Mercurial > repos > iuc > hyphy_prime
view test-data/sm19-out1.json @ 19:e2942cd87117 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 2063bc1f8f9cb97de147b86dbe9189fc496b206a"
| author | iuc |
|---|---|
| date | Wed, 09 Jun 2021 17:36:22 +0000 |
| parents | 725ef5f6d749 |
| children |
line wrap: on
line source
{ "compartments":2, "events":{ "C019-B2_18_1":{ "from":"Semen", "to":"Blood" }, "C019-B2_24_1":{ "from":"Semen", "to":"Blood" }, "C019-B2_45_1":{ "from":"Semen", "to":"Blood" }, "C019-B2_46_2":{ "from":"Semen", "to":"Blood" }, "C019-B2_47_3":{ "from":"Semen", "to":"Blood" }, "C019-S2_1_1":{ "from":"Blood", "to":"Semen" }, "C019-S2_22_1":{ "from":"Blood", "to":"Semen" }, "C019-S2_2_1":{ "from":"Blood", "to":"Semen" }, "C019-S2_9_1":{ "from":"Blood", "to":"Semen" }, "Node2":{ "from":"Semen", "to":"Blood" }, "Node28":{ "from":"Blood", "to":"Semen" }, "Node34":{ "from":"Blood", "to":"Semen" }, "Node45":{ "from":"Semen", "to":"Blood" }, "Node52":{ "from":"Semen", "to":"Blood" }, "Node59":{ "from":"Blood", "to":"Semen" }, "Node88":{ "from":"Semen", "to":"Blood" } }, "leaf-count":50, "migrations":16, "node-migrations":{ "Node10":1, "Node11":1, "Node12":0, "Node13":0, "Node2":6, "Node20":2, "Node21":1, "Node22":0, "Node23":0, "Node28":1, "Node29":0, "Node3":5, "Node33":1, "Node34":1, "Node38":0, "Node4":4, "Node41":6, "Node42":6, "Node43":1, "Node44":1, "Node45":1, "Node46":0, "Node5":0, "Node52":5, "Node53":1, "Node54":1, "Node58":3, "Node59":3, "Node60":1, "Node61":1, "Node62":1, "Node67":1, "Node68":1, "Node69":1, "Node70":1, "Node71":1, "Node79":16, "Node8":4, "Node80":4, "Node81":1, "Node82":1, "Node86":3, "Node87":1, "Node88":1, "Node9":2, "Node92":2, "Node93":1, "Node94":1 }, "node-p-value":{ "panmictic":{ "Node10":0.3866133866133866, "Node11":0.6103896103896104, "Node12":0.1568431568431568, "Node13":0.3486513486513487, "Node2":0.4045954045954046, "Node20":0.5954045954045954, "Node21":0.6183816183816184, "Node22":0.1538461538461539, "Node23":0.3626373626373626, "Node28":0.9050949050949051, "Node29":0.3786213786213786, "Node3":0.2897102897102897, "Node33":0.8901098901098901, "Node34":1, "Node38":0.3966033966033966, "Node4":0.2787212787212787, "Node41":0.3816183816183816, "Node42":0.4715284715284715, "Node43":0.3926073926073926, "Node44":0.6113886113886113, "Node45":0.8561438561438561, "Node46":0.4015984015984016, "Node5":0.3886113886113886, "Node52":0.7592407592407593, "Node53":0.8971028971028971, "Node54":1, "Node58":0.3706293706293706, "Node59":0.5024975024975025, "Node60":0.5954045954045954, "Node61":0.8671328671328671, "Node62":1, "Node67":0.2117882117882118, "Node68":0.3646353646353646, "Node69":0.5784215784215784, "Node70":0.8501498501498501, "Node71":1, "Node79":0.3846153846153846, "Node8":0.5424575424575424, "Node80":0.926073926073926, "Node81":0.8901098901098901, "Node82":1, "Node86":0.967032967032967, "Node87":0.8901098901098901, "Node88":1, "Node9":0.7902097902097902, "Node92":1, "Node93":0.8721278721278721, "Node94":1 }, "structured":{ "Node10":0.935064935064935, "Node11":1, "Node12":0.8671328671328671, "Node13":1, "Node2":0.7232767232767233, "Node20":0.9760239760239761, "Node21":1, "Node22":0.8731268731268731, "Node23":1, "Node28":0.9050949050949051, "Node29":1, "Node3":0.9100899100899101, "Node33":1, "Node34":1, "Node38":1, "Node4":0.936063936063936, "Node41":0.7002997002997003, "Node42":0.8021978021978022, "Node43":0.9410589410589411, "Node44":1, "Node45":0.8561438561438561, "Node46":1, "Node5":1, "Node52":0.7592407592407593, "Node53":1, "Node54":1, "Node58":0.8061938061938062, "Node59":0.9170829170829171, "Node60":1, "Node61":0.8671328671328671, "Node62":1, "Node67":0.7602397602397603, "Node68":0.929070929070929, "Node69":1, "Node70":0.8501498501498501, "Node71":1, "Node79":0.7822177822177823, "Node8":0.8871128871128872, "Node80":1, "Node81":1, "Node82":1, "Node86":0.967032967032967, "Node87":0.8901098901098901, "Node88":1, "Node9":0.7902097902097902, "Node92":1, "Node93":1, "Node94":1 } }, "p-value":{ "panmictic":0.3846153846153846, "structured":0.7822177822177823 }, "partition-counts":{ "Blood":25, "Semen":25 }, "partitions":{ "Blood":{ "0":"C019-B2_35_1", "1":"C019-B2_52_1", "10":"C019-B2_53_1", "11":"C019-B2_54_1", "12":"C019-B2_9_1", "13":"C019-B2_10_1", "14":"C019-B2_1_2", "15":"C019-B2_17_3", "16":"C019-B2_16_1", "17":"C019-B2_18_1", "18":"C019-B2_24_1", "19":"C019-B2_13_1", "2":"C019-B2_28_1", "20":"C019-B2_45_1", "21":"C019-B2_32_1", "22":"C019-B2_43_2", "23":"C019-B2_46_2", "24":"C019-B2_47_3", "3":"C019-B2_29_1", "4":"C019-B2_31_1", "5":"C019-B2_34_1", "6":"C019-B2_4_1", "7":"C019-B2_6_3", "8":"C019-B2_5_1", "9":"C019-B2_42_2" }, "Semen":{ "0":"C019-S2_9_1", "1":"C019-S2_2_1", "10":"C019-S2_22_1", "11":"C019-S2_25_2", "12":"C019-S2_24_1", "13":"C019-S2_23_2", "14":"C019-S2_19_1", "15":"C019-S2_17_1", "16":"C019-S2_18_2", "17":"C019-S2_21_1", "18":"C019-S2_20_2", "19":"C019-S2_13_1", "2":"C019-S2_1_1", "20":"C019-S2_8_1", "21":"C019-S2_14_1", "22":"C019-S2_11_1", "23":"C019-S2_15_4", "24":"C019-S2_16_1", "3":"C019-S2_4_1", "4":"C019-S2_6_1", "5":"C019-S2_7_1", "6":"C019-S2_10_1", "7":"C019-S2_12_2", "8":"C019-S2_3_1", "9":"C019-S2_5_1" } }, "replicates":1000, "simulations":{ "panmictic": [ [11], [12], [12], [12], [12], [12], [12], [12], [12], [12], [12], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [13], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [21], [21], [21], [21], [21], [21], [21], [21], [21], [21], [21], [21], [21], [21], [22], [22], [22], [22] ], "structured": [ [12], [12], [12], [12], [12], [13], [13], [13], [13], [13], [13], [13], [13], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [14], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [15], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [16], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [17], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [18], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [19], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [20], [21] ] }, "structured-cutoff":18, "tree":{ "annotated_string":"(((((C019-B2_35_1,C019-B2_52_1)Node5,((((((C019-B2_28_1,C019-B2_29_1)Node13,C019-B2_31_1)Node12,C019-S2_9_1)Node11,C019-B2_34_1)Node10,C019-S2_2_1)Node9,((((C019-B2_4_1,C019-B2_6_3)Node23,C019-B2_5_1)Node22,C019-S2_1_1)Node21,((C019-S2_4_1,C019-S2_6_1)Node29,C019-S2_7_1)Node28)Node20)Node8)Node4,((C019-S2_10_1,C019-S2_12_2)Node34,C019-B2_42_2)Node33)Node3,(C019-B2_53_1,C019-B2_54_1)Node38)Node2,((((((C019-B2_9_1,C019-B2_10_1)Node46,C019-B2_1_2)Node45,C019-S2_3_1)Node44,C019-S2_5_1)Node43,(((C019-B2_17_3,C019-S2_22_1)Node54,C019-B2_16_1)Node53,(((((C019-B2_18_1,C019-S2_25_2)Node62,C019-S2_24_1)Node61,C019-S2_23_2)Node60,(((((C019-B2_24_1,C019-S2_19_1)Node71,C019-S2_17_1)Node70,C019-S2_18_2)Node69,C019-S2_21_1)Node68,C019-S2_20_2)Node67)Node59,C019-B2_13_1)Node58)Node52)Node42,C019-S2_13_1)Node41,(((C019-B2_45_1,C019-S2_8_1)Node82,C019-S2_14_1)Node81,(((C019-B2_32_1,C019-B2_43_2)Node88,C019-S2_11_1)Node87,(((C019-B2_46_2,C019-S2_15_4)Node94,C019-S2_16_1)Node93,C019-B2_47_3)Node92)Node86)Node80);", "branch length":{ "C019-B2_10_1":0.002149, "C019-B2_13_1":0.006181, "C019-B2_16_1":0.003129, "C019-B2_17_3":1e-10, "C019-B2_18_1":1e-10, "C019-B2_1_2":0.011845, "C019-B2_24_1":0.004304, "C019-B2_28_1":0.002896, "C019-B2_29_1":0.000909, "C019-B2_31_1":0.003387, "C019-B2_32_1":0.005635, "C019-B2_34_1":0.003365, "C019-B2_35_1":0.005858, "C019-B2_42_2":0.000987, "C019-B2_43_2":0.001995, "C019-B2_45_1":0.000837, "C019-B2_46_2":1e-10, "C019-B2_47_3":0.000877, "C019-B2_4_1":0.002924, "C019-B2_52_1":0.001773, "C019-B2_53_1":0.002654, "C019-B2_54_1":0.001151, "C019-B2_5_1":0.001994, "C019-B2_6_3":0.0008809999999999999, "C019-B2_9_1":0.003599, "C019-S2_10_1":0.005429, "C019-S2_11_1":0.002993, "C019-S2_12_2":0.000352, "C019-S2_13_1":1e-10, "C019-S2_14_1":0.000517, "C019-S2_15_4":1e-10, "C019-S2_16_1":0.002229, "C019-S2_17_1":0.00129, "C019-S2_18_2":0.004477, "C019-S2_19_1":1e-10, "C019-S2_1_1":0.011533, "C019-S2_20_2":0.003028, "C019-S2_21_1":0.001446, "C019-S2_22_1":1e-10, "C019-S2_23_2":0.003047, "C019-S2_24_1":1e-10, "C019-S2_25_2":1e-10, "C019-S2_2_1":0.011763, "C019-S2_3_1":0.009874000000000001, "C019-S2_4_1":0.006447, "C019-S2_5_1":0.009998, "C019-S2_6_1":0.00696, "C019-S2_7_1":0.004624, "C019-S2_8_1":0.006794, "C019-S2_9_1":0.001965, "Node10":0.00173, "Node11":0.000428, "Node12":0.001252, "Node13":0.004372, "Node2":0.000398, "Node20":0.001452, "Node21":0.002707, "Node22":0.006052, "Node23":0.001821, "Node28":0.003256, "Node29":0.001115, "Node3":0.000528, "Node33":0.000651, "Node34":0.000931, "Node38":0.002202, "Node4":0.000396, "Node41":0.001963, "Node42":0.001411, "Node43":0.000267, "Node44":0.000158, "Node45":0.001658, "Node46":0.003701, "Node5":0.00094, "Node52":0.003349, "Node53":0.000262, "Node54":0.000676, "Node58":0.00092, "Node59":0.001275, "Node60":0.0004929999999999999, "Node61":0.000769, "Node62":3e-05, "Node67":0.002252, "Node68":0.00083, "Node69":0.000852, "Node70":0.002822, "Node71":0.00459, "Node8":0.002006, "Node80":0.000346, "Node81":0.000377, "Node82":0.001393, "Node86":0.000732, "Node87":0.000552, "Node88":0.000913, "Node9":0.000594, "Node92":0.000862, "Node93":0.001073, "Node94":0.001576 }, "file":"/tmp/tmpkKm6Pm/job_working_directory/000/2/working/sm19_input.nhx", "meta":{ }, "model_list": [ [""] ], "model_map":{ "C019-B2_10_1":"", "C019-B2_13_1":"", "C019-B2_16_1":"", "C019-B2_17_3":"", "C019-B2_18_1":"", "C019-B2_1_2":"", "C019-B2_24_1":"", "C019-B2_28_1":"", "C019-B2_29_1":"", "C019-B2_31_1":"", "C019-B2_32_1":"", "C019-B2_34_1":"", "C019-B2_35_1":"", "C019-B2_42_2":"", "C019-B2_43_2":"", "C019-B2_45_1":"", "C019-B2_46_2":"", "C019-B2_47_3":"", "C019-B2_4_1":"", "C019-B2_52_1":"", "C019-B2_53_1":"", "C019-B2_54_1":"", "C019-B2_5_1":"", "C019-B2_6_3":"", "C019-B2_9_1":"", "C019-S2_10_1":"", "C019-S2_11_1":"", "C019-S2_12_2":"", "C019-S2_13_1":"", "C019-S2_14_1":"", "C019-S2_15_4":"", "C019-S2_16_1":"", "C019-S2_17_1":"", "C019-S2_18_2":"", "C019-S2_19_1":"", "C019-S2_1_1":"", "C019-S2_20_2":"", "C019-S2_21_1":"", "C019-S2_22_1":"", "C019-S2_23_2":"", "C019-S2_24_1":"", "C019-S2_25_2":"", "C019-S2_2_1":"", "C019-S2_3_1":"", "C019-S2_4_1":"", "C019-S2_5_1":"", "C019-S2_6_1":"", "C019-S2_7_1":"", "C019-S2_8_1":"", "C019-S2_9_1":"", "Node10":"", "Node11":"", "Node12":"", "Node13":"", "Node2":"", "Node20":"", "Node21":"", "Node22":"", "Node23":"", "Node28":"", "Node29":"", "Node3":"", "Node33":"", "Node34":"", "Node38":"", "Node4":"", "Node41":"", "Node42":"", "Node43":"", "Node44":"", "Node45":"", "Node46":"", "Node5":"", "Node52":"", "Node53":"", "Node54":"", "Node58":"", "Node59":"", "Node60":"", "Node61":"", "Node62":"", "Node67":"", "Node68":"", "Node69":"", "Node70":"", "Node71":"", "Node8":"", "Node80":"", "Node81":"", "Node82":"", "Node86":"", "Node87":"", "Node88":"", "Node9":"", "Node92":"", "Node93":"", "Node94":"" }, "partitioned":{ "C019-B2_10_1":"leaf", "C019-B2_13_1":"leaf", "C019-B2_16_1":"leaf", "C019-B2_17_3":"leaf", "C019-B2_18_1":"leaf", "C019-B2_1_2":"leaf", "C019-B2_24_1":"leaf", "C019-B2_28_1":"leaf", "C019-B2_29_1":"leaf", "C019-B2_31_1":"leaf", "C019-B2_32_1":"leaf", "C019-B2_34_1":"leaf", "C019-B2_35_1":"leaf", "C019-B2_42_2":"leaf", "C019-B2_43_2":"leaf", "C019-B2_45_1":"leaf", "C019-B2_46_2":"leaf", "C019-B2_47_3":"leaf", "C019-B2_4_1":"leaf", "C019-B2_52_1":"leaf", "C019-B2_53_1":"leaf", "C019-B2_54_1":"leaf", "C019-B2_5_1":"leaf", "C019-B2_6_3":"leaf", "C019-B2_9_1":"leaf", "C019-S2_10_1":"leaf", "C019-S2_11_1":"leaf", "C019-S2_12_2":"leaf", "C019-S2_13_1":"leaf", "C019-S2_14_1":"leaf", "C019-S2_15_4":"leaf", "C019-S2_16_1":"leaf", "C019-S2_17_1":"leaf", "C019-S2_18_2":"leaf", "C019-S2_19_1":"leaf", "C019-S2_1_1":"leaf", "C019-S2_20_2":"leaf", "C019-S2_21_1":"leaf", "C019-S2_22_1":"leaf", "C019-S2_23_2":"leaf", "C019-S2_24_1":"leaf", "C019-S2_25_2":"leaf", "C019-S2_2_1":"leaf", "C019-S2_3_1":"leaf", "C019-S2_4_1":"leaf", "C019-S2_5_1":"leaf", "C019-S2_6_1":"leaf", "C019-S2_7_1":"leaf", "C019-S2_8_1":"leaf", "C019-S2_9_1":"leaf", "Node10":"internal", "Node11":"internal", "Node12":"internal", "Node13":"internal", "Node2":"internal", "Node20":"internal", "Node21":"internal", "Node22":"internal", "Node23":"internal", "Node28":"internal", "Node29":"internal", "Node3":"internal", "Node33":"internal", "Node34":"internal", "Node38":"internal", "Node4":"internal", "Node41":"internal", "Node42":"internal", "Node43":"internal", "Node44":"internal", "Node45":"internal", "Node46":"internal", "Node5":"internal", "Node52":"internal", "Node53":"internal", "Node54":"internal", "Node58":"internal", "Node59":"internal", "Node60":"internal", "Node61":"internal", "Node62":"internal", "Node67":"internal", "Node68":"internal", "Node69":"internal", "Node70":"internal", "Node71":"internal", "Node8":"internal", "Node80":"internal", "Node81":"internal", "Node82":"internal", "Node86":"internal", "Node87":"internal", "Node88":"internal", "Node9":"internal", "Node92":"internal", "Node93":"internal", "Node94":"internal" }, "rooted":0, "string":"(((((C019-B2_35_1,C019-B2_52_1)Node5,((((((C019-B2_28_1,C019-B2_29_1)Node13,C019-B2_31_1)Node12,C019-S2_9_1)Node11,C019-B2_34_1)Node10,C019-S2_2_1)Node9,((((C019-B2_4_1,C019-B2_6_3)Node23,C019-B2_5_1)Node22,C019-S2_1_1)Node21,((C019-S2_4_1,C019-S2_6_1)Node29,C019-S2_7_1)Node28)Node20)Node8)Node4,((C019-S2_10_1,C019-S2_12_2)Node34,C019-B2_42_2)Node33)Node3,(C019-B2_53_1,C019-B2_54_1)Node38)Node2,((((((C019-B2_9_1,C019-B2_10_1)Node46,C019-B2_1_2)Node45,C019-S2_3_1)Node44,C019-S2_5_1)Node43,(((C019-B2_17_3,C019-S2_22_1)Node54,C019-B2_16_1)Node53,(((((C019-B2_18_1,C019-S2_25_2)Node62,C019-S2_24_1)Node61,C019-S2_23_2)Node60,(((((C019-B2_24_1,C019-S2_19_1)Node71,C019-S2_17_1)Node70,C019-S2_18_2)Node69,C019-S2_21_1)Node68,C019-S2_20_2)Node67)Node59,C019-B2_13_1)Node58)Node52)Node42,C019-S2_13_1)Node41,(((C019-B2_45_1,C019-S2_8_1)Node82,C019-S2_14_1)Node81,(((C019-B2_32_1,C019-B2_43_2)Node88,C019-S2_11_1)Node87,(((C019-B2_46_2,C019-S2_15_4)Node94,C019-S2_16_1)Node93,C019-B2_47_3)Node92)Node86)Node80)", "string_with_lengths":"(((((C019-B2_35_1:0.005858,C019-B2_52_1:0.001773)Node5:0.00094,((((((C019-B2_28_1:0.002896,C019-B2_29_1:0.000909)Node13:0.004372,C019-B2_31_1:0.003387)Node12:0.001252,C019-S2_9_1:0.001965)Node11:0.000428,C019-B2_34_1:0.003365)Node10:0.00173,C019-S2_2_1:0.011763)Node9:0.000594,((((C019-B2_4_1:0.002924,C019-B2_6_3:0.0008809999999999999)Node23:0.001821,C019-B2_5_1:0.001994)Node22:0.006052,C019-S2_1_1:0.011533)Node21:0.002707,((C019-S2_4_1:0.006447,C019-S2_6_1:0.00696)Node29:0.001115,C019-