Mercurial > repos > iuc > hyphy_fade

comparison test-data/busted-out2-1.json @ 34:cf51d3630757 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e7a89841d59689e87db592e112f9c8fb5331d954
author iuc
date Thu, 02 Mar 2023 15:09:08 +0000
parents a73fff151e38
children
comparison
equal deleted inserted replaced
33:a73fff151e38 34:cf51d3630757
1 {
2 "Evidence Ratios":{
3 "constrained": [
4 [0.9923402064246108, 0.9931062434543886, 0.9924143522123878, 0.9923806778416975, 0.9931062434543886, 0.9931472643200557, 0.9926477905890503, 0.9927770719239265, 0.9925333152392071, 0.9927770719239265, 0.9934702178721884, 0.9943672356427694, 0.9934310695695089, 0.9925333152392071, 0.9924430461178078, 0.9926389443188771, 0.9929336452766124, 0.992205754049072, 0.9925333152392071, 0.9934702178721884, 0.9928933056224403, 0.9934702178721884, 0.9932730568068178, 0.9932283919959691, 0.992533339256682, 0.9942200873476073, 0.9925611908926516, 0.9931448487922603, 0.9939853880387395, 0.9934702178721884, 0.99293384770743, 0.9934702178721884, 0.9925179551267049, 0.9943679446048819, 0.9927773049889533, 0.9931443273636676, 0.9931062434543886, 0.9925134341549778, 0.9925611909005787, 0.9931473014288434, 0.9926389443198911, 0.9931443273636676, 0.9934310695695089, 0.9931443273636676, 0.9924780389922671, 0.9934702178721884, 0.9931062434543886, 0.9932804150557601, 0.9934726274784342, 0.9931062434543886, 0.9924219863349872, 0.9923806778416975, 0.9931443273636676, 0.9931435821987634, 0.9925333152392071, 0.9936257920351428, 0.9931435821376157, 0.9926477905890503, 0.9925333152392071, 0.9927779069991203, 0.9929437554492885, 0.9925017439584489, 0.99293384770743, 0.9934310695695089, 0.9934702178721884, 0.9934721013907659, 0.9924251009388676, 0.9924141340632909, 0.9926477905495983, 0.9934711740617125, 0.9932283919959691, 0.9925177139913511, 0.9934702178721884, 0.9943672356427694, 0.9927770719239265, 0.9929336452766124, 0.9925197420367843, 0.9925177139913511, 0.9931443273636676, 0.9925105155914694, 0.9931435821376157, 0.9934310695695089, 0.9925183863200961, 0.9926477905890503, 0.9932730568068178, 0.9924251010701199, 0.9925197420424023, 0.9932283919959691, 0.9931443296040251, 0.9928933176006907, 0.993273371715983, 0.9943672378832206, 0.9924430473679494, 0.99293384770743, 0.9925333184105342, 0.9926630435645116, 0.9923809642370167, 5.534127900729341, 0.9924219864121104, 0.9943682197206795, 0.9934702311259231, 0.9934310695695089, 0.9934760025373545, 0.9934702311259231, 0.9932802114960739, 0.9927770729322174, 0.9925611908926516, 0.9927770719239265, 0.9927327100858865, 0.9929336452766124, 0.9925001632546028, 0.9923722834456535, 0.9929336453222932, 0.9925179551267049, 0.9936341873975495, 0.9929437555014818, 0.9932802114960739, 0.9937315476278487, 0.992340204253054, 0.9943672356427694, 0.9929336468714807, 0.9938370469336766, 0.9924251183061013, 0.9925197839911024, 0.9924888069008881, 0.9934342191574459, 0.9936253008137887, 0.9926477893954572, 0.9925179551643614, 0.9929437555006061, 0.9925533562870937, 0.99293384770743, 0.9923806778419063, 0.9924141340632909, 0.9929338477385575, 0.9924723646193916, 0.9931435821376157, 0.9939625941543071, 0.9925611908926516, 0.9925333152392071, 0.9924220612506358, 0.9931062434543886, 0.9925183208373158, 0.9936341873975495, 0.9930060593676604, 0.9933595398184349, 0.9931435821376157, 0.992500165533227, 0.9925105155937887, 0.9925334716346541, 0.9930061381944508, 0.9924431316500499, 0.9932283919959691, 0.9934702178721884, 0.9924430459213518, 0.9932802114960739, 0.9925333184105342, 0.9925179551267049, 0.99293384770743, 0.9925197420367843, 0.9932730568068178, 0.9924141340632909, 0.9922655287420374, 0.9926389443188771, 0.9925611915170334, 0.9934702178721884, 1.003815974390525, 0.9943672356427694, 0.9931242168810309, 0.9923806781609613, 0.9929437554492885, 0.9925180203827441, 0.9934702178721884, 0.9932730568068178, 0.9931435821376157, 0.9925333152392071, 0.9924628213793587, 0.9929339147938504, 0.9928952725654127, 0.9928135530250399, 0.9936341873975495, 0.9932730568068178, 0.9933595398184349, 0.9926389443188771, 0.9929336452766124, 0.9929336452766124, 0.9942200873476073, 0.9936341873975495, 0.9927770719239265, 0.9924430459213518, 0.9926201559100486, 0.9924252056384386, 0.9943672356427694, 0.993145576241621, 0.99293384770743, 0.9924219864121104, 0.9930060593676604, 0.9926630435645116, 0.9925177142565453, 0.9925724802126665, 0.9934702178721884, 0.99293384770743, 0.9931242168453891, 0.9935280297156994, 0.9929269198131784, 0.9925177145702, 0.9934944226875512, 0.9926630435964957, 0.9927316133358599, 0.9942202059662885, 0.9924891308183373, 0.9932283919959691, 0.9924916029918769, 0.9929514811370853, 0.9925533562870937, 0.9925611908928279, 0.9925333805770736, 0.9924251010701199, 0.9934710042481166, 0.9934702196733644, 0.9926630435838483, 0.9937820383672223, 0.9934702178721884, 1.289770218789526, 0.9923806778485363, 0.9925333152392071, 0.9925262780766848, 0.9925105155914694, 0.9932283919959691, 0.9926389443188771, 0.9923722834023404, 0.9936341873975495, 0.9931443273636676, 0.9923819935279636, 0.9926630435645116, 0.9923806778416975, 0.9929338216476292, 0.9934705068936327, 0.9932283919959691, 0.9925611908926516, 0.9927770719239265, 0.9930060593676604, 0.9923806797664411, 0.99293384770743, 96.61018318142848, 0.9927316095609877, 0.9925333152392071, 0.9931443361508915, 0.9934702615527136, 1.277863355185025, 0.9927037613927259, 0.9932283919959691, 0.9926477905890503, 0.9927883244557256, 0.9931435821376157, 0.9924251435444661, 0.99293384770743, 0.9930060593676604, 0.9934310695700304, 0.9943672356427694, 0.9925001632546028, 0.9924453269718021, 0.9934702178870255, 0.9942342143723432, 0.9931435835230044, 0.9932283919959691, 0.9925179551267049, 0.9924141827939786, 0.9930060593676604, 0.9931062434543886, 0.9933611992054281, 0.9933236452335182, 0.9924220042898692, 0.9931062434543886, 0.9934702178721884, 0.9927770719239265, 0.9935106529921247, 0.9932730568068178, 1.003683321232154, 0.9925134341549161, 0.9934702178721884, 0.9923819935287798, 0.9925105155914694, 0.9924890218352123, 0.9925803855943743, 0.9925533563148154, 0.9934702311259231, 0.9925179551267049, 0.9927765988535552, 0.9925611908926516, 0.9931443361508915, 1.1709533601086, 0.9929348460615092, 0.9925333555363406, 1.680200862337119, 0.9925611908926516, 0.9931454521391414, 0.9931443273636676, 0.9925179551267049, 0.9931243135300136, 0.9927780679477454, 0.9939853880387395, 0.9927316095609877, 0.9925179551267049, 0.9931443273636676, 0.9924724104777751, 0.9924890218352123, 0.993980843665682, 0.9931062434533848, 0.9927765981836103, 0.9934702311259231, 0.993145576241621, 0.9926383253707707, 0.9927771104252784, 0.9926630435645116, 0.9924430459213518, 0.9925001632802875, 0.9936341873975495, 0.9936341873975495, 0.9924251009388676, 0.9925333152392071, 0.9932802114960739, 0.9934702178721884, 0.9924251009388676, 