
C4 Alignment:
------------
         Query: NZ874 single_hit
        Target: NZ874 Joins between unique SPAdes contigs are separated by 10 "N" characters
         Model: protein2genome:local
     Raw score: 2125
   Query range: 0 -> 434
  Target range: 199 -> 2155

    1 : MetAlaGlnThrProLeuHisMetSerAlaGlyAsnAsnArgAlaGluIleValLysPheLe :   21
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        MetAlaGlnThrProLeuHisMetSerAlaGlyAsnAsnArgAlaGluIleValLysPheLe
  200 : ATGGCACAGACCCCACTCCACATGTCTGCTGGCAACAACAGGGCTGAAATAGTTAAGTTTCT :  260

   22 : uLeuGluIleProGlyProGluLysValGluLeuGluAlaLysAsnMet  >>>> Target :   38
        |||||||||||||||||||||||||||||||||||||||||||||||||            1
        uLeuGluIleProGlyProGluLysValGluLeuGluAlaLysAsnMet++           
  261 : TCTTGAAATTCCAGGGCCAGAGAAGGTTGAGTTGGAGGCCAAGAACATGgt........... :  313

   39 :  Intron 1 >>>>  TyrGlyGluThrProLeuHisMetAlaAlaLysAsnGlyCysAsnA :   53
        58 bp           ||||||||||||||||||||||||||||||||||||||||||||||
                      ++TyrGlyGluThrProLeuHisMetAlaAlaLysAsnGlyCysAsnA
  314 : ..............agTATGGAGAAACTCCTTTGCACATGGCGGCAAAAAATGGGTGCAATG :  514

   54 : spAlaAlaArgLeuLeuLeuAlaHisGlyAlaPhePheGluAlaLysAlaAsn  >>>> Ta :   71
        |||||||||||||||||||||||||||||||||||||||||||||||||||||         
        spAlaAlaArgLeuLeuLeuAlaHisGlyAlaPhePheGluAlaLysAlaAsn++       
  515 : ATGCTGCACGGTTGCTTCTTGCTCATGGTGCTTTTTTTGAAGCCAAAGCAAATgt....... :  570

   72 : rget Intron 2 >>>>  AsnGlyMetThrProLeuHisLeuAlaValTrpTyrSerLeu :   84
           106 bp           ||||||||||||||||||||||||||||||||||||||||||
                          ++AsnGlyMetThrProLeuHisLeuAlaValTrpTyrSerLeu
  571 : ..................agAATGGGATGACACCACTACACCTTGCTGTCTGGTATTCACTC :  713

   85 : HisSerGluAspIleSerThrValLysThrLeuLeuGluTyrAsnAlaAspCysSerAlaGl :  105
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        HisSerGluAspIleSerThrValLysThrLeuLeuGluTyrAsnAlaAspCysSerAlaGl
  714 : CATTCAGAAGACATCTCAACTGTAAAGACGTTGCTCGAGTACAATGCTGATTGCAGTGCAGA :  776

  106 : uAspAsn  >>>> Target Intron 3 >>>>  GluGlyMetThrProLeuAsnHisLe :  116
        |||||||            85 bp            ||||||||||||||||||||||||||
        uAspAsn++                         ++GluGlyMetThrProLeuAsnHisLe
  777 : GGACAATgt.........................agGAGGGAATGACTCCTCTAAACCATCT :  894

  117 : uSerLysGlyProGlySerGluLysLeuArgGluLeuLeuPheTrpHisLeuGluGluGlnA :  137
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        uSerLysGlyProGlySerGluLysLeuArgGluLeuLeuPheTrpHisLeuGluGluGlnA
  895 : GTCAAAAGGCCCTGGTAGTGAAAAGTTGAGGGAATTGTTATTCTGGCACCTTGAAGAGCAGA :  957

  138 : rgLysArgArgAlaIleGluAlaCysSerGluThrLysAlaLysMetAspGluLeuGluAsn :  157
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        rgLysArgArgAlaIleGluAlaCysSerGluThrLysAlaLysMetAspGluLeuGluAsn
  958 : GAAAGAGGAGAGCTATTGAAGCATGCAGTGAAACTAAAGCTAAGATGGATGAACTTGAAAAT : 1017

  158 : GluLeuSerAsnIleValGlyLeuAsnGluLeuLysIleGlnLeuArgLysTrpAlaArgGl :  178
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        GluLeuSerAsnIleValGlyLeuAsnGluLeuLysIleGlnLeuArgLysTrpAlaArgGl
 1018 : GAGTTATCAAACATAGTAGGCTTGAATGAGCTCAAAATACAATTACGGAAATGGGCAAGGGG : 1080

