Mercurial > repos > iuc > hyphy_fade
view test-data/summary/merged-site.json @ 33:a73fff151e38 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 821e0f3e4546bc55e093ab63bd9f9b57f2bf772d
| author | iuc |
|---|---|
| date | Thu, 18 Aug 2022 14:04:52 +0000 |
| parents | fccaa7ba05fd |
| children |
line wrap: on
line source
{ "12091": { "G": "ORF1a", "S": 3943, "index": 0, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCT": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12094": { "G": "ORF1a", "S": 3944, "index": 1, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATA": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12097": { "G": "ORF1a", "S": 3945, "index": 2, "bCFEL": { "p": 0, "a": 3.206171473304911, "b": { "background": 0, "B-1-617": 0.03175555207671071, "Reference": 5.433962997865532e-05 }, "pi": { "overall": 0.9766417072604165 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCC": 31, "GCT": 1 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 3.195197959507056, "b": 0, "p": 0.9580101497567953 }, "bMEME": { "p": 0.6666666666666666, "a": 3.180864197338322, "b+": 4.771296296007484, "w+": 0, "b-": 2.543979863949704, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 3.152554051843212, "b+": 4.728831077764818, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.03083220306091588, 0.246012012715961, 0.3671614662852546, -0.1712639841078613, 0.2624930750589453 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12100": { "G": "ORF1a", "S": 3946, "index": 3, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCA": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12103": { "G": "ORF1a", "S": 3947, "index": 4, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.691597641547223, "B-1-617": 0.6095939176926283, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAG": 31, "GAT": 1 } }, "aa": { "Reference": { "E": 31, "D": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0.0002152055713864022, "b+": 0.5537159057721711, "w+": 0, "b-": 5.380139284660055e-05, "w-": 1, "br": 0 }, "lMEME": { "p": 0.286224560648385, "a": 0, "b+": 11.93617095556557, "w+": 0.99, "b-": 0, "w-": 0.01, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.5104924519363182, -0.1367278481442925, 0.5919809397222774, -0.1178049485056483, 0.6168893659032167 ] }, "fade": { "A": { "rate": 5.317669856443896, "BF": 1.056046759725475 }, "C": { "rate": 5.488849388954032, "BF": 1.055266935973467 }, "D": { "rate": 12.34175495367182, "BF": 1.661182960653188 }, "E": { "rate": 0.5404438729873835, "BF": 0.6920271348976824 }, "F": { "rate": 5.516765759713073, "BF": 1.054913821691416 }, "G": { "rate": 5.631182577995646, "BF": 1.056784871287576 }, "H": { "rate": 5.545246467362125, "BF": 1.054178233509532 }, "I": { "rate": 5.342385893569428, "BF": 1.049470768898058 }, "K": { "rate": 5.46116393051838, "BF": 1.053881463838992 }, "L": { "rate": 5.399247099353043, "BF": 1.054646137412308 }, "M": { "rate": 5.360892183847749, "BF": 1.052173210852881 }, "N": { "rate": 5.460853335450667, "BF": 1.056242713199856 }, "P": { "rate": 5.510283831687251, "BF": 1.052251670018238 }, "Q": { "rate": 5.572981961142519, "BF": 1.048393507216649 }, "R": { "rate": 5.23595482822548, "BF": 1.043196350198058 }, "S": { "rate": 5.132179930452413, "BF": 1.043211489710702 }, "T": { "rate": 5.257437895344924, "BF": 1.054166038490131 }, "V": { "rate": 4.327438172875143, "BF": 1.008197926357619 }, "W": { "rate": 5.631182577995646, "BF": 1.056784871287576 }, "Y": { "rate": 3.702706065555818, "BF": 0.9734089045235763 } } }, "12106": { "G": "ORF1a", "S": 3948, "index": 5, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTT": 32 } }, "aa": { "Reference": { "F": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.298403086637607, "BF": 0.9904628995183727 }, "C": { "rate": 3.966225283337353, "BF": 0.9258295047171716 }, "D": { "rate": 5.452775194992197, "BF": 0.9908076808181171 }, "E": { "rate": 5.511440690145103, "BF": 0.9908760240174069 }, "F": { "rate": 6.101854164249689, "BF": 1.053098124637936 }, "G": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "H": { "rate": 5.655818040146093, "BF": 0.9911228100914123 }, "I": { "rate": 5.455828813005708, "BF": 0.9918058189957282 }, "K": { "rate": 5.467476567309471, "BF": 0.9909464765986756 }, "L": { "rate": 2.901454954464303, "BF": 0.8773184143424232 }, "M": { "rate": 5.447593002246177, "BF": 0.9912273054434662 }, "N": { "rate": 5.496896826023274, "BF": 0.9906991659182434 }, "P": { "rate": 5.557168917044696, "BF": 0.9912727397187614 }, "Q": { "rate": 5.616557924882006, "BF": 0.991957123409493 }, "R": { "rate": 5.422954563085814, "BF": 0.9927767959481993 }, "S": { "rate": 5.229281356223368, "BF": 0.9927259482619157 }, "T": { "rate": 5.272591722409643, "BF": 0.9908241923079032 }, "V": { "rate": 5.534823957246684, "BF": 0.9918495194942628 }, "W": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "Y": { "rate": 5.505254340720596, "BF": 0.9904340909408749 } } }, "12109": { "G": "ORF1a", "S": 3949, "index": 6, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AGT": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12112": { "G": "ORF1a", "S": 3950, "index": 7, "bCFEL": { "p": 0, "a": 3.229642435228862, "b": { "background": 0, "B-1-617": 2.162021710309243, "Reference": 0.004452160407161729 }, "pi": { "overall": 0.869354800597471 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "TCC": 31, "TCT": 1 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 3.238107125504523, "b": 0, "p": 0.9560963156973498 }, "bMEME": { "p": 0.6666666666666666, "a": 3.192432742671397, "b+": 4.788649114007091, "w+": 0, "b-": 2.614421539287398, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 3.183060398629631, "b+": 4.774590597944442, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.04953574496877388, -0.3536675776484469, 0.880962199708396, 0.4033925671419755, 0.1204188200792286 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12115": { "G": "ORF1a", "S": 3951, "index": 8, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.170494633509469, "B-1-617": 0.2961869984298745, "Reference": 0 }, "pi": { "overall": 0.9875062279782896 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "CTT": 31, "TTT": 1 } }, "aa": { "Reference": { "L": 31, "F": 1 } }, "bFEL": { "a": 0, "b": 1.332038499257686, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.464518485321612, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.1864481881457208, "a": 0, "b+": 9.536088848783528, "w+": 0.9984574274506589, "b-": 0, "w-": 0.001542572549341103, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.09951441286794899, 1.323879892092505, 0.2196172646873195, 0.1504288706197217, 0.1853325884628318 ] }, "fade": { "A": { "rate": 5.317540422140158, "BF": 1.056141673876794 }, "C": { "rate": 3.89413822472564, "BF": 0.9842715797533866 }, "D": { "rate": 5.449468280288249, "BF": 1.055410784493207 }, "E": { "rate": 5.503602792383812, "BF": 1.054508537584484 }, "F": { "rate": 15.76105759556321, "BF": 2.202063554745674 }, "G": { "rate": 5.631174554695443, "BF": 1.056786476613593 }, "H": { "rate": 5.544320337614354, "BF": 1.054137936039658 }, "I": { "rate": 3.322690197485266, "BF": 0.9597091544978488 }, "K": { "rate": 5.450709649058304, "BF": 1.053420243226268 }, "L": { "rate": 0.5319981140886731, "BF": 0.6829851069681786 }, "M": { "rate": 5.358896825028072, "BF": 1.052137830488584 }, "N": { "rate": 5.462188327617639, "BF": 1.056308045500681 }, "P": { "rate": 5.510548853201493, "BF": 1.052273305630001 }, "Q": { "rate": 5.572735388515824, "BF": 1.04833005008783 }, "R": { "rate": 2.129389913629154, "BF": 0.86426140301056 }, "S": { "rate": 5.131105175260834, "BF": 1.042988822852809 }, "T": { "rate": 5.248091284079235, "BF": 1.053793703889755 }, "V": { "rate": 2.2848226088843, "BF": 0.8785014354363354 }, "W": { "rate": 5.631174554695443, "BF": 1.056786476613593 }, "Y": { "rate": 5.53998174185703, "BF": 1.057634402523261 } } }, "12118": { "G": "ORF1a", "S": 3952, "index": 9, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CCA": 32 } }, "aa": { "Reference": { "P": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296053746322004, "BF": 0.9955727079586607 }, "C": { "rate": 5.498351031454328, "BF": 0.9960164057843132 }, "D": { "rate": 5.451119511148701, "BF": 0.995990899866973 }, "E": { "rate": 5.50997251128387, "BF": 0.9960084168796826 }, "F": { "rate": 5.558767060138135, "BF": 0.9961238119307404 }, "G": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "H": { "rate": 5.64752089028078, "BF": 0.9962653990017573 }, "I": { "rate": 5.444728371289862, "BF": 0.9964627304324976 }, "K": { "rate": 5.465768805034076, "BF": 0.996014934317683 }, "L": { "rate": 5.420488467412673, "BF": 0.9959074427429486 }, "M": { "rate": 5.438699217276186, "BF": 0.9961062811647783 }, "N": { "rate": 5.49182007494402, "BF": 0.9959066687802539 }, "P": { "rate": 5.779401689247727, "BF": 1.025883534035666 }, "Q": { "rate": 5.613145293046783, "BF": 0.9966584426900124 }, "R": { "rate": 5.406869668974337, "BF": 0.9969709686994447 }, "S": { "rate": 3.623976851540414, "BF": 0.9188616283648366 }, "T": { "rate": 5.268899972816679, "BF": 0.99582057999198 }, "V": { "rate": 5.516619849813091, "BF": 0.9965375102562841 }, "W": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "Y": { "rate": 5.507121871836691, "BF": 0.9958375276237276 } } }, "12121": { "G": "ORF1a", "S": 3953, "index": 10, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCA": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12124": { "G": "ORF1a", "S": 3954, "index": 11, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TAT": 32 } }, "aa": { "Reference": { "Y": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.29728091323631, "BF": 0.9916852839786031 }, "C": { "rate": 5.500233947388757, "BF": 0.9921190450724822 }, "D": { "rate": 2.7705658525432, "BF": 0.867521716009261 }, "E": { "rate": 5.507771374403061, "BF": 0.9919922060106123 }, "F": { "rate": 5.561960154707541, "BF": 0.9922330191457844 }, "G": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "H": { "rate": 5.654165941607203, "BF": 0.9924071889090705 }, "I": { "rate": 5.453003319443125, "BF": 0.992968725871315 }, "K": { "rate": 5.466668549886556, "BF": 0.9921778383698461 }, "L": { "rate": 5.422623562879634, "BF": 0.992026953712027 }, "M": { "rate": 5.445289948452294, "BF": 0.9924189506591152 }, "N": { "rate": 5.495531372068572, "BF": 0.9919789288644772 }, "P": { "rate": 5.556097946486756, "BF": 0.9925025087577567 }, "Q": { "rate": 5.615833465624653, "BF": 0.9931441570055406 }, "R": { "rate": 5.419187091344193, "BF": 0.9938496583924854 }, "S": { "rate": 5.227658458645108, "BF": 0.9938528656747706 }, "T": { "rate": 5.270894584740484, "BF": 0.9920067705225797 }, "V": { "rate": 5.529004557818923, "BF": 0.9929577880117307 }, "W": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "Y": { "rate": 5.97474213822821, "BF": 1.047109046491042 } } }, "12127": { "G": "ORF1a", "S": 3955, "index": 12, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12130": { "G": "ORF1a", "S": 3956, "index": 13, "bCFEL": { "p": 0, "a": 6.636646908481298, "b": { "background": 0, "B-1-617": 1.139449512908137, "Reference": 6.624437421595782e-05 }, "pi": { "overall": 0.906603671841744 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "GCA": 1 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 6.598685982136248, "b": 0.2251722656465092, "p": 0.9406294756580599 }, "bMEME": { "p": 0.6666666666666666, "a": 6.613018745603487, "b+": 9.919528118405228, "w+": 0, "b-": 0.9469109242998108, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 6.482349627924372, "b+": 22.11982471081377, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.4022344790431069, 1.197779080102599, 0.3589760978791438, 0.1410881301787622, -0.7850618321090115 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12133": { "G": "ORF1a", "S": 3957, "index": 14, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.585093121716918, "B-1-617": 0.4689445336386987, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "TTT": 30, "TTA": 1, "TGT": 1 } }, "aa": { "Reference": { "F": 30, "L": 1, "C": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.4712554259319698, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2, "b-": 0, "w-": 0.8, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.3930843395219109, 0.2146143946643995, 1.161538175214766, -0.02607298415665098, -0.8791189616882017 ] }, "fade": { "A": { "rate": 5.298403086637607, "BF": 0.9904628995183751 }, "C": { "rate": 3.966225283337352, "BF": 0.9258295047171754 }, "D": { "rate": 5.452775194992197, "BF": 0.9908076808181215 }, "E": { "rate": 5.511440690145104, "BF": 0.9908760240174135 }, "F": { "rate": 6.101854164249687, "BF": 1.053098124637933 }, "G": { "rate": 5.630309113147049, "BF": 0.9906018142350335 }, "H": { "rate": 5.655818040146092, "BF": 0.9911228100914145 }, "I": { "rate": 5.455828813005709, "BF": 0.9918058189957326 }, "K": { "rate": 5.467476567309469, "BF": 0.9909464765986714 }, "L": { "rate": 2.901454954464303, "BF": 0.8773184143424214 }, "M": { "rate": 5.447593002246177, "BF": 0.9912273054434662 }, "N": { "rate": 5.496896826023273, "BF": 0.9906991659182391 }, "P": { "rate": 5.557168917044695, "BF": 0.9912727397187614 }, "Q": { "rate": 5.616557924882005, "BF": 0.9919571234094886 }, "R": { "rate": 5.422954563085813, "BF": 0.9927767959481993 }, "S": { "rate": 5.22928135622337, "BF": 0.9927259482619157 }, "T": { "rate": 5.272591722409642, "BF": 0.9908241923079032 }, "V": { "rate": 5.534823957246684, "BF": 0.9918495194942628 }, "W": { "rate": 5.630309113147049, "BF": 0.9906018142350335 }, "Y": { "rate": 5.505254340720596, "BF": 0.9904340909408726 } } }, "12136": { "G": "ORF1a", "S": 3958, "index": 15, "bCFEL": { "p": 0, "a": 6.636646908481298, "b": { "background": 0, "B-1-617": 1.139449512908137, "Reference": 6.624437421595782e-05 }, "pi": { "overall": 0.906603671841744 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "GCA": 1 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 6.598685982136248, "b": 0.2251722656465092, "p": 0.9406294756580599 }, "bMEME": { "p": 0.6666666666666666, "a": 6.613018745603487, "b+": 9.919528118405228, "w+": 0, "b-": 0.9469109242998108, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 6.482349627924372, "b+": 22.11982471081377, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.4022344790431069, 1.197779080102599, 0.3589760978791438, 0.1410881301787622, -0.7850618321090115 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12139": { "G": "ORF1a", "S": 3959, "index": 16, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ACT": 32 } }, "aa": { "Reference": { "T": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752964, "BF": 0.9898497761552533 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293545 }, "G": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345211 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848133 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618458 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292119, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218435, "BF": 0.9513404991941874 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886205, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928598, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12142": { "G": "ORF1a", "S": 3960, "index": 17, "bCFEL": { "p": 0, "a": 6.1753737985279, "b": { "background": 0, "B-1-617": 0.6747812225964546, "Reference": 0.0008286376705392658 }, "pi": { "overall": 0.9318895682175306 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "GCG": 1 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 6.158743797064303, "b": 0.2592752451004765, "p": 0.9429070828447497 }, "bMEME": { "p": 0.6666666666666666, "a": 6.184493076847391, "b+": 14.36467313781675, "w+": 0, "b-": 0.9840443673414764, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 6.13023477476708, "b+": 16.42683762241957, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.2520353509836328, 0.1107366238822934, 0.1524040518249381, 0.5017067831730544, 0.1728359761835464 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12145": { "G": "ORF1a", "S": 3961, "index": 18, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAA": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12148": { "G": "ORF1a", "S": 3962, "index": 19, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAA": 32 } }, "aa": { "Reference": { "E": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296766801760399, "BF": 0.9943458070207923 }, "C": { "rate": 5.499399324697862, "BF": 0.9948017262854116 }, "D": { "rate": 3.397446518904041, "BF": 0.8975257520564035 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963918, "BF": 0.9948901161096751 }, "G": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.995371068471626 }, "K": { "rate": 5.46578424575683, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086741 }, "M": { "rate": 5.441011577510821, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691489, "BF": 0.9950628048573733 }, "Q": { "rate": 5.614065259642484, "BF": 0.9955611406036415 }, "R": { "rate": 5.410594321510914, "BF": 0.995993439565471 }, "S": { "rate": 5.222126863350896, "BF": 0.9959650646773767 }, "T": { "rate": 5.268972983906978, "BF": 0.9945754984155376 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "Y": { "rate": 5.502868312066332, "BF": 0.9943716012482708 } } }, "12151": { "G": "ORF1a", "S": 3963, "index": 20, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.525862203077411, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9967237889019069 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "GTT": 1 } }, "aa": { "Reference": { "A": 31, "V": 1 } }, "bFEL": { "a": 0, "b": 1.212374231203373, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.640491119619624, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.1687479724774007, "a": 0, "b+": 11.25009627466926, "w+": 0.99999999, "b-": 0, "w-": 1e-08, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.3464427721141255, 0.2276891704052981, 0.3556536075671364, 0.1068123231090358, 0.2571589515668457 ] }, "fade": { "A": { "rate": 0.54739505123977, "BF": 0.7088967010586273 }, "C": { "rate": 5.451092108482828, "BF": 1.053573692978866 }, "D": { "rate": 4.43056498758499, "BF": 1.012845423010672 }, "E": { "rate": 5.501919308509174, "BF": 1.054373102606928 }, "F": { "rate": 5.516089373123917, "BF": 1.054894391828368 }, "G": { "rate": 5.631190936881837, "BF": 1.056783198821423 }, "H": { "rate": 5.546139769415334, "BF": 1.054212302443424 }, "I": { "rate": 5.295867078598183, "BF": 1.047258696019864 }, "K": { "rate": 5.460187724098309, "BF": 1.053823938960128 }, "L": { "rate": 4.42628666965533, "BF": 1.014095971329089 }, "M": { "rate": 4.364142961528684, "BF": 1.010407392888226 }, "N": { "rate": 5.419009429302648, "BF": 1.054328743863291 }, "P": { "rate": 5.481711856116784, "BF": 1.051034699606954 }, "Q": { "rate": 5.573240229573046, "BF": 1.048455258868412 }, "R": { "rate": 5.224718528505123, "BF": 1.042778890443042 }, "S": { "rate": 1.634441898373318, "BF": 0.793004212247716 }, "T": { "rate": 1.964593852222783, "BF": 0.8535552417968869 }, "V": { "rate": 19.36108752858124, "BF": 3.075544253387703 }, "W": { "rate": 5.631190936881837, "BF": 1.056783198821423 }, "Y": { "rate": 5.537831944865346, "BF": 1.057518637770357 } } }, "12154": { "G": "ORF1a", "S": 3964, "index": 21, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TAT": 32 } }, "aa": { "Reference": { "Y": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.29728091323631, "BF": 0.9916852839786031 }, "C": { "rate": 5.500233947388757, "BF": 0.9921190450724822 }, "D": { "rate": 2.7705658525432, "BF": 0.867521716009261 }, "E": { "rate": 5.507771374403061, "BF": 0.9919922060106123 }, "F": { "rate": 5.561960154707541, "BF": 0.9922330191457844 }, "G": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "H": { "rate": 5.654165941607203, "BF": 0.9924071889090705 }, "I": { "rate": 5.453003319443125, "BF": 0.992968725871315 }, "K": { "rate": 5.466668549886556, "BF": 0.9921778383698461 }, "L": { "rate": 5.422623562879634, "BF": 0.992026953712027 }, "M": { "rate": 5.445289948452294, "BF": 0.9924189506591152 }, "N": { "rate": 5.495531372068572, "BF": 0.9919789288644772 }, "P": { "rate": 5.556097946486756, "BF": 0.9925025087577567 }, "Q": { "rate": 5.615833465624653, "BF": 0.9931441570055406 }, "R": { "rate": 5.419187091344193, "BF": 0.9938496583924854 }, "S": { "rate": 5.227658458645108, "BF": 0.9938528656747706 }, "T": { "rate": 5.270894584740484, "BF": 0.9920067705225797 }, "V": { "rate": 5.529004557818923, "BF": 0.9929577880117307 }, "W": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "Y": { "rate": 5.97474213822821, "BF": 1.047109046491042 } } }, "12157": { "G": "ORF1a", "S": 3965, "index": 22, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.732340409070313, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9864042469335919 