0.9943672356427694, 0.99293384770743, 0.9925179551267049, 0.9939853880387395, 1.136394402407403, 0.9930060593676604, 0.9934312163725574, 0.9930061463149751, 0.9924219863349872, 0.9932730572595352, 0.9922057548850312, 0.9932730568068178, 0.9932283919959691, 0.9925611908926516, 0.9936341752875782, 0.9937804107177057, 0.9931062434533848, 0.9936341873975495, 0.9932730568068178, 0.9931243135300136, 0.9925333152393693, 0.9929437554514192, 0.9934702178721884, 0.9931438904224409, 0.9927316095827786, 0.9934702178721884, 0.9925611908926516, 0.9924430459213518, 0.993542404827936, 0.9936341873975495, 0.9925179568473833, 0.9925177139957649, 1.06344206888931, 0.9924888068827, 0.9923722834023404, 0.992501743970806, 0.9924519674450802, 0.9926477905890503, 0.9931435821376157, 0.9929336452766124, 0.9927770719239265, 0.9934702186983491, 0.993273062112371, 0.9943672356427694, 0.9925611908942736, 0.9931242168453891, 0.9925179551267049, 0.9925005988699777, 0.9937800556793398, 0.9934702178870255, 0.992934792391622, 1.053461578299202, 0.9925612479009173, 0.9931443273636676, 0.9922655145148805, 0.99293384770743, 0.9927801199243507, 0.99293384770743, 0.9932283919959691, 0.9924430459213518, 0.9934310695833926, 0.9926491523624491, 0.9923806778416975, 0.9934702178721884, 0.9929437554492885, 0.9934728721160728, 0.9927813196488919, 0.992340204253054, 0.99293384770743, 0.9932730568068178, 0.9937910314239958, 0.9931443273636676, 0.9925611908926516, 0.9932283919959691, 0.9931448487922603, 0.9925617670711626, 0.9932283919959691, 0.9932283919959691, 0.9925613138866118, 0.9931242169038439, 0.9936341873975495, 0.9932283919959691, 0.9932730575279466, 0.9925017439584489, 0.9925533562871484, 0.9932283919959691, 0.9931062434543886, 0.9923806778416975, 0.9931242168453891, 0.9932283919959691, 0.9931242801119957, 0.9929437554514192, 0.9927883363113529, 0.9931435821987634, 0.9925533562870937, 0.9923806778416975, 0.9923402060310751, 0.9943672356427694, 0.9925425563157765, 0.9934702178721884, 0.9943679423506154, 0.9932283919959691, 0.993625792056415, 0.9930060593676604, 0.9943672356427694, 0.9931242962042888, 0.9934711740617125, 0.9931443273636676, 0.992340204253054, 0.99293384770743, 0.9930502408072168, 0.9924430459213518, 0.9925179551267049, 0.9931443273636676, 0.992647773868408, 0.9925197420367843]
5 ],
6 "optimized null": [
7 [0.9786581077036081, 1.004389132963844, 1.006770455649631, 1.008176044125132, 1.004389132963844, 0.9936998629094039, 1.008939833241961, 1.00457399350696, 1.002902171601161, 1.00457399350696, 1.000886594499545, 0.9971291950185418, 1.003332913479808, 1.002902171601161, 1.008217182533353, 1.004985012019546, 1.001023625153543, 1.002549888060238, 1.002902171601161, 1.000886594499545, 1.026589570630849, 1.000886594499545, 0.9989820080377838, 0.9996808869637284, 1.010999707459013, 1.000643038386471, 1.003320545158985, 1.004347524595964, 0.9502493690730872, 1.000886594499545, 1.004300801689703, 1.000886594499545, 1.004309973781106, 1.015957247423661, 1.073496507018953, 1.000499692613774, 1.004389132963844, 1.000936567110479, 0.9516426144969571, 0.8941575754533315, 1.013358342992878, 1.000499692613774, 1.003332913479808, 1.000499692613774, 0.9946406375856797, 1.000886594499545, 1.004389132963844, 0.9799486706425377, 1.007099739135763, 1.004389132963844, 1.010881773160207, 1.008176044125132, 1.000499692613774, 1.01454991150116, 1.002902171601161, 0.9575691112431229, 1.000274657828359, 1.008939833241961, 1.002902171601161, 1.008150533014812, 1.000669385920921, 1.000750439983579, 1.004300801689703, 1.003332913479808, 1.000886594499545, 1.005804727675085, 0.9980309320928363, 1.002132125976469, 1.026000742519211, 1.00336384836064, 0.9996808869637284, 1.003982221184785, 1.000886594499545, 0.9971291950185418, 1.00457399350696, 1.001023625153543, 0.9977684393693571, 1.003982221184785, 1.000499692613774, 1.008230729828895, 1.000274657828359, 1.003332913479808, 1.012021905351417, 1.008939833241961, 0.9989820080377838, 1.017136949234377, 1.013248436212499, 0.9996808869637284, 0.9931976278391842, 1.010226725866951, 1.002813088178671, 1.01198330139017, 1.009009556580994, 1.004300801689703, 1.008824259778342, 0.9991173403094149, 1.016690709017259, 1.309911328267608, 1.015071729964881, 1.008240763787273, 1.004972119591782, 1.003332913479808, 1.012840106025615, 1.004972119591782, 1.002283674358769, 1.008654524442024, 1.003320545158985, 1.00457399350696, 1.017171036517017, 1.001023625153543, 1.008705514664841, 1.027104711000087, 1.015329634873973, 1.004309973781106, 0.9981245706053452, 1.004581359124374, 1.002283674358769, 0.9050289703580853, 0.9991060640703496, 0.9971291950185418, 1.002802009327206, 1.014075698766017, 1.040067230609869, 1.015146856716957, 1.010498201324125, 0.9987344683896108, 0.9722950510321072, 1.003545330738238, 0.9781422715716531, 1.014973193383867, 0.9997783997666124, 1.004300801689703, 1.019478430696092, 1.002132125976469, 1.015966778948381, 0.9970667606741465, 1.000274657828359, 0.954814432242718, 1.003320545158985, 1.002902171601161, 1.031743333394625, 1.004389132963844, 1.008918250866916, 0.9981245706053452, 1.001119098747858, 0.995905163608436, 1.000274657828359, 1.013193916100421, 1.012037535864446, 1.007864331660681, 1.008615193212306, 1.008771282091114, 0.9996808869637284, 1.000886594499545, 1.004733860288616, 1.002283674358769, 1.008824259778342, 1.004309973781106, 1.004300801689703, 0.9977684393693571, 0.9989820080377838, 1.002132125976469, 1.015512516971352, 1.004985012019546, 1.017361072799404, 1.000886594499545, 0.928942112918144, 0.9971291950185418, 1.006423207056719, 1.033244497951072, 1.000669385920921, 1.007521338539962, 1.000886594499545, 0.9989820080377838, 1.000274657828359, 1.002902171601161, 0.9949367999620885, 1.008980021646535, 1.021622823749355, 1.00200051700678, 0.9981245706053452, 0.9989820080377838, 0.995905163608436, 1.004985012019546, 1.001023625153543, 1.001023625153543, 1.000643038386471, 0.9981245706053452, 1.00457399350696, 1.004733860288616, 1.008880173065771, 1.030196228936523, 0.9971291950185418, 1.005409745294412, 1.004300801689703, 1.015071729964881, 1.001119098747858, 0.9991173403094149, 1.004758932871948, 1.035690390558963, 1.000886594499545, 1.004300801689703, 1.002951962149957, 0.9909366998187937, 1.035274752879993, 1.007160965505245, 1.045412575449636, 1.013420517572302, 1.012939566918698, 1.00459514180449, 1.012815186984663, 0.9996808869637284, 0.9883564705167489, 1.031202058774797, 0.9997783997666124, 1.023419762065967, 1.006834685101128, 1.017136949234377, 1.004743134521959, 1.004022591511921, 1.012207316415882, 0.9477772780308691, 1.000886594499545, 0.7917857155831882, 1.031975973199509, 1.002902171601161, 1.022374679114396, 1.008230729828895, 0.9996808869637284, 1.004985012019546, 1.011842230290353, 0.9981245706053452, 1.000499692613774, 0.9990257426507344, 0.9991173403094149, 