  179 : yMetLeuLeuAspGluArgArgArgAlaLeuGlyLeuLysValGlyThrArgArgProProH :  199
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        yMetLeuLeuAspGluArgArgArgAlaLeuGlyLeuLysValGlyThrArgArgProProH
 1081 : AATGCTTTTGGATGAGAGGCGTAGGGCACTTGGTCTAAAAGTTGGCACCCGAAGACCACCTC : 1143

  200 : isMetAlaPheLeuGlyAsnProGlyThr{G}  >>>> Target Intron 4 >>>>  { :  209
        |||||||||||||||||||||||||||||{|}            199 bp           {
        isMetAlaPheLeuGlyAsnProGlyThr{G}++                         ++{
 1144 : ATATGGCCTTCCTTGGCAACCCCGGAACA{G}gt.........................ag{ : 1373

  210 : ly}LysThrMetValAlaArgIleLeuGlyLysLeuLeuHisMetValGlyIleIleProTh :  229
        ||}|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        ly}LysThrMetValAlaArgIleLeuGlyLysLeuLeuHisMetValGlyIleIleProTh
 1374 : GT}AAGACCATGGTAGCCCGCATTCTTGGAAAACTACTCCATATGGTGGGAATTATACCTAC : 1432

  230 : rAspLysValThrGluValGlnArgThrAspLeuValGlyGluPheValGlyHisThrGlyP :  250
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        rAspLysValThrGluValGlnArgThrAspLeuValGlyGluPheValGlyHisThrGlyP
 1433 : TGACAAGGTAACAGAAGTACAGCGGACTGATTTGGTTGGAGAATTTGTTGGTCATACTGGGC : 1495

  251 : roLysThrArgArgLys  >>>> Target Intron 5 >>>>  IleLysAspAlaGluG :  261
        |||||||||||||||||            106 bp           ||||||||||||||||
        roLysThrArgArgLys++                         ++IleLysAspAlaGluG
 1496 : CAAAGACTAGGAGAAAGgt.........................agATTAAAGACGCCGAGG : 1634

  262 : lyGlyIleLeuPheValAspGluAlaTyrArgLeuIleProMetGlnLysAlaAspAspLys :  281
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        lyGlyIleLeuPheValAspGluAlaTyrArgLeuIleProMetGlnLysAlaAspAspLys
 1635 : GAGGAATTCTATTTGTGGACGAAGCATACCGACTGATACCGATGCAGAAGGCAGATGATAAG : 1694

  282 : AspTyrGlyLeuGluAlaLeuGluGluIleMetSerValMetAspSerGlyLysIleValVa :  302
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        AspTyrGlyLeuGluAlaLeuGluGluIleMetSerValMetAspSerGlyLysIleValVa
 1695 : GACTATGGTTTGGAAGCATTAGAAGAAATCATGTCGGTTATGGACAGCGGAAAAATAGTGGT : 1757

  303 : lIlePheAlaGlyTyrSerGluProMetLysArgValIleAlaSerAsnGluGlyPheCysA :  323
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        lIlePheAlaGlyTyrSerGluProMetLysArgValIleAlaSerAsnGluGlyPheCysA
 1758 : CATATTTGCTGGGTACAGTGAGCCAATGAAACGTGTAATTGCTTCAAATGAAGGCTTCTGCA : 1820

  324 : rgArgValThrLysPhePheHisPheAsnAspPheAsnSerGluGluLeuAlaThrIleLeu :  343
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        rgArgValThrLysPhePheHisPheAsnAspPheAsnSerGluGluLeuAlaThrIleLeu
 1821 : GAAGGGTGACCAAGTTTTTCCACTTCAATGACTTCAATTCGGAAGAGTTGGCCACTATTCTC : 1880

  344 : HisIleLysMetAsnAsnGlnThrGluAspSerLeuLeuTyrGlyPheLysLeuHisSerSe :  364
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        HisIleLysMetAsnAsnGlnThrGluAspSerLeuLeuTyrGlyPheLysLeuHisSerSe
 1881 : CATATAAAGATGAACAACCAAACAGAGGACAGCTTATTGTACGGGTTTAAGTTGCATTCTTC : 1943

  365 : rCysThrValGluAlaValAlaGlyLeuIleGlnArgGluThrThrGluLysGlnArgArgG :  385
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        rCysThrValGluAlaValAlaGlyLeuIleGlnArgGluThrThrGluLysGlnArgArgG
 1944 : CTGCACTGTAGAAGCTGTTGCGGGACTTATACAGAGAGAGACAACCGAAAAGCAGCGTAGGG : 2006

