Mercurial > repos > iuc > hyphy_prime
comparison test-data/gard-in1.fa @ 0:725ef5f6d749 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 751182d5067ac8378199058d9152ebfcaeb4c4b5"
| author | iuc |
|---|---|
| date | Fri, 27 Mar 2020 13:15:01 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:725ef5f6d749 |
|---|---|
| 1 >BRO1_1 | |
| 2 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 3 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 4 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 5 CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC | |
| 6 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 7 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 8 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 9 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 10 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 11 >BRO2 | |
| 12 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 13 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 14 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 15 CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC | |
| 16 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 17 CAACTGCAACCCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 18 CTACCCACCC-TTAACAGTACATAGTGCATAAAGCCATTTACCGTACATA | |
| 19 GCACATTATA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 20 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 21 >BRO3_1 | |
| 22 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 23 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 24 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 25 CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC | |
| 26 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 27 CAGCTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 28 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 29 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 30 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 31 >BRO4 | |
| 32 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 33 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 34 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 35 CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC | |
| 36 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCATACAT | |
| 37 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 38 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 39 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 40 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 41 >BRO5 | |
| 42 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 43 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 44 ATTAC-TGCCAGCCACCATGAATATTGTACAGTACCATAAA-TACTTGAC | |
| 45 CACCTGTAGTACATAAAAACCC-AATCC--ACACCAAAA----CCCCCCC | |
| 46 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 47 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 48 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 49 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 50 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 51 >BRO6 | |
| 52 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 53 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 54 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 55 CACCTGTAATACATAAAAACCC-AATTC--ACACCAAAA----CCCCCCC | |
| 56 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 57 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 58 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 59 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 60 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 61 >BRO7_1 | |
| 62 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 63 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 64 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 65 CACCTGTAGTACATAAAAACCC-AATCC--ACACCAAAA----CCCCCCC | |
| 66 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 67 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 68 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 69 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 70 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 71 >BRO8 | |
| 72 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 73 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 74 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 75 CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC | |
| 76 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 77 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGAATACCAACAAAC | |
| 78 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 79 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 80 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 81 >BRO9 | |
| 82 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 83 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 84 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 85 CACCTGTAGTACATAAAAACCC-AACCC--ACATCAAAA----CCCCCCC | |
| 86 CC-CATGCTTACAAGCAAGTACAGCAACCAACCCTCAA-CTATCACACAT | |
| 87 CAATTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 88 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 89 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 90 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 91 >BRO10 | |
| 92 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 93 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 94 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 95 CACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCCC | |
| 96 CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTATCACACAT | |
| 97 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 98 CTACCCACCC-TTAACAGTACATAGCACATAAAGCCATTTATCGTACATA | |
| 99 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 100 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 101 >BRO11_1 | |
| 102 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 103 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 104 ATTAC-TGCCAGCCACCATGAATATTGTACGGTACCATAAA-TACTTGAC | |
| 105 TACCTGTAGTACATAAAAACCC-AACCC--ACATCAAAA----CCCTGCC | |
| 106 CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTGTCACACAT | |
| 107 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 108 CTACCCACCC-TTAACAGTACATAGCACATAAAGTCATTTACCGTACATA | |
| 109 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 110 CAGAT-AGGGGTCCCTTGACCACCATCC | |
| 111 >BRO12 | |
| 112 ATTCTAATTTAAACTATTCT-CTGTTCTTTCATGGGGAAGCAGATTTGGG | |
| 113 TACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTAC | |
| 114 ATTAC-TGCCAGCCACCATGAATATTGTACAGTACCATAAA-TACTTGAC | |
| 115 TACCTGTAGTACATAAAAACCC-AATCC--ACATCAAAA----CCCCCTC | |
| 116 CC-CATGCTTACAAGCAAGTACAGCAATCAACCTTCAA-CTATCACACAT | |
| 117 CAACTGCAACTCCAAAGCCAC-CCCTCACCCAC-TAGGATACCAACAAAC | |
| 118 CTACCCACCC-TTAACAGTACATAGTACATAAAGCCATTTACCGTACATA | |
| 119 GCACATTACA-GTCAAATCCCTTCTCGTCCCC-ATGG-ATGACCCCCC-T | |
| 120 CAGAT-AGGGGTCCCTTGACCACCATCC |