1.008176044125132, 1.017549986491495, 1.008562397615099, 0.9996808869637284, 1.003320545158985, 1.00457399350696, 1.001119098747858, 1.03210918140755, 1.004300801689703, 10.23915919712665, 1.001148500102876, 1.002902171601161, 1.004576527695204, 1.002621319140812, 0.7796309900752725, 0.9574297856363609, 0.9996808869637284, 1.008939833241961, 1.001039581802006, 1.000274657828359, 1.015408760987548, 1.004300801689703, 1.001119098747858, 1.028507691067469, 0.9971291950185418, 1.008705514664841, 1.006248704903786, 1.005013546197595, 1.007348992812517, 1.018036696355192, 0.9996808869637284, 1.004309973781106, 1.013903154256919, 1.001119098747858, 1.004389132963844, 1.019168886070628, 1.051847117228909, 1.011705287219846, 1.004389132963844, 1.000886594499545, 1.00457399350696, 1.015335227899423, 0.9989820080377838, 0.9659929164161947, 1.015269817491274, 1.000886594499545, 0.9829183273293222, 1.008230729828895, 1.000022921156985, 0.9537960713754556, 1.000062485688459, 1.004972119591782, 1.004309973781106, 1.000032854283641, 1.003320545158985, 1.004576527695204, 0.7440218315004116, 1.010955197829618, 0.9822330674481843, 0.9884473538655494, 1.003320545158985, 0.9830606925228258, 1.000499692613774, 1.004309973781106, 1.005923963434031, 1.012500598705202, 0.9502493690730872, 1.001148500102876, 1.004309973781106, 1.000499692613774, 1.012905973641429, 1.000022921156985, 0.9409571842959192, 0.9523659022224585, 1.009503344116515, 1.004972119591782, 1.005409745294412, 0.9519512852875427, 1.033691020711443, 0.9991173403094149, 1.004733860288616, 1.020054800028789, 0.9981245706053452, 0.9981245706053452, 0.9980309320928363, 1.002902171601161, 1.002283674358769, 1.000886594499545, 0.9980309320928363, 0.9971291950185418, 1.004300801689703, 1.004309973781106, 0.9502493690730872, 0.9379677591445464, 1.001119098747858, 1.006303469281888, 1.004120688428753, 1.010881773160207, 1.006888257664427, 1.035906806923022, 0.9989820080377838, 0.9996808869637284, 1.003320545158985, 1.032969981030868, 0.9484888338224357, 0.9523659022224585, 0.9981245706053452, 0.9989820080377838, 1.005923963434031, 0.9777315463046712, 0.9633364304623505, 1.000886594499545, 0.9797498970914627, 0.9928415026520769, 1.000886594499545, 1.003320545158985, 1.004733860288616, 0.9999902272123509, 0.9981245706053452, 1.00767355078304, 1.004724032756291, 0.7119184255788061, 1.007069215635673, 1.011842230290353, 1.000933910152492, 0.9966094188969109, 1.008939833241961, 1.000274657828359, 1.001023625153543, 1.00457399350696, 1.001654321875974, 1.00304115008959, 0.9971291950185418, 1.003872201836682, 1.002951962149957, 1.004309973781106, 1.012801119391305, 0.9514660235605208, 1.005013546197595, 1.008063440241554, 0.5223507205441806, 1.052896913831887, 1.000499692613774, 0.9604998891232039, 1.004300801689703, 1.012061336829414, 1.004300801689703, 0.9996808869637284, 1.004733860288616, 1.008122927246832, 1.028373758825513, 1.008176044125132, 1.000886594499545, 1.000669385920921, 1.008204134082297, 1.006907099973082, 0.9991060640703496, 1.004300801689703, 0.9989820080377838, 0.9869352309494954, 1.000499692613774, 1.003320545158985, 0.9996808869637284, 1.004347524595964, 1.004330476108833, 0.9996808869637284, 0.9996808869637284, 1.053470632096482, 1.025571651026495, 0.9981245706053452, 0.9996808869637284, 1.002088149137131, 1.000750439983579, 1.012603515511442, 0.9996808869637284, 1.004389132963844, 1.008176044125132, 1.002951962149957, 0.9996808869637284, 1.010654525076057, 0.9633364304623505, 1.005833100693462, 1.01454991150116, 0.9997783997666124, 1.008176044125132, 1.020241898792859, 0.9971291950185418, 0.9541755161439343, 1.000886594499545, 1.001044802413122, 0.9996808869637284, 0.9689681863256027, 1.001119098747858, 0.9971291950185418, 1.006975895337292, 1.00336384836064, 1.000499692613774, 0.9991060640703496, 1.004300801689703, 1.026693639641921, 1.004733860288616, 1.004309973781106, 1.000499692613774, 1.013451915855326, 0.9977684393693571]
8 ]
9 },
10 "Site Log Likelihood":{
11 "constrained": [
12 [-10.47333160878323, -4.630649885727608, -9.623110022009271, -5.620920860305826, -4.630649885727608, -7.460901005463113, -4.956313915321943, -4.024416138290653, -4.783868085908451, -4.024416138290653, -3.128277170347453, -4.203502961720155, -4.627970275012947, -4.783868085908451, -7.0543298310678, -4.535245830058568, -4.185870533331506, -6.514341474331273, -4.783868085908451, -3.128277170347453, -9.006671500768812, -3.128277170347453, -3.688801749626695, -4.884085107583111, -10.17826401666552, -5.704216580031083, -4.120369996833806, -6.583771282020505, -6.752213812659895, -3.128277170347453, -3.534831223600414, -3.128277170347453, -4.344968024850921, -9.834695275956278, -14.6032791974858, -3.360982294247467, -4.630649885727608, -5.223582041034069, -10.29738902873949, -22.08124721419183, -11.91403596052559, -3.360982294247467, -4.627970275012947, -3.360982294247467, -10.1997131787375, -3.128277170347453, -4.630649885727608, -9.700867241766518, -11.55607810717029, -4.630649885727608, -6.008497382326125, -5.620920860305826, -3.360982294247467, -6.933408837726519, -4.783868085908451, -12.24420831778347, -3.960124478363684, -4.956313915321943, -4.783868085908451, -8.265843116482836, -4.748688514165026, -6.345603989379942, -3.534831223600414, -4.627970275012947, -3.128277170347453, -6.811596872695466, -5.176097457913978, -5.058483105542894, -9.509625683845309, -6.74239908564584, -4.884085107583111, -4.278579583394082, -3.128277170347453, -4.203502961720155, -4.024416138290653, -4.185870533331506, -5.739154040646026, -4.278579583394082, -3.360982294247467, -5.301586932682001, -3.960124478363684, -4.627970275012947, -8.65508707303627, -4.956313915321943, -3.688801749626695, -8.915177986368144, -7.931263457525198, -4.884085107583111, -7.633756904877949, -4.86028352033153, -6.911649811425896, -6.612021064833022, -7.705571608237738, -3.534831223600414, -8.832987517820406, -4.626912226836937, -11.97579998319196, -13.94205527203614, -8.196749939016584, -13.21554751819297, -6.322528548851571, -4.627970275012947, -11.73999226100727, -6.322528548851571, -4.249404837156452, -8.297323172685878, -4.120369996833806, -4.024416138290653, -9.082339947676607, -4.185870533331506, -5.52080696663701, -9.009344842510126, -7.159178863895419, -4.344968024850921, -4.12143841159351, -9.526426806250981, -4.249404837156452, -13.97229783742423, -6.785333207690147, -4.203502961720155, -18.73472377358965, -12.28710958783666, -14.79967283590834, -8.630808938913409, -7.249736021585222, -10.95494741909239, -11.60870429951649, -10.749264953031, -10.21074003254992, -7.721945846121523, -6.12090190262882, -3.534831223600414, -10.26945420263659, -5.058483105542894, -7.570293013615712, -4.951294996286566, -3.960124478363684, -9.43867561384433, -4.120369996833806, -4.783868085908451, -13.54306726202841, -4.630649885727