Mercurial > repos > iuc > humann2_unpack_pathways

annotate test-data/joined_pathway_coverage_abundance.tsv @ 1:314c9501bc46 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2 commit 11ee7ac206d41894c0b6a11f2439aaea490824f0
author iuc
date Thu, 09 Nov 2017 13:44:22 -0500
parents d2e4fee96dd1
children
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d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
parents:
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1 # Pathway demo_Abundance demo_Coverage
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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2 COA-PWY-1: coenzyme A biosynthesis II (mammalian) 6.3694267516 0.7609346153
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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3 COA-PWY-1: coenzyme A biosynthesis II (mammalian)|g__Bacteroides.s__Bacteroides_vulgatus 4.7961630695 0.8557878872
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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4 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I 10.6471569863 0.9392767343
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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5 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I|unclassified 8.9740635174 0.5431316496
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
parents:
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6 PWY-2942: L-lysine biosynthesis III 2.5305778153 0.2651956314
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
parents:
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7 PWY-2942: L-lysine biosynthesis III|g__Bacteroides.s__Bacteroides_dorei 1.7857142857 0.4389950257
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
parents:
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8 PWY-5097: L-lysine biosynthesis VI 2.6664127226 0.2856160532
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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9 PWY-5423: oleoresin monoterpene volatiles biosynthesis 13.7815543238 0.9874950891
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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10 PWY-5423: oleoresin monoterpene volatiles biosynthesis|unclassified 13.7815543238 0.8805252394
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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11 PWY-5695: urate biosynthesis/inosine 5'-phosphate degradation 2.8720157961 0.3368670323
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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12 PWY-6305: putrescine biosynthesis IV 12.3568523173 0.9518375285
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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13 PWY-6305: putrescine biosynthesis IV|unclassified 12.3568523173 0.7234100116
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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14 PWY-6700: queuosine biosynthesis 5.5726434156 0.6918160989
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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15 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_dorei 3.4037771853 0.7183078347
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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16 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 1.4512868417 0.3826190602
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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17 PWY-7111: pyruvate fermentation to isobutanol (engineered) 3.1668118122 0.3826032161
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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18 PWY-7111: pyruvate fermentation to isobutanol (engineered)|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339 0.5877696572
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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19 PWY-7219: adenosine ribonucleotides de novo biosynthesis 2.4290890774 0.2181895299
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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20 PWY-7219: adenosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_dorei 1.2474418751 0.3040136356
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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21 PWY490-3: nitrate reduction VI (assimilatory) 10.9962495261 0.9568614047
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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22 PWY490-3: nitrate reduction VI (assimilatory)|unclassified 10.9962495261 0.7290147297
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
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23 UNINTEGRATED 6378.3363291102 1.0000000000
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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24 UNINTEGRATED|g__Bacteroides.s__Bacteroides_dorei 1957.0469180460 1.0000000000
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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25 UNINTEGRATED|g__Bacteroides.s__Bacteroides_vulgatus 2909.3950875399 1.0000000000
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
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26 UNINTEGRATED|unclassified 46.5907339353 1.0000000000
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
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27 UNMAPPED 1548.1865983490 1.0000000000
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
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28 VALSYN-PWY: L-valine biosynthesis 3.1668118122 0.3826032161
d2e4fee96dd1 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
iuc
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29 VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339 0.5877696572