S2_7_1:0.004624)Node28:0.003256)Node20:0.001452)Node8:0.002006)Node4:0.000396,((C019-S2_10_1:0.005429,C019-S2_12_2:0.000352)Node34:0.000931,C019-B2_42_2:0.000987)Node33:0.000651)Node3:0.000528,(C019-B2_53_1:0.002654,C019-B2_54_1:0.001151)Node38:0.002202)Node2:0.000398,((((((C019-B2_9_1:0.003599,C019-B2_10_1:0.002149)Node46:0.003701,C019-B2_1_2:0.011845)Node45:0.001658,C019-S2_3_1:0.009874000000000001)Node44:0.000158,C019-S2_5_1:0.009998)Node43:0.000267,(((C019-B2_17_3:1e-10,C019-S2_22_1:1e-10)Node54:0.000676,C019-B2_16_1:0.003129)Node53:0.000262,(((((C019-B2_18_1:1e-10,C019-S2_25_2:1e-10)Node62:3e-05,C019-S2_24_1:1e-10)Node61:0.000769,C019-S2_23_2:0.003047)Node60:0.0004929999999999999,(((((C019-B2_24_1:0.004304,C019-S2_19_1:1e-10)Node71:0.00459,C019-S2_17_1:0.00129)Node70:0.002822,C019-S2_18_2:0.004477)Node69:0.000852,C019-S2_21_1:0.001446)Node68:0.00083,C019-S2_20_2:0.003028)Node67:0.002252)Node59:0.001275,C019-B2_13_1:0.006181)Node58:0.00092)Node52:0.003349)Node42:0.001411,C019-S2_13_1:1e-10)Node41:0.001963,(((C019-B2_45_1:0.000837,C019-S2_8_1:0.006794)Node82:0.001393,C019-S2_14_1:0.000517)Node81:0.000377,(((C019-B2_32_1:0.005635,C019-B2_43_2:0.001995)Node88:0.000913,C019-S2_11_1:0.002993)Node87:0.000552,(((C019-B2_46_2:1e-10,C019-S2_15_4:1e-10)Node94:0.001576,C019-S2_16_1:0.002229)Node93:0.001073,C019-B2_47_3:0.000877)Node92:0.000862)Node86:0.000732)Node80:0.000346)" }, "tree-p-panmictic":"(((((C019-B2_35_1:0.005858,C019-B2_52_1:0.001773)0.3886113886113886:0.00094,((((((C019-B2_28_1:0.002896,C019-B2_29_1:0.000909)0.3486513486513487:0.004372,C019-B2_31_1:0.003387)0.1568431568431568:0.001252,C019-S2_9_1:0.001965)0.6103896103896104:0.000428,C019-B2_34_1:0.003365)0.3866133866133866:0.00173,C019-S2_2_1:0.011763)0.7902097902097902:0.000594,((((C019-B2_4_1:0.002924,C019-B2_6_3:0.0008809999999999999)0.3626373626373626:0.001821,C019-B2_5_1:0.001994)0.1538461538461539:0.006052,C019-S2_1_1:0.011533)0.6183816183816184:0.002707,((C019-S2_4_1:0.006447,C019-S2_6_1:0.00696)0.3786213786213786:0.001115,C019-S2_7_1:0.004624)0.9050949050949051:0.003256)0.5954045954045954:0.001452)0.5424575424575424:0.002006)0.2787212787212787:0.000396,((C019-S2_10_1:0.005429,C019-S2_12_2:0.000352)1:0.000931,C019-B2_42_2:0.000987)0.8901098901098901:0.000651)0.2897102897102897:0.000528,(C019-B2_53_1:0.002654,C019-B2_54_1:0.001151)0.3966033966033966:0.002202)0.4045954045954046:0.000398,((((((C019-B2_9_1:0.003599,C019-B2_10_1:0.002149)0.4015984015984016:0.003701,C019-B2_1_2:0.011845)0.8561438561438561:0.001658,C019-S2_3_1:0.009874000000000001)0.6113886113886113:0.000158,C019-S2_5_1:0.009998)0.3926073926073926:0.000267,(((C019-B2_17_3:1e-10,C019-S2_22_1:1e-10)1:0.000676,C019-B2_16_1:0.003129)0.8971028971028971:0.000262,(((((C019-B2_18_1:1e-10,C019-S2_25_2:1e-10)1:3e-05,C019-S2_24_1:1e-10)0.8671328671328671:0.000769,C019-S2_23_2:0.003047)0.5954045954045954:0.0004929999999999999,(((((C019-B2_24_1:0.004304