Mercurial > repos > iuc > hyphy_fade

view test-data/gard-in1.fa @ 9:e7be036f1616 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 8abccd4b7a288b6a321a6662eec88577ad83b36f"
author iuc
date Wed, 22 Apr 2020 12:12:28 -0400
parents 16b4a3869bd5
children
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>BRO1_1
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO2
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAACTGCAACCCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTGCATAAAGCCATTTACCGTACATA
GCACATTATA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO3_1
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAGCTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO4
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCATACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO5
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACAGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACACCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO6
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAATACATAAAAACCC-AATTC--ACACCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO7_1
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACACCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO8
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGAATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO9
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AACCC--ACATCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT
CAATTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO10
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC
CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTATCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGCACATAAAGCCATTTATCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO11_1
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC
TACCTGTAGTACATAAAAACCC-AACCC--ACATCAAAA----CCCTGCC
CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTGTCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGCACATAAAGTCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC
>BRO12
ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG
TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC
ATTAC-TGCCAGCCACCATGAATATTGTACAGTACCATAAA-TACTTGAC
TACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCTC
CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTATCACACAT
CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC
CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA
GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T
CAGAT-AGGGGTCCCTTGACCACCATCC