Mercurial > repos > iuc > humann2_split_stratified_table

diff humann2_split_stratified_table.xml @ 0:b58d3f965a49 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
author iuc
date Tue, 01 Aug 2017 07:58:41 -0400
parents
children 28763c8b43f8
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/humann2_split_stratified_table.xml	Tue Aug 01 07:58:41 2017 -0400
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+<tool id="humann2_split_stratified_table" name="Split stratified table" version="@WRAPPER_VERSION@.0">
+    <description></description>
+    <macros>
+        <import>humann2_macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
+    <expand macro="version"/>
+    <command detect_errors="exit_code"><![CDATA[
+humann2_split_stratified_table
+    --input '$input'
+    --output 'output'
+    ]]></command>
+    <inputs>
+        <param argument="--input" type="data" format="tsv,tabular,biom1" label="Stratified input table"/>
+    </inputs>
+    <outputs>
+        <data format="tsv" name="stratified" from_work_dir="output/*_stratified*" label="${tool.name} on ${on_string}: Stratified"/>
+        <data format="tsv" name="unstratified" from_work_dir="output/*_unstratified*" label="${tool.name} on ${on_string}: Unstratified"/>
+    </outputs>
+    <tests>
+        <test>
+            <param name="input" value="demo_genefamilies.tsv"/>
+            <output name="stratified" md5="308551b7ad06f6704d3dbb47db341089"/>
+            <output name="unstratified" md5="28a7254bd88afd42bdb4e41b6ae4253e"/>
+        </test>
+    </tests>
+    <help><![CDATA[
+@HELP_HEADER@
+
+This utility will split a table into two files (one stratified and one unstratified).
+    ]]></help>
+    <expand macro="citations"/>
+</tool>