,C019-S2_19_1:1e-10)1:0.00459,C019-S2_17_1:0.00129)0.8501498501498501:0.002822,C019-S2_18_2:0.004477)0.5784215784215784:0.000852,C019-S2_21_1:0.001446)0.3646353646353646:0.00083,C019-S2_20_2:0.003028)0.2117882117882118:0.002252)0.5024975024975025:0.001275,C019-B2_13_1:0.006181)0.3706293706293706:0.00092)0.7592407592407593:0.003349)0.4715284715284715:0.001411,C019-S2_13_1:1e-10)0.3816183816183816:0.001963,(((C019-B2_45_1:0.000837,C019-S2_8_1:0.006794)1:0.001393,C019-S2_14_1:0.000517)0.8901098901098901:0.000377,(((C019-B2_32_1:0.005635,C019-B2_43_2:0.001995)1:0.000913,C019-S2_11_1:0.002993)0.8901098901098901:0.000552,(((C019-B2_46_2:1e-10,C019-S2_15_4:1e-10)1:0.001576,C019-S2_16_1:0.002229)0.8721278721278721:0.001073,C019-B2_47_3:0.000877)1:0.000862)0.967032967032967:0.000732)0.926073926073926:0.000346)0.3846153846153846", "tree-p-structured":"(((((C019-B2_35_1:0.005858,C019-B2_52_1:0.001773)1:0.00094,((((((C019-B2_28_1:0.002896,C019-B2_29_1:0.000909)1:0.004372,C019-B2_31_1:0.003387)0.8671328671328671:0.001252,C019-S2_9_1:0.001965)1:0.000428,C019-B2_34_1:0.003365)0.935064935064935:0.00173,C019-S2_2_1:0.011763)0.7902097902097902:0.000594,((((C019-B2_4_1:0.002924,C019-B2_6_3:0.0008809999999999999)1:0.001821,C019-B2_5_1:0.001994)0.8731268731268731:0.006052,C019-S2_1_1:0.011533)1:0.002707,((C019-S2_4_1:0.006447,C019-S2_6_1:0.00696)1:0.001115,C019-S2_7_1:0.004624)0.9050949050949051:0.003256)0.9760239760239761:0.001452)0.8871128871128872:0.002006)0.936063936063936:0.000396,((C019-S2_10_1:0.005429,C019-S2_12_2:0.000352)1:0.000931,C019-B2_42_2:0.000987)1:0.000651)0.9100899100899101:0.000528,(C019-B2_53_1:0.002654,C019-B2_54_1:0.001151)1:0.002202)0.7232767232767233:0.000398,((((((C019-B2_9_1:0.003599,C019-B2_10_1:0.002149)1:0.003701,C019-B2_1_2:0.011845)0.8561438561438561:0.001658,C019-S2_3_1:0.009874000000000001)1:0.000158,C019-S2_5_1:0.009998)0.9410589410589411:0.000267,(((C019-B2_17_3:1e-10,C019-S2_22_1:1e-10)1:0.000676,C019-B2_16_1:0.003129)1:0.000262,(((((C019-B2_18_1:1e-10,C019-S2_25_2:1e-10)1:3e-05,C019-S2_24_1:1e-10)0.8671328671328671:0.000769,C019-S2_23_2:0.003047)1:0.0004929999999999999,(((((C019-B2_24_1:0.004304,C019-S2_19_1:1e-10)1:0.00459,C019-S2_17_1:0.00129)0.8501498501498501:0.002822,C019-S2_18_2:0.004477)1:0.000852,C019-S2_21_1:0.001446)0.929070929070929:0.00083,C019-S2_20_2:0.003028)0.7602397602397603:0.002252)0.9170829170829171:0.001275,C019-B2_13_1:0.006181)0.8061938061938062:0.00092)0.7592407592407593:0.003349)0.8021978021978022:0.001411,C019-S2_13_1:1e-10)0.7002997002997003:0.001963,(((C019-B2_45_1:0.000837,C019-S2_8_1:0.006794)1:0.001393,C019-S2_14_1:0.000517)1:0.000377,(((C019-B2_32_1:0.005635,C019-B2_43_2:0.001995)1:0.000913,C019-S2_11_1:0.002993)0.8901098901098901:0.000552,(((C019-B2_46_2:1e-10,C019-S2_15_4:1e-10)1:0.001576,C019-S2_16_1:0.002229)1:0.001073,C019-B2_47_3:0.000877)1:0.000862)0.967032967032967:0.000732)1:0.000346)0.7822177822177823" }