608, -7.962370107451607, -4.12143841159351, -5.189336673669555, -5.068286949052877, -3.960124478363684, -7.706995429689744, -10.08302009377988, -8.467002420832342, -8.871529720572676, -7.734018634822497, -4.884085107583111, -3.128277170347453, -4.511756907586951, -4.249404837156452, -8.832987517820406, -4.344968024850921, -3.534831223600414, -5.739154040646026, -3.688801749626695, -5.058483105542894, -8.980084653783678, -4.535245830058568, -8.453455558876012, -3.128277170347453, -9.655496728668197, -4.203502961720155, -6.325234300404839, -11.69941647282104, -4.748688514165026, -8.27183182182935, -3.128277170347453, -3.688801749626695, -3.960124478363684, -4.783868085908451, -11.88542683114779, -17.27724667801933, -13.19654381074675, -5.70915913776924, -4.12143841159351, -3.688801749626695, -5.068286949052877, -4.535245830058568, -4.185870533331506, -4.185870533331506, -5.704216580031083, -4.12143841159351, -4.024416138290653, -4.511756907586951, -5.136385410041022, -11.00422025536303, -4.203502961720155, -7.044375726594078, -3.534831223600414, -8.196749939016584, -5.189336673669555, -4.626912226836937, -7.893976390471492, -21.63289260672, -3.128277170347453, -3.534831223600414, -4.860629745154555, -18.94740875681828, -14.16563976331805, -6.823555557339379, -15.1904604104798, -7.600182334906296, -13.39005235871584, -7.92238499977061, -13.13738064854841, -4.884085107583111, -14.12070901689933, -14.8224158005572, -6.12090190262882, -10.55718329302045, -8.006076344751214, -8.915177986368144, -6.350945375164426, -5.672065688595174, -8.24434143261743, -7.578267074385799, -3.128277170347453, -11.29580851826993, -12.6510316848218, -4.783868085908451, -9.992254918312694, -5.301586932682001, -4.884085107583111, -4.535245830058568, -5.34944096612418, -4.12143841159351, -3.360982294247467, -6.46633317470056, -4.626912226836937, -5.620920860305826, -8.326182230249815, -8.524523985930827, -4.884085107583111, -4.120369996833806, -4.024416138290653, -5.189336673669555, -14.54823798675218, -3.534831223600414, -49.29950639527387, -6.412671107369729, -4.783868085908451, -6.555359201491386, -9.206855624450975, -20.35504493429262, -9.147022928068283, -4.884085107583111, -4.956313915321943, -6.024894434531364, -3.960124478363684, -8.067913992260367, -3.534831223600414, -5.189336673669555, -11.50036914694174, -4.203502961720155, -5.52080696663701, -17.00550285965466, -8.470418365825024, -10.40969765740573, -8.489584836475206, -4.884085107583111, -4.344968024850921, -8.986490379825025, -5.189336673669555, -4.630649885727608, -9.354949630518176, -23.88929568966177, -8.030083726579948, -4.630649885727608, -3.128277170347453, -4.024416138290653, -24.07725149854659, -3.688801749626695, -7.479881635707723, -8.194685710351839, -3.128277170347453, -14.74926725750939, -5.301586932682001, -8.917866981324533, -7.902207168526574, -10.02763874682584, -6.322528548851571, -4.344968024850921, -7.459324104001303, -4.120369996833806, -6.555359201491386, -9.229610975468395, -13.5300831456048, -10.2633849016878, -14.18610532785329, -4.120369996833806, -13.36616017602115, -3.360982294247467, -4.344968024850921, -6.88087996497761, -7.523527448478747, -6.752213812659895, -6.412671107369729, -4.344968024850921, -3.360982294247467, -7.884521313278676, -8.917866981324533, -10.87469586120196, -8.531549713840546, -7.999671433340498, -6.322528548851571, -7.044375726594078, -8.174287945128402, -11.30672447056382, -4.626912226836937, -4.511756907586951, -9.534546409283889, -4.12143841159351, -4.12143841159351, -5.176097457913978, -4.783868085908451, -4.249404837156452, -3.128277170347453, -5.176097457913978, -4.203502961720155, -3.534831223600414, -4.344968024850921, -6.752213812659895, -30.32286358402002, -5.189336673669555, -6.648072763272347, -7.20898088354379, -6.008497382326125, -17.9914914692569, -14.84859681141545, -3.688801749626695, -4.884085107583111, -4.120369996833806, -12.23999903551347, -7.080033274045507, -8.531549713840546, -4.12143841159351, -3.688801749626695, -6.88087996497761, -9.631408733744529, -10.33487499492943, -3.128277170347453, -14.90190065534899, -9.769098108990313, -3.128277170347453, -4.120369996833806, -4.511756907586951, -9.228253836769397, -4.12143841159351, -6.886967519390136, -7.632803998935954, -20.7372443957804, -5.785814031063177, -5.34944096612418, -10.04354938772886, -5.615529712772109, -4.956313915321943, -3.960124478363684, -4.185870533331506, -4.024416138290653, -6.743165662297804, -6.883245056379033, -4.203502961720155, -9.006892591940629, -4.860629745154555, -4.344968024850921, -7.737001558250109, -9.623768594301104, -8.470418365825024, -8.0706701010761, -24.41890897555162, -27.37771152034593, -3.360982294247467, -14.49090624180688, -3.534831223600414, -8.999013960104351, -3.534831223600414, -4.884085107583111, -4.511756907586951, -9.973425084460246, -9.690047186234469, -5.620920860305826, -3.128277170347453, -4.748688514165026, -13.23860423456229, -12.16091814223385, -6.785333207690147, -3.534831223600414, -3.688801749626695, -10.5558105390548, -3.360982294247467, -4.120369996833806, -4.884085107583111, -6.583771282020505, -8.671320317584076, -4.884085107583111, -4.884085107583111, -18.27111253832621, -11.37449862051627, -4.12143841159351, -4.884085107583111, -6.232994258710883, -6.345603989379942, -9.46036764991895, -4.884085107583111, -4.630649885727608, -5.620920860305826, -4.860629745154555, -4.884085107583111, -9.002629754547929, -10.33487499492943, -9.858110207543646, -6.933408837726519, -6.12090190262882, -5.620920860305826, -9.575876626740111, -4.203502961720155, -13.52047091633557, -3.128277170347453, -7.42617741914234, -4.884085107583111, -10.36729177793361, -5.189336673669555, -4.203502961720155, -7.079050265733093, -6.74239908564584, -3.360982294247467, -6.785333207690147, -3.534831223600414, -13.44269088724829, -4.511756907586951, -4.344968024850921, -3.360982294247467, -9.524947235392851, -5.739154040646026]
13 ],
14 "optimized null": [
