Mercurial > repos > iuc > hyphy_relax

comparison hyphy_relax.xml @ 32:49885a825dc1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 4bb2092ac089e709bdc0ec3c3680f47e17be509a"
author iuc
date Wed, 30 Mar 2022 00:12:50 +0000
parents 056cd46735b8
children 7207313de5a8
comparison
equal deleted inserted replaced
31:056cd46735b8 32:49885a825dc1
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="hyphy_relax" name="HyPhy-RELAX" version="@TOOL_VERSION@+galaxy1" profile="19.09"> 2 <tool id="hyphy_relax" name="HyPhy-RELAX" version="@TOOL_VERSION@+galaxy1" profile="19.09">
3 <description>Detect relaxed selection in a codon-based 3 <description>Detect relaxed selection in a codon-based
4 phylogenetic framework</description> 4 phylogenetic framework</description>
5 <expand macro="bio_tools"/>
6 <macros> 5 <macros>
7 <import>macros.xml</import> 6 <import>macros.xml</import>
8 </macros> 7 </macros>
8 <expand macro="bio_tools"/>
9 <expand macro="requirements"/> 9 <expand macro="requirements"/>
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
11 @SYMLINK_FILES@ 11 @SYMLINK_FILES@
12 export OMP_NUM_THREADS="\${GALAXY_SLOTS:-1}" && 12 export OMP_NUM_THREADS="\${GALAXY_SLOTS:-1}" &&
13 hyphy relax 13 hyphy relax
58 <param name="srv_options" value="specify" /> 58 <param name="srv_options" value="specify" />
59 <param name="save_alternative_model" value="true" /> 59 <param name="save_alternative_model" value="true" />
60 <param name="test" value="PR" /> 60 <param name="test" value="PR" />
61 <param name="srv" value="Yes" /> 61 <param name="srv" value="Yes" />
62 <output name="relax_output" file="relax-out2-1.json" compare="sim_size"/> 62 <output name="relax_output" file="relax-out2-1.json" compare="sim_size"/>
63 <output name="alternative_model" file="relax-out2-2.json" compare="sim_size"/>
64 </test> 63 </test>
65 </tests> 64 </tests>
66 <help><![CDATA[ 65 <help><![CDATA[
67 RELAX: a test for selection differences 66 RELAX: a test for selection differences
68 ======================================= 67 =======================================