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAG": 31, "GAC": 1 } }, "aa": { "Reference": { "E": 31, "D": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.501598063392769, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2143369330499998, "b-": 0, "w-": 0.7856630669500002, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.6345463979548933, 0.1722685944219224, 1.128111851533095, -0.6910734187295019, 2.390142475570945 ] }, "fade": { "A": { "rate": 5.296766801760397, "BF": 0.9943458070207902 }, "C": { "rate": 5.499399324697861, "BF": 0.9948017262854116 }, "D": { "rate": 3.39744651890404, "BF": 0.8975257520564088 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963917, "BF": 0.9948901161096774 }, "G": { "rate": 5.630378309809327, "BF": 0.9946985599843422 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.9953710684716305 }, "K": { "rate": 5.465784245756831, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086763 }, "M": { "rate": 5.441011577510822, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691487, "BF": 0.995062804857369 }, "Q": { "rate": 5.614065259642486, "BF": 0.9955611406036459 }, "R": { "rate": 5.410594321510913, "BF": 0.9959934395654666 }, "S": { "rate": 5.222126863350898, "BF": 0.9959650646773767 }, "T": { "rate": 5.26897298390698, "BF": 0.9945754984155396 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809327, "BF": 0.9946985599843422 }, "Y": { "rate": 5.502868312066333, "BF": 0.9943716012482708 } } }, "12160": { "G": "ORF1a", "S": 3966, "index": 23, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAG": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12163": { "G": "ORF1a", "S": 3967, "index": 24, "bCFEL": { "p": 0, "a": 6.138037520514744, "b": { "background": 0, "B-1-617": 0.002569672061179798, "Reference": 0 }, "pi": { "overall": 0.966625447399751 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "GCC": 1 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 6.138362004166043, "b": 0.2445181781691473, "p": 0.9428832507411992 }, "bMEME": { "p": 0.6666666666666666, "a": 6.183281758268945, "b+": 20.13077820217984, "w+": 0, "b-": 0.7526223661612934, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 6.101386435319732, "b+": 19.61771276623135, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.2618940269421511, 0.6582503354300704, 1.050277083425478, -0.08424846335836793, -0.1357766893320302 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12166": { "G": "ORF1a", "S": 3968, "index": 25, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTT": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12169": { "G": "ORF1a", "S": 3969, "index": 26, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.524146157767697, "B-1-617": 0.7467703676904078, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "ACT": 1 } }, "aa": { "Reference": { "A": 31, "T": 1 } }, "bFEL": { "a": 0, "b": 0.5381482959007637, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.5512309724476928, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.25, "b-": 0, "w-": 0.75, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.6795819760143671, 1.040207016685132, -0.08929739409055948, 0.3064415455843166, 0.4137989676898545 ] }, "fade": { "A": { "rate": 5.610364998748899, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.994466237189888 }, "E": { "rate": 5.510132708435627, "BF": 0.9945028091670652 }, "F": { "rate": 5.559867791270369, "BF": 0.9946257870143629 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.6503237335955, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320676, "BF": 0.9950166923528526 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335723, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.994310611737293 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488099 }, "Q": { "rate": 5.614250453936482, "BF": 0.9953233423767881 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176022 }, "S": { "rate": 3.779539763899133, "BF": 0.9283086123730206 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571672, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605612 } } }, "12172": { "G": "ORF1a", "S": 3970, "index": 27, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAT": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12175": { "G": "ORF1a", "S": 3971, "index": 28, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GGT": 32 } }, "aa": { "Reference": { "G": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.303943343626898, "BF": 0.999999999999989 }, "C": { "rate": 5.499526082467291, "BF": 1.000000000000029 }, "D": { "rate": 5.454037872746061, "BF": 0.9999999999999912 }, "E": { "rate": 5.510873188572397, "BF": 0.9999999999999868 }, "F": { "rate": 5.557069898198082, "BF": 0.9999999999999868 }, "G": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "H": { "rate": 5.638879287936077, "BF": 1.000000000000007 }, "I": { "rate": 5.440675380904157, "BF": 0.9999999999999668 }, "K": { "rate": 5.467698255279878, "BF": 0.9999999999999978 }, "L": { "rate": 5.421653451555605, "BF": 1.000000000000016 }, "M": { "rate": 5.435883635201785, "BF": 0.9999999999999957 }, "N": { "rate": 5.492757544853293, "BF": 1 }, "P": { "rate": 5.550448129428749, "BF": 1.000000000000009 }, "Q": { "rate": 5.60991724478496, "BF": 0.9999999999999777 }, "R": { "rate": 5.3972641498492, "BF": 0.9999999999999825 }, "S": { "rate": 5.219294290186886, "BF": 1.000000000000035 }, "T": { "rate": 5.272906129177081, "BF": 0.9999999999999802 }, "V": { "rate": 5.503473971047593, "BF": 1.000000000000002 }, "W": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "Y": { "rate": 5.511101582685502, "BF": 0.9999999999999912 } } }, "12178": { "G": "ORF1a", "S": 3972, "index": 29, "bCFEL": { "p": 0, "a": 20.45569800257852, "b": { "background": 2.869360506651708, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.8631784781924842 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAT": 30, "GTT": 1, "GAC": 1 } }, "aa": { "Reference": { "D": 31, "V": 1 } }, "bFEL": { "a": 20.56274947956719, "b": 1.153771012915874, "p": 0.9029917493640262 }, "bMEME": { "p": 0.6666666666666666, "a": 20.55396794793096, "b+": 30.83095192189643, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 19.9380473313024, "b+": 0.9373179694184103, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.1787030911977786, -0.1086019453788971, -0.4050978384688558, 0.2124526460287185, -0.673135779718744 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713341 }, "D": { "rate": 5.912912328240324, "BF": 1.047531580305115 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112138 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.6303324863592, "BF": 0.9918610096420657 }, "H": { "rate": 5.654188136176656, "BF": 0.9923383208406154 }, "I": { "rate": 5.453202004879294, "BF": 0.9929079470197915 }, "K": { "rate": 5.466768659964323, "BF": 0.9921170469760199 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984957 }, "M": { "rate": 5.445321287159221, "BF": 0.9923550022717988 }, "N": { "rate": 5.495653271103142, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230476, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475304, "BF": 0.9930786587040844 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808672 }, "S": { "rate": 5.227943262286858, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870067, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363751 }, "W": { "rate": 5.6303324863592, "BF": 0.9918610096420657 }, "Y": { "rate": 3.652434354134082, "BF": 0.9103757075210628 } } }, "12181": { "G": "ORF1a", "S": 3973, "index": 30, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCT": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12184": { "G": "ORF1a", "S": 3974, "index": 31, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAA": 32 } }, "aa": { "Reference": { "E": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296766801760399, "BF": 0.9943458070207923 }, "C": { "rate": 5.499399324697862, "BF": 0.9948017262854116 }, "D": { "rate": 3.397446518904041, "BF": 0.8975257520564035 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963918, "BF": 0.9948901161096751 }, "G": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.995371068471626 }, "K": { "rate": 5.46578424575683, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086741 }, "M": { "rate": 5.441011577510821, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691489, "BF": 0.9950628048573733 }, "Q": { "rate": 5.614065259642484, "BF": 0.9955611406036415 }, "R": { "rate": 5.410594321510914, "BF": 0.995993439565471 }, "S": { "rate": 5.222126863350896, "BF": 0.9959650646773767 }, "T": { "rate": 5.268972983906978, "BF": 0.9945754984155376 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "Y": { "rate": 5.502868312066332, "BF": 0.9943716012482708 } } }, "12187": { "G": "ORF1a", "S": 3975, "index": 32, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTT": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12190": { "G": "ORF1a", "S": 3976, "index": 33, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTT": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12193": { "G": "ORF1a", "S": 3977, "index": 34, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CTT": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12196": { "G": "ORF1a", "S": 3978, "index": 35, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12199": { "G": "ORF1a", "S": 3979, "index": 36, "bCFEL": { "p": 1, "a": 11.83304129427042, "b": { "background": 0, "B-1-617": 3030.146710177266, "Reference": 0 }, "pi": { "overall": 0.00724053140174763 }, "pp": 0.25, "s": { "B-1-617": 1, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AAG": 30, "AAC": 1, "AAT": 1 } }, "aa": { "Reference": { "K": 30, "N": 2 } }, "bFEL": { "a": 12.332534670739, "b": 3469.599471446826, "p": 0.004833935152283808 }, "bMEME": { "p": 0.006668512759224421, "a": 11.94069241655939, "b+": 3408.05771887139, "w+": 0.99999999, "b-": 1.294861562443251, "w-": 1e-08, "br": 1 }, "lMEME": { "p": 0.6387332196335862, "a": 11.64306808727784, "b+": 14.25357030569616, "w+": 0.99999999, "b-": 0.4928820447193593, "w-": 1e-08, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 1.572130801493356, -3.41347440280111, 0.604745149073098, 15, 0.83611296255941 ] }, "fade": { "A": { "rate": 5.33473590231843, "BF": 1.057320253551461 }, "C": { "rate": 5.492041766270662, "BF": 1.055398651887498 }, "D": { "rate": 5.461330465612947, "BF": 1.055874009984147 }, "E": { "rate": 5.507700212507052, "BF": 1.054853142008906 }, "F": { "rate": 5.520664661583535, "BF": 1.054985806257684 }, "G": { "rate": 5.631124631298421, "BF": 1.056796465541031 }, "H": { "rate": 5.538821609128742, "BF": 1.05391751260829 }, "I": { "rate": 5.350195839339245, "BF": 1.049513639732502 }, "K": { "rate": 0.5348525892825802, "BF": 0.6828506085507858 }, "L": { "rate": 5.391648009163825, "BF": 1.054579536031663 }, "M": { "rate": 5.367201777348914, "BF": 1.052710534191106 }, "N": { "rate": 14.45233952449878, "BF": 1.976376468731551 }, "P": { "rate": 5.511140266063282, "BF": 1.052310340423804 }, "Q": { "rate": 5.571192668807563, "BF": 1.047951525225972 }, "R": { "rate": 1.892325504691147, "BF": 0.8373028060424812 }, "S": { "rate": 3.632543690325199, "BF": 0.9771023170080027 }, "T": { "rate": 5.256882568192753, "BF": 1.054562081398567 }, "V": { "rate": 5.312722740855728, "BF": 1.049542102045512 }, "W": { "rate": 5.631124631298421, "BF": 1.056796465541031 }, "Y": { "rate": 5.545436707438001, "BF": 1.057931469038925 } } }, "12202": { "G": "ORF1a", "S": 3980, "index": 37, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTG": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12205": { "G": "ORF1a", "S": 3981, "index": 38, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.197005952555818, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.984992303013053 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AAG": 31, "AAT": 1 } }, "aa": { "Reference": { "K": 31, "N": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 2.667290430871263, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2, "b-": 0, "w-": 0.8, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.01467357592763005, 1.061527192923924, -0.08361893300410453, -0.2532585366996872, 0.48406220510454 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.995029284431264 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.995401442965174 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292236 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969725, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328685, "BF": 0.9959613289811918 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725121 }, "L": { "rate": 5.419559847919817, "BF": 0.9952701927027606 }, "M": { "rate": 5.440114815348827, "BF": 0.9955710743867189 }, "N": { "rate": 4.029758694176491, "BF": 0.927222007837818 }, "P": { "rate": 5.553438591464291, "BF": 0.995692889939367 }, "Q": { "rate": 5.613580478107192, "BF": 0.996143292464501 }, "R": { "rate": 4.370491564219875, "BF": 0.9489520983604769 }, "S": { "rate": 5.219631074696791, "BF": 0.9964134919841596 }, "T": { "rate": 5.267800002993339, "BF": 0.995184606717612 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569029 }, "W": { "rate": 5.630387376969725, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341974, "BF": 0.9952231717922594 } } }, "12208": { "G": "ORF1a", "S": 3982, "index": 39, "bCFEL": { "p": 0, "a": 15.5072203666105, "b": { "background": 0, "B-1-617": 0.06830082577521719, "Reference": 0 }, "pi": { "overall": 0.9698119015081345 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AAG": 31, "AAA": 1 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 15.47421552854267, "b": 0.1366859327111816, "p": 0.9172165220913007 }, "bMEME": { "p": 0.6666666666666666, "a": 15.28765906802091, "b+": 0.9197801610675972, "w+": 0, "b-": 0.5510526648388843, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 15.41466934663608, "b+": 1.352835255829256, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.141220056164769, 0.1914003202153734, -0.5992493819694997, 0.2087929580717243, 0.3698721224741515 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12211": { "G": "ORF1a", "S": 3983, "index": 40, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCT": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12214": { "G": "ORF1a", "S": 3984, "index": 41, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTG": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12217": { "G": "ORF1a", "S": 3985, "index": 42, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAT": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12220": { "G": "ORF1a", "S": 3986, "index": 43, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTG": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12223": { "G": "ORF1a", "S": 3987, "index": 44, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCT": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12226": { "G": "ORF1a", "S": 3988, "index": 45, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12229": { "G": "ORF1a", "S": 3989, "index": 46, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCT": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12232": { "G": "ORF1a", "S": 3990, "index": 47, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAA": 32 } }, "aa": { "Reference": { "E": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296766801760399, "BF": 0.9943458070207923 }, "C": { "rate": 5.499399324697862, "BF": 0.9948017262854116 }, "D": { "rate": 3.397446518904041, "BF": 0.8975257520564035 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963918, "BF": 0.9948901161096751 }, "G": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.995371068471626 }, "K": { "rate": 5.46578424575683, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086741 }, "M": { "rate": 5.441011577510821, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691489, "BF": 0.9950628048573733 }, "Q": { "rate": 5.614065259642484, "BF": 0.9955611406036415 }, "R": { "rate": 5.410594321510914, "BF": 0.995993439565471 }, "S": { "rate": 5.222126863350896, "BF": 0.9959650646773767 }, "T": { "rate": 5.268972983906978, "BF": 0.9945754984155376 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "Y": { "rate": 5.502868312066332, "BF": 0.9943716012482708 } } }, "12235": { "G": "ORF1a", "S": 3991, "index": 48, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTT": 32 } }, "aa": { "Reference": { "F": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.298403086637607, "BF": 0.9904628995183727 }, "C": { "rate": 3.966225283337353, "BF": 0.9258295047171716 }, "D": { "rate": 5.452775194992197, "BF": 0.9908076808181171 }, "E": { "rate": 5.511440690145103, "BF": 0.9908760240174069 }, "F": { "rate": 6.101854164249689, "BF": 1.053098124637936 }, "G": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "H": { "rate": 5.655818040146093, "BF": 0.9911228100914123 }, "I": { "rate": 5.455828813005708, "BF": 0.9918058189957282 }, "K": { "rate": 5.467476567309471, "BF": 0.9909464765986756 }, "L": { "rate": 2.901454954464303, "BF": 0.8773184143424232 }, "M": { "rate": 5.447593002246177, "BF": 0.9912273054434662 }, "N": { "rate": 5.496896826023274, "BF": 0.9906991659182434 }, "P": { "rate": 5.557168917044696, "BF": 0.9912727397187614 }, "Q": { "rate": 5.616557924882006, "BF": 0.991957123409493 }, "R": { "rate": 5.422954563085814, "BF": 0.9927767959481993 }, "S": { "rate": 5.229281356223368, "BF": 0.9927259482619157 }, "T": { "rate": 5.272591722409643, "BF": 0.9908241923079032 }, "V": { "rate": 5.534823957246684, "BF": 0.9918495194942628 }, "W": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "Y": { "rate": 5.505254340720596, "BF": 0.9904340909408749 } } }, "12238": { "G": "ORF1a", "S": 3992, "index": 49, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAC": 32 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12241": { "G": "ORF1a", "S": 3993, "index": 50, "bCFEL": { "p": 0, "a": 0, "b": { "background": 1.96219769621343, "B-1-617": 1.575465255150986, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "CGT": 31, "CTT": 1 } }, "aa": { "Reference": { "R": 31, "L": 1 } }, "bFEL": { "a": 0, "b": 1.464737792323401, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.664161295283797, "w+": 0.2659999973399998, "b-": 0, "w-": 0.7340000026600002, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2083188839319999, "b-": 0, "w-": 0.7916811160680001, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.1618805399867843, 0.4220048705165958, 0.4271525136220899, -0.1588840789214494, 1.618475173402782 ] }, "fade": { "A": { "rate": 5.297166078672388, "BF": 0.9911493959817712 }, "C": { "rate": 5.500434640562123, "BF": 0.991585841723623 }, "D": { "rate": 5.452130525630916, "BF": 0.9915437195688176 }, "E": { "rate": 5.511033027253244, "BF": 0.9916045798023458 }, "F": { "rate": 5.562244829958904, "BF": 0.9916955472184713 }, "G": { "rate": 5.630325092947718, "BF": 0.9913781219887787 }, "H": { "rate": 5.654965622739419, "BF": 0.9918779376611659 }, "I": { "rate": 5.453622220150219, "BF": 0.9924629404087468 }, "K": { "rate": 3.897336474578887, "BF": 0.9242013119069379 }, "L": { "rate": 3.916974679298279, "BF": 0.9266864051379905 }, "M": { "rate": 5.446196937555808, "BF": 0.9919206723247622 }, "N": { "rate": 5.49572559695557, "BF": 0.991431493370428 }, "P": { "rate": 5.556539202291015, "BF": 0.9919928040823918 }, "Q": { "rate": 5.616169507503473, "BF": 0.9926586266384778 }, "R": { "rate": 5.888344497083168, "BF": 1.049388188575204 }, "S": { "rate": 5.228901827534437, "BF": 0.9934311064993726 }, "T": { "rate": 3.776243387866319, "BF": 0.9265170898999125 }, "V": { "rate": 5.532603915808143, "BF": 0.9925474577259604 }, "W": { "rate": 5.630325092947718, "BF": 0.9913781219887787 }, "Y": { "rate": 5.505231140018239, "BF": 0.9912001562806255 } } }, "12244": { "G": "ORF1a", "S": 3994, "index": 51, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAT": 32 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12247": { "G": "ORF1a", "S": 3995, "index": 52, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12250": { "G": "ORF1a", "S": 3996, "index": 53, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCC": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12253": { "G": "ORF1a", "S": 3997, "index": 54, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATG": 32 } }, "aa": { "Reference": { "M": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295694464017998, "BF": 0.9931789531276972 }, "C": { "rate": 5.49933555445904, "BF": 0.9936775133393744 }, "D": { "rate": 5.450785470203125, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038935, "BF": 0.993666169003468 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473639 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "H": { "rate": 