBs (dir of <env>/share/data, 1 per organism) -->
+    <table name="homer_promoters" comment_char="#">
+        <columns>value, dbkey, organism, path, organism_version, promoter_version</columns>
+        <file path="tool-data/homer_promoters.loc"/>
     </table>
 </tables>