Mercurial > repos > iuc > humann2_reduce_table

annotate test-data/relab_levelwise_renormalized_pathway_abundance.tsv @ 6:e0b670a43758 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2 commit 8d953926efdf23d8c3fb8719341dff51a55a92f2"
author iuc
date Sun, 28 Mar 2021 06:58:45 +0000
parents e795ba0b91f4
children
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e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
parents:
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1 # Pathway demo_Abundance
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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2 UNMAPPED 0.193449
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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3 UNINTEGRATED 0.796985
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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4 UNINTEGRATED|g__Bacteroides.s__Bacteroides_vulgatus 0.584618
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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5 UNINTEGRATED|g__Bacteroides.s__Bacteroides_dorei 0.393252
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
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6 UNINTEGRATED|unclassified 0.00936201
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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7 PWY-5423: oleoresin monoterpene volatiles biosynthesis 0.00172203
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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8 PWY-5423: oleoresin monoterpene volatiles biosynthesis|unclassified 0.00276929
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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9 PWY-6305: putrescine biosynthesis IV 0.00154401
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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10 PWY-6305: putrescine biosynthesis IV|unclassified 0.002483
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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11 PWY490-3: nitrate reduction VI (assimilatory) 0.001374
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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12 PWY490-3: nitrate reduction VI (assimilatory)|unclassified 0.0022096
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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13 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I 0.00133038
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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14 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I|unclassified 0.00180326
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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15 COA-PWY-1: coenzyme A biosynthesis II (mammalian) 0.000795872
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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16 COA-PWY-1: coenzyme A biosynthesis II (mammalian)|g__Bacteroides.s__Bacteroides_vulgatus 0.000963748
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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17 PWY-6700: queuosine biosynthesis 0.000696312
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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18 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_dorei 0.00068396
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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19 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 0.000291624
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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20 PWY-7111: pyruvate fermentation to isobutanol (engineered) 0.000395699
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
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21 PWY-7111: pyruvate fermentation to isobutanol (engineered)|g__Bacteroides.s__Bacteroides_vulgatus 0.000476857
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
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22 VALSYN-PWY: L-valine biosynthesis 0.000395699
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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23 VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 0.000476857
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
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24 PWY-5695: urate biosynthesis/inosine 5'-phosphate degradation 0.000358864
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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25 PWY-5097: L-lysine biosynthesis VI 0.000333173
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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26 PWY-2942: L-lysine biosynthesis III 0.000316201
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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27 PWY-2942: L-lysine biosynthesis III|g__Bacteroides.s__Bacteroides_dorei 0.000358824
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
iuc
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28 PWY-7219: adenosine ribonucleotides de novo biosynthesis 0.000303519
e795ba0b91f4 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b46aa969c01b7e5f4f133192899fa4da286ecf89-dirty
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29 PWY-7219: adenosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_dorei 0.000250663