5.651854692718327, "BF": 0.9939682921668517 }, "I": { "rate": 4.293117599260281, "BF": 0.9431000495340196 }, "K": { "rate": 5.465919722062229, "BF": 0.9936946431547333 }, "L": { "rate": 5.420955334666949, "BF": 0.9935371381867882 }, "M": { "rate": 5.801929782582542, "BF": 1.038460694372429 }, "N": { "rate": 5.493743359870732, "BF": 0.9935406054280892 }, "P": { "rate": 5.554582881326989, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586259 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.04321200455033, "BF": 0.9418781520036377 }, "T": { "rate": 5.268660696460636, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803954, "BF": 0.9387916660369791 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "Y": { "rate": 5.505736957895139, "BF": 0.9933735120480158 } } }, "12256": { "G": "ORF1a", "S": 3998, "index": 55, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAA": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12259": { "G": "ORF1a", "S": 3999, "index": 56, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CGT": 32 } }, "aa": { "Reference": { "R": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297166078672388, "BF": 0.9911493959817732 }, "C": { "rate": 5.500434640562124, "BF": 0.9915858417236296 }, "D": { "rate": 5.452130525630916, "BF": 0.9915437195688132 }, "E": { "rate": 5.511033027253244, "BF": 0.9916045798023414 }, "F": { "rate": 5.562244829958904, "BF": 0.9916955472184713 }, "G": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "H": { "rate": 5.654965622739422, "BF": 0.9918779376611659 }, "I": { "rate": 5.45362222015022, "BF": 0.9924629404087447 }, "K": { "rate": 3.897336474578887, "BF": 0.9242013119069398 }, "L": { "rate": 3.916974679298278, "BF": 0.9266864051379886 }, "M": { "rate": 5.446196937555809, "BF": 0.9919206723247644 }, "N": { "rate": 5.495725596955571, "BF": 0.991431493370428 }, "P": { "rate": 5.556539202291015, "BF": 0.991992804082394 }, "Q": { "rate": 5.616169507503474, "BF": 0.9926586266384735 }, "R": { "rate": 5.888344497083165, "BF": 1.049388188575201 }, "S": { "rate": 5.228901827534437, "BF": 0.993431106499377 }, "T": { "rate": 3.776243387866319, "BF": 0.9265170898999125 }, "V": { "rate": 5.532603915808142, "BF": 0.992547457725956 }, "W": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "Y": { "rate": 5.505231140018241, "BF": 0.9912001562806212 } } }, "12262": { "G": "ORF1a", "S": 4000, "index": 57, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAG": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12265": { "G": "ORF1a", "S": 4001, "index": 58, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTG": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12268": { "G": "ORF1a", "S": 4002, "index": 59, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAA": 32 } }, "aa": { "Reference": { "E": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296766801760399, "BF": 0.9943458070207923 }, "C": { "rate": 5.499399324697862, "BF": 0.9948017262854116 }, "D": { "rate": 3.397446518904041, "BF": 0.8975257520564035 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963918, "BF": 0.9948901161096751 }, "G": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.995371068471626 }, "K": { "rate": 5.46578424575683, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086741 }, "M": { "rate": 5.441011577510821, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691489, "BF": 0.9950628048573733 }, "Q": { "rate": 5.614065259642484, "BF": 0.9955611406036415 }, "R": { "rate": 5.410594321510914, "BF": 0.995993439565471 }, "S": { "rate": 5.222126863350896, "BF": 0.9959650646773767 }, "T": { "rate": 5.268972983906978, "BF": 0.9945754984155376 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "Y": { "rate": 5.502868312066332, "BF": 0.9943716012482708 } } }, "12271": { "G": "ORF1a", "S": 4003, "index": 60, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAG": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12274": { "G": "ORF1a", "S": 4004, "index": 61, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATG": 32 } }, "aa": { "Reference": { "M": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295694464017998, "BF": 0.9931789531276972 }, "C": { "rate": 5.49933555445904, "BF": 0.9936775133393744 }, "D": { "rate": 5.450785470203125, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038935, "BF": 0.993666169003468 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473639 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "H": { "rate": 5.651854692718327, "BF": 0.9939682921668517 }, "I": { "rate": 4.293117599260281, "BF": 0.9431000495340196 }, "K": { "rate": 5.465919722062229, "BF": 0.9936946431547333 }, "L": { "rate": 5.420955334666949, "BF": 0.9935371381867882 }, "M": { "rate": 5.801929782582542, "BF": 1.038460694372429 }, "N": { "rate": 5.493743359870732, "BF": 0.9935406054280892 }, "P": { "rate": 5.554582881326989, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586259 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.04321200455033, "BF": 0.9418781520036377 }, "T": { "rate": 5.268660696460636, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803954, "BF": 0.9387916660369791 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "Y": { "rate": 5.505736957895139, "BF": 0.9933735120480158 } } }, "12277": { "G": "ORF1a", "S": 4005, "index": 62, "bCFEL": { "p": 0, "a": 6.142239259843736, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9658107256738867 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "GCC": 1 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 6.138362004166043, "b": 0.2445181781691473, "p": 0.9428829076563918 }, "bMEME": { "p": 0.6666666666666666, "a": 6.183281758268945, "b+": 20.13077820217984, "w+": 0, "b-": 0.7526223661612934, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 6.101386435319732, "b+": 19.61771276623135, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.6857370610916009, 0.1185655057742294, -0.2459746692025252, 0.04449224604253502, 0.5914251547638932 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12280": { "G": "ORF1a", "S": 4006, "index": 63, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAT": 32 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12283": { "G": "ORF1a", "S": 4007, "index": 64, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAA": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12286": { "G": "ORF1a", "S": 4008, "index": 65, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCT": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12289": { "G": "ORF1a", "S": 4009, "index": 66, "bCFEL": { "p": 0, "a": 0, "b": { "background": 1.692063018416472, "B-1-617": 0.4337954874831223, "Reference": 0 }, "pi": { "overall": 0.9397342242479334 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ATG": 31, "GTG": 1 } }, "aa": { "Reference": { "M": 31, "V": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0.5786937196373596, "b+": 1.004916925444439, "w+": 0, "b-": 0.1446734299093399, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6179745342530233, "a": 0.479627555401122, "b+": 7.468415506467762, "w+": 0.99, "b-": 0.02410128465890638, "w-": 0.01, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.1727875502949552, 0.3186283160044413, -0.3449112262681385, 0.6352356008790669, 0.3382958499338234 ] }, "fade": { "A": { "rate": 4.363726830895611, "BF": 1.015409323566732 }, "C": { "rate": 5.477672520935528, "BF": 1.054786943515441 }, "D": { "rate": 4.51845528010332, "BF": 1.016650534445631 }, "E": { "rate": 5.495737979221934, "BF": 1.053852001298601 }, "F": { "rate": 5.511410487405577, "BF": 1.05481404144507 }, "G": { "rate": 5.631266471309536, "BF": 1.056768085938691 }, "H": { "rate": 5.554462220688229, "BF": 1.054546350542882 }, "I": { "rate": 2.06215154953119, "BF": 0.8451502987267525 }, "K": { "rate": 5.450200438873157, "BF": 1.053172239215455 }, "L": { "rate": 4.510471635210004, "BF": 1.017249760116417 }, "M": { "rate": 0.5549298748576538, "BF": 0.7156027019363094 }, "N": { "rate": 5.444013002651594, "BF": 1.055426534055464 }, "P": { "rate": 5.504125605573401, "BF": 1.051974700375167 }, "Q": { "rate": 5.57557706987834, "BF": 1.049029562544623 }, "R": { "rate": 5.227577472618185, "BF": 1.043557850248309 }, "S": { "rate": 1.912427122797545, "BF": 0.836597053135621 }, "T": { "rate": 5.222620194438489, "BF": 1.051816763322847 }, "V": { "rate": 16.96303089902195, "BF": 2.407934730094631 }, "W": { "rate": 5.631266471309536, "BF": 1.056768085938691 }, "Y": { "rate": 5.529602305183091, "BF": 1.057070439208623 } } }, "12292": { "G": "ORF1a", "S": 4010, "index": 67, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ACC": 32 } }, "aa": { "Reference": { "T": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752964, "BF": 0.9898497761552533 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293545 }, "G": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345211 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848133 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618458 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292119, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218435, "BF": 0.9513404991941874 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886205, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928598, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12295": { "G": "ORF1a", "S": 4011, "index": 68, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAA": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12298": { "G": "ORF1a", "S": 4012, "index": 69, "bCFEL": { "p": 0, "a": 0.9922672528050931, "b": { "background": 1.686153897880079, "B-1-617": 0.02862512334425974, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ATG": 31, "ATA": 1 } }, "aa": { "Reference": { "M": 31, "I": 1 } }, "bFEL": { "a": 10000, "b": 0.0600875449979046, "p": 0.3461280740416711 }, "bMEME": { "p": 0.6666666666666666, "a": 1.129710780017527, "b+": 2.114127269504442, "w+": 0, "b-": 0.9171597633136092, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 9999.99999999834, "b+": 8.991008991008995, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.2575107646025272, -0.4590553134523093, -0.01966378774215988, 0.2091468335218698, -0.04074479375795732 ] }, "fade": { "A": { "rate": 5.295694464017997, "BF": 0.9931789531276907 }, "C": { "rate": 5.499335554459042, "BF": 0.9936775133393764 }, "D": { "rate": 5.450785470203124, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038936, "BF": 0.9936661690034703 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473619 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121466 }, "H": { "rate": 5.651854692718328, "BF": 0.9939682921668496 }, "I": { "rate": 4.29311759926028, "BF": 0.9431000495340178 }, "K": { "rate": 5.46591972206223, "BF": 0.9936946431547355 }, "L": { "rate": 5.42095533466695, "BF": 0.9935371381867925 }, "M": { "rate": 5.80192978258254, "BF": 1.038460694372434 }, "N": { "rate": 5.49374335987073, "BF": 0.9935406054280849 }, "P": { "rate": 5.55458288132699, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586194 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.043212004550329, "BF": 0.9418781520036337 }, "T": { "rate": 5.268660696460637, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803953, "BF": 0.9387916660369751 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121466 }, "Y": { "rate": 5.50573695789514, "BF": 0.993373512048018 } } }, "12301": { "G": "ORF1a", "S": 4013, "index": 70, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TAT": 32 } }, "aa": { "Reference": { "Y": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.29728091323631, "BF": 0.9916852839786031 }, "C": { "rate": 5.500233947388757, "BF": 0.9921190450724822 }, "D": { "rate": 2.7705658525432, "BF": 0.867521716009261 }, "E": { "rate": 5.507771374403061, "BF": 0.9919922060106123 }, "F": { "rate": 5.561960154707541, "BF": 0.9922330191457844 }, "G": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "H": { "rate": 5.654165941607203, "BF": 0.9924071889090705 }, "I": { "rate": 5.453003319443125, "BF": 0.992968725871315 }, "K": { "rate": 5.466668549886556, "BF": 0.9921778383698461 }, "L": { "rate": 5.422623562879634, "BF": 0.992026953712027 }, "M": { "rate": 5.445289948452294, "BF": 0.9924189506591152 }, "N": { "rate": 5.495531372068572, "BF": 0.9919789288644772 }, "P": { "rate": 5.556097946486756, "BF": 0.9925025087577567 }, "Q": { "rate": 5.615833465624653, "BF": 0.9931441570055406 }, "R": { "rate": 5.419187091344193, "BF": 0.9938496583924854 }, "S": { "rate": 5.227658458645108, "BF": 0.9938528656747706 }, "T": { "rate": 5.270894584740484, "BF": 0.9920067705225797 }, "V": { "rate": 5.529004557818923, "BF": 0.9929577880117307 }, "W": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "Y": { "rate": 5.97474213822821, "BF": 1.047109046491042 } } }, "12304": { "G": "ORF1a", "S": 4014, "index": 71, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12307": { "G": "ORF1a", "S": 4015, "index": 72, "bCFEL": { "p": 0, "a": 15.49048275885172, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9733919429509413 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "CAG": 31, "CAA": 1 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 15.57863687176358, "b": 0.14470798181776, "p": 0.9127382212825174 }, "bMEME": { "p": 0.6666666666666666, "a": 15.27508756397395, "b+": 0.9197194398204643, "w+": 0, "b-": 1.103507670905478, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 15.53508399982976, "b+": 23.3026259997447, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.6357574465966143, 0.2807163127061337, 0.2031819770094125, 0.3001855321622762, -0.0814314415956256 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12310": { "G": "ORF1a", "S": 4016, "index": 73, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.529401737682274, "B-1-617": 0.8317478715977954, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCT": 31, "TCT": 1 } }, "aa": { "Reference": { "A": 31, "S": 1 } }, "bFEL": { "a": 0, "b": 0.3002103330212254, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.3002103330212254, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2, "b-": 0, "w-": 0.8, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.2933150298713428, 0.9221122812122359, 0.5197219092866691, 0.28651806815879, 0.3893442450269322 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241128 }, "C": { "rate": 5.497357704096384, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769897, "BF": 0.9944662371898947 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.559867791270369, "BF": 0.9946257870143629 }, "G": { "rate": 5.630374286370276, "BF": 0.9944235151533182 }, "H": { "rate": 5.6503237335955, "BF": 0.9947910585723301 }, "I": { "rate": 5.445463813320675, "BF": 0.9950166923528482 }, "K": { "rate": 5.465835253887163, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335725, "BF": 0.9943870241394073 }, "M": { "rate": 5.439729962976313, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723752, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936482, "BF": 0.9953233423767859 }, "R": { "rate": 5.41083362770086, "BF": 0.9957577535176022 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730188 }, "T": { "rate": 4.263831753219311, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797914 }, "W": { "rate": 5.630374286370276, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605612 } } }, "12313": { "G": "ORF1a", "S": 4017, "index": 74, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AGA": 32 } }, "aa": { "Reference": { "R": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297166078672388, "BF": 0.9911493959817732 }, "C": { "rate": 5.500434640562124, "BF": 0.9915858417236296 }, "D": { "rate": 5.452130525630916, "BF": 0.9915437195688132 }, "E": { "rate": 5.511033027253244, "BF": 0.9916045798023414 }, "F": { "rate": 5.562244829958904, "BF": 0.9916955472184713 }, "G": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "H": { "rate": 5.654965622739422, "BF": 0.9918779376611659 }, "I": { "rate": 5.45362222015022, "BF": 0.9924629404087447 }, "K": { "rate": 3.897336474578887, "BF": 0.9242013119069398 }, "L": { "rate": 3.916974679298278, "BF": 0.9266864051379886 }, "M": { "rate": 5.446196937555809, "BF": 0.9919206723247644 }, "N": { "rate": 5.495725596955571, "BF": 0.991431493370428 }, "P": { "rate": 5.556539202291015, "BF": 0.991992804082394 }, "Q": { "rate": 5.616169507503474, "BF": 0.9926586266384735 }, "R": { "rate": 5.888344497083165, "BF": 1.049388188575201 }, "S": { "rate": 5.228901827534437, "BF": 0.993431106499377 }, "T": { "rate": 3.776243387866319, "BF": 0.9265170898999125 }, "V": { "rate": 5.532603915808142, "BF": 0.992547457725956 }, "W": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "Y": { "rate": 5.505231140018241, "BF": 0.9912001562806212 } } }, "12316": { "G": "ORF1a", "S": 4018, "index": 75, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.319498114533182, "B-1-617": 0.04144050098586084, "Reference": 0 }, "pi": { "overall": 0.9928070378879535 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "TCT": 31, "TGT": 1 } }, "aa": { "Reference": { "S": 31, "C": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.507974392107734, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.25, "b-": 0, "w-": 0.75, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.3594160579861987, 0.2576042076908743, 0.2787933154180046, 0.7064358243826948, 0.6579205240578683 ] }, "fade": { "A": { "rate": 3.322389843556959, "BF": 0.9037272813595921 }, "C": { "rate": 4.366082190335632, "BF": 0.9431262104330598 }, "D": { "rate": 5.453893629245234, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.989710499154685 }, "F": { "rate": 5.563016123674314, "BF": 0.9896978719675334 }, "G": { "rate": 5.630282013980453, "BF": 0.9893591451068833 }, "H": { "rate": 5.657056038170457, "BF": 0.989909792756326 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166264 }, "K": { "rate": 5.468215577575891, "BF": 0.9897913317628344 }, "L": { "rate": 5.42527464930169, "BF": 0.9896511415618324 }, "M": { "rate": 4.650117668837576, "BF": 0.957701863965924 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239639, "BF": 0.9563852607273933 }, "Q": { "rate": 5.617138637153661, "BF": 0.9908254855327849 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360915 }, "S": { "rate": 5.802174530453117, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353916999, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852041, "BF": 0.9907512023970336 }, "W": { "rate": 5.630282013980453, "BF": 0.9893591451068833 }, "Y": { "rate": 5.505373732544824, "BF": 0.9892111452795548 } } }, "12319": { "G": "ORF1a", "S": 4019, "index": 76, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAG": 32 } }, "aa": { "Reference": { "E": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296766801760399, "BF": 0.9943458070207923 }, "C": { "rate": 5.499399324697862, "BF": 0.9948017262854116 }, "D": { "rate": 3.397446518904041, "BF": 0.8975257520564035 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963918, "BF": 0.9948901161096751 }, "G": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.995371068471626 }, "K": { "rate": 5.46578424575683, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086741 }, "M": { "rate": 5.441011577510821, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691489, "BF": 0.9950628048573733 }, "Q": { "rate": 5.614065259642484, "BF": 0.9955611406036415 }, "R": { "rate": 5.410594321510914, "BF": 0.995993439565471 }, "S": { "rate": 5.222126863350896, "BF": 0.9959650646773767 }, "T": { "rate": 5.268972983906978, "BF": 0.9945754984155376 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "Y": { "rate": 5.502868312066332, "BF": 0.9943716012482708 } } }, "12322": { "G": "ORF1a", "S": 4020, "index": 77, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAC": 32 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12325": { "G": "ORF1a", "S": 4021, "index": 78, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAG": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12328": { "G": "ORF1a", "S": 4022, "index": 79, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AGG": 32 } }, "aa": { "Reference": { "R": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297166078672388, "BF": 0.9911493959817732 }, "C": { "rate": 5.500434640562124, "BF": 0.9915858417236296 }, "D": { "rate": 5.452130525630916, "BF": 0.9915437195688132 }, "E": { "rate": 5.511033027253244, "BF": 0.9916045798023414 }, "F": { "rate": 5.562244829958904, "BF": 0.9916955472184713 }, "G": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "H": { "rate": 5.654965622739422, "BF": 0.9918779376611659 }, "I": { "rate": 5.45362222015022, "BF": 0.9924629404087447 }, "K": { "rate": 3.897336474578887, "BF": 0.9242013119069398 }, "L": { "rate": 3.916974679298278, "BF": 0.9266864051379886 }, "M": { "rate": 