<?xml version="1.0"?>
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    <