15 [-10.45944796576106, -4.641947042798756, -9.63747222619657, -5.636712159140873, -4.641947042798756, -7.46145726225411, -4.972593394940105, -4.036228842592277, -4.794260754332366, -4.036228842592277, -3.135714566471997, -4.206276716273826, -4.637888247453792, -4.794260754332366, -7.070099088703008, -4.547606739988143, -4.193985074588507, -6.524712896791322, -4.794260754332366, -3.135714566471997, -9.040045779937978, -3.135714566471997, -3.69453291021767, -4.890560582992772, -10.19669834314011, -5.71065609274873, -4.131151656185468, -6.594988139126732, -6.707215750183875, -3.135714566471997, -3.546214039053464, -3.135714566471997, -4.356778913072903, -9.856174520141263, -14.68144918694548, -3.368361142777847, -4.641947042798756, -5.232032900679095, -10.25528992414742, -21.97625023987851, -11.93469414949823, -3.368361142777847, -4.637888247453792, -3.368361142777847, -10.20188979704693, -3.135714566471997, -4.641947042798756, -9.687354419185587, -11.56970153079389, -4.641947042798756, -6.026927247731146, -5.636712159140873, -3.368361142777847, -6.954733945958806, -4.794260754332366, -12.20724554606778, -3.967279129572499, -4.972593394940105, -4.794260754332366, -8.281208911853943, -4.756438933726225, -6.353880657209589, -3.546214039053464, -4.637888247453792, -3.135714566471997, -6.823934116374008, -5.181730183161418, -5.068227746725574, -9.542673524448192, -6.752307520868453, -4.890560582992772, -4.290064315253384, -3.135714566471997, -4.206276716273826, -4.036228842592277, -4.193985074588507, -5.744428361771138, -4.290064315253384, -3.368361142777847, -5.3173016462002, -3.967279129572499, -4.637888247453792, -8.674547030604288, -4.972593394940105, -3.69453291021767, -8.939773488568026, -7.951933276104036, -4.890560582992772, -7.633810569590586, -4.877590362197832, -6.921208304293912, -6.629581820905788, -7.722126471975145, -3.546214039053464, -8.84926776815173, -4.633393181653718, -12.00000114196842, -12.50108072571016, -8.219316091550875, -13.22940221083235, -6.334039529354989, -4.637888247453792, -11.7592960035361, -6.334039529354989, -4.258428375834533, -8.313189600113493, -4.131151656185468, -4.036228842592277, -9.106659053406172, -4.193985074588507, -5.53700290873432, -9.043745682757567, -7.18148362669201, -4.356778913072903, -4.125947382167896, -9.538078960418941, -4.258428375834533, -13.87879769468586, -6.792128154616185, -4.206276716273826, -18.74461330265066, -12.3072691662857, -14.84656190860705, -8.653350560488903, -7.267719043625265, -10.9602685164184, -11.58700343372236, -10.76018338521335, -10.19615006071596, -7.743889305334691, -6.128154786221035, -3.546214039053464, -10.29639385418295, -5.068227746725574, -7.593224900099627, -4.955913557603914, -3.967279129572499, -9.398493049343369, -4.131151656185468, -4.794260754332366, -13.5819239874153, -4.641947042798756, -7.978758632896514, -4.125947382167896, -5.197473659566543, -5.070846311992534, -3.967279129572499, -7.727631163815444, -10.10250342615266, -8.48233053223732, -8.887126448275863, -7.750337238838044, -4.890560582992772, -3.135714566471997, -4.524065250924378, -4.258428375834533, -8.84926776815173, -4.356778913072903, -3.546214039053464, -5.744428361771138, -3.69453291021767, -5.068227746725574, -9.00324261907727, -4.547606739988143, -8.478134264499081, -3.135714566471997, -9.577979163353465, -4.206276716273826, -6.338536496810734, -11.73976881938728, -4.756438933726225, -8.286835126164734, -3.135714566471997, -3.69453291021767, -3.967279129572499, -4.794260754332366, -11.88791649637069, -17.29327778725786, -13.22506626360656, -5.718370050277024, -4.125947382167896, -3.69453291021767, -5.070846311992534, -4.547606739988143, -4.193985074588507, -4.193985074588507, -5.71065609274873, -4.125947382167896, -4.036228842592277, -4.524065250924378, -5.152633596108179, -11.0415731818085, -4.206276716273826, -7.05664891499913, -3.546214039053464, -8.219316091550875, -5.197473659566543, -4.633393181653718, -7.906234453883187, -21.67541609624579, -3.135714566471997, -3.546214039053464, -4.87047688908739, -18.94479713935671, -14.20740482952599, -6.838201423027514, -15.24139885783089, -7.620877599281854, -13.41020385475269, -7.932766177826088, -13.1576536336891, -4.890560582992772, -14.11653389762868, -14.86021444670236, -6.128154786221035, -10.58779963545874, -8.020382413435383, -8.939773488568026, -6.36222769934059, -5.682631403722193, -8.263838844881931, -7.530868704937142, -3.135714566471997, -10.80787995582353, -12.69015556730517, -4.794260754332366, -10.02188474664245, -5.3173016462002, -4.890560582992772, -4.547606739988143, -5.368870582324859, -4.125947382167896, -3.368361142777847, -6.473005614152475, -4.633393181653718, -5.636712159140873, -8.350671256174984, -8.539600837631284, -4.890560582992772, -4.131151656185468, -4.036228842592277, -5.197473659566543, -14.58749093969892, -3.546214039053464, -47.05504175023903, -6.421113882336668, -4.794260754332366, -6.566804560599142, -9.216024664377089, -19.8609209439914, -9.110843022864849, -4.890560582992772, -4.972593394940105, -6.033171281721154, -3.967279129572499, -8.090808935255513, -3.546214039053464, -5.197473659566543, -11.53506865577706, -4.206276716273826, -5.53700290873432, -17.01931547646493, -8.481970580451621, -10.42280224988667, -8.51434083115109, -4.890560582992772, -4.356778913072903, -9.007912507668337, -5.197473659566543, -4.641947042798756, -9.380598043745161, -23.94654220890741, -8.049327891477901, -4.641947042798756, -3.135714566471997, -4.036228842592277, -24.09898082466264, -3.69453291021767, -7.441606303593074, -8.217354848399648, -3.135714566471997, -14.7396851818025, -5.3173016462002, -8.92542922982401, -7.862349053139855, -10.03517573891678, -6.334039529354989, -4.356778913072903, -7.466606573971403, -4.131151656185468, -6.566804560599142, -8.776107819594058, -13.54806900027333, -10.25295290185205, -13.65557208427181, -4.131151656185468, -13.35595390560164, -3.368361142777847, -4.356778913072903, -6.893685883644584, -7.543198696234895, -6.707215750183875, -6.421113882336668, -4.356778913072903, -3.368361142777847, -7.904900779349211, -8.92542922982401, -10.81987556503055, -8.489661375139889, -8.016379521653109, -6.334039529354989, -7.05664891499913, -8.132435434193235, -11.34710948349902, -4.633393181653718, -4.524065250924378, -9.561930862561987, -4.125947382167896, -4.125947382167896, -5.181730183161418, -4.794260754332366, -4.258428375834533, -3.135714566471997, -5.181730183161418, -4.206276716273826, -3.546214039053464, -4.356778913072903, -6.707215750183875, -30.13096343627734, -5.197473659566543, -6.660946901818968, -7.22011153050098, -6.026927247731146, -18.0051057818628, -14.89169877550506, -3.69453291021767, -4.890560582992772, -4.131151656185468, -12.27882333821542, -7.033387023411675, -8.489661375139889, -4.125947382167896, -3.69453291021767, -6.893685883644584, -9.61638329457857, -10.30460368097027, -3.135714566471997, -14.88832242909, -9.769208800526911, -3.135714566471997, -4.131151656185468, -4.524065250924378, -9.234722599572478, -4.125947382167896, -6.902121952278728, -7.645027327192124, -20.33594156878613, -5.800397921116144, -5.368870582324859, -10.0520093713315, -5.619710033736252, -4.972593394940105, -3.967279129572499, -4.193985074588507, -4.036228842592277, -6.751369810876809, -6.893031257243256, -4.206276716273826, -9.018223931128244, -4.87047688908739, -4.356778913072903, -7.757249098926983, -9.58025666188818, -8.481970580451621, -8.085791489864905, -23.71741145421051, -27.43672340870335, -3.368361142777847, -14.45836938134651, -3.546214039053464, -9.018249208190653, -3.546214039053464, -4.890560582992772, -4.524065250924378, -9.988105799100634, -9.725403864066022, -5.636712159140873, -3.135714