Mercurial > repos > iuc > hyphy_meme

comparison hyphy_meme.xml @ 1:d02c8e6f7f2a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 533e8f97b4df382944ac8a31d98e04c9efeb6798"
author iuc
date Thu, 13 Feb 2020 15:03:27 -0500
parents 7b3f9c78cf6d
children b15d64d85c03
comparison
equal deleted inserted replaced
0:7b3f9c78cf6d 1:d02c8e6f7f2a
35 <output name="meme_output" file="meme-out1.json" compare="sim_size"/> 35 <output name="meme_output" file="meme-out1.json" compare="sim_size"/>
36 </test> 36 </test>
37 </tests> 37 </tests>
38 <help><![CDATA[ 38 <help><![CDATA[
39 MEME employs a mixed-effects maximum likelihood approach to test the hypothesis that individual sites have been subject to episodic positive or diversifying selection. In other words, MEME aims to detect sites evolving under positive selection under a proportion of branches. 39 MEME employs a mixed-effects maximum likelihood approach to test the hypothesis that individual sites have been subject to episodic positive or diversifying selection. In other words, MEME aims to detect sites evolving under positive selection under a proportion of branches.
40
41 See the online documentation_ for more information.
42
43 .. _documentation: http://hyphy.org/methods/selection-methods/#meme
40 ]]></help> 44 ]]></help>
41 <expand macro="citations"> 45 <expand macro="citations">
42 <citation type="doi">10.1371/journal.pgen.1002764</citation> 46 <citation type="doi">10.1371/journal.pgen.1002764</citation>
43 </expand> 47 </expand>
44 </tool> 48 </tool>