Mercurial > repos > iuc > hyphy_sm19

diff macros.xml @ 16:2126c9e28ce6 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit f6cabbd9eb2eea9f5d44fe9836cc5f6d6087a839"
author iuc
date Fri, 30 Oct 2020 16:25:42 +0000
parents 40e9160dbbbb
children 92ef8f2da655
line wrap: on
line diff
--- a/macros.xml	Fri Sep 18 21:07:08 2020 +0000
+++ b/macros.xml	Fri Oct 30 16:25:42 2020 +0000
@@ -107,14 +107,14 @@
             <yield/>
         </citations>
     </xml>
-    <token name="@VERSION@">2.5.17</token>
+    <token name="@VERSION@">2.5.21</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@VERSION@">hyphy</requirement>
             <yield/>
         </requirements>
     </xml>
-    <token name="@HYPHYMPI@">\${GALAXY_MPIRUN:-mpirun -np \${GALAXY_SLOTS:-1}} HYPHYMPI</token>
+    <token name="@HYPHYMPI@">\${GALAXY_MPIRUN:-mpirun -mca orte_tmpdir_base "\${TMPDIR:-.}" -np \${GALAXY_SLOTS:-1}} HYPHYMPI</token>
     <token name="@CATCH_MPIERR@"><![CDATA[
         EC=\$? ;
         if [ \$EC -ne 0 ] ; then