Mercurial > repos > iuc > hyphy_fade
annotate test-data/absrel-out1.json @ 33:a73fff151e38 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 821e0f3e4546bc55e093ab63bd9f9b57f2bf772d
author | iuc |
---|---|
date | Thu, 18 Aug 2022 14:04:52 +0000 |
parents | a4398cfa8792 |
children |
rev | line source |
---|---|
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
1 { |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
2 "analysis":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
3 "authors":"Sergei L Kosakovsky Pond, Ben Murrell, Steven Weaver and Temple iGEM / UCSD viral evolution group", |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
4 "citation":"Less Is More: An Adaptive Branch-Site Random Effects Model for Efficient Detection of Episodic Diversifying Selection (2015). Mol Biol Evol 32 (5): 1342-1353. v2.2 adds support for multiple-hit models", |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
5 "contact":"spond@temple.edu", |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
6 "info":"aBSREL (Adaptive branch-site random effects likelihood)\n uses an adaptive random effects branch-site model framework\n to test whether each branch has evolved under positive selection,\n using a procedure which infers an optimal number of rate categories per branch.", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
7 "requirements":"in-frame codon alignment and a phylogenetic tree", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
8 "version":"2.2" |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
9 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
10 "branch attributes":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
11 "0":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
12 "Baboon":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
13 "Baseline MG94xREV":0.001816807585564731, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
14 "Baseline MG94xREV omega ratio":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
15 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
16 "Full adaptive model":0.001810407118394509, |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
17 "LRT":0, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
18 "Nucleotide GTR":0.001678881906620672, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
19 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
20 [0, 1] |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
21 ], |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
22 "Rate classes":1, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
23 "Uncorrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
24 "original name":"Baboon", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
25 "rate at which 2 nucleotides are changed instantly within a single codon":0 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
26 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
27 "Cat":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
28 "Baseline MG94xREV":0.2286001363527903, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
29 "Baseline MG94xREV omega ratio":1.403298474422089, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
30 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
31 "Full adaptive model":0.1219386838393392, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
32 "LRT":1.644967676056694, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
33 "Nucleotide GTR":0.265904547400163, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
34 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
35 [0.2130519766306851, 0.6352283641519592], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
36 [2.628217450705319, 0.3647716358480408] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
37 ], |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
38 "Rate classes":2, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
39 "Uncorrected P-value":0.171730764045231, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
40 "original name":"Cat", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
41 "rate at which 2 nucleotides are changed instantly within a single codon":0 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
42 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
43 "Chimp":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
44 "Baseline MG94xREV":0.001840311209746262, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
45 "Baseline MG94xREV omega ratio":10000000000, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
46 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
47 "Full adaptive model":0.001841979303044237, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
48 "LRT":0.6159123786974305, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
49 "Nucleotide GTR":0.001816713800925801, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
50 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
51 [10000000000, 1] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
52 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
53 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
54 "Uncorrected P-value":0.3069983227523322, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
55 "original name":"Chimp", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
56 "rate at which 2 nucleotides are changed instantly within a single codon":0 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
57 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
58 "Cow":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
59 "Baseline MG94xREV":0.2070244948790512, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
60 "Baseline MG94xREV omega ratio":2.153434974462683, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
61 "Corrected P-value":0.5006146299996015, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
62 "Full adaptive model":0.1241125417707662, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
63 "LRT":4.898194538953248, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
64 "Nucleotide GTR":0.2481512612523618, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
65 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
66 [0, 0.52318726440949], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
67 [2.444056517734385, 0.47681273559051] |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
68 ], |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
69 "Rate classes":2, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
70 "Uncorrected P-value":0.03128841437497509, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
71 "original name":"Cow", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
72 "rate at which 2 nucleotides are changed instantly within a single codon":0 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
73 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
74 "Horse":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
75 "Baseline MG94xREV":0.190365915457708, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
76 "Baseline MG94xREV omega ratio":1.182933895494305, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
77 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
78 "Full adaptive model":0.0869489794025302, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
79 "LRT":2.047309801283518, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
80 "Nucleotide GTR":0.2090927256979082, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
81 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
82 [0, 0.5397658078247131], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
83 [1.633257246666139, 0.4602341921752869] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
84 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
85 "Rate classes":2, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
86 "Uncorrected P-value":0.1382789032066179, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
87 "original name":"Horse", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
88 "rate at which 2 nucleotides are changed instantly within a single codon":0 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
89 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
90 "Human":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
91 "Baseline MG94xREV":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
92 "Baseline MG94xREV omega ratio":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
93 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
94 "Full adaptive model":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
95 "LRT":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
96 "Nucleotide GTR":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
97 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
98 [1, 1] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
99 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
100 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
101 "Uncorrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
102 "original name":"Human", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
103 "rate at which 2 nucleotides are changed instantly within a single codon":0.0006106118725184574 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
104 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
105 "Mouse":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
106 "Baseline MG94xREV":0.1083167307250788, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
107 "Baseline MG94xREV omega ratio":0.5108576904540283, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
108 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
109 "Full adaptive model":0.1078010043714489, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
110 "LRT":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