5.446196937555809, "BF": 0.9919206723247644 }, "N": { "rate": 5.495725596955571, "BF": 0.991431493370428 }, "P": { "rate": 5.556539202291015, "BF": 0.991992804082394 }, "Q": { "rate": 5.616169507503474, "BF": 0.9926586266384735 }, "R": { "rate": 5.888344497083165, "BF": 1.049388188575201 }, "S": { "rate": 5.228901827534437, "BF": 0.993431106499377 }, "T": { "rate": 3.776243387866319, "BF": 0.9265170898999125 }, "V": { "rate": 5.532603915808142, "BF": 0.992547457725956 }, "W": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "Y": { "rate": 5.505231140018241, "BF": 0.9912001562806212 } } }, "12331": { "G": "ORF1a", "S": 4023, "index": 80, "bCFEL": { "p": 0, "a": 0, "b": { "background": 5.298353743328299, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9918665304379798 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCA": 30, "ACA": 1, "TCA": 1 } }, "aa": { "Reference": { "A": 30, "T": 1, "S": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.266997878275073, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.8624000767201019, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.2409631373193451, -0.288144673453706, -0.2869762055871761, 0.05773058590485474, 0.06759963226787809 ] }, "fade": { "A": { "rate": 5.610364998748901, "BF": 1.034072300241128 }, "C": { "rate": 5.497357704096384, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.994466237189888 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670675 }, "F": { "rate": 5.559867791270369, "BF": 0.9946257870143629 }, "G": { "rate": 5.630374286370277, "BF": 0.9944235151533204 }, "H": { "rate": 5.6503237335955, "BF": 0.9947910585723301 }, "I": { "rate": 5.445463813320677, "BF": 0.9950166923528526 }, "K": { "rate": 5.465835253887163, "BF": 0.9945229936243108 }, "L": { "rate": 5.420863800335724, "BF": 0.9943870241394073 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.994310611737293 }, "P": { "rate": 5.552560174723752, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936482, "BF": 0.9953233423767859 }, "R": { "rate": 5.41083362770086, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730206 }, "T": { "rate": 4.263831753219311, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370277, "BF": 0.9944235151533204 }, "Y": { "rate": 5.506209829712968, "BF": 0.9942539853605589 } } }, "12334": { "G": "ORF1a", "S": 4024, "index": 81, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12337": { "G": "ORF1a", "S": 4025, "index": 82, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.32993960310445, "B-1-617": 0.03925147582932535, "Reference": 0 }, "pi": { "overall": 0.9873005963656539 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GTT": 31, "CTT": 1 } }, "aa": { "Reference": { "V": 31, "L": 1 } }, "bFEL": { "a": 0, "b": 1.362355024782405, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.358147735140135, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.25, "b-": 0, "w-": 0.75, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.2004553720026996, 0.671631263016662, 0.847778171343791, 0.3328138335272307, 0.00795309362672247 ] }, "fade": { "A": { "rate": 4.307287808565801, "BF": 0.9496700143349242 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.9493282199336381 }, "E": { "rate": 5.509851799452623, "BF": 0.9938742754352268 }, "F": { "rate": 5.560143216964588, "BF": 0.9940086524498177 }, "G": { "rate": 5.630365837398949, "BF": 0.9937884292205711 }, "H": { "rate": 5.651476866419777, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065481, "BF": 0.9945666362420437 }, "K": { "rate": 5.465857752999176, "BF": 0.993915196760248 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905761, "BF": 0.9506015614132678 }, "N": { "rate": 5.49389132835334, "BF": 0.9937824664749221 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235334975 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095043 }, "R": { "rate": 5.413173560239498, "BF": 0.9952941890206026 }, "S": { "rate": 5.222993642425732, "BF": 0.9952536306653186 }, "T": { "rate": 5.269045899949441, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.630365837398949, "BF": 0.9937884292205711 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12340": { "G": "ORF1a", "S": 4026, "index": 83, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ACT": 32 } }, "aa": { "Reference": { "T": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752964, "BF": 0.9898497761552533 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293545 }, "G": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345211 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848133 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618458 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292119, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218435, "BF": 0.9513404991941874 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886205, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928598, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12343": { "G": "ORF1a", "S": 4027, "index": 84, "bCFEL": { "p": 0, "a": 0, "b": { "background": 4.238961562619959, "B-1-617": 1.383565947837822, "Reference": 0.0006564755206712942 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AGT": 31, "ATG": 1 } }, "aa": { "Reference": { "S": 31, "M": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0.4526866128384942, "b+": 1.017497224439835, "w+": 0.3011819969881799, "b-": 0.3718393063689521, "w-": 0.6988180030118201, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.206324331421, "b-": 0, "w-": 0.793675668579, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.3074071969443506, 0.6866130010821937, 0.191735016509868, -0.3440428884464239, 0.2788189333211322 ] }, "fade": { "A": { "rate": 3.322389843556959, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335632, "BF": 0.9431262104330658 }, "D": { "rate": 5.453893629245234, "BF": 0.9896311118162195 }, "E": { "rate": 5.512135355708926, "BF": 0.989710499154685 }, "F": { "rate": 5.563016123674312, "BF": 0.9896978719675269 }, "G": { "rate": 5.630282013980453, "BF": 0.9893591451068854 }, "H": { "rate": 5.657056038170457, "BF": 0.989909792756326 }, "I": { "rate": 4.759868340650388, "BF": 0.9624258504166285 }, "K": { "rate": 5.46821557757589, "BF": 0.9897913317628323 }, "L": { "rate": 5.42527464930169, "BF": 0.9896511415618324 }, "M": { "rate": 4.650117668837575, "BF": 0.9577018639659259 }, "N": { "rate": 4.238524803701698, "BF": 0.937547627126646 }, "P": { "rate": 4.719921583239639, "BF": 0.9563852607273974 }, "Q": { "rate": 5.617138637153662, "BF": 0.990825485532787 }, "R": { "rate": 5.427343151346689, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.058385092902142 }, "T": { "rate": 5.274141353917, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.9907512023970357 }, "W": { "rate": 5.630282013980453, "BF": 0.9893591451068854 }, "Y": { "rate": 5.505373732544824, "BF": 0.9892111452795506 } } }, "12346": { "G": "ORF1a", "S": 4028, "index": 85, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCT": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12349": { "G": "ORF1a", "S": 4029, "index": 86, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATG": 32 } }, "aa": { "Reference": { "M": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295694464017998, "BF": 0.9931789531276972 }, "C": { "rate": 5.49933555445904, "BF": 0.9936775133393744 }, "D": { "rate": 5.450785470203125, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038935, "BF": 0.993666169003468 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473639 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "H": { "rate": 5.651854692718327, "BF": 0.9939682921668517 }, "I": { "rate": 4.293117599260281, "BF": 0.9431000495340196 }, "K": { "rate": 5.465919722062229, "BF": 0.9936946431547333 }, "L": { "rate": 5.420955334666949, "BF": 0.9935371381867882 }, "M": { "rate": 5.801929782582542, "BF": 1.038460694372429 }, "N": { "rate": 5.493743359870732, "BF": 0.9935406054280892 }, "P": { "rate": 5.554582881326989, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586259 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.04321200455033, "BF": 0.9418781520036377 }, "T": { "rate": 5.268660696460636, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803954, "BF": 0.9387916660369791 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "Y": { "rate": 5.505736957895139, "BF": 0.9933735120480158 } } }, "12352": { "G": "ORF1a", "S": 4030, "index": 87, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.775976834009799, "B-1-617": 0.1697290282745423, "Reference": 0 }, "pi": { "overall": 0.9671678247668708 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "CAG": 31, "CAC": 1 } }, "aa": { "Reference": { "Q": 31, "H": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2, "b-": 0, "w-": 0.8, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2062822083399997, "b-": 0, "w-": 0.7937177916600003, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.2595474939699753, -0.4165608331875593, 0.2480911331244882, 0.7506375700332563, 0.3806075909167843 ] }, "fade": { "A": { "rate": 5.303882348573907, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917463, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314669, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186755, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275628 }, "G": { "rate": 5.630423479428781, "BF": 0.9992210612714993 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321514 }, "I": { "rate": 5.44206564236492, "BF": 0.9993179206527799 }, "K": { "rate": 5.46785150749194, "BF": 0.999258391654009 }, "L": { "rate": 5.422023468184567, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.49324750302939, "BF": 0.9992349349210327 }, "P": { "rate": 5.551013914888168, "BF": 0.9992763753310646 }, "Q": { "rate": 5.64921839831701, "BF": 1.006490366504603 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980042 }, "S": { "rate": 5.220584763880213, "BF": 0.9993977218199446 }, "T": { "rate": 5.273227803145427, "BF": 0.9992617906228569 }, "V": { "rate": 5.506003936427004, "BF": 0.9993182120878656 }, "W": { "rate": 5.630423479428781, "BF": 0.9992210612714993 }, "Y": { "rate": 5.510780183664956, "BF": 0.9992143407892081 } } }, "12355": { "G": "ORF1a", "S": 4031, "index": 88, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.723229850445897, "B-1-617": 0.2599250657679609, "Reference": 0 }, "pi": { "overall": 0.982699093997216 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ACA": 31, "ATA": 1 } }, "aa": { "Reference": { "T": 31, "I": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.938326252496763, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2, "b-": 0, "w-": 0.8, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.6400244441468755, 0.4732846676756352, 0.1327537716102745, 0.4343561916421816, 0.7295929086587101 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967297, "BF": 0.9898648628886852 }, "D": { "rate": 5.453737698752965, "BF": 0.9898497761552576 }, "E": { "rate": 5.512031373721819, "BF": 0.9899268663129607 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293522 }, "G": { "rate": 5.630286273202465, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241797, "BF": 0.9901317519345341 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212062, "BF": 0.9900039382088845 }, "L": { "rate": 5.424121714948565, "BF": 0.9898279843848176 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618436 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292118, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035613, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218434, "BF": 0.9513404991941813 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405753 }, "T": { "rate": 5.852992916886204, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928597, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202465, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12358": { "G": "ORF1a", "S": 4032, "index": 89, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATG": 32 } }, "aa": { "Reference": { "M": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295694464017998, "BF": 0.9931789531276972 }, "C": { "rate": 5.49933555445904, "BF": 0.9936775133393744 }, "D": { "rate": 5.450785470203125, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038935, "BF": 0.993666169003468 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473639 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "H": { "rate": 5.651854692718327, "BF": 0.9939682921668517 }, "I": { "rate": 4.293117599260281, "BF": 0.9431000495340196 }, "K": { "rate": 5.465919722062229, "BF": 0.9936946431547333 }, "L": { "rate": 5.420955334666949, "BF": 0.9935371381867882 }, "M": { "rate": 5.801929782582542, "BF": 1.038460694372429 }, "N": { "rate": 5.493743359870732, "BF": 0.9935406054280892 }, "P": { "rate": 5.554582881326989, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586259 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.04321200455033, "BF": 0.9418781520036377 }, "T": { "rate": 5.268660696460636, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803954, "BF": 0.9387916660369791 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "Y": { "rate": 5.505736957895139, "BF": 0.9933735120480158 } } }, "12361": { "G": "ORF1a", "S": 4033, "index": 90, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CTT": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12364": { "G": "ORF1a", "S": 4034, "index": 91, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTC": 32 } }, "aa": { "Reference": { "F": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.298403086637607, "BF": 0.9904628995183727 }, "C": { "rate": 3.966225283337353, "BF": 0.9258295047171716 }, "D": { "rate": 5.452775194992197, "BF": 0.9908076808181171 }, "E": { "rate": 5.511440690145103, "BF": 0.9908760240174069 }, "F": { "rate": 6.101854164249689, "BF": 1.053098124637936 }, "G": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "H": { "rate": 5.655818040146093, "BF": 0.9911228100914123 }, "I": { "rate": 5.455828813005708, "BF": 0.9918058189957282 }, "K": { "rate": 5.467476567309471, "BF": 0.9909464765986756 }, "L": { "rate": 2.901454954464303, "BF": 0.8773184143424232 }, "M": { "rate": 5.447593002246177, "BF": 0.9912273054434662 }, "N": { "rate": 5.496896826023274, "BF": 0.9906991659182434 }, "P": { "rate": 5.557168917044696, "BF": 0.9912727397187614 }, "Q": { "rate": 5.616557924882006, "BF": 0.991957123409493 }, "R": { "rate": 5.422954563085814, "BF": 0.9927767959481993 }, "S": { "rate": 5.229281356223368, "BF": 0.9927259482619157 }, "T": { "rate": 5.272591722409643, "BF": 0.9908241923079032 }, "V": { "rate": 5.534823957246684, "BF": 0.9918495194942628 }, "W": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "Y": { "rate": 5.505254340720596, "BF": 0.9904340909408749 } } }, "12367": { "G": "ORF1a", "S": 4035, "index": 92, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ACT": 32 } }, "aa": { "Reference": { "T": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752964, "BF": 0.9898497761552533 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293545 }, "G": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345211 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848133 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618458 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292119, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218435, "BF": 0.9513404991941874 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886205, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928598, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12370": { "G": "ORF1a", "S": 4036, "index": 93, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATG": 32 } }, "aa": { "Reference": { "M": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295694464017998, "BF": 0.9931789531276972 }, "C": { "rate": 5.49933555445904, "BF": 0.9936775133393744 }, "D": { "rate": 5.450785470203125, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038935, "BF": 0.993666169003468 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473639 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "H": { "rate": 5.651854692718327, "BF": 0.9939682921668517 }, "I": { "rate": 4.293117599260281, "BF": 0.9431000495340196 }, "K": { "rate": 5.465919722062229, "BF": 0.9936946431547333 }, "L": { "rate": 5.420955334666949, "BF": 0.9935371381867882 }, "M": { "rate": 5.801929782582542, "BF": 1.038460694372429 }, "N": { "rate": 5.493743359870732, "BF": 0.9935406054280892 }, "P": { "rate": 5.554582881326989, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586259 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.04321200455033, "BF": 0.9418781520036377 }, "T": { "rate": 5.268660696460636, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803954, "BF": 0.9387916660369791 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "Y": { "rate": 5.505736957895139, "BF": 0.9933735120480158 } } }, "12373": { "G": "ORF1a", "S": 4037, "index": 94, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CTT": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12376": { "G": "ORF1a", "S": 4038, "index": 95, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.857806383268142, "B-1-617": 0.8922869626267136, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AGA": 31, "AAA": 1 } }, "aa": { "Reference": { "R": 31, "K": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.1049473027672059, "w+": 0.2509849974901499, "b-": 0, "w-": 0.7490150025098501, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2062822083399997, "b-": 0, "w-": 0.7937177916600003, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 7.712515808112293, -0.002712850932269675, 0.1624977107040588, 0.4715862624215356, -0.08783874051398359 ] }, "fade": { "A": { "rate": 5.297166078672388, "BF": 0.9911493959817732 }, "C": { "rate": 5.500434640562126, "BF": 0.9915858417236296 }, "D": { "rate": 5.452130525630916, "BF": 0.9915437195688132 }, "E": { "rate": 5.511033027253243, "BF": 0.9916045798023414 }, "F": { "rate": 5.562244829958902, "BF": 0.991695547218467 }, "G": { "rate": 5.630325092947718, "BF": 0.9913781219887787 }, "H": { "rate": 5.654965622739419, "BF": 0.9918779376611659 }, "I": { "rate": 5.453622220150219, "BF": 0.9924629404087468 }, "K": { "rate": 3.897336474578887, "BF": 0.9242013119069359 }, "L": { "rate": 3.916974679298278, "BF": 0.9266864051379847 }, "M": { "rate": 5.446196937555808, "BF": 0.9919206723247644 }, "N": { "rate": 5.495725596955571, "BF": 0.9914314933704301 }, "P": { "rate": 5.556539202291015, "BF": 0.9919928040823897 }, "Q": { "rate": 5.616169507503474, "BF": 0.9926586266384778 }, "R": { "rate": 5.888344497083166, "BF": 1.049388188575199 }, "S": { "rate": 5.228901827534437, "BF": 0.9934311064993726 }, "T": { "rate": 3.776243387866318, "BF": 0.9265170898999125 }, "V": { "rate": 5.532603915808143, "BF": 0.992547457725956 }, "W": { "rate": 5.630325092947718, "BF": 0.9913781219887787 }, "Y": { "rate": 5.505231140018241, "BF": 0.9912001562806277 } } }, "12379": { "G": "ORF1a", "S": 4039, "index": 96, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAG": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12382": { "G": "ORF1a", "S": 4040, "index": 97, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTG": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12385": { "G": "ORF1a", "S": 4041, "index": 98, "bCFEL": { "p": 0, "a": 20.37098793536531, "b": { "background": 0, "B-1-617": 0.6757806667437544, "Reference": 0 }, "pi": { "overall": 0.9330728419167265 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAT": 31, "GAC": 1 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 20.6095871795339, "b": 0.1628160803464207, "p": 0.9006384977726481 }, "bMEME": { "p": 0.6666666666666666, "a": 20.86865842045917, "b+": 31.30298763068872, "w+": 0, "b-": 0.600388814460612, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 19.42615341691929, "b+": 0, "w+": 0.05864960960966337, "b-": 0, "w-": 0.9413503903903366, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.4458852126452318, 0.7585335755706408, 0.08507875931696018, -0.267050703624337, -0.2147616367584433 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12388": { "G": "ORF1a", "S": 4042, "index": 99, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAT": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12391": { "G": "ORF1a", "S": 4043, "index": 100, "bCFEL": { "p": 0, "a": 20.36167794145505, "b": { "background": 0, "B-1-617": 0.02201254975439628, "Reference": 0 }, "pi": { "overall": 0.9770415900084612 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAT": 31, "GAC": 1 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 20.59856903939906, "b": 0.1617801981930136, "p": 0.9005335944549532 }, "bMEME": { "p": 0.6666666666666666, "a": 20.86865842045917, "b+": 31.30298763068872, "w+": 0, "b-": 