Mercurial > repos > iuc > icescreen
view test-data/NC_004668_137848_164286_detected_ME.summary @ 2:f08181349fc4 draft
"planemo upload for repository https://forgemia.inra.fr/ices_imes_analysis/icescreen commit f826da6f47b642df169ab0747d6363326e944114"
author | iuc |
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date | Sat, 02 Apr 2022 21:05:10 +0000 |
parents | 7c77b2896ac2 |
children | 2bb38197ff75 |
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##################### Mobile elements detection statistics ##################### # Number of complete elements Complete ICE (4 types of SP): 1 Complete IME (R+I, R+C+I): 0 # Number of complete modules Conjugation module (R+C+V): 0 Mobilizable element (R+C with size <= 10 CDS): 0 # Number of partial elements Partial ICE (at least V): 0 Other partial element (R+C, R+V, V+C with size > 10 CDS): 0 # Composite elements Total nested elements (partial or complete): 0 Host element: 0 Guest element: 0 Element that are both host and guest: 0 ################### Signature proteins detection statistics #################### # Total SP detected Total SP: 4 Total Integrase: 1 Total Relaxase: 1 Total Coupling protein: 1 Total VirB4: 1 # Unassigned SP Unassigned SP: 0 Unassigned Integrase: 0 Unassigned Relaxase: 0 Unassigned Coupling protein: 0 Unassigned VirB4: 0 ############################# Segments statistics ############################## Number of segments: 1 Segment with one element: 1 Segment with several elements: 0 Segment with nested elements: 0 Segment with no element: 0 ############################### Parameters used ################################ Maximum CDS numbers in initial segments: 100 Maximum CDS numbers in an IME element: 10