Mercurial > repos > iuc > hyphy_meme

comparison macros.xml @ 2:b15d64d85c03 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit f14f2bae2b27dc04e574803c7d4442a64cfe43e4"
author iuc
date Fri, 14 Feb 2020 16:46:45 -0500
parents d02c8e6f7f2a
children 33040ebb30c6
comparison
equal deleted inserted replaced
1:d02c8e6f7f2a 2:b15d64d85c03
78 <requirement type="package" version="@VERSION@"> 78 <requirement type="package" version="@VERSION@">
79 hyphy</requirement> 79 hyphy</requirement>
80 <yield/> 80 <yield/>
81 </requirements> 81 </requirements>
82 </xml> 82 </xml>
83 <token name="@HYPHYMPI@">mpirun -np \${GALAXY_SLOTS:-1} HYPHYMPI</token>
83 <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` && 84 <token name="@HYPHY_ENVIRONMENT@"><![CDATA[export HYPHY=`which hyphy` &&
84 export HYPHY_PATH=`dirname \$HYPHY` && 85 export HYPHY_PATH=`dirname \$HYPHY` &&
85 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token> 86 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&]]></token>
86 <token name="@HYPHY_INVOCATION@"><![CDATA[@HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB ]]></token> 87 <token name="@HYPHY_INVOCATION@"><![CDATA[@HYPHY_ENVIRONMENT@ hyphy LIBPATH=\$HYPHY_LIB ]]></token>
87 </macros> 88 </macros>