111 "Nucleotide GTR":0.1181001275359051, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
112 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
113 [0.5087375113796073, 1] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
114 ], |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
115 "Rate classes":1, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
116 "Uncorrected P-value":1, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
117 "original name":"Mouse", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
118 "rate at which 2 nucleotides are changed instantly within a single codon":0.4244832903005548 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
119 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
120 "Node1":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
121 "Baseline MG94xREV":0.2542393300501047, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
122 "Baseline MG94xREV omega ratio":0.2997498382776075, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
123 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
124 "Full adaptive model":0.2550466752020236, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
125 "LRT":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
126 "Nucleotide GTR":0.2767426965701868, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
127 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
128 [0.2932817609633239, 1] |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
129 ], |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
130 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
131 "Uncorrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
132 "rate at which 2 nucleotides are changed instantly within a single codon":0.9114373463003921 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
133 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
134 "Node12":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
135 "Baseline MG94xREV":0.01400815185374474, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
136 "Baseline MG94xREV omega ratio":0.2754467062829232, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
137 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
138 "Full adaptive model":0.01437973904273591, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
139 "LRT":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
140 "Nucleotide GTR":0.01784721909304638, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
141 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
142 [0.3037614070859027, 1] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
143 ], |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
144 "Rate classes":1, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
145 "Uncorrected P-value":1, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
146 "rate at which 2 nucleotides are changed instantly within a single codon":0.5084909616267814 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
147 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
148 "Node2":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
149 "Baseline MG94xREV":0.0400106272595141, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
150 "Baseline MG94xREV omega ratio":0.116408812566168, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
151 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
152 "Full adaptive model":0.03991940069030483, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
153 "LRT":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
154 "Nucleotide GTR":0.06613304839358287, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
155 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
156 [0.1193993042178124, 1] |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
157 ], |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
158 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
159 "Uncorrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
160 "rate at which 2 nucleotides are changed instantly within a single codon":9.28646275825122 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
161 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
162 "Node3":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
163 "Baseline MG94xREV":0.08548068002443369, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
164 "Baseline MG94xREV omega ratio":1.293385437932658, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
165 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
166 "Full adaptive model":0.08590119038008139, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
167 "LRT":0.1383887036890883, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
168 "Nucleotide GTR":0.09881178513658169, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
169 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
170 [1.330576641567385, 1] |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
171 ], |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
172 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
173 "Uncorrected P-value":0.4219212196398351, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
174 "rate at which 2 nucleotides are changed instantly within a single codon":0.8390789546113498 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
175 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
176 "Node8":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
177 "Baseline MG94xREV":0.09463393920061362, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
178 "Baseline MG94xREV omega ratio":1.862136443854597, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
179 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
180 "Full adaptive model":0.0958035263641453, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
181 "LRT":0.7150293976401372, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
182 "Nucleotide GTR":0.1062333225692588, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
183 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
184 [1.883870769808856, 1] |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
185 ], |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
186 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
187 "Uncorrected P-value":0.2893795680778183, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
188 "rate at which 2 nucleotides are changed instantly within a single codon":0.512238843416092 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
189 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
190 "Node9":{ |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
191 "Baseline MG94xREV":0.02846111726225027, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
192 "Baseline MG94xREV omega ratio":0.4321055128385307, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
193 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
194 "Full adaptive model":0.02810856974543091, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
195 "LRT":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
196 "Nucleotide GTR":0.02566185438854229, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
197 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
198 [0.4185836885800617, 1] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
199 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
200 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
201 "Uncorrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
202 "rate at which 2 nucleotides are changed instantly within a single codon":0 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
203 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
204 "Pig":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
205 "Baseline MG94xREV":0.1782835053555321, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
206 "Baseline MG94xREV omega ratio":1.275728452678247, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
207 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
208 "Full adaptive model":0.1729188354138871, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
209 "LRT":0.3324036585026988, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
210 "Nucleotide GTR":0.1871760137183495, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
211 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
212 [1.235108129487059, 1] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
213 ], |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
214 "Rate classes":1, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
215 "Uncorrected P-value":0.3669120164240152, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
216 "original name":"Pig", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
217 "rate at which 2 nucleotides are changed instantly within a single codon":0.1143447431158695 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
218 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
219 "Rat":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
220 "Baseline MG94xREV":0.06315403896300904, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
221 "Baseline MG94xREV omega ratio":0.8744850915248316, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
222 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
223 "Full adaptive model":0.06408078523886611, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
224 "LRT":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
225 "Nucleotide GTR":0.0666364425850592, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
226 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
227 [0.8782045320352186, 1] |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
228 ], |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
229 "Rate classes":1, |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
230 "Uncorrected P-value":1, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
