Mercurial > repos > iuc > humann2_unpack_pathways

diff test-data/relab_levelwise_renormalized_pathway_abundance.tsv @ 0:d2e4fee96dd1 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
author iuc
date Tue, 01 Aug 2017 07:56:57 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/relab_levelwise_renormalized_pathway_abundance.tsv	Tue Aug 01 07:56:57 2017 -0400
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+# Pathway	demo_Abundance
+UNMAPPED	0.193449
+UNINTEGRATED	0.796985
+UNINTEGRATED|g__Bacteroides.s__Bacteroides_vulgatus	0.584618
+UNINTEGRATED|g__Bacteroides.s__Bacteroides_dorei	0.393252
+UNINTEGRATED|unclassified	0.00936201
+PWY-5423: oleoresin monoterpene volatiles biosynthesis	0.00172203
+PWY-5423: oleoresin monoterpene volatiles biosynthesis|unclassified	0.00276929
+PWY-6305: putrescine biosynthesis IV	0.00154401
+PWY-6305: putrescine biosynthesis IV|unclassified	0.002483
+PWY490-3: nitrate reduction VI (assimilatory)	0.001374
+PWY490-3: nitrate reduction VI (assimilatory)|unclassified	0.0022096
+PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I	0.00133038
+PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I|unclassified	0.00180326
+COA-PWY-1: coenzyme A biosynthesis II (mammalian)	0.000795872
+COA-PWY-1: coenzyme A biosynthesis II (mammalian)|g__Bacteroides.s__Bacteroides_vulgatus	0.000963748
+PWY-6700: queuosine biosynthesis	0.000696312
+PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_dorei	0.00068396
+PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus	0.000291624
+PWY-7111: pyruvate fermentation to isobutanol (engineered)	0.000395699
+PWY-7111: pyruvate fermentation to isobutanol (engineered)|g__Bacteroides.s__Bacteroides_vulgatus	0.000476857
+VALSYN-PWY: L-valine biosynthesis	0.000395699
+VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus	0.000476857
+PWY-5695: urate biosynthesis/inosine 5'-phosphate degradation	0.000358864
+PWY-5097: L-lysine biosynthesis VI	0.000333173
+PWY-2942: L-lysine biosynthesis III	0.000316201
+PWY-2942: L-lysine biosynthesis III|g__Bacteroides.s__Bacteroides_dorei	0.000358824
+PWY-7219: adenosine ribonucleotides de novo biosynthesis	0.000303519
+PWY-7219: adenosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_dorei	0.000250663