566471997, -4.756438933726225, -13.25332342041071, -12.17504635856121, -6.792128154616185, -3.546214039053464, -3.69453291021767, -10.54888799959733, -3.368361142777847, -4.131151656185468, -4.890560582992772, -6.594988139126732, -8.683107478695856, -4.890560582992772, -4.890560582992772, -18.33066910680273, -11.40664831617236, -4.125947382167896, -4.890560582992772, -6.241829901027807, -6.353880657209589, -9.480366910616279, -4.890560582992772, -4.641947042798756, -5.636712159140873, -4.87047688908739, -4.890560582992772, -9.020127386703525, -10.30460368097027, -9.871164155011371, -6.954733945958806, -6.128154786221035, -5.636712159140873, -9.603605662461549, -4.206276716273826, -13.48104866050613, -3.135714566471997, -7.432869653617804, -4.890560582992772, -10.34216288880496, -5.197473659566543, -4.206276716273826, -7.092901392439244, -6.752307520868453, -3.368361142777847, -6.792128154616185, -3.546214039053464, -13.47600848884387, -4.524065250924378, -4.356778913072903, -3.368361142777847, -9.545688864478331, -5.744428361771138]
16 ],
17 "unconstrained": [
18 [-10.48102088924961, -4.637567513986654, -9.630724587153804, -5.628569357791164, -4.637567513986654, -7.467777328958682, -4.963693285433831, -4.031665278004504, -4.791362785900957, -4.031665278004504, -3.134828364765207, -4.209151649919525, -4.634560875819868, -4.791362785900957, -7.061915483399305, -4.542634112001697, -4.192961972981944, -6.522166254179794, -4.791362785900957, -3.134828364765207, -9.013803567981647, -3.134828364765207, -3.695551420685624, -4.890879746956443, -10.18575869245987, -5.710013261022853, -4.127836611862739, -6.590650037714016, -6.758246585255741, -3.134828364765207, -3.541922459379428, -3.134828364765207, -4.352478200627586, -9.840343251177751, -14.61052810243899, -3.367861574968853, -4.637567513986654, -5.231096771873945, -10.30485564376044, -22.08812350032256, -11.9214242424677, -3.367861574968853, -4.634560875819868, -3.367861574968853, -10.20726357236303, -3.134828364765207, -4.637567513986654, -9.707609504770193, -11.56262687614712, -4.637567513986654, -6.016104255025239, -5.628569357791164, -3.367861574968853, -6.940288868756962, -4.791362785900957, -12.25060292775589, -3.967004509455696, -4.963693285433831, -4.791362785900957, -8.273091415046276, -4.755769771744132, -6.353130498665301, -3.541922459379428, -4.634560875819868, -3.134828364765207, -6.818146171216636, -5.1837011922314, -5.066097890503999, -9.517005053996941, -6.748949317589786, -4.890879746956443, -4.286090002123917, -3.134828364765207, -4.209151649919525, -4.031665278004504, -4.192961972981944, -5.746662416043704, -4.286090002123917, -3.367861574968853, -5.309104604104543, -3.967004509455696, -4.634560875819868, -8.66259681436911, -4.963693285433831, -3.695551420685624, -8.922781720553312, -7.938771832917215, -4.890879746956443, -7.640636183343513, -4.867415575480379, -6.918399165442987, -6.617669750779249, -7.713157259309583, -3.541922459379428, -8.840482214617728, -4.634276231117743, -11.98344819208313, -12.2311212791334, -8.204356811637986, -13.22119521674044, -6.329079729928477, -4.634560875819868, -11.74653763275594, -6.329079729928477, -4.256147305096924, -8.304572311384103, -4.127836611862739, -4.031665278004504, -9.089633772980475, -4.192961972981944, -5.52833506856955, -9.017001798877962, -7.166270303499852, -4.352478200627586, -4.127824572382131, -9.533508063777523, -4.256147305096924, -13.97858601903503, -6.793022490344839, -4.209151649919525, -18.74181521163387, -12.29329161028775, -14.80727655272597, -8.638317272040576, -7.257275565751332, -10.96153484949017, -11.61509940386162, -10.75664432434532, -10.21825020828864, -7.729027103648947, -6.128376411011383, -3.541922459379428, -10.27710270012172, -5.066097890503999, -7.577384249363377, -4.958851107307215, -3.967004509455696, -9.444731318513487, -4.127836611862739, -4.791362785900957, -13.55067405923983, -4.637567513986654, -7.969879914760838, -4.127824572382131, -5.196355186542901, -5.07494955518413, -3.967004509455696, -7.714523529326442, -10.09053776520009, -8.474496963252873, -8.878548154064042, -7.741604200970478, -4.890879746956443, -3.134828364765207, -4.519342560116407, -4.256147305096924, -8.840482214617728, -4.352478200627586, -3.541922459379428, -5.746662416043704, -3.695551420685624, -5.066097890503999, -8.987849191195332, -4.542634112001697, -8.460922173275884, -3.134828364765207, -9.651688016638488, -4.209151649919525, -6.332133830636489, -11.70706496998466, -4.755769771744132, -8.279341931858049, -3.134828364765207, -3.695551420685624, -3.967004509455696, -4.791362785900957, -11.89299255783761, -17.28433784623451, -13.20367389694006, -5.716371531639654, -4.127824572382131, -3.695551420685624, -5.07494955518413, -4.542634112001697, -4.192961972981944, -4.192961972981944, -5.710013261022853, -4.127824572382131, -4.031665278004504, -4.519342560116407, -5.143792619900237, -11.01182388418175, -4.209151649919525, -7.0512537498173, -3.541922459379428, -8.204356811637986, -5.196355186542901, -4.634276231117743, -7.901486808934133, -21.64034784788511, -3.134828364765207, -3.541922459379428, -4.867529275422094, -18.95390176110568, -14.17273797631759, -6.831065975486001, -15.19698724128799, -7.607546339154881, -13.39734728879909, -7.928181561454114, -13.1449198663457, -4.890879746956443, -14.1282457438175, -14.82948927757704, -6.128376411011383, -10.5646499080492, -8.013570978914329, -8.922781720553312, -6.357495778037952, -5.678616881199913, -8.251705436878757, -7.584504448052701, -3.134828364765207, -11.04134444073185, -12.65868018230024, -4.791362785900957, -9.999756708432415, -5.309104604104543, -4.890879746956443, -4.542634112001697, -5.357097922535662, -4.127824572382131, -3.367861574968853, -6.473980346398905, -4.634276231117743, -5.628569357791164, -8.333273492274083, -8.531074889427527, -4.890879746956443, -4.127836611862739, -4.031665278004504, -5.196355186542901, -14.55588648229799, -3.541922459379428, -44.72882224365445, -6.419966041255492, -4.791362785900957, -6.56223847336489, -9.213406774901106, -20.1098555048792, -9.154345914409111, -4.890879746956443, -4.963693285433831, -6.032132239910099, -3.967004509455696, -8.075517683646995, -3.541922459379428, -5.196355186542901, -11.50695974774814, -4.209151649919525, -5.52833506856955, -17.01308621376726, -8.476969560227843, -10.41548012934606, -8.496464866172266, -4.890879746956443, -4.352478200627586, -8.994105115682952, -5.196355186542901, -4.637567513986654, -9.361610566171077, -23.89599443098075, -8.037690581187078, -4.637567513986654, -3.134828364765207, -4.031665278004504, -24.08376199290473, -3.695551420685624, -7.476205081292069, -8.202200441191778, -3.134828364765207, -14.75691442920691, -5.309104604104543, -8.925406308929711, -7.909654445184934, -10.03511325518047, -6.329079729928477, -4.352478200627586, -7.466