231 "original name":"Rat", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
232 "rate at which 2 nucleotides are changed instantly within a single codon":0.1346164190615118 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
233 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
234 "RhMonkey":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
235 "Baseline MG94xREV":0.003671939837747083, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
236 "Baseline MG94xREV omega ratio":10000000000, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
237 "Corrected P-value":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
238 "Full adaptive model":0.003675047654636179, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
239 "LRT":1.165062770327495, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
240 "Nucleotide GTR":0.003777016173741061, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
241 "Rate Distributions": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
242 [10000000000, 1] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
243 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
244 "Rate classes":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
245 "Uncorrected P-value":0.2236284592802686, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
246 "original name":"RhMonkey", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
247 "rate at which 2 nucleotides are changed instantly within a single codon":0 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
248 } |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
249 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
250 "attributes":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
251 "Baseline MG94xREV":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
252 "attribute type":"branch length", |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
253 "display order":1 |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
254 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
255 "Baseline MG94xREV omega ratio":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
256 "attribute type":"branch label", |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
257 "display order":1 |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
258 }, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
259 "Corrected P-value":{ |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
260 "attribute type":"branch label", |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
261 "display order":6 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
262 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
263 "Full adaptive model":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
264 "attribute type":"branch length", |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
265 "display order":2 |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
266 }, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
267 "LRT":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
268 "attribute type":"branch label", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
269 "display order":4 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
270 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
271 "Nucleotide GTR":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
272 "attribute type":"branch length", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
273 "display order":0 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
274 }, |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
275 "Rate Distributions":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
276 "attribute type":"branch label", |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
277 "display order":3 |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
278 }, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
279 "Rate classes":{ |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
280 "attribute type":"branch label", |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
281 "display order":2 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
282 }, |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
283 "Uncorrected P-value":{ |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
284 "attribute type":"branch label", |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
285 "display order":5 |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
286 }, |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
287 "original name":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
288 "attribute type":"node label", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
289 "display order":-1 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
290 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
291 "rate at which 2 nucleotides are changed instantly within a single codon":{ |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
292 "attribute type":"branch label", |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
293 "display order":7 |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
294 } |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
295 } |
15
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
296 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
297 "data partitions":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
298 "0":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
299 "coverage": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
300 [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
301 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
302 "name":"absrel.filter.default" |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
303 } |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
304 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
305 "fits":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
306 "Baseline MG94xREV":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
307 "AIC-c":6983.763305606333, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
308 "Equilibrium frequencies": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
309 [0.04875339327772683], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
310 [0.03982858547830345], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
311 [0.04946803524790992], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
312 [0.04152216138298744], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
313 [0.01811683453600613], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
314 [0.01480036248560469], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
315 [0.0183823965708893], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
316 [0.01542969784826435], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
317 [0.01894694796506697], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
318 [0.01547851515238824], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
319 [0.01922467805342367], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
320 [0.01613668666381816], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
321 [0.02832099415740372], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
322 [0.02313654621336914], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
323 [0.02873613184734657], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
324 [0.02412034959764736], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
325 [0.01662182431200483], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
326 [0.01357902918971745], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
327 [0.01686547203528639], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
328 [0.01415643148428886], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
329 [0.006176695005242439], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
330 [0.005045987744654046], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
331 [0.006267234867003878], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
332 [0.005260551308914496], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
333 [0.006459711194459957], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
334 [0.005277194922783805], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
335 [0.006554399593040238], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
336 [0.005501589790395056], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
337 [0.009655668202293983], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
338 [0.007888099278638223], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
339 [0.009797203904398108], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
340 [0.008223514024394991], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
341 [0.03326722643528176], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
342 [0.02717732003095303], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
343 [0.03375486749252685], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
344 [0.02833294365668738], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
345 [0.01236215156074466], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
346 [0.01009913314808799], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
347 [0.01254335971371867], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
348 [0.01052856463184265], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
349 [0.01292858539344675], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
350 [0.0105618754683007], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
351 [0.0131180965046964], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
352 [0.01101098350431497], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
353 [0.0193250328267319], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