0.600388814460612, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 19.42615341691929, "b+": 0, "w+": 0.05864960960966337, "b-": 0, "w-": 0.9413503903903366, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.7948874889375515, -0.5434939739527445, -0.3894707452134489, -0.09230748723528348, 0.097990386036515 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12394": { "G": "ORF1a", "S": 4044, "index": 101, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12397": { "G": "ORF1a", "S": 4045, "index": 102, "bCFEL": { "p": 0, "a": 3.171188468881345, "b": { "background": 0, "B-1-617": 0.07771324886221978, "Reference": 0 }, "pi": { "overall": 0.9768594429929136 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "CTC": 31, "CTT": 1 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 3.204827658624908, "b": 0, "p": 0.9551136871116382 }, "bMEME": { "p": 0.6666666666666666, "a": 3.203873682906836, "b+": 4.805810524360257, "w+": 0, "b-": 1.501479279648967, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 3.194640899334509, "b+": 6.534965149214474, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.02165175319452921, 0.03576648984913484, -0.1299089615204276, -0.422045393053767, 0.6945791190785982 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12400": { "G": "ORF1a", "S": 4046, "index": 103, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAC": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12403": { "G": "ORF1a", "S": 4047, "index": 104, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAC": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12406": { "G": "ORF1a", "S": 4048, "index": 105, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATT": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12409": { "G": "ORF1a", "S": 4049, "index": 106, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATC": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12412": { "G": "ORF1a", "S": 4050, "index": 107, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAC": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12415": { "G": "ORF1a", "S": 4051, "index": 108, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAT": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12418": { "G": "ORF1a", "S": 4052, "index": 109, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12421": { "G": "ORF1a", "S": 4053, "index": 110, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AGA": 32 } }, "aa": { "Reference": { "R": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297166078672388, "BF": 0.9911493959817732 }, "C": { "rate": 5.500434640562124, "BF": 0.9915858417236296 }, "D": { "rate": 5.452130525630916, "BF": 0.9915437195688132 }, "E": { "rate": 5.511033027253244, "BF": 0.9916045798023414 }, "F": { "rate": 5.562244829958904, "BF": 0.9916955472184713 }, "G": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "H": { "rate": 5.654965622739422, "BF": 0.9918779376611659 }, "I": { "rate": 5.45362222015022, "BF": 0.9924629404087447 }, "K": { "rate": 3.897336474578887, "BF": 0.9242013119069398 }, "L": { "rate": 3.916974679298278, "BF": 0.9266864051379886 }, "M": { "rate": 5.446196937555809, "BF": 0.9919206723247644 }, "N": { "rate": 5.495725596955571, "BF": 0.991431493370428 }, "P": { "rate": 5.556539202291015, "BF": 0.991992804082394 }, "Q": { "rate": 5.616169507503474, "BF": 0.9926586266384735 }, "R": { "rate": 5.888344497083165, "BF": 1.049388188575201 }, "S": { "rate": 5.228901827534437, "BF": 0.993431106499377 }, "T": { "rate": 3.776243387866319, "BF": 0.9265170898999125 }, "V": { "rate": 5.532603915808142, "BF": 0.992547457725956 }, "W": { "rate": 5.630325092947716, "BF": 0.9913781219887744 }, "Y": { "rate": 5.505231140018241, "BF": 0.9912001562806212 } } }, "12424": { "G": "ORF1a", "S": 4054, "index": 111, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAT": 32 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12427": { "G": "ORF1a", "S": 4055, "index": 112, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GGT": 32 } }, "aa": { "Reference": { "G": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.303943343626898, "BF": 0.999999999999989 }, "C": { "rate": 5.499526082467291, "BF": 1.000000000000029 }, "D": { "rate": 5.454037872746061, "BF": 0.9999999999999912 }, "E": { "rate": 5.510873188572397, "BF": 0.9999999999999868 }, "F": { "rate": 5.557069898198082, "BF": 0.9999999999999868 }, "G": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "H": { "rate": 5.638879287936077, "BF": 1.000000000000007 }, "I": { "rate": 5.440675380904157, "BF": 0.9999999999999668 }, "K": { "rate": 5.467698255279878, "BF": 0.9999999999999978 }, "L": { "rate": 5.421653451555605, "BF": 1.000000000000016 }, "M": { "rate": 5.435883635201785, "BF": 0.9999999999999957 }, "N": { "rate": 5.492757544853293, "BF": 1 }, "P": { "rate": 5.550448129428749, "BF": 1.000000000000009 }, "Q": { "rate": 5.60991724478496, "BF": 0.9999999999999777 }, "R": { "rate": 5.3972641498492, "BF": 0.9999999999999825 }, "S": { "rate": 5.219294290186886, "BF": 1.000000000000035 }, "T": { "rate": 5.272906129177081, "BF": 0.9999999999999802 }, "V": { "rate": 5.503473971047593, "BF": 1.000000000000002 }, "W": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "Y": { "rate": 5.511101582685502, "BF": 0.9999999999999912 } } }, "12430": { "G": "ORF1a", "S": 4056, "index": 113, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TGT": 32 } }, "aa": { "Reference": { "C": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.305383448429993, "BF": 0.9860378779146829 }, "C": { "rate": 6.332953460148188, "BF": 1.075896528169602 }, "D": { "rate": 5.457824153245063, "BF": 0.9861252307245387 }, "E": { "rate": 5.514496111364775, "BF": 0.9862280261437781 }, "F": { "rate": 3.116829970823137, "BF": 0.883946250416598 }, "G": { "rate": 5.630186162699664, "BF": 0.9856497578973259 }, "H": { "rate": 5.659585048845123, "BF": 0.9862512100888592 }, "I": { "rate": 5.467119925584965, "BF": 0.9873963332447332 }, "K": { "rate": 5.47182617248478, "BF": 0.9863787038600303 }, "L": { "rate": 5.429506339413134, "BF": 0.9862370553947043 }, "M": { "rate": 5.45629330333563, "BF": 0.9867833547931822 }, "N": { "rate": 5.502658511582402, "BF": 0.985958077026704 }, "P": { "rate": 5.560851193796127, "BF": 0.986630948904547 }, "Q": { "rate": 5.618480933357479, "BF": 0.9873681871620503 }, "R": { "rate": 5.438062505434743, "BF": 0.988654369034894 }, "S": { "rate": 2.217031898333851, "BF": 0.8488627195759524 }, "T": { "rate": 5.281400830855175, "BF": 0.9865486787857423 }, "V": { "rate": 5.549111242154519, "BF": 0.9873910219190583 }, "W": { "rate": 5.630186162699664, "BF": 0.9856497578973259 }, "Y": { "rate": 5.506403516081995, "BF": 0.9855857587191881 } } }, "12433": { "G": "ORF1a", "S": 4057, "index": 114, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTT": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12436": { "G": "ORF1a", "S": 4058, "index": 115, "bCFEL": { "p": 0, "a": 3.192110034483986, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9745355561336112 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "CCC": 31, "CCT": 1 } }, "aa": { "Reference": { "P": 32 } }, "bFEL": { "a": 3.204827658624908, "b": 0, "p": 0.9571545056926204 }, "bMEME": { "p": 0.6666666666666666, "a": 3.246494618001559, "b+": 4.869741927002336, "w+": 0, "b-": 2.634772693661996, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 3.152601145297006, "b+": 7.028676706892899, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.05799295277549382, 0.1785567718945754, -0.007731414747369366, -0.004193123511904951, -0.2151248944303416 ] }, "fade": { "A": { "rate": 5.296053746322004, "BF": 0.9955727079586607 }, "C": { "rate": 5.498351031454328, "BF": 0.9960164057843132 }, "D": { "rate": 5.451119511148701, "BF": 0.995990899866973 }, "E": { "rate": 5.50997251128387, "BF": 0.9960084168796826 }, "F": { "rate": 5.558767060138135, "BF": 0.9961238119307404 }, "G": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "H": { "rate": 5.64752089028078, "BF": 0.9962653990017573 }, "I": { "rate": 5.444728371289862, "BF": 0.9964627304324976 }, "K": { "rate": 5.465768805034076, "BF": 0.996014934317683 }, "L": { "rate": 5.420488467412673, "BF": 0.9959074427429486 }, "M": { "rate": 5.438699217276186, "BF": 0.9961062811647783 }, "N": { "rate": 5.49182007494402, "BF": 0.9959066687802539 }, "P": { "rate": 5.779401689247727, "BF": 1.025883534035666 }, "Q": { "rate": 5.613145293046783, "BF": 0.9966584426900124 }, "R": { "rate": 5.406869668974337, "BF": 0.9969709686994447 }, "S": { "rate": 3.623976851540414, "BF": 0.9188616283648366 }, "T": { "rate": 5.268899972816679, "BF": 0.99582057999198 }, "V": { "rate": 5.516619849813091, "BF": 0.9965375102562841 }, "W": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "Y": { "rate": 5.507121871836691, "BF": 0.9958375276237276 } } }, "12439": { "G": "ORF1a", "S": 4059, "index": 116, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTG": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12442": { "G": "ORF1a", "S": 4060, "index": 117, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAC": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12445": { "G": "ORF1a", "S": 4061, "index": 118, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATA": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12448": { "G": "ORF1a", "S": 4062, "index": 119, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATA": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12451": { "G": "ORF1a", "S": 4063, "index": 120, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CCT": 32 } }, "aa": { "Reference": { "P": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296053746322004, "BF": 0.9955727079586607 }, "C": { "rate": 5.498351031454328, "BF": 0.9960164057843132 }, "D": { "rate": 5.451119511148701, "BF": 0.995990899866973 }, "E": { "rate": 5.50997251128387, "BF": 0.9960084168796826 }, "F": { "rate": 5.558767060138135, "BF": 0.9961238119307404 }, "G": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "H": { "rate": 5.64752089028078, "BF": 0.9962653990017573 }, "I": { "rate": 5.444728371289862, "BF": 0.9964627304324976 }, "K": { "rate": 5.465768805034076, "BF": 0.996014934317683 }, "L": { "rate": 5.420488467412673, "BF": 0.9959074427429486 }, "M": { "rate": 5.438699217276186, "BF": 0.9961062811647783 }, "N": { "rate": 5.49182007494402, "BF": 0.9959066687802539 }, "P": { "rate": 5.779401689247727, "BF": 1.025883534035666 }, "Q": { "rate": 5.613145293046783, "BF": 0.9966584426900124 }, "R": { "rate": 5.406869668974337, "BF": 0.9969709686994447 }, "S": { "rate": 3.623976851540414, "BF": 0.9188616283648366 }, "T": { "rate": 5.268899972816679, "BF": 0.99582057999198 }, "V": { "rate": 5.516619849813091, "BF": 0.9965375102562841 }, "W": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "Y": { "rate": 5.507121871836691, "BF": 0.9958375276237276 } } }, "12454": { "G": "ORF1a", "S": 4064, "index": 121, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CTT": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12457": { "G": "ORF1a", "S": 4065, "index": 122, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.756232495704726, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9895702078955098 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ACA": 31, "ATA": 1 } }, "aa": { "Reference": { "T": 31, "I": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.789076154151788, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.2323068576575832, "a": 0, "b+": 16.04490125187609, "w+": 0.99, "b-": 0, "w-": 0.01, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.5720526862655848, 0.7230336131147019, 0.6255678193451613, 0.5123037767720485, 1.399743574526714 ] }, "fade": { "A": { "rate": 2.230483351178133, "BF": 0.8661900777718499 }, "C": { "rate": 5.466101967841914, "BF": 1.054456160665399 }, "D": { "rate": 5.397371802483191, "BF": 1.053650417705775 }, "E": { "rate": 5.477086826097317, "BF": 1.052777165115709 }, "F": { "rate": 5.503822844942813, "BF": 1.054814118456959 }, "G": { "rate": 5.631670817537924, "BF": 1.056687191571419 }, "H": { "rate": 5.59398126418139, "BF": 1.055908272666257 }, "I": { "rate": 12.63086214684443, "BF": 1.886517430867185 }, "K": { "rate": 5.414008557170159, "BF": 1.051552523130957 }, "L": { "rate": 5.148442936590988, "BF": 1.043249064830302 }, "M": { "rate": 4.750522805920205, "BF": 1.025744628380445 }, "N": { "rate": 5.424930448390787, "BF": 1.054305667516868 }, "P": { "rate": 5.50742627525435, "BF": 1.052571529135861 }, "Q": { "rate": 5.587722913742398, "BF": 1.051797808959863 }, "R": { "rate": 2.766796346246744, "BF": 0.9107491025218466 }, "S": { "rate": 4.515132380924854, "BF": 1.02271254455097 }, "T": { "rate": 0.5701621568194308, "BF": 0.7437486345367205 }, "V": { "rate": 5.337811398359992, "BF": 1.05109392419125 }, "W": { "rate": 5.631670817537924, "BF": 1.056687191571419 }, "Y": { "rate": 5.499494227405604, "BF": 1.055538344638023 } } }, "12460": { "G": "ORF1a", "S": 4066, "index": 123, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ACA": 32 } }, "aa": { "Reference": { "T": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752964, "BF": 0.9898497761552533 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293545 }, "G": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345211 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848133 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618458 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292119, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218435, "BF": 0.9513404991941874 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886205, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928598, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12463": { "G": "ORF1a", "S": 4067, "index": 124, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.570479655417568, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9842070861815725 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCA": 31, "TCA": 1 } }, "aa": { "Reference": { "A": 31, "S": 1 } }, "bFEL": { "a": 0, "b": 0.07142484547739002, "p": 0.9925789578064024 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.08094025545997562, "w+": 0.2290149977098501, "b-": 0, "w-": 0.7709850022901499, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2062822083399997, "b-": 0, "w-": 0.7937177916600003, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.5485463071655138, 0.1736059152840212, 0.3496925965429374, 0.4848689203421276, 12.94252706739861 ] }, "fade": { "A": { "rate": 5.610364998748901, "BF": 1.034072300241128 }, "C": { "rate": 5.497357704096382, "BF": 0.9944460808029537 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670652 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370277, "BF": 0.9944235151533204 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723301 }, "I": { "rate": 5.445463813320677, "BF": 0.9950166923528526 }, "K": { "rate": 5.465835253887165, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335723, "BF": 0.9943870241394095 }, "M": { "rate": 5.439729962976314, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723752, "BF": 0.9947444439488035 }, "Q": { "rate": 5.614250453936483, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176022 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730188 }, "T": { "rate": 4.263831753219311, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370277, "BF": 0.9944235151533204 }, "Y": { "rate": 5.506209829712968, "BF": 0.9942539853605655 } } }, "12466": { "G": "ORF1a", "S": 4068, "index": 125, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.534350394398107, "B-1-617": 0.01191926342770548, "Reference": 0 }, "pi": { "overall": 0.9963088747177953 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GCC": 31, "TCC": 1 } }, "aa": { "Reference": { "A": 31, "S": 1 } }, "bFEL": { "a": 0, "b": 1.586299161132937, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.929658045798704, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2087885010280001, "b-": 0, "w-": 0.7912114989719999, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.005484939061168711, 0.1028295149917871, 0.2639525132305186, 0.3088551097090368, 0.1694843461681877 ] }, "fade": { "A": { "rate": 5.610364998748901, "BF": 1.034072300241128 }, "C": { "rate": 5.497357704096382, "BF": 0.9944460808029537 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670652 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370277, "BF": 0.9944235151533204 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723301 }, "I": { "rate": 5.445463813320677, "BF": 0.9950166923528526 }, "K": { "rate": 5.465835253887165, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335723, "BF": 0.9943870241394095 }, "M": { "rate": 5.439729962976314, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723752, "BF": 0.9947444439488035 }, "Q": { "rate": 5.614250453936483, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176022 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730188 }, "T": { "rate": 4.263831753219311, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370277, "BF": 0.9944235151533204 }, "Y": { "rate": 5.506209829712968, "BF": 0.9942539853605655 } } }, "12469": { "G": "ORF1a", "S": 4069, "index": 126, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12472": { "G": "ORF1a", "S": 4070, "index": 127, "bCFEL": { "p": 0, "a": 5.198458685829157, "b": { "background": 0, "B-1-617": 0.6892659904974067, "Reference": 0 }, "pi": { "overall": 0.9180287250150805 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CTA": 29, "TTA": 3 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 5.156731298985191, "b": 0.1836495062523509, "p": 0.952011385899849 }, "bMEME": { "p": 0.6666666666666666, "a": 5.199393870663767, "b+": 14.71138673404418, "w+": 0, "b-": 1.499789961783057, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 5.081284493697717, "b+": 7.621926740546576, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.3407622719247865, 0.4568437778437747, -0.3469120653980059, -0.4377908796730941, 0.4385130897356323 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12475": { "G": "ORF1a", "S": 4071, "index": 128, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATG": 32 } }, "aa": { "Reference": { "M": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295694464017998, "BF": 0.9931789531276972 }, "C": { "rate": 5.49933555445904, "BF": 0.9936775133393744 }, "D": { "rate": 5.450785470203125, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038935, "BF": 0.993666169003468 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473639 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "H": { "rate": 5.651854692718327, "BF": 0.9939682921668517 }, "I": { "rate": 4.293117599260281, "BF": 0.9431000495340196 }, "K": { "rate": 5.465919722062229, "BF": 0.9936946431547333 }, "L": { "rate": 5.420955334666949, "BF": 0.9935371381867882 }, "M": { "rate": 5.801929782582542, "BF": 1.038460694372429 }, "N": { "rate": 5.493743359870732, "BF": 0.9935406054280892 }, "P": { "rate": 5.554582881326989, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586259 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.04321200455033, "BF": 0.9418781520036377 }, "T": { "rate": 5.268660696460636, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803954, "BF": 0.9387916660369791 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "Y": { "rate": 5.505736957895139, "BF": 0.9933735120480158 } } }, "12478": { "G": "ORF1a", "S": 4072, "index": 129, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTT": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12481": { "G": "ORF1a", "S": 4073, "index": 130, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTC": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12484": { "G": "ORF1a", "S": 4074, "index": 131, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATA": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12487": { "G": "ORF1a", "S": 4075, "index": 132, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 2349.955221801233, "Reference": 0 }, "pi": { "overall": 0.007496866564663529 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 0 }, "q": 0.7421897899016894 }, "cdn": { "Reference": { "CCA": 30, "TCA": 2 } }, "aa": { "Reference": { "P": 30, "S": 2 } }, "bFEL": { "a": 0, "b": 2693.39646102285, "p": 0.001276285779958086 }, "bMEME": { "p": 0.002426582108613462, "a": 0, "b+": 2726.483703129013, "w+": 0.99999999, "b-": 0, "w-": 1e-08, "br": 1 }, "lMEME": { "p": 0.2912536795461454, "a": 0, "b+": 10.65983483663423, "w+": 0.99, "b-": 0, "w-": 0.01, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.5629652821575621, 1.202368481239023, -5.291865349182212, -0.05781161548817493, 10.9797065564442 ] }, "fade": { "A": { "rate": 3.223984676193731, "BF": 0.9574299393808374 }, "C": { "rate": 4.160371522811504, "BF": 0.9983906767197491 }, "D": { "rate": 5.462969549258269, "BF": 1.055934530965903 }, "E": { "rate": 5.508480992708526, "BF": 1.054915973013925 }, "F": { "rate": 5.516434475081735, "BF": 1.054744603608415 }, "G": { "rate": 5.631114450938525, "BF": 1.056798502501282 }, "H": { "rate": 5.537705920490576, "BF": 1.053873803647798 }, "I": { "rate": 4.493433683610198, "BF": 1.014384210540415 }, "K": { "rate": 5.469498131381765, "BF": 1.054448982365992 }, "L": { "rate": 5.409915565392185, "BF": 1.055487064480197 }, "M": { "rate": 4.397136171608513, "BF": 1.012590470714411 }, "N": { "rate": 4.011171853902803, "BF": 0.9934704952234683 }, "P": { "rate": 0.5298215496295212, "BF": 0.6682937323125675 }, "Q": { "rate": 5.570875738969732, "BF": 1.04787465737356 }, "R": { "rate": 5.243272186827418, "BF": 1.042917067819126 }, "S": { "rate": 12.61554484638754, "BF": 1.757048050844856 }, "T": { "rate": 5.275056347433188, "BF": 1.055492523896694 }, "V": { "rate": 5.311630661582828, "BF": 1.0494806124964 }, "W": { "rate": 5.631114450938525, "BF": 1.056798502501282 }, "Y": { "rate": 5.546500967946822, "BF": 1.057989001283139 } } }, "12490": { "G": "ORF1a", "S": 4076, "index": 133, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.329389173655115, "B-1-617": 0.7642144194635947, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAC": 31, "TAC": 1 } }, "aa": { "Reference": { "D": 31, "Y": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 3.859443894515683, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.25, "b-": 0, "w-": 0.75, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.7341747605162299, 0.2758374750973312, 0.4500632018221016, 0.474082513850355, -0.1241173654426523 ] }, "fade": { "A": { "rate": 5.297339308476422, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713298 }, "D": { "rate": 5.912912328240323, "BF": 1.047531580305115 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112138 }, "F": { "rate": 5.562044392895258, "BF": 0.9921669869404197 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420636 }, "H": { "rate": 5.654188136176655, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879294, "BF": 0.9929079470197938 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948916, "BF": 0.9919624378984957 }, "M": { "rate": 5.445321287159222, "BF": 0.9923550022717988 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360598 }, "P": { "rate": 5.556158493230476, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040844 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286858, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870068, "BF": 0.9919532052812148 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420636 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210647 } } }, "12493": { "G": "ORF1a", "S": 4077, "index": 134, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TAT": 32 } }, "aa": { "Reference": { "Y": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.29728091323631, "BF": 0.9916852839786031 }, "C": { "rate": 5.500233947388757, "BF": 0.9921190450724822 }, "D": { "rate": 2.7705658525432, "BF": 0.867521716009261 }, "E": { "rate": 5.507771374403061, "BF": 0.9919922060106123 }, "F": { "rate": 5.561960154707541, "BF": 0.9922330191457844 }, "G": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "H": { "rate": 5.654165941607203, "BF": 0.9924071889090705 }, "I": { "rate": 5.453003319443125, "BF": 0.992968725871315 }, "K": { "rate": 5.466668549886556, "BF": 0.9921778383698461 }, "L": { "rate": 5.422623562879634, "BF": 0.992026953712027 }, "M": { "rate": 5.445289948452294, "BF": 0.9924189506591152 }, "N": { "rate": 5.495531372068572, "BF": 0.9919789288644772 }, "P": { "rate": 5.556097946486756, "BF": 0.9925025087577567 }, "Q": { "rate": 5.615833465624653, "BF": 0.9931441570055406 }, "R": { "rate": 5.419187091344193, "BF": 0.9938496583924854 }, "S": { "rate": 5.227658458645108, "BF": 0.9938528656747706 }, "T": { "rate": 5.270894584740484, "BF": 0.9920067705225797 }, "V": { "rate": 5.529004557818923, "BF": 0.9929577880117307 }, "W": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "Y": { "rate": 5.97474213822821, "BF": 1.047109046491042 } } }, "12496": { "G": "ORF1a", "S": 4078, "index": 135, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAC": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12499": { "G": "ORF1a", "S": 4079, "index": 136, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ACA": 32 } }, "aa": { "Reference": { "T": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752964, "BF": 0.9898497761552533 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293545 }, "G": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345211 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848133 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618458 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292119, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218435, "BF": 0.9513404991941874 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886205, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928598, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12502": { "G": "ORF1a", "S": 4080, "index": 137, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TAT": 32 } }, "aa": { "Reference": { "Y": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.29728091323631, "BF": 0.9916852839786031 }, "C": { "rate": 5.500233947388757, "BF": 0.9921190450724822 }, "D": { "rate": 2.7705658525432, "BF": 0.867521716009261 }, "E": { "rate": 5.507771374403061, "BF": 0.9919922060106123 }, "F": { "rate": 5.561960154707541, "BF": 0.9922330191457844 }, "G": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "H": { "rate": 5.654165941607203, "BF": 0.9924071889090705 }, "I": { "rate": 5.453003319443125, "BF": 0.992968725871315 }, "K": { "rate": 5.466668549886556, "BF": 0.9921778383698461 }, "L": { "rate": 5.422623562879634, "BF": 0.992026953712027 }, "M": { "rate": 5.445289948452294, "BF": 0.9924189506591152 }, "N": { "rate": 5.495531372068572, "BF": 0.9919789288644772 }, "P": { "rate": 5.556097946486756, "BF": 0.9925025087577567 }, "Q": { "rate": 5.615833465624653, "BF": 0.9931441570055406 }, "R": { "rate": 5.419187091344193, "BF": 0.9938496583924854 }, "S": { "rate": 5.227658458645108, "BF": 0.9938528656747706 }, "T": { "rate": 5.270894584740484, "BF": 0.9920067705225797 }, "V": { "rate": 5.529004557818923, "BF": 0.9929577880117307 }, "W": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "Y": { "rate": 5.97474213822821, "BF": 1.047109046491042 } } }, "12505": { "G": "ORF1a", "S": 4081, "index": 138, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12508": { "G": "ORF1a", "S": 4082, "index": 139, "bCFEL": { "p": 0, "a": 0, "b": { "background": 4.416024379863759, "B-1-617": 7.215119897204079, "Reference": 0.08906090118487382 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AAT": 31, "AGT": 1 } }, "aa": { "Reference": { "N": 31, "S": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.958052817869167, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 2.617215569978431, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.5749106680865744, 0.7192339333470378, -0.3947896157946159, 0.1727687900245574, 1.857922955151209 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062374 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040191, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.9943950244389297 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126911, "BF": 0.9943967165596173 }, "Q": { "rate": 5.61455033413507, "BF": 0.994964765951277 }, "R": { "rate": 5.411904226374547, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207932, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.993910144818702 }, "V": { "rate": 5.523559141470514, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.50595833629527, "BF": 0.9938279958650937 } } }, "12511": { "G": "ORF1a", "S": 4083, "index": 140, "bCFEL": { "p": 0, "a": 3.866154229633559, "b": { "background": 0, "B-1-617": 0.4098695586777816, "Reference": 0 }, "pi": { "overall": 0.9533590573719652 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ACG": 31, "ACC": 1 } }, "aa": { "Reference": { "T": 32 } }, "bFEL": { "a": 3.923451006078712, "b": 0.1318813648872235, "p": 0.9626729966348267 }, "bMEME": { "p": 0.6666666666666666, "a": 3.862010608338021, "b+": 5.793015912507029, "w+": 0, "b-": 2.491129766976171, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 3.854811223424896, "b+": 5.78221683513734, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.199572708988974, 0.1244023255435259, 0.809449893125575, 0.3022347051020699, 0.09118744848040194 ] }, "fade": { "A": { "rate": 3.823727052389935, "BF": 0.9270224239598963 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752964, "BF": 0.9898497761552533 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293545 }, "G": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345211 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980424 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848133 }, "M": { "rate": 5.447392430405777, "BF": 0.9902400822618458 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.557980986292119, "BF": 0.9903298333790634 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218435, "BF": 0.9513404991941874 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886205, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928598, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202467, "BF": 0.9895889834559559 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518947 } } }, "12514": { "G": "ORF1a", "S": 4084, "index": 141, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TGT": 32 } }, "aa": { "Reference": { "C": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.305383448429993, "BF": 0.9860378779146829 }, "C": { "rate": 6.332953460148188, "BF": 1.075896528169602 }, "D": { "rate": 5.457824153245063, "BF": 0.9861252307245387 }, "E": { "rate": 5.514496111364775, "BF": 0.9862280261437781 }, "F": { "rate": 3.116829970823137, "BF": 0.883946250416598 }, "G": { "rate": 5.630186162699664, "BF": 0.9856497578973259 }, "H": { "rate": 5.659585048845123, "BF": 0.9862512100888592 }, "I": { "rate": 5.467119925584965, "BF": 0.9873963332447332 }, "K": { "rate": 5.47182617248478, "BF": 0.9863787038600303 }, "L": { "rate": 5.429506339413134, "BF": 0.9862370553947043 }, "M": { "rate": 5.45629330333563, "BF": 0.9867833547931822 }, "N": { "rate": 5.502658511582402, "BF": 0.985958077026704 }, "P": { "rate": 5.560851193796127, "BF": 0.986630948904547 }, "Q": { "rate": 5.618480933357479, "BF": 0.9873681871620503 }, "R": { "rate": 5.438062505434743, "BF": 0.988654369034894 }, "S": { "rate": 2.217031898333851, "BF": 0.8488627195759524 }, "T": { "rate": 5.281400830855175, "BF": 0.9865486787857423 }, "V": { "rate": 5.549111242154519, "BF": 0.9873910219190583 }, "W": { "rate": 5.630186162699664, "BF": 0.9856497578973259 }, "Y": { "rate": 5.506403516081995, "BF": 0.9855857587191881 } } }, "12517": { "G": "ORF1a", "S": 4085, "index": 142, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAT": 32 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12520": { "G": "ORF1a", "S": 4086, "index": 143, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GGT": 32 } }, "aa": { "Reference": { "G": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.303943343626898, "BF": 0.999999999999989 }, "C": { "rate": 5.499526082467291, "BF": 1.000000000000029 }, "D": { "rate": 5.454037872746061, "BF": 0.9999999999999912 }, "E": { "rate": 5.510873188572397, "BF": 0.9999999999999868 }, "F": { "rate": 5.557069898198082, "BF": 0.9999999999999868 }, "G": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "H": { "rate": 5.638879287936077, "BF": 1.000000000000007 }, "I": { "rate": 5.440675380904157, "BF": 0.9999999999999668 }, "K": { "rate": 5.467698255279878, "BF": 0.9999999999999978 }, "L": { "rate": 5.421653451555605, "BF": 1.000000000000016 }, "M": { "rate": 5.435883635201785, "BF": 0.9999999999999957 }, "N": { "rate": 5.492757544853293, "BF": 1 }, "P": { "rate": 5.550448129428749, "BF": 1.000000000000009 }, "Q": { "rate": 5.60991724478496, "BF": 0.9999999999999777 }, "R": { "rate": 5.3972641498492, "BF": 0.9999999999999825 }, "S": { "rate": 5.219294290186886, "BF": 1.000000000000035 }, "T": { "rate": 5.272906129177081, "BF": 0.9999999999999802 }, "V": { "rate": 5.503473971047593, "BF": 1.000000000000002 }, "W": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "Y": { "rate": 5.511101582685502, "BF": 0.9999999999999912 } } }, "12523": { "G": "ORF1a", "S": 4087, "index": 144, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.738606829771655, "B-1-617": 0.1834038883182344, "Reference": 0 }, "pi": { "overall": 0.9899383765810306 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ACA": 31, "ATA": 1 } }, "aa": { "Reference": { "T": 31, "I": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.437221691867563, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.25, "b-": 0, "w-": 0.75, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 1.467912966335734, 1.048361211127534, -0.5416160389560009, 0.1135946638146065, -0.1325696557631366 ] }, "fade": { "A": { "rate": 3.823727052389937, "BF": 0.9270224239599039 }, "C": { "rate": 5.501432645967297, "BF": 0.9898648628886852 }, "D": { "rate": 5.453737698752963, "BF": 0.989849776155249 }, "E": { "rate": 5.512031373721819, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683146, "BF": 0.9899837083293522 }, "G": { "rate": 5.630286273202469, "BF": 0.9895889834559624 }, "H": { "rate": 5.656759099241796, "BF": 0.9901317519345276 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980406 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848176 }, "M": { "rate": 5.447392430405776, "BF": 0.9902400822618412 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.55798098629212, "BF": 0.99032983337907 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566753 }, "R": { "rate": 4.442409964218434, "BF": 0.9513404991941813 }, "S": { "rate": 5.231889572895304, "BF": 0.9919366129405753 }, "T": { "rate": 5.852992916886206, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928597, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202469, "BF": 0.9895889834559624 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518969 } } }, "12526": { "G": "ORF1a", "S": 4088, "index": 145, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.747072669534603, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.980095324166522 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ACA": 31, "ATA": 1 } }, "aa": { "Reference": { "T": 31, "I": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.789076154151788, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.2323068674223148, "a": 0, "b+": 16.04490125187609, "w+": 0.99, "b-": 0, "w-": 0.01, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.5469336186589974, 0.1679731510120776, 0.6101716407459336, 0.6366720169799334, 0.3026022637982405 ] }, "fade": { "A": { "rate": 2.230483550183798, "BF": 0.8661901000681873 }, "C": { "rate": 5.466101965474561, "BF": 1.054456160574006 }, "D": { "rate": 5.39737179853321, "BF": 1.053650417570138 }, "E": { "rate": 5.477086824195888, "BF": 1.052777164993517 }, "F": { "rate": 5.503822843871959, "BF": 1.054814118444898 }, "G": { "rate": 5.63167081757162, "BF": 1.056687191564672 }, "H": { "rate": 5.593981267666278, "BF": 1.055908272791453 }, "I": { "rate": 12.63086366092266, "BF": 1.886517697275221 }, "K": { "rate": 5.414008558984439, "BF": 1.05155252322023 }, "L": { "rate": 5.148442396905879, "BF": 1.043249042964098 }, "M": { "rate": 4.750521487948225, "BF": 1.025744569986937 }, "N": { "rate": 5.424930444971242, "BF": 1.054305667340246 }, "P": { "rate": 5.50742627448514, "BF": 1.052571529135033 }, "Q": { "rate": 5.587722914791037, "BF": 1.051797809204731 }, "R": { "rate": 2.766796554870064, "BF": 0.9107491206376367 }, "S": { "rate": 4.515131171892213, "BF": 1.022712491756673 }, "T": { "rate": 0.5701620792607999, "BF": 0.7437485346020275 }, "V": { "rate": 5.337811401303738, "BF": 1.051093924342475 }, "W": { "rate": 5.63167081757162, "BF": 1.056687191564672 }, "Y": { "rate": 5.499494224525348, "BF": 1.055538344488876 } } }, "12529": { "G": "ORF1a", "S": 4089, "index": 146, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTT": 32 } }, "aa": { "Reference": { "F": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.298403086637607, "BF": 0.9904628995183727 }, "C": { "rate": 3.966225283337353, "BF": 0.9258295047171716 }, "D": { "rate": 5.452775194992197, "BF": 0.9908076808181171 }, "E": { "rate": 5.511440690145103, "BF": 0.9908760240174069 }, "F": { "rate": 6.101854164249689, "BF": 1.053098124637936 }, "G": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "H": { "rate": 5.655818040146093, "BF": 0.9911228100914123 }, "I": { "rate": 5.455828813005708, "BF": 0.9918058189957282 }, "K": { "rate": 5.467476567309471, "BF": 0.9909464765986756 }, "L": { "rate": 2.901454954464303, "BF": 0.8773184143424232 }, "M": { "rate": 5.447593002246177, "BF": 0.9912273054434662 }, "N": { "rate": 5.496896826023274, "BF": 0.9906991659182434 }, "P": { "rate": 5.557168917044696, "BF": 0.9912727397187614 }, "Q": { "rate": 5.616557924882006, "BF": 0.991957123409493 }, "R": { "rate": 5.422954563085814, "BF": 0.9927767959481993 }, "S": { "rate": 5.229281356223368, "BF": 0.9927259482619157 }, "T": { "rate": 5.272591722409643, "BF": 0.9908241923079032 }, "V": { "rate": 5.534823957246684, "BF": 0.9918495194942628 }, "W": { "rate": 5.63030911314705, "BF": 0.9906018142350335 }, "Y": { "rate": 5.505254340720596, "BF": 0.9904340909408749 } } }, "12532": { "G": "ORF1a", "S": 4090, "index": 147, "bCFEL": { "p": 0, "a": 0, "b": { "background": 3.700633988003308, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ACT": 31, "ATT": 1 } }, "aa": { "Reference": { "T": 31, "I": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.9806683950122447, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.25, "b-": 0, "w-": 0.75, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 1.214628584235453, 0.402932476852712, -0.5860606765531364, -0.2741674810072515, 0.3464840553661773 ] }, "fade": { "A": { "rate": 3.823727052389937, "BF": 0.9270224239599039 }, "C": { "rate": 5.501432645967297, "BF": 0.9898648628886852 }, "D": { "rate": 5.453737698752963, "BF": 0.989849776155249 }, "E": { "rate": 5.512031373721819, "BF": 0.9899268663129629 }, "F": { "rate": 5.564173837683146, "BF": 0.9899837083293522 }, "G": { "rate": 5.630286273202469, "BF": 0.9895889834559624 }, "H": { "rate": 5.656759099241796, "BF": 0.9901317519345276 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980406 }, "K": { "rate": 5.468073612212064, "BF": 0.990003938208891 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848176 }, "M": { "rate": 5.447392430405776, "BF": 0.9902400822618412 }, "N": { "rate": 5.498104366482543, "BF": 0.9897303769979225 }, "P": { "rate": 5.55798098629212, "BF": 0.99032983337907 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566753 }, "R": { "rate": 4.442409964218434, "BF": 0.9513404991941813 }, "S": { "rate": 5.231889572895304, "BF": 0.9919366129405753 }, "T": { "rate": 5.852992916886206, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928597, "BF": 0.9909594805561863 }, "W": { "rate": 5.630286273202469, "BF": 0.9895889834559624 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518969 } } }, "12535": { "G": "ORF1a", "S": 4091, "index": 148, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TAT": 32 } }, "aa": { "Reference": { "Y": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.29728091323631, "BF": 0.9916852839786031 }, "C": { "rate": 5.500233947388757, "BF": 0.9921190450724822 }, "D": { "rate": 2.7705658525432, "BF": 0.867521716009261 }, "E": { "rate": 5.507771374403061, "BF": 0.9919922060106123 }, "F": { "rate": 5.561960154707541, "BF": 0.9922330191457844 }, "G": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "H": { "rate": 5.654165941607203, "BF": 0.9924071889090705 }, "I": { "rate": 5.453003319443125, "BF": 0.992968725871315 }, "K": { "rate": 5.466668549886556, "BF": 0.9921778383698461 }, "L": { "rate": 5.422623562879634, "BF": 0.992026953712027 }, "M": { "rate": 5.445289948452294, "BF": 0.9924189506591152 }, "N": { "rate": 5.495531372068572, "BF": 0.9919789288644772 }, "P": { "rate": 5.556097946486756, "BF": 0.9925025087577567 }, "Q": { "rate": 5.615833465624653, "BF": 0.9931441570055406 }, "R": { "rate": 5.419187091344193, "BF": 0.9938496583924854 }, "S": { "rate": 5.227658458645108, "BF": 0.9938528656747706 }, "T": { "rate": 5.270894584740484, "BF": 0.9920067705225797 }, "V": { "rate": 5.529004557818923, "BF": 0.9929577880117307 }, "W": { "rate": 5.630334422100916, "BF": 0.991929659958223 }, "Y": { "rate": 5.97474213822821, "BF": 1.047109046491042 } } }, "12538": { "G": "ORF1a", "S": 4092, "index": 149, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12541": { "G": "ORF1a", "S": 4093, "index": 150, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCA": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12544": { "G": "ORF1a", "S": 4094, "index": 151, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12547": { "G": "ORF1a", "S": 4095, "index": 152, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTG": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12550": { "G": "ORF1a", "S": 4096, "index": 153, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TGG": 32 } }, "aa": { "Reference": { "W": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.303943343626898, "BF": 0.999999999999989 }, "C": { "rate": 5.499526082467291, "BF": 1.000000000000029 }, "D": { "rate": 5.454037872746061, "BF": 0.9999999999999912 }, "E": { "rate": 5.510873188572397, "BF": 0.9999999999999868 }, "F": { "rate": 5.557069898198082, "BF": 0.9999999999999868 }, "G": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "H": { "rate": 5.638879287936077, "BF": 1.000000000000007 }, "I": { "rate": 5.440675380904157, "BF": 0.9999999999999668 }, "K": { "rate": 5.467698255279878, "BF": 0.9999999999999978 }, "L": { "rate": 5.421653451555605, "BF": 1.000000000000016 }, "M": { "rate": 5.435883635201785, "BF": 0.9999999999999957 }, "N": { "rate": 5.492757544853293, "BF": 1 }, "P": { "rate": 5.550448129428749, "BF": 1.000000000000009 }, "Q": { "rate": 5.60991724478496, "BF": 0.9999999999999777 }, "R": { "rate": 5.3972641498492, "BF": 0.9999999999999825 }, "S": { "rate": 5.219294290186886, "BF": 1.000000000000035 }, "T": { "rate": 5.272906129177081, "BF": 0.9999999999999802 }, "V": { "rate": 5.503473971047593, "BF": 1.000000000000002 }, "W": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "Y": { "rate": 5.511101582685502, "BF": 0.9999999999999912 } } }, "12553": { "G": "ORF1a", "S": 4097, "index": 154, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAA": 32 } }, "aa": { "Reference": { "E": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296766801760399, "BF": 0.9943458070207923 }, "C": { "rate": 5.499399324697862, "BF": 0.9948017262854116 }, "D": { "rate": 3.397446518904041, "BF": 0.8975257520564035 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963918, "BF": 0.9948901161096751 }, "G": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.995371068471626 }, "K": { "rate": 5.46578424575683, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086741 }, "M": { "rate": 5.441011577510821, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691489, "BF": 0.9950628048573733 }, "Q": { "rate": 5.614065259642484, "BF": 0.9955611406036415 }, "R": { "rate": 5.410594321510914, "BF": 0.995993439565471 }, "S": { "rate": 5.222126863350896, "BF": 0.9959650646773767 }, "T": { "rate": 5.268972983906978, "BF": 0.9945754984155376 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "Y": { "rate": 5.502868312066332, "BF": 0.9943716012482708 } } }, "12556": { "G": "ORF1a", "S": 4098, "index": 155, "bCFEL": { "p": 0, "a": 4.096210800342686, "b": { "background": 0, "B-1-617": 0.6141017336968563, "Reference": 0 }, "pi": { "overall": 0.9537842489101511 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ATC": 31, "ATT": 1 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 4.106973432893721, "b": 0.0837579222787789, "p": 0.9544821830094157 }, "bMEME": { "p": 0.6666666666666666, "a": 4.06016401094355, "b+": 9.984323985462302, "w+": 0, "b-": 0.7757847450990135, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 4.037856866548067, "b+": 9.904223507511027, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.1563465020213214, 0.6915518508377344, -0.04593557256507134, -0.1173882156008064, -0.1227425497076833 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12559": { "G": "ORF1a", "S": 4099, "index": 156, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAA": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12562": { "G": "ORF1a", "S": 4100, "index": 157, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAG": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12565": { "G": "ORF1a", "S": 4101, "index": 158, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTT": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12568": { "G": "ORF1a", "S": 4102, "index": 159, "bCFEL": { "p": 0, "a": 14.14005853525352, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9730315243980995 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GTA": 31, "GTG": 1 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 14.11075145421835, "b": 0.1296943777220876, "p": 0.9078841322957031 }, "bMEME": { "p": 0.6666666666666666, "a": 14.32982957244073, "b+": 21.49474435866112, "w+": 0, "b-": 1.242379135936381, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 13.77929191057957, "b+": 1.340408267798992, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.2456989986751775, -0.03353577849673799, 0.4572122013800251, 0.1408979936005787, 0.003684470590371985 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12571": { "G": "ORF1a", "S": 4103, "index": 160, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.963989796064166, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAT": 31, "TAT": 1 } }, "aa": { "Reference": { "D": 31, "Y": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.1355031069705359, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2062822083399997, "b-": 0, "w-": 0.7937177916600003, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.1080208297227145, -0.05966663280547952, 3.354290516476016, -0.3699225637235463, 0.1301105054525743 ] }, "fade": { "A": { "rate": 5.297339308476422, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713298 }, "D": { "rate": 5.912912328240323, "BF": 1.047531580305115 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112138 }, "F": { "rate": 5.562044392895258, "BF": 0.9921669869404197 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420636 }, "H": { "rate": 5.654188136176655, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879294, "BF": 0.9929079470197938 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948916, "BF": 0.9919624378984957 }, "M": { "rate": 5.445321287159222, "BF": 0.9923550022717988 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360598 }, "P": { "rate": 5.556158493230476, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040844 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286858, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870068, "BF": 0.9919532052812148 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420636 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210647 } } }, "12574": { "G": "ORF1a", "S": 4104, "index": 161, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12577": { "G": "ORF1a", "S": 4105, "index": 162, "bCFEL": { "p": 0, "a": 20.2323553240181, "b": { "background": 2.973654321970214, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.8600279492836433 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "GAT": 30, "TAT": 1, "GAC": 1 } }, "aa": { "Reference": { "D": 31, "Y": 1 } }, "bFEL": { "a": 20.45496608009987, "b": 1.02902873293605, "p": 0.9027419431126966 }, "bMEME": { "p": 0.6666666666666666, "a": 20.26324400145215, "b+": 0.9382618221089256, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 19.81545715021282, "b+": 0.9369546294209746, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.257396164503197, -0.646514799045325, -0.6390438825746161, 0.08429415135394877, -0.3944275495847627 ] }, "fade": { "A": { "rate": 5.297339308476422, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713298 }, "D": { "rate": 5.912912328240323, "BF": 1.047531580305115 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112138 }, "F": { "rate": 5.562044392895258, "BF": 0.9921669869404197 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420636 }, "H": { "rate": 5.654188136176655, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879294, "BF": 0.9929079470197938 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948916, "BF": 0.9919624378984957 }, "M": { "rate": 5.445321287159222, "BF": 0.9923550022717988 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360598 }, "P": { "rate": 5.556158493230476, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040844 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286858, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870068, "BF": 0.9919532052812148 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420636 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210647 } } }, "12580": { "G": "ORF1a", "S": 4106, "index": 163, "bCFEL": { "p": 0, "a": 0, "b": { "background": 2.22263423878483, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9934951200984368 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AGT": 31, "ATT": 1 } }, "aa": { "Reference": { "S": 31, "I": 1 } }, "bFEL": { "a": 0, "b": 1.399588068053353, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 1.603811733757937, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.2, "b-": 0, "w-": 0.8, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 1.543284254272088, -0.2215986708775382, 0.2101565622838899, 0.07009767212145024, 0.03340199705111992 ] }, "fade": { "A": { "rate": 3.322389843556961, "BF": 0.9037272813595977 }, "C": { "rate": 4.366082190335632, "BF": 0.9431262104330658 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162195 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674315, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170458, "BF": 0.989909792756326 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166285 }, "K": { "rate": 5.468215577575892, "BF": 0.989791331762839 }, "L": { "rate": 5.425274649301688, "BF": 0.9896511415618324 }, "M": { "rate": 4.650117668837577, "BF": 0.9577018639659322 }, "N": { "rate": 4.238524803701699, "BF": 0.937547627126646 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153664, "BF": 0.990825485532787 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453119, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353916999, "BF": 0.9897230252675505 }, "V": { "rate": 5.53888062385204, "BF": 0.9907512023970336 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544824, "BF": 0.9892111452795548 } } }, "12583": { "G": "ORF1a", "S": 4107, "index": 164, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12586": { "G": "ORF1a", "S": 4108, "index": 165, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATT": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12589": { "G": "ORF1a", "S": 4109, "index": 166, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTT": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12592": { "G": "ORF1a", "S": 4110, "index": 167, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CAA": 32 } }, "aa": { "Reference": { "Q": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.30388234857391, "BF": 0.9992343211968069 }, "C": { "rate": 5.499725163917462, "BF": 0.9992432336753683 }, "D": { "rate": 5.454154322314668, "BF": 0.9992438518154421 }, "E": { "rate": 5.511025650186756, "BF": 0.9992508002435775 }, "F": { "rate": 5.557632175988878, "BF": 0.9992495231275605 }, "G": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "H": { "rate": 4.42630407730691, "BF": 0.9420948928321474 }, "I": { "rate": 5.44206564236492, "BF": 0.999317920652782 }, "K": { "rate": 5.467851507491939, "BF": 0.9992583916540045 }, "L": { "rate": 5.422023468184566, "BF": 0.9992498234603361 }, "M": { "rate": 5.436954513519829, "BF": 0.999281060906643 }, "N": { "rate": 5.493247503029391, "BF": 0.9992349349210349 }, "P": { "rate": 5.551013914888167, "BF": 0.9992763753310646 }, "Q": { "rate": 5.649218398317013, "BF": 1.006490366504605 }, "R": { "rate": 5.399466316741752, "BF": 0.9993915806980063 }, "S": { "rate": 5.220584763880211, "BF": 0.9993977218199422 }, "T": { "rate": 5.273227803145428, "BF": 0.9992617906228524 }, "V": { "rate": 5.506003936427005, "BF": 0.9993182120878635 }, "W": { "rate": 5.63042347942878, "BF": 0.9992210612714971 }, "Y": { "rate": 5.510780183664957, "BF": 0.9992143407892015 } } }, "12595": { "G": "ORF1a", "S": 4111, "index": 168, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CTT": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12598": { "G": "ORF1a", "S": 4112, "index": 169, "bCFEL": { "p": 0, "a": 0, "b": { "background": 4.625496763788704, "B-1-617": 0.9193082115881646, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AGT": 30, "AAT": 1, "TGT": 1 } }, "aa": { "Reference": { "S": 30, "N": 1, "C": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0.008996126907272754, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.206324331421, "b-": 0, "w-": 0.793675668579, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.5126526720917212, 0.6116236716776852, -0.3909299113702913, 0.4498998160193369, 0.7265221606822454 ] }, "fade": { "A": { "rate": 3.322389843556959, "BF": 0.9037272813595921 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245234, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980453, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170457, "BF": 0.9899097927563282 }, "I": { "rate": 4.759868340650386, "BF": 0.9624258504166264 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.9896511415618282 }, "M": { "rate": 4.650117668837574, "BF": 0.957701863965928 }, "N": { "rate": 4.238524803701698, "BF": 0.937547627126646 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.990825485532787 }, "R": { "rate": 5.427343151346692, "BF": 0.9917853726360937 }, "S": { "rate": 5.802174530453118, "BF": 1.058385092902142 }, "T": { "rate": 5.274141353917, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852041, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980453, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544824, "BF": 0.9892111452795506 } } }, "12601": { "G": "ORF1a", "S": 4113, "index": 170, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAA": 32 } }, "aa": { "Reference": { "E": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296766801760399, "BF": 0.9943458070207923 }, "C": { "rate": 5.499399324697862, "BF": 0.9948017262854116 }, "D": { "rate": 3.397446518904041, "BF": 0.8975257520564035 }, "E": { "rate": 5.812178577246621, "BF": 1.033130942116278 }, "F": { "rate": 5.559660438963918, "BF": 0.9948901161096751 }, "G": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "H": { "rate": 5.649863469598762, "BF": 0.9950525238416654 }, "I": { "rate": 5.447473534021595, "BF": 0.995371068471626 }, "K": { "rate": 5.46578424575683, "BF": 0.9947838124090193 }, "L": { "rate": 5.420859739072831, "BF": 0.9946562546086741 }, "M": { "rate": 5.441011577510821, "BF": 0.994940057662527 }, "N": { "rate": 5.49338739198942, "BF": 0.994678563794487 }, "P": { "rate": 5.553939810691489, "BF": 0.9950628048573733 }, "Q": { "rate": 5.614065259642484, "BF": 0.9955611406036415 }, "R": { "rate": 5.410594321510914, "BF": 0.995993439565471 }, "S": { "rate": 5.222126863350896, "BF": 0.9959650646773767 }, "T": { "rate": 5.268972983906978, "BF": 0.9945754984155376 }, "V": { "rate": 5.519236157297679, "BF": 0.9953537294150759 }, "W": { "rate": 5.630378309809328, "BF": 0.9946985599843468 }, "Y": { "rate": 5.502868312066332, "BF": 0.9943716012482708 } } }, "12604": { "G": "ORF1a", "S": 4114, "index": 171, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATT": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12607": { "G": "ORF1a", "S": 4115, "index": 172, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AGT": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12610": { "G": "ORF1a", "S": 4116, "index": 173, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATG": 32 } }, "aa": { "Reference": { "M": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295694464017998, "BF": 0.9931789531276972 }, "C": { "rate": 5.49933555445904, "BF": 0.9936775133393744 }, "D": { "rate": 5.450785470203125, "BF": 0.9936159208586679 }, "E": { "rate": 5.510250585038935, "BF": 0.993666169003468 }, "F": { "rate": 5.560513108304183, "BF": 0.9937919507473639 }, "G": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "H": { "rate": 5.651854692718327, "BF": 0.9939682921668517 }, "I": { "rate": 4.293117599260281, "BF": 0.9431000495340196 }, "K": { "rate": 5.465919722062229, "BF": 0.9936946431547333 }, "L": { "rate": 5.420955334666949, "BF": 0.9935371381867882 }, "M": { "rate": 5.801929782582542, "BF": 1.038460694372429 }, "N": { "rate": 5.493743359870732, "BF": 0.9935406054280892 }, "P": { "rate": 5.554582881326989, "BF": 0.9939958753166768 }, "Q": { "rate": 5.614858263189126, "BF": 0.9945769974586259 }, "R": { "rate": 5.414011897085821, "BF": 0.9951187958618801 }, "S": { "rate": 4.04321200455033, "BF": 0.9418781520036377 }, "T": { "rate": 5.268660696460636, "BF": 0.9934495056961182 }, "V": { "rate": 4.268570551803954, "BF": 0.9387916660369791 }, "W": { "rate": 5.630362283898835, "BF": 0.9935546718121512 }, "Y": { "rate": 5.505736957895139, "BF": 0.9933735120480158 } } }, "12613": { "G": "ORF1a", "S": 4117, "index": 174, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GAC": 32 } }, "aa": { "Reference": { "D": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297339308476421, "BF": 0.9916249783486369 }, "C": { "rate": 5.500296562275481, "BF": 0.9920537711713319 }, "D": { "rate": 5.912912328240325, "BF": 1.04753158030512 }, "E": { "rate": 3.879474148163319, "BF": 0.9212381411112176 }, "F": { "rate": 5.56204439289526, "BF": 0.9921669869404242 }, "G": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "H": { "rate": 5.654188136176654, "BF": 0.9923383208406131 }, "I": { "rate": 5.453202004879296, "BF": 0.9929079470198002 }, "K": { "rate": 5.466768659964324, "BF": 0.9921170469760264 }, "L": { "rate": 5.422627502948917, "BF": 0.9919624378984979 }, "M": { "rate": 5.44532128715922, "BF": 0.9923550022717965 }, "N": { "rate": 5.495653271103143, "BF": 0.9919149718360533 }, "P": { "rate": 5.556158493230477, "BF": 0.9924387213592918 }, "Q": { "rate": 5.615851773475303, "BF": 0.9930786587040823 }, "R": { "rate": 5.419424707401451, "BF": 0.9937913725808695 }, "S": { "rate": 5.227943262286857, "BF": 0.9937973547490117 }, "T": { "rate": 5.271100301870069, "BF": 0.9919532052812168 }, "V": { "rate": 4.565418196487552, "BF": 0.9520209224363771 }, "W": { "rate": 5.630332486359201, "BF": 0.9918610096420679 }, "Y": { "rate": 3.652434354134084, "BF": 0.9103757075210682 } } }, "12616": { "G": "ORF1a", "S": 4118, "index": 175, "bCFEL": { "p": 0, "a": 20.20013218757843, "b": { "background": 0, "B-1-617": 0.08065987678753951, "Reference": 0 }, "pi": { "overall": 0.9689465191088908 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AAT": 31, "AAC": 1 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 20.55602387476776, "b": 0.228153246935258, "p": 0.9201985251667341 }, "bMEME": { "p": 0.6666666666666666, "a": 21.00519221068461, "b+": 0.940312384060174, "w+": 0, "b-": 1.915676726331522, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 20.15885017272763, "b+": 30.23827525909148, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.03904887988100746, 0.08053731644779075, -0.6491116795318861, -0.8941363847829037, 0.8684223541229297 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12619": { "G": "ORF1a", "S": 4119, "index": 176, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCA": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12622": { "G": "ORF1a", "S": 4120, "index": 177, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CCT": 32 } }, "aa": { "Reference": { "P": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296053746322004, "BF": 0.9955727079586607 }, "C": { "rate": 5.498351031454328, "BF": 0.9960164057843132 }, "D": { "rate": 5.451119511148701, "BF": 0.995990899866973 }, "E": { "rate": 5.50997251128387, "BF": 0.9960084168796826 }, "F": { "rate": 5.558767060138135, "BF": 0.9961238119307404 }, "G": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "H": { "rate": 5.64752089028078, "BF": 0.9962653990017573 }, "I": { "rate": 5.444728371289862, "BF": 0.9964627304324976 }, "K": { "rate": 5.465768805034076, "BF": 0.996014934317683 }, "L": { "rate": 5.420488467412673, "BF": 0.9959074427429486 }, "M": { "rate": 5.438699217276186, "BF": 0.9961062811647783 }, "N": { "rate": 5.49182007494402, "BF": 0.9959066687802539 }, "P": { "rate": 5.779401689247727, "BF": 1.025883534035666 }, "Q": { "rate": 5.613145293046783, "BF": 0.9966584426900124 }, "R": { "rate": 5.406869668974337, "BF": 0.9969709686994447 }, "S": { "rate": 3.623976851540414, "BF": 0.9188616283648366 }, "T": { "rate": 5.268899972816679, "BF": 0.99582057999198 }, "V": { "rate": 5.516619849813091, "BF": 0.9965375102562841 }, "W": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "Y": { "rate": 5.507121871836691, "BF": 0.9958375276237276 } } }, "12625": { "G": "ORF1a", "S": 4121, "index": 178, "bCFEL": { "p": 0, "a": 20.14713181573507, "b": { "background": 