573720227452, -4.127836611862739, -6.56223847336489, -9.071792720759081, -13.53717337592551, -10.27087956108003, -13.66719198067001, -4.127836611862739, -13.37303832420339, -3.367861574968853, -4.352478200627586, -6.887779397891144, -7.530775584922733, -6.758246585255741, -6.419966041255492, -4.352478200627586, -3.367861574968853, -7.892077378093119, -8.925406308929711, -10.88073320567935, -8.538467342100603, -8.006921050241466, -6.329079729928477, -7.0512537498173, -8.18167685060973, -11.31397357149621, -4.634276231117743, -4.519342560116407, -9.542074511190551, -4.127824572382131, -4.127824572382131, -5.1837011922314, -4.791362785900957, -4.256147305096924, -3.134828364765207, -5.1837011922314, -4.209151649919525, -3.541922459379428, -4.352478200627586, -6.758246585255741, -30.19500313875811, -5.196355186542901, -6.654663216305514, -7.215999308857437, -6.016104255025239, -17.99824113986005, -14.85642159042145, -3.695551420685624, -4.890879746956443, -4.127836611862739, -12.24638520848965, -7.086272285547253, -8.538467342100603, -4.127824572382131, -3.695551420685624, -6.887779397891144, -9.638903433736871, -10.34195625250639, -3.134828364765207, -14.90878037602791, -9.776393042854126, -3.134828364765207, -4.127836611862739, -4.519342560116407, -9.234732372407882, -4.127824572382131, -6.894477693433151, -7.640314417661342, -20.67573351373631, -5.793353575247613, -5.357097922535662, -10.05107589700177, -5.623106375885332, -4.963693285433831, -3.967004509455696, -4.192961972981944, -4.031665278004504, -6.749716855883968, -6.889994722096477, -4.209151649919525, -9.014359206967928, -4.867529275422094, -4.352478200627586, -7.74452922127564, -9.630007963063292, -8.476969560227843, -8.077760385448588, -24.36682749248215, -27.38517807793934, -3.367861574968853, -14.49867079355658, -3.541922459379428, -9.00626002964683, -3.541922459379428, -4.890879746956443, -4.519342560116407, -9.980015685253191, -9.697425184487701, -5.628569357791164, -3.134828364765207, -4.755769771744132, -13.24515275729418, -12.16816300332765, -6.793022490344839, -3.541922459379428, -3.695551420685624, -10.56203886343752, -3.367861574968853, -4.127836611862739, -4.890879746956443, -6.590650037714016, -8.678786352116463, -4.890879746956443, -4.890879746956443, -18.2785790294394, -11.38139815072495, -4.127824572382131, -4.890879746956443, -6.239743929043799, -6.353130498665301, -9.467842158301458, -4.890879746956443, -4.637567513986654, -5.628569357791164, -4.867529275422094, -4.890879746956443, -9.009529221110844, -10.34195625250639, -9.865348000980633, -6.940288868756962, -6.128376411011383, -5.628569357791164, -9.583565907603058, -4.209151649919525, -13.52795630577556, -3.134828364765207, -7.431825396630847, -4.890879746956443, -10.37368638788462, -5.196355186542901, -4.209151649919525, -7.085949716092303, -6.748949317589786, -3.367861574968853, -6.793022490344839, -3.541922459379428, -13.44966490849312, -4.519342560116407, -4.352478200627586, -3.367861574968853, -9.532326622349226, -5.746662416043704]
19 ]
20 },
21 "analysis":{
22 "authors":"Sergei L Kosakovsky Pond",
23 "citation":"*Gene-wide identification of episodic selection*, Mol Biol Evol. 32(5):1365-71",
24 "contact":"spond@temple.edu",
25 "info":"BUSTED (branch-site unrestricted statistical test of episodic diversification) uses a random effects branch-site model fitted \njointly to all or a subset of tree branches in order to test for alignment-wide evidence of episodic diversifying selection. \nAssuming there is evidence of positive selection (i.e. there is an omega > 1), BUSTED will also perform a quick evidence-ratio \nstyle analysis to explore which individual sites may have been subject to selection. v2.0 adds support for synonymous rate variation, \nand relaxes the test statistic to 0.5 (chi^2_0 + chi^2_2). Version 2.1 adds a grid search for the initial starting point.\nVersion 2.2 changes the grid search to LHC, and adds an initial search phase to use adaptive Nedler-Mead. Version 3.0 implements the option\nfor branch-site variation in synonymous substitution rates. Version 3.1 adds HMM auto-correlation option for SRV, and binds SRV distributions for multiple branch sets\n",
26 "requirements":"in-frame codon alignment and a phylogenetic tree (optionally annotated with {})",
27 "version":"3.1"
28 },
29 "background":1,
30 "branch attributes":{
31 "0":{
32 "B_FR_83_HXB2":{
33 "MG94xREV with separate rates for branch sets":0.0124534911696585,
34 "Nucleotide GTR":0.01178680392701259,
35 "constrained":0.0133332678009897,
36 "original name":"B_FR_83_HXB2",
37 "unconstrained":0.01333097793183841
38 },
39 "B_US_83_RF":{
40 "MG94xREV with separate rates for branch sets":0.02861194347570897,
41 "Nucleotide GTR":0.02637179869727959,
42 "constrained":0.03221962988361129,
43 "original name":"B_US_83_RF",
44 "unconstrained":0.03256468480049571
45 },
46 "B_US_86_JRFL":{
47 "MG94xREV with separate rates for branch sets":0.01907096200225401,
48 "Nucleotide GTR":0.01766254318226218,
49 "constrained":0.0202680273768515,
50 "original name":"B_US_86_JRFL",
51 "unconstrained":0.02050998211592096
52 },
53 "B_US_90_WEAU160":{
54 "MG94xREV with separate rates for branch sets":0.0228124185259555,
55 "Nucleotide GTR":0.0208836028381146,
56 "constrained":0.02350080060535386,
57 "original name":"B_US_90_WEAU160",
58 "unconstrained":0.03169576721730974
59 },
60 "D_CD_83_ELI":{
61 "MG94xREV with separate rates for branch sets":0.02096580136021227,
62 "Nucleotide GTR":0.01905599613120992,
63 "constrained":0.02146725583386667,
64 "original name":"D_CD_83_ELI",
65 "unconstrained":0.02163106296740794
66 },
67 "D_CD_83_NDK":{
68 "MG94xREV with separate rates for branch sets":0.01029979658511127,
69 "Nucleotide GTR":0.009776698714183414,
70 "constrained":0.01035332290986223,
71 "original name":"D_CD_83_NDK",
72 "unconstrained":0.01033266120816073
73 },
74 "D_CD_84_84ZR085":{
75 "MG94xREV with separate rates for branch sets":0.0311654066957857,
76 "Nucleotide GTR":0.02822254903672137,
77 "constrained":0.03323755030380494,
78 "original name":"D_CD_84_84ZR085",
79 "unconstrained":0.03361093648063813
80 },
81 "D_UG_94_94UG114":{
82 "MG94xREV with separate rates for branch sets":0.05961647055090802,
83 "Nucleotide GTR":0.05323070232023583,
84 "constrained":0.06686538335493719,
85 "original name":"D_UG_94_94UG114",
86 "unconstrained":0.06754551106553502
87 },
88 "Node1":{
89 "MG94xREV with separate rates for branch sets":0.02629484580500255,
90 "Nucleotide GTR":0.02355240508560319,
91 "constrained":0.02886080451868769,
92 "unconstrained":0.02913820563215103
93 },
94 "Node10":{
95 "MG94xREV with separate rates for branch sets":0.001918758877996093,
96 "Nucleotide GTR":0.002230248981703367,
97 "constrained":0.001805007516719466,
98 "unconstrained":0.001821173275343402
99 },
100 "Node2":{