  386 : luMetAsnGlyGlyLeuValAspProMetLeuValAsnAlaArgGluAsnLeuAspLeuArg :  405
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        luMetAsnGlyGlyLeuValAspProMetLeuValAsnAlaArgGluAsnLeuAspLeuArg
 2007 : AGATGAATGGAGGTTTAGTTGACCCAATGCTAGTGAATGCCAGAGAAAACTTGGATCTCAGG : 2066

  406 : LeuSerPheAspCysIleAspThrGluGluLeuArgThrIleThrLeuGluAspLeuGluAl :  426
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
        LeuSerPheAspCysIleAspThrGluGluLeuArgThrIleThrLeuGluAspLeuGluAl
 2067 : CTCAGCTTTGACTGCATAGACACCGAAGAACTACGGACGATTACCCTAGAGGATTTAGAAGC : 2129

  427 : aGlyIleGlnIleLeuSerGln*** :  434
        |||||||||||||||||||||||||
        aGlyIleGlnIleLeuSerGln***
 2130 : AGGAATTCAGATTTTATCGCAATGA : 2155

# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.4.0
##date 2023-09-06
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
NZ874	exonerate:protein2genome:local	gene	200	2155	2125	+	.	gene_id 1 ; sequence NZ874 ; gene_orientation + ; identity 100.00 ; similarity 100.00
NZ874	exonerate:protein2genome:local	cds	200	310	.	+	.	
NZ874	exonerate:protein2genome:local	exon	200	310	.	+	.	insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00
NZ874	exonerate:protein2genome:local	splice5	311	312	.	+	.	intron_id 1 ; splice_site "GT"
NZ874	exonerate:protein2genome:local	intron	311	468	.	+	.	intron_id 1
NZ874	exonerate:protein2genome:local	splice3	467	468	.	+	.	intron_id 0 ; splice_site "AG"
NZ874	exonerate:protein2genome:local	cds	469	567	.	+	.	
NZ874	exonerate:protein2genome:local	exon	469	567	.	+	.	insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00
NZ874	exonerate:protein2genome:local	splice5	568	569	.	+	.	intron_id 2 ; splice_site "GT"
NZ874	exonerate:protein2genome:local	intron	568	673	.	+	.	intron_id 2
NZ874	exonerate:protein2genome:local	splice3	672	673	.	+	.	intron_id 1 ; splice_site "AG"
NZ874	exonerate:protein2genome:local	cds	674	784	.	+	.	
NZ874	exonerate:protein2genome:local	exon	674	784	.	+	.	insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00
NZ874	exonerate:protein2genome:local	splice5	785	786	.	+	.	intron_id 3 ; splice_site "GT"
NZ874	exonerate:protein2genome:local	intron	785	869	.	+	.	intron_id 3
NZ874	exonerate:protein2genome:local	splice3	868	869	.	+	.	intron_id 2 ; splice_site "AG"
NZ874	exonerate:protein2genome:local	cds	870	1173	.	+	.	
NZ874	exonerate:protein2genome:local	exon	870	1173	.	+	.	insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00
NZ874	exonerate:protein2genome:local	splice5	1174	1175	.	+	.	intron_id 4 ; splice_site "GT"
NZ874	exonerate:protein2genome:local	intron	1174	1372	.	+	.	intron_id 4
NZ874	exonerate:protein2genome:local	splice3	1371	1372	.	+	.	intron_id 3 ; splice_site "AG"
NZ874	exonerate:protein2genome:local	cds	1373	1512	.	+	.	
NZ874	exonerate:protein2genome:local	exon	1373	1512	.	+	.	insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00
NZ874	exonerate:protein2genome:local	splice5	1513	1514	.	+	.	intron_id 5 ; splice_site "GT"
NZ874	exonerate:protein2genome:local	intron	1513	1618	.	+	.	intron_id 5
NZ874	exonerate:protein2genome:local	splice3	1617	1618	.	+	.	intron_id 4 ; splice_site "AG"
NZ874	exonerate:protein2genome:local	cds	1619	2155	.	+	.	
NZ874	exonerate:protein2genome:local	exon	1619	2155	.	+	.	insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00
NZ874	exonerate:protein2genome:local	similarity	200	2155	2125	+	.	alignment_id 1 ; Query NZ874 ; Align 200 1 111 ; Align 469 38 99 ; Align 674 71 111 ; Align 870 108 303 ; Align 1375 210 138 ; Align 1619 256 537
# --- END OF GFF DUMP ---
#