0, "B-1-617": 1.054064405079435, "Reference": 0 }, "pi": { "overall": 0.927134103324357 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AAT": 31, "AAC": 1 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 20.55602387476776, "b": 0.228153246935258, "p": 0.920198542919369 }, "bMEME": { "p": 0.6666666666666666, "a": 21.00519221068461, "b+": 0.940312384060174, "w+": 0, "b-": 1.915676726331522, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 20.15885017272763, "b+": 30.23827525909148, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.07057282939330427, -1.106882638559168, 0.5461137346786853, -0.0388985643327846, 0.1622348741957941 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12628": { "G": "ORF1a", "S": 4122, "index": 179, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTA": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12631": { "G": "ORF1a", "S": 4123, "index": 180, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCA": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12634": { "G": "ORF1a", "S": 4124, "index": 181, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TGG": 32 } }, "aa": { "Reference": { "W": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.303943343626898, "BF": 0.999999999999989 }, "C": { "rate": 5.499526082467291, "BF": 1.000000000000029 }, "D": { "rate": 5.454037872746061, "BF": 0.9999999999999912 }, "E": { "rate": 5.510873188572397, "BF": 0.9999999999999868 }, "F": { "rate": 5.557069898198082, "BF": 0.9999999999999868 }, "G": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "H": { "rate": 5.638879287936077, "BF": 1.000000000000007 }, "I": { "rate": 5.440675380904157, "BF": 0.9999999999999668 }, "K": { "rate": 5.467698255279878, "BF": 0.9999999999999978 }, "L": { "rate": 5.421653451555605, "BF": 1.000000000000016 }, "M": { "rate": 5.435883635201785, "BF": 0.9999999999999957 }, "N": { "rate": 5.492757544853293, "BF": 1 }, "P": { "rate": 5.550448129428749, "BF": 1.000000000000009 }, "Q": { "rate": 5.60991724478496, "BF": 0.9999999999999777 }, "R": { "rate": 5.3972641498492, "BF": 0.9999999999999825 }, "S": { "rate": 5.219294290186886, "BF": 1.000000000000035 }, "T": { "rate": 5.272906129177081, "BF": 0.9999999999999802 }, "V": { "rate": 5.503473971047593, "BF": 1.000000000000002 }, "W": { "rate": 5.63043583739417, "BF": 1.00000000000008 }, "Y": { "rate": 5.511101582685502, "BF": 0.9999999999999912 } } }, "12637": { "G": "ORF1a", "S": 4125, "index": 182, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CCT": 32 } }, "aa": { "Reference": { "P": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296053746322004, "BF": 0.9955727079586607 }, "C": { "rate": 5.498351031454328, "BF": 0.9960164057843132 }, "D": { "rate": 5.451119511148701, "BF": 0.995990899866973 }, "E": { "rate": 5.50997251128387, "BF": 0.9960084168796826 }, "F": { "rate": 5.558767060138135, "BF": 0.9961238119307404 }, "G": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "H": { "rate": 5.64752089028078, "BF": 0.9962653990017573 }, "I": { "rate": 5.444728371289862, "BF": 0.9964627304324976 }, "K": { "rate": 5.465768805034076, "BF": 0.996014934317683 }, "L": { "rate": 5.420488467412673, "BF": 0.9959074427429486 }, "M": { "rate": 5.438699217276186, "BF": 0.9961062811647783 }, "N": { "rate": 5.49182007494402, "BF": 0.9959066687802539 }, "P": { "rate": 5.779401689247727, "BF": 1.025883534035666 }, "Q": { "rate": 5.613145293046783, "BF": 0.9966584426900124 }, "R": { "rate": 5.406869668974337, "BF": 0.9969709686994447 }, "S": { "rate": 3.623976851540414, "BF": 0.9188616283648366 }, "T": { "rate": 5.268899972816679, "BF": 0.99582057999198 }, "V": { "rate": 5.516619849813091, "BF": 0.9965375102562841 }, "W": { "rate": 5.630395230675977, "BF": 0.9959828708742796 }, "Y": { "rate": 5.507121871836691, "BF": 0.9958375276237276 } } }, "12640": { "G": "ORF1a", "S": 4126, "index": 183, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "CTT": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12643": { "G": "ORF1a", "S": 4127, "index": 184, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "ATT": 32 } }, "aa": { "Reference": { "I": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297486980684134, "BF": 0.9890764026148687 }, "C": { "rate": 5.501609972003477, "BF": 0.9894768749672077 }, "D": { "rate": 5.454093763983005, "BF": 0.9894695978239394 }, "E": { "rate": 5.512253310706406, "BF": 0.989550121179582 }, "F": { "rate": 5.564552413751974, "BF": 0.9895975721729365 }, "G": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "H": { "rate": 5.657157503697782, "BF": 0.9897400635306876 }, "I": { "rate": 6.055311384056781, "BF": 1.060103451940054 }, "K": { "rate": 5.468617488746775, "BF": 0.9896436081966525 }, "L": { "rate": 5.077115826582193, "BF": 0.975888636920944 }, "M": { "rate": 4.488761389904653, "BF": 0.950723389694759 }, "N": { "rate": 5.49851578395059, "BF": 0.9893437476729404 }, "P": { "rate": 5.558268390159356, "BF": 0.9899551144322829 }, "Q": { "rate": 5.61719603038963, "BF": 0.9906647497696338 }, "R": { "rate": 5.426118714365636, "BF": 0.9915693780171462 }, "S": { "rate": 4.364545101737587, "BF": 0.9557270017635134 }, "T": { "rate": 2.572919141434132, "BF": 0.8662591750163648 }, "V": { "rate": 5.539507752072889, "BF": 0.9906015761476124 }, "W": { "rate": 5.630277468662431, "BF": 0.9891876932499593 }, "Y": { "rate": 5.505434516807273, "BF": 0.989044191783421 } } }, "12646": { "G": "ORF1a", "S": 4128, "index": 185, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTA": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12649": { "G": "ORF1a", "S": 4129, "index": 186, "bCFEL": { "p": 0, "a": 14.33371046920479, "b": { "background": 3.747852458133841, "B-1-617": 0.217922169290721, "Reference": 0 }, "pi": { "overall": 0.8347955443964278 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "ACA": 30, "ATA": 1, "ACG": 1 } }, "aa": { "Reference": { "T": 31, "I": 1 } }, "bFEL": { "a": 14.24043411784638, "b": 0.8098752083021072, "p": 0.9288634418318688 }, "bMEME": { "p": 0.6666666666666666, "a": 14.23574537614087, "b+": 21.35361806421129, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 14.3872383846044, "b+": 21.58085757690659, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ -0.3667952979382496, -0.1231919975472201, 0.2433684497128029, -0.02022659549827326, -0.5755422053010966 ] }, "fade": { "A": { "rate": 3.823727052389937, "BF": 0.9270224239599039 }, "C": { "rate": 5.501432645967295, "BF": 0.9898648628886787 }, "D": { "rate": 5.453737698752967, "BF": 0.9898497761552555 }, "E": { "rate": 5.512031373721818, "BF": 0.9899268663129563 }, "F": { "rate": 5.564173837683148, "BF": 0.9899837083293522 }, "G": { "rate": 5.630286273202469, "BF": 0.9895889834559624 }, "H": { "rate": 5.656759099241794, "BF": 0.9901317519345276 }, "I": { "rate": 2.918669569851193, "BF": 0.8776797516980406 }, "K": { "rate": 5.468073612212063, "BF": 0.9900039382088845 }, "L": { "rate": 5.424121714948564, "BF": 0.9898279843848112 }, "M": { "rate": 5.447392430405779, "BF": 0.9902400822618479 }, "N": { "rate": 5.498104366482544, "BF": 0.9897303769979269 }, "P": { "rate": 5.55798098629212, "BF": 0.99032983337907 }, "Q": { "rate": 5.617009213035614, "BF": 0.9910303484566709 }, "R": { "rate": 4.442409964218434, "BF": 0.9513404991941813 }, "S": { "rate": 5.231889572895305, "BF": 0.9919366129405776 }, "T": { "rate": 5.852992916886204, "BF": 1.057360533271792 }, "V": { "rate": 5.538275896928599, "BF": 0.9909594805561928 }, "W": { "rate": 5.630286273202469, "BF": 0.9895889834559624 }, "Y": { "rate": 5.505397488074161, "BF": 0.9894392326518969 } } }, "12652": { "G": "ORF1a", "S": 4130, "index": 187, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCT": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12655": { "G": "ORF1a", "S": 4131, "index": 188, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTA": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12658": { "G": "ORF1a", "S": 4132, "index": 189, "bCFEL": { "p": 0, "a": 0, "b": { "background": 1.889771002615388, "B-1-617": 0.5157084554508564, "Reference": 0 }, "pi": { "overall": 1 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "AGG": 31, "ACG": 1 } }, "aa": { "Reference": { "R": 31, "T": 1 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0, "b+": 2.82801162274558, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 0.6666666666666666, "a": 0, "b+": 0, "w+": 0.25, "b-": 0, "w-": 0.75, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.01737633505219859, -0.1088228686156002, 0.2873400520012543, 0.1912073989428711, 2.889196848047757 ] }, "fade": { "A": { "rate": 5.297166078672388, "BF": 0.9911493959817776 }, "C": { "rate": 5.500434640562124, "BF": 0.9915858417236274 }, "D": { "rate": 5.452130525630917, "BF": 0.9915437195688176 }, "E": { "rate": 5.511033027253243, "BF": 0.9916045798023436 }, "F": { "rate": 5.562244829958903, "BF": 0.9916955472184713 }, "G": { "rate": 5.630325092947717, "BF": 0.9913781219887744 }, "H": { "rate": 5.654965622739421, "BF": 0.9918779376611659 }, "I": { "rate": 5.453622220150222, "BF": 0.992462940408749 }, "K": { "rate": 3.897336474578886, "BF": 0.9242013119069359 }, "L": { "rate": 3.916974679298277, "BF": 0.9266864051379866 }, "M": { "rate": 5.446196937555809, "BF": 0.9919206723247687 }, "N": { "rate": 5.495725596955571, "BF": 0.991431493370428 }, "P": { "rate": 5.556539202291016, "BF": 0.9919928040823897 }, "Q": { "rate": 5.616169507503474, "BF": 0.9926586266384757 }, "R": { "rate": 5.888344497083168, "BF": 1.049388188575201 }, "S": { "rate": 5.228901827534436, "BF": 0.9934311064993726 }, "T": { "rate": 3.776243387866319, "BF": 0.9265170898999125 }, "V": { "rate": 5.532603915808143, "BF": 0.9925474577259604 }, "W": { "rate": 5.630325092947717, "BF": 0.9913781219887744 }, "Y": { "rate": 5.505231140018242, "BF": 0.9912001562806277 } } }, "12661": { "G": "ORF1a", "S": 4133, "index": 190, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCC": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12664": { "G": "ORF1a", "S": 4134, "index": 191, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAT": 32 } }, "aa": { "Reference": { "N": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.295277139506894, "BF": 0.9935955925112926 }, "C": { "rate": 5.498745004180885, "BF": 0.9940936265062419 }, "D": { "rate": 5.451022408515128, "BF": 0.9940631408924001 }, "E": { "rate": 5.510172089084624, "BF": 0.9940977611332888 }, "F": { "rate": 5.560167213040192, "BF": 0.9942233822788132 }, "G": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "H": { "rate": 5.651085659222526, "BF": 0.994395024438923 }, "I": { "rate": 5.44821251735674, "BF": 0.9947492430755533 }, "K": { "rate": 3.932862414564847, "BF": 0.9247822718082317 }, "L": { "rate": 5.421125094492752, "BF": 0.9939845377595354 }, "M": { "rate": 5.44139211348417, "BF": 0.9942761316076113 }, "N": { "rate": 5.831127536500379, "BF": 1.03617828209876 }, "P": { "rate": 5.553870223126912, "BF": 0.9943967165596239 }, "Q": { "rate": 5.61455033413507, "BF": 0.9949647659512815 }, "R": { "rate": 5.411904226374546, "BF": 0.9954324904691897 }, "S": { "rate": 3.837385461207933, "BF": 0.9315626809597355 }, "T": { "rate": 5.269128669029056, "BF": 0.9939101448186954 }, "V": { "rate": 5.523559141470515, "BF": 0.9948329859968217 }, "W": { "rate": 5.630368716232197, "BF": 0.9940042741826768 }, "Y": { "rate": 5.505958336295271, "BF": 0.9938279958650937 } } }, "12667": { "G": "ORF1a", "S": 4135, "index": 192, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TCT": 32 } }, "aa": { "Reference": { "S": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 3.32238984355696, "BF": 0.9037272813595958 }, "C": { "rate": 4.366082190335634, "BF": 0.9431262104330678 }, "D": { "rate": 5.453893629245233, "BF": 0.9896311118162218 }, "E": { "rate": 5.512135355708927, "BF": 0.9897104991546828 }, "F": { "rate": 5.563016123674313, "BF": 0.9896978719675312 }, "G": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "H": { "rate": 5.657056038170456, "BF": 0.9899097927563238 }, "I": { "rate": 4.759868340650387, "BF": 0.9624258504166243 }, "K": { "rate": 5.468215577575892, "BF": 0.9897913317628367 }, "L": { "rate": 5.425274649301689, "BF": 0.989651141561826 }, "M": { "rate": 4.650117668837575, "BF": 0.957701863965928 }, "N": { "rate": 4.2385248037017, "BF": 0.9375476271266477 }, "P": { "rate": 4.719921583239638, "BF": 0.9563852607273914 }, "Q": { "rate": 5.617138637153663, "BF": 0.9908254855327914 }, "R": { "rate": 5.427343151346691, "BF": 0.9917853726360872 }, "S": { "rate": 5.802174530453118, "BF": 1.05838509290214 }, "T": { "rate": 5.274141353917001, "BF": 0.9897230252675463 }, "V": { "rate": 5.538880623852042, "BF": 0.990751202397038 }, "W": { "rate": 5.630282013980454, "BF": 0.9893591451068876 }, "Y": { "rate": 5.505373732544825, "BF": 0.989211145279557 } } }, "12670": { "G": "ORF1a", "S": 4136, "index": 193, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GCT": 32 } }, "aa": { "Reference": { "A": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.6103649987489, "BF": 1.034072300241131 }, "C": { "rate": 5.497357704096383, "BF": 0.9944460808029579 }, "D": { "rate": 5.450914315769896, "BF": 0.9944662371898904 }, "E": { "rate": 5.510132708435626, "BF": 0.9945028091670608 }, "F": { "rate": 5.55986779127037, "BF": 0.994625787014365 }, "G": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "H": { "rate": 5.650323733595499, "BF": 0.9947910585723322 }, "I": { "rate": 5.445463813320678, "BF": 0.9950166923528548 }, "K": { "rate": 5.465835253887162, "BF": 0.9945229936243131 }, "L": { "rate": 5.420863800335724, "BF": 0.994387024139403 }, "M": { "rate": 5.439729962976315, "BF": 0.9946198915399808 }, "N": { "rate": 5.491264217985885, "BF": 0.9943106117372973 }, "P": { "rate": 5.552560174723753, "BF": 0.9947444439488056 }, "Q": { "rate": 5.614250453936481, "BF": 0.9953233423767859 }, "R": { "rate": 5.410833627700861, "BF": 0.9957577535176042 }, "S": { "rate": 3.779539763899132, "BF": 0.9283086123730149 }, "T": { "rate": 4.263831753219312, "BF": 0.9491321274661958 }, "V": { "rate": 4.880777045571673, "BF": 0.9674772186797872 }, "W": { "rate": 5.630374286370275, "BF": 0.9944235151533182 }, "Y": { "rate": 5.506209829712969, "BF": 0.9942539853605677 } } }, "12673": { "G": "ORF1a", "S": 4137, "index": 194, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "GTC": 32 } }, "aa": { "Reference": { "V": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 4.307287808565802, "BF": 0.9496700143349283 }, "C": { "rate": 5.499562448881405, "BF": 0.9939163064183677 }, "D": { "rate": 4.435326697820163, "BF": 0.949328219933636 }, "E": { "rate": 5.509851799452621, "BF": 0.993874275435229 }, "F": { "rate": 5.560143216964589, "BF": 0.9940086524498177 }, "G": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "H": { "rate": 5.651476866419776, "BF": 0.9941910683737735 }, "I": { "rate": 5.448714709065478, "BF": 0.994566636242035 }, "K": { "rate": 5.465857752999177, "BF": 0.9939151967602503 }, "L": { "rate": 4.449484657960352, "BF": 0.9512143221020839 }, "M": { "rate": 4.452020836905762, "BF": 0.9506015614132678 }, "N": { "rate": 5.493891328353341, "BF": 0.9937824664749177 }, "P": { "rate": 5.554619271369872, "BF": 0.9942206235335019 }, "Q": { "rate": 5.614704542045565, "BF": 0.9947800566095065 }, "R": { "rate": 5.413173560239499, "BF": 0.9952941890206048 }, "S": { "rate": 5.22299364242573, "BF": 0.9952536306653142 }, "T": { "rate": 5.26904589994944, "BF": 0.9936974474491607 }, "V": { "rate": 5.854014327067203, "BF": 1.036939965157565 }, "W": { "rate": 5.63036583739895, "BF": 0.9937884292205666 }, "Y": { "rate": 5.505451737929008, "BF": 0.9935914893315412 } } }, "12676": { "G": "ORF1a", "S": 4138, "index": 195, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "AAA": 32 } }, "aa": { "Reference": { "K": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.297091003298223, "BF": 0.9950292844312618 }, "C": { "rate": 5.499293806564856, "BF": 0.9954643903618403 }, "D": { "rate": 5.451054409467385, "BF": 0.9954014429651782 }, "E": { "rate": 5.510016275725392, "BF": 0.9954241409292279 }, "F": { "rate": 5.559183834194609, "BF": 0.9955438388310485 }, "G": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "H": { "rate": 5.648631637010976, "BF": 0.9956955711884977 }, "I": { "rate": 5.446303814328687, "BF": 0.995961328981194 }, "K": { "rate": 5.727252954539042, "BF": 1.029288207725126 }, "L": { "rate": 5.419559847919818, "BF": 0.9952701927027651 }, "M": { "rate": 5.440114815348825, "BF": 0.995571074386721 }, "N": { "rate": 4.029758694176489, "BF": 0.9272220078378122 }, "P": { "rate": 5.553438591464292, "BF": 0.9956928899393649 }, "Q": { "rate": 5.613580478107191, "BF": 0.9961432924644987 }, "R": { "rate": 4.370491564219876, "BF": 0.948952098360475 }, "S": { "rate": 5.219631074696792, "BF": 0.9964134919841596 }, "T": { "rate": 5.26780000299334, "BF": 0.9951846067176142 }, "V": { "rate": 5.518736541403971, "BF": 0.9960177650569073 }, "W": { "rate": 5.630387376969724, "BF": 0.9953790940010153 }, "Y": { "rate": 5.506743947341975, "BF": 0.9952231717922572 } } }, "12679": { "G": "ORF1a", "S": 4139, "index": 196, "bCFEL": { "p": 1, "a": 0, "b": { "background": 0, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 1 }, "pp": 1, "s": { "B-1-617": 1, "Reference": 1 }, "q": 1 }, "cdn": { "Reference": { "TTA": 32 } }, "aa": { "Reference": { "L": 32 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "lMEME": { "p": 1, "a": 0, "b+": 0, "w+": 0, "b-": 0, "w-": 1, "br": 0 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0, 0, 0, 0, 0 ] }, "fade": { "A": { "rate": 5.296750969191259, "BF": 0.9945386006007213 }, "C": { "rate": 5.496008839608748, "BF": 0.9948406664463151 }, "D": { "rate": 5.450877048793679, "BF": 0.9949203030052508 }, "E": { "rate": 5.510089052697951, "BF": 0.994955755405764 }, "F": { "rate": 4.204161915809505, "BF": 0.9334103241281623 }, "G": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "H": { "rate": 5.649477517125627, "BF": 0.995233898461 }, "I": { "rate": 5.121060912835349, "BF": 0.9821687591223197 }, "K": { "rate": 5.465063676975451, "BF": 0.9949383593306517 }, "L": { "rate": 5.70639772473297, "BF": 1.032029571938244 }, "M": { "rate": 5.440582445749659, "BF": 0.9951137744927994 }, "N": { "rate": 5.493332696547962, "BF": 0.9948714030837429 }, "P": { "rate": 5.553804681025784, "BF": 0.9952424643895733 }, "Q": { "rate": 5.613917267847408, "BF": 0.9957244182579306 }, "R": { "rate": 4.526604364385194, "BF": 0.956533649742422 }, "S": { "rate": 5.221929308334516, "BF": 0.9961105377447148 }, "T": { "rate": 5.268266367710666, "BF": 0.9947340427534851 }, "V": { "rate": 4.699162390157347, "BF": 0.9591325383635538 }, "W": { "rate": 5.630380562456343, "BF": 0.9948921255698339 }, "Y": { "rate": 5.506489188463021, "BF": 0.9947301182755116 } } }, "12682": { "G": "ORF1a", "S": 4140, "index": 197, "bCFEL": { "p": 0, "a": 0, "b": { "background": 5.651971820557556, "B-1-617": 0, "Reference": 0 }, "pi": { "overall": 0.9946823441693979 }, "pp": -1, "s": { "B-1-617": 0, "Reference": 0 }, "q": 1 }, "cdn": { "Reference": { "CAG": 30, "CAC": 1, "CAT": 1 } }, "aa": { "Reference": { "Q": 30, "H": 2 } }, "bFEL": { "a": 0, "b": 0, "p": 1 }, "bMEME": { "p": 0.6666666666666666, "a": 0.0001047939488656373, "b+": 1.231388513343972, "w+": 0, "b-": 2.619848721640933e-05, "w-": 1, "br": 0 }, "lMEME": { "p": 0.3226010900378987, "a": 0, "b+": 12.0318826699798, "w+": 0.99999999, "b-": 0, "w-": 1e-08, "br": 1 }, "prime": { "p": [ 1, 1, 1, 1, 1, 1 ], "lambda": [ 0.03644798756061563, -0.3104805457700024, 0.2357212180710769, -0.03138277695602196, -0.005528760550374304 ] }, "fade": { "A": { "rate": 5.308678043450536, "BF": 1.055716315319722 }, "C": { "rate": 5.485855194240376, "BF": 1.055201214399417 }, "D": { "rate": 5.446266138134284, "BF": 1.055385899378762 }, "E": { "rate": 5.500499331126934, "BF": 1.054475503345003 }, "F": { "rate": 5.518132842032017, "BF": 1.055000371827809 }, "G": { "rate": 5.631290855192524, "BF": 1.056763207313764 }, "H": { "rate": 17.73708239321951, "BF": 3.307358513643126 }, "I": { "rate": 5.343982030446722, "BF": 1.049931891253796 }, "K": { "rate": 5.45735425836756, "BF": 1.053932665571368 }, "L": { "rate": 5.39639482035181, "BF": 1.0545826854226 }, "M": { "rate": 5.362035570007507, "BF": 1.052316695364487 }, "N": { "rate": 5.458974630132252, "BF": 1.056085864838289 }, "P": { "rate": 5.511453174502486, "BF": 1.052535778634476 }, "Q": { "rate": 0.4589403382528013, "BF": 0.5346342422907141 }, "R": { "rate": 5.244347172461493, "BF": 1.044187416807419 }, "S": { "rate": 5.129448615617326, "BF": 1.044038260812914 }, "T": { "rate": 5.25116626823532, "BF": 1.05380623570147 }, "V": { "rate": 5.32619888389831, "BF": 1.050191753850974 }, "W": { "rate": 5.631290855192524, "BF": 1.056763207313764 }, "Y": { "rate": 5.533472866110234, "BF": 1.057326684928253 } } } }