101 "MG94xREV with separate rates for branch sets":0.003971092177388864,
102 "Nucleotide GTR":0.003949360371801276,
103 "constrained":0.002472638754288051,
104 "unconstrained":0.002387715711685514
105 },
106 "Node3":{
107 "MG94xREV with separate rates for branch sets":0.01135514370835145,
108 "Nucleotide GTR":0.01048442975058683,
109 "constrained":0.01356000749275525,
110 "unconstrained":0.01374972129226249
111 },
112 "Node9":{
113 "MG94xREV with separate rates for branch sets":0.005568732807049801,
114 "Nucleotide GTR":0.004986123424162501,
115 "constrained":0.00559084970119209,
116 "unconstrained":0.005669013080318036
117 }
118 },
119 "attributes":{
120 "MG94xREV with separate rates for branch sets":{
121 "attribute type":"branch length",
122 "display order":1
123 },
124 "Nucleotide GTR":{
125 "attribute type":"branch length",
126 "display order":0
127 },
128 "constrained":{
129 "attribute type":"branch length",
130 "display order":1
131 },
132 "original name":{
133 "attribute type":"node label",
134 "display order":0
135 },
136 "unconstrained":{
137 "attribute type":"branch length",
138 "display order":0
139 }
140 }
141 },
142 "data partitions":{
143 "0":{
144 "coverage": [
145 [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439]
146 ],
147 "name":"busted.filter.default"
148 }
149 },
150 "fits":{
151 "Constrained model":{
152 "AIC-c":6401.571605880178,
153 "Log Likelihood":-3164.403373999521,
154 "Rate Distributions":{
155 "Background":{
156 "0":{
157 "omega":0.1702532607798455,
158 "proportion":0.8127334552706815
159 },
160 "1":{
161 "omega":0.2017838473060485,
162 "proportion":0.1774848965120759
163 },
164 "2":{
165 "omega":13.15236788524238,
166 "proportion":0.00978164821724258
167 }
168 },
169 "Test":{
170 "0":{
171 "omega":0,
172 "proportion":0.8358903801628909
173 },
174 "1":{
175 "omega":1,
176 "proportion":0.1436055877954064
177 },
178 "2":{
179 "omega":1,
180 "proportion":0.02050403204170275
181 }
182 }
183 },
184 "display order":3,
185 "estimated parameters":36
186 },
187 "MG94xREV with separate rates for branch sets":{
188 "AIC-c":6410.490466219016,
189 "Equilibrium frequencies": [
190 [0.07535940345366139],
191 [0.01443006409728228],
192 [0.02915821068672351],
193 [0.02954870567752823],
194 [0.03219408024958758],
195 [0.006164627375802654],
196 [0.01245659774045292],
197 [0.01262342001471309],
198 [0.0276793164843978],
199 [0.005300125700761717],
200 [0.01070973633984303],
201 [0.01085316415297191],
202 [0.0418125103783387],
203 [0.008006395714089126],
204 [0.01617817990958604],
205 [0.0163948426631036],
206 [0.0409913146415633],
207 [0.007849150478922548],
208 [0.01586044121725868],
209 [0.01607284872448998],
210 [0.01751178502783737],
211 [0.003353213651232053],
212 [0.006775694789785172],
213 [0.006866436807635995],
214 [0.01505600521072376],
215 [0.002882972930821469],
216 [0.005825499564956559],
217 [0.005903516300053625],
218 [0.02274367484777162],
219 [0.004355032959661065],
220 [0.008800028033786655],
221 [0.008917880494044083],
222 [0.06143704799998004],
223 [0.01176416611541591],
224 [0.0237713451467977],
225 [0.0240896977132239],
226 [0.0262463496652457],
227 [0.005025736545566795],
228 [0.01015528996016046],
229 [0.01029129247081581],
230 [0.02256567087217255],
231 [0.004320948178469224],
232 [0.008731154380523415],
233 [0.00884808446536876],
234 [0.034087812394816],
235 [0.006527245376826684],
236 [0.01318932435908579],
237 [0.01336595951511979],
238 [0.01178447449308153],
239 [0.02413128354890585],
240 [0.0262916585104385],
241 [0.005034412430862358],
242 [0.01017282094890981],
243 [0.01030905823951665],
244 [0.004328407393735399],
245 [0.008746226896405704],
246 [0.008863358836639712],
247 [0.03414665788893068],
248 [0.006538513303760755],
249 [0.0132120929750345],
250 [0.01338903305480236]
251 ],
252 "Log Likelihood":-3175.995949441886,
253 "Rate Distributions":{
254 "non-synonymous/synonymous rate ratio for *background*": [
255 [0.2379324068936849, 1]
256 ],
257 "non-synonymous/synonymous rate ratio for *test*": [
258 [0.1777604776475358, 1]
259 ]
260 },
261 "display order":1,
262 "estimated parameters":29
263 },
264 "Nucleotide GTR":{
265 "AIC-c":6683.094244259512,
266 "Equilibrium frequencies": [
267 [0.4044507575757576],
268 [0.1662878787878788],
269 [0.2095643939393939],
270 [0.2196969696969697]
271 ],
272 "Log Likelihood":-3320.503280793639,
273 "Rate Distributions":{
274 "Substitution rate from nucleotide A to nucleotide C":0.1815218119292989,
275 "Substitution rate from nucleotide A to nucleotide G":1,
276 "Substitution rate from nucleotide A to nucleotide T":0.08433479296165451,
277 "Substitution rate from nucleotide C to nucleotide G":0.1775869374255926,
278 "Substitution rate from nucleotide C to nucleotide T":1.184827038118431,
279 "Substitution rate from nucleotide G to nucleotide T":0.04288318031815568
280 },
281 "display order":0,
282 "estimated parameters":21
283 },
284 "Unconstrained model":{
285 "AIC-c":6400.149223170942,
286 "Log Likelihood":-3162.670820660715,
287 "Rate Distributions":{
288 "Background":{
289 "0":{
290 "omega":0.1679188282558003,
291 "proportion":0.8207520434237199
292 },
293 "1":{
294 "omega":0.2120937673953722,
295 "proportion":0.1693698006934513
296 },
297 "2":{
298 "omega":13.84252711122189,
299 "proportion":0.00987815588282877
300 }
301 },
302 "Test":{
303 "0":{
304 "omega":0.08367159828032572,
305 "proportion":0.9533274940567786
306 },
307 "1":{
308 "omega":0.2493792697064242,
309 "proportion":0.03716922067476962
310 },
311 "2":{
312 "omega":34.20463703717275,
313 "proportion":0.009503285268451747
314 }
315 }
316 },
317 "display order":2,
318 "estimated parameters":37
319 }
320 },
321 "input":{
322 "file name":"/tmp/tmpfzf3u9m4/job_working_directory/000/2/working/./input.nex",
323 "number of sequences":8,
324 "number of sites":440,
325 "partition count":1,
326 "trees":{
327 "0":"((((D_CD_83_ELI,D_CD_83_NDK)Node3,D_UG_94_94UG114)Node2,D_CD_84_84ZR085)Node1,B_US_83_RF,((B_FR_83_HXB2,B_US_86_JRFL)Node10,B_US_90_WEAU160)Node9)"
328 }
329 },
330 "test results":{
331 "LRT":3.465106677611402,
332 "p-value":0.08841616008911996
333 },
334 "tested":{
335 "0":{
336 "B_FR_83_HXB2":"background",
337 "B_US_83_RF":"background",
338 "B_US_86_JRFL":"background",
339 "B_US_90_WEAU160":"test",
340 "D_CD_83_ELI":"background",
341 "D_CD_83_NDK":"background",
342 "D_CD_84_84ZR085":"background",
343 "D_UG_94_94UG114":"background",
344 "Node1":"background",
345 "Node10":"background",
346 "Node2":"background",
347 "Node3":"background",
348 "Node9":"background"
349 }
350 },
351 "timers":{
352 "Constrained BUSTED model fitting":{
353 "order":3,
354 "timer":14
355 },
356 "Overall":{
357 "order":0,
358 "timer":60
359 },
360 "Preliminary model fitting":{
361 "order":1,
362 "timer":3
363 },
364 "Unconstrained BUSTED model fitting":{
365 "order":2,
366 "timer":40
367 }
368 }
369 }