Mercurial > repos > iuc > humann2_unpack_pathways
diff test-data/regrouped_gene_families_to_rxn.tsv @ 0:d2e4fee96dd1 draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
| author | iuc |
|---|---|
| date | Tue, 01 Aug 2017 07:56:57 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/regrouped_gene_families_to_rxn.tsv Tue Aug 01 07:56:57 2017 -0400 @@ -0,0 +1,1051 @@ +# Gene Family demo_Abundance-RPKs +UNMAPPED 4531.0 +UNGROUPED 17667.167 +UNGROUPED|g__Bacteroides.s__Bacteroides_dorei 10095.832 +UNGROUPED|g__Bacteroides.s__Bacteroides_vulgatus 7522.359 +UNGROUPED|unclassified 48.976 +1.1.1.271-RXN 2.045 +1.1.1.271-RXN|g__Bacteroides.s__Bacteroides_vulgatus 2.045 +1.2.7.8-RXN 3.953 +1.2.7.8-RXN|g__Bacteroides.s__Bacteroides_dorei 1.318 +1.2.7.8-RXN|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +1.3.1.9-RXN 5.27 +1.3.1.9-RXN|g__Bacteroides.s__Bacteroides_dorei 2.635 +1.3.1.9-RXN|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +1.5.1.20-RXN 7.018 +1.5.1.20-RXN|g__Bacteroides.s__Bacteroides_dorei 3.509 +1.5.1.20-RXN|g__Bacteroides.s__Bacteroides_vulgatus 3.509 +1.6.99.5-RXN 33.721 +1.6.99.5-RXN|g__Bacteroides.s__Bacteroides_dorei 11.804 +1.6.99.5-RXN|g__Bacteroides.s__Bacteroides_vulgatus 13.172 +1.6.99.5-RXN|unclassified 8.745 +1.7.7.2-RXN 8.889 +1.7.7.2-RXN|unclassified 8.889 +1.8.1.4-RXN 3.221 +1.8.1.4-RXN|g__Bacteroides.s__Bacteroides_dorei 1.61 +1.8.1.4-RXN|g__Bacteroides.s__Bacteroides_vulgatus 1.61 +2-DEHYDROPANTOATE-REDUCT-RXN 1.23 +2-DEHYDROPANTOATE-REDUCT-RXN|g__Bacteroides.s__Bacteroides_dorei 1.23 +2-ISOPROPYLMALATESYN-RXN 3.462 +2-ISOPROPYLMALATESYN-RXN|g__Bacteroides.s__Bacteroides_dorei 1.392 +2-ISOPROPYLMALATESYN-RXN|g__Bacteroides.s__Bacteroides_vulgatus 2.07 +2.3.1.179-RXN 7.712 +2.3.1.179-RXN|g__Bacteroides.s__Bacteroides_dorei 3.428 +2.3.1.179-RXN|g__Bacteroides.s__Bacteroides_vulgatus 4.284 +2.3.1.180-RXN 2.2 +2.3.1.180-RXN|g__Bacteroides.s__Bacteroides_dorei 1.1 +2.3.1.180-RXN|g__Bacteroides.s__Bacteroides_vulgatus 1.1 +2.5.1.64-RXN 2.54 +2.5.1.64-RXN|g__Bacteroides.s__Bacteroides_vulgatus 2.54 +2.6.1.37-RXN 6.061 +2.6.1.37-RXN|g__Bacteroides.s__Bacteroides_vulgatus 6.061 +2.7.7.33-RXN 4.405 +2.7.7.33-RXN|g__Bacteroides.s__Bacteroides_dorei 4.405 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3.49 +IMIDAZOLONEPROPIONASE-RXN|g__Bacteroides.s__Bacteroides_vulgatus 3.49 +IMP-DEHYDROG-RXN 2.905 +IMP-DEHYDROG-RXN|g__Bacteroides.s__Bacteroides_vulgatus 2.905 +INOPHOSPHOR-RXN 2.813 +INOPHOSPHOR-RXN|g__Bacteroides.s__Bacteroides_vulgatus 2.813 +ISOCITDEH-RXN 3.82 +ISOCITDEH-RXN|g__Bacteroides.s__Bacteroides_dorei 2.865 +ISOCITDEH-RXN|g__Bacteroides.s__Bacteroides_vulgatus 0.955 +KDO-8PSYNTH-RXN 8.743 +KDO-8PSYNTH-RXN|g__Bacteroides.s__Bacteroides_vulgatus 1.431 +KDO-8PSYNTH-RXN|unclassified 7.313 +KETOLACTOSE-RXN 6.884 +KETOLACTOSE-RXN|g__Bacteroides.s__Bacteroides_dorei 5.582 +KETOLACTOSE-RXN|g__Bacteroides.s__Bacteroides_vulgatus 1.302 +L-ASPARTATE-OXID-RXN 2.024 +L-ASPARTATE-OXID-RXN|g__Bacteroides.s__Bacteroides_dorei 1.35 +L-ASPARTATE-OXID-RXN|g__Bacteroides.s__Bacteroides_vulgatus 0.675 +LEUCINE--TRNA-LIGASE-RXN 0.731 +LEUCINE--TRNA-LIGASE-RXN|g__Bacteroides.s__Bacteroides_vulgatus 0.731 +LINOLENOYL-RXN 8.477 +LINOLENOYL-RXN|unclassified 8.477 +LYSINE--TRNA-LIGASE-RXN 3.676 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8.477 +RXN-16418 8.477 +RXN-16418|unclassified 8.477 +RXN-16620 5.27 +RXN-16620|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN-16620|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN-16624 