354 [0.01578738770911659], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
355 [0.0196083049972345], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
356 [0.01645869298147252], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
357 [0.01962343746171723], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
358 [0.02045785777700414], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
359 [0.008926115885166477], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
360 [0.007292098982657142], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
361 [0.009056957588961733], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
362 [0.007602170831388156], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
363 [0.007626222986467745], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
364 [0.009471947420992787], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
365 [0.007950502328516303], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
366 [0.01395367801862353], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
367 [0.01139931439306339], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
368 [0.01415821524731906], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
369 [0.01188403168729233] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
370 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
371 "Log Likelihood":-3427.720059001285, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
372 "Rate Distributions":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
373 "Per-branch delta":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
374 "2.5%":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
375 "97.5%":12.07373117808175, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
376 "Mean":1.277646334033236, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
377 "Median":0.4551223038316586 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
378 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
379 "Per-branch omega":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
380 "2.5%":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
381 "97.5%":2.153434974462683, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
382 "Mean":666666667.5119981, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
383 "Median":1 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
384 } |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
385 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
386 "display order":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
387 "estimated parameters":62 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
388 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
389 "Full adaptive model":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
390 "AIC-c":6972.859938351839, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
391 "Log Likelihood":-3415.824749853321, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
392 "Rate Distributions":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
393 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
394 "display order":2, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
395 "estimated parameters":68 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
396 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
397 "Nucleotide GTR":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
398 "AIC-c":7112.857317645923, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
399 "Equilibrium frequencies": [ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
400 [0.3592490842490842], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
401 [0.181959706959707], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
402 [0.240018315018315], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
403 [0.2187728937728937] |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
404 ], |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
405 "Log Likelihood":-3532.321228205235, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
406 "Rate Distributions":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
407 "Substitution rate from nucleotide A to nucleotide C":0.5498703043473002, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
408 "Substitution rate from nucleotide A to nucleotide G":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
409 "Substitution rate from nucleotide A to nucleotide T":0.2646979624678532, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
410 "Substitution rate from nucleotide C to nucleotide G":0.4921328068285813, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
411 "Substitution rate from nucleotide C to nucleotide T":1.028960084526602, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
412 "Substitution rate from nucleotide G to nucleotide T":0.3044365000595399 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
413 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
414 "display order":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
415 "estimated parameters":24 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
416 } |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
417 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
418 "input":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
419 "file name":"/tmp/tmpx_42i6f0/job_working_directory/000/6/working/./absrel_input.fa", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
420 "number of sequences":10, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
421 "number of sites":187, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
422 "partition count":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
423 "trees":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
424 "0":"((((Pig:0.147969,Cow:0.21343)Node3:0.08509899999999999,Horse:0.165787,Cat:0.264806)Node2:0.058611,((RhMonkey:0.002015,Baboon:0.003108)Node9:0.022733,(Human:0.004349,Chimp:0.000799)Node12:0.011873)Node8:0.101856)Node1:0.340802,Rat:0.050958,Mouse:0.09795)" |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
425 } |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
426 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
427 "test results":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
428 "P-value threshold":0.05, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
429 "positive test results":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
430 "tested":16 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
431 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
432 "tested":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
433 "0":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
434 "Baboon":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
435 "Cat":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
436 "Chimp":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
437 "Cow":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
438 "Horse":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
439 "Human":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
440 "Mouse":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
441 "Node1":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
442 "Node12":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
443 "Node2":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
444 "Node3":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
445 "Node8":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
446 "Node9":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
447 "Pig":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
448 "Rat":"test", |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
449 "RhMonkey":"test" |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
450 } |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
451 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
452 "timers":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
453 "Baseline model fitting":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
454 "order":2, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
455 "timer":17 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
456 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
457 "Complexity analysis":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
458 "order":3, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
459 "timer":110 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
460 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
461 "Full adaptive model fitting":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
462 "order":4, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
463 "timer":20 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
464 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
465 "Overall":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
466 "order":0, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
467 "timer":259 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
468 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
469 "Preliminary model fitting":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
470 "order":1, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
471 "timer":0 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
472 }, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
473 "Testing for selection":{ |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
474 "order":5, |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
475 "timer":112 |
a4398cfa8792
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 7868bb22136a87ff5120042ce90bc6be87d57d80"
iuc
parents:
0
diff
changeset
|
476 } |
0
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
477 } |
6164d9298db9
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2c7a7ff8a55e7584e84335baa3159a63ce7a590c"
iuc
parents:
diff
changeset
|
478 } |