5.27 +RXN-16624|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN-16624|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN-16628 5.27 +RXN-16628|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN-16628|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN-16632 5.27 +RXN-16632|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN-16632|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN-16637 4.301 +RXN-16637|g__Bacteroides.s__Bacteroides_vulgatus 4.301 +RXN-1961 2.488 +RXN-1961|g__Bacteroides.s__Bacteroides_dorei 0.829 +RXN-1961|g__Bacteroides.s__Bacteroides_vulgatus 1.658 +RXN-2102 10.24 +RXN-2102|g__Bacteroides.s__Bacteroides_dorei 5.869 +RXN-2102|g__Bacteroides.s__Bacteroides_vulgatus 4.372 +RXN-22 4.831 +RXN-22|g__Bacteroides.s__Bacteroides_dorei 2.415 +RXN-22|g__Bacteroides.s__Bacteroides_vulgatus 2.415 +RXN-5109 13.782 +RXN-5109|unclassified 13.782 +RXN-5110 13.782 +RXN-5110|unclassified 13.782 +RXN-5121 13.782 +RXN-5121|unclassified 13.782 +RXN-5841 2.963 +RXN-5841|g__Bacteroides.s__Bacteroides_dorei 2.963 +RXN-6724 12.722 +RXN-6724|unclassified 12.722 +RXN-7001 2.813 +RXN-7001|g__Bacteroides.s__Bacteroides_vulgatus 2.813 +RXN-7607 2.963 +RXN-7607|g__Bacteroides.s__Bacteroides_dorei 2.963 +RXN-7609 2.963 +RXN-7609|g__Bacteroides.s__Bacteroides_dorei 2.963 +RXN-7716 3.221 +RXN-7716|g__Bacteroides.s__Bacteroides_dorei 1.61 +RXN-7716|g__Bacteroides.s__Bacteroides_vulgatus 1.61 +RXN-7719 3.221 +RXN-7719|g__Bacteroides.s__Bacteroides_dorei 1.61 +RXN-7719|g__Bacteroides.s__Bacteroides_vulgatus 1.61 +RXN-7737 3.537 +RXN-7737|g__Bacteroides.s__Bacteroides_dorei 1.768 +RXN-7737|g__Bacteroides.s__Bacteroides_vulgatus 1.768 +RXN-7904 8.477 +RXN-7904|unclassified 8.477 +RXN-8001 2.538 +RXN-8001|g__Bacteroides.s__Bacteroides_vulgatus 2.538 +RXN-8391 7.712 +RXN-8391|g__Bacteroides.s__Bacteroides_dorei 3.428 +RXN-8391|g__Bacteroides.s__Bacteroides_vulgatus 4.284 +RXN-8629 3.221 +RXN-8629|g__Bacteroides.s__Bacteroides_dorei 1.61 +RXN-8629|g__Bacteroides.s__Bacteroides_vulgatus 1.61 +RXN-8764 4.711 +RXN-8764|g__Bacteroides.s__Bacteroides_dorei 3.534 +RXN-8764|g__Bacteroides.s__Bacteroides_vulgatus 1.178 +RXN-8976 8.721 +RXN-8976|g__Bacteroides.s__Bacteroides_dorei 5.814 +RXN-8976|g__Bacteroides.s__Bacteroides_vulgatus 2.907 +RXN-9190 2.525 +RXN-9190|g__Bacteroides.s__Bacteroides_vulgatus 2.525 +RXN-9191 6.26 +RXN-9191|g__Bacteroides.s__Bacteroides_dorei 4.695 +RXN-9191|g__Bacteroides.s__Bacteroides_vulgatus 1.565 +RXN-9204 2.525 +RXN-9204|g__Bacteroides.s__Bacteroides_vulgatus 2.525 +RXN-9205 6.26 +RXN-9205|g__Bacteroides.s__Bacteroides_dorei 4.695 +RXN-9205|g__Bacteroides.s__Bacteroides_vulgatus 1.565 +RXN-9217 2.525 +RXN-9217|g__Bacteroides.s__Bacteroides_vulgatus 2.525 +RXN-9220 6.26 +RXN-9220|g__Bacteroides.s__Bacteroides_dorei 4.695 +RXN-9220|g__Bacteroides.s__Bacteroides_vulgatus 1.565 +RXN-9358 2.525 +RXN-9358|g__Bacteroides.s__Bacteroides_vulgatus 2.525 +RXN-9359 2.525 +RXN-9359|g__Bacteroides.s__Bacteroides_vulgatus 2.525 +RXN-9360 2.525 +RXN-9360|g__Bacteroides.s__Bacteroides_vulgatus 2.525 +RXN-9361 6.26 +RXN-9361|g__Bacteroides.s__Bacteroides_dorei 4.695 +RXN-9361|g__Bacteroides.s__Bacteroides_vulgatus 1.565 +RXN-9362 6.26 +RXN-9362|g__Bacteroides.s__Bacteroides_dorei 4.695 +RXN-9362|g__Bacteroides.s__Bacteroides_vulgatus 1.565 +RXN-9363 6.26 +RXN-9363|g__Bacteroides.s__Bacteroides_dorei 4.695 +RXN-9363|g__Bacteroides.s__Bacteroides_vulgatus 1.565 +RXN-9365 2.525 +RXN-9365|g__Bacteroides.s__Bacteroides_vulgatus 2.525 +RXN-9366 6.26 +RXN-9366|g__Bacteroides.s__Bacteroides_dorei 4.695 +RXN-9366|g__Bacteroides.s__Bacteroides_vulgatus 1.565 +RXN-9558 5.27 +RXN-9558|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN-9558|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN-9623 8.477 +RXN-9623|unclassified 8.477 +RXN-9635 5.27 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2.635 +RXN-9673 8.477 +RXN-9673|unclassified 8.477 +RXN-9952 5.232 +RXN-9952|g__Bacteroides.s__Bacteroides_dorei 0.747 +RXN-9952|g__Bacteroides.s__Bacteroides_vulgatus 4.484 +RXN0-1132 3.221 +RXN0-1132|g__Bacteroides.s__Bacteroides_dorei 1.61 +RXN0-1132|g__Bacteroides.s__Bacteroides_vulgatus 1.61 +RXN0-1321 4.845 +RXN0-1321|g__Bacteroides.s__Bacteroides_dorei 3.876 +RXN0-1321|g__Bacteroides.s__Bacteroides_vulgatus 0.969 +RXN0-1342 7.906 +RXN0-1342|g__Bacteroides.s__Bacteroides_dorei 4.922 +RXN0-1342|g__Bacteroides.s__Bacteroides_vulgatus 2.984 +RXN0-2145 5.27 +RXN0-2145|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN0-2145|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN0-2584 3.546 +RXN0-2584|g__Bacteroides.s__Bacteroides_vulgatus 3.546 +RXN0-302 10.417 +RXN0-302|g__Bacteroides.s__Bacteroides_dorei 2.604 +RXN0-302|g__Bacteroides.s__Bacteroides_vulgatus 7.813 +RXN0-4022 5.602 +RXN0-4022|g__Bacteroides.s__Bacteroides_dorei 2.801 +RXN0-4022|g__Bacteroides.s__Bacteroides_vulgatus 2.801 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2.635 +RXN1G-285|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-299 5.27 +RXN1G-299|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-299|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-32 7.712 +RXN1G-32|g__Bacteroides.s__Bacteroides_dorei 3.428 +RXN1G-32|g__Bacteroides.s__Bacteroides_vulgatus 4.284 +RXN1G-334 7.712 +RXN1G-334|g__Bacteroides.s__Bacteroides_dorei 3.428 +RXN1G-334|g__Bacteroides.s__Bacteroides_vulgatus 4.284 +RXN1G-337 5.27 +RXN1G-337|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-337|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-339 5.27 +RXN1G-339|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-339|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-37 5.27 +RXN1G-37|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-37|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-374 7.712 +RXN1G-374|g__Bacteroides.s__Bacteroides_dorei 3.428 +RXN1G-374|g__Bacteroides.s__Bacteroides_vulgatus 4.284 +RXN1G-395 5.27 +RXN1G-395|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-395|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-396 5.27 +RXN1G-396|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-396|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-424 7.712 +RXN1G-424|g__Bacteroides.s__Bacteroides_dorei 3.428 +RXN1G-424|g__Bacteroides.s__Bacteroides_vulgatus 4.284 +RXN1G-468 5.27 +RXN1G-468|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-468|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-471 5.27 +RXN1G-471|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-471|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-488 5.27 +RXN1G-488|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-488|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-509 5.27 +RXN1G-509|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-509|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-526 5.27 +RXN1G-526|g__Bacteroides.s__Bacteroides_dorei 2.635 +RXN1G-526|g__Bacteroides.s__Bacteroides_vulgatus 2.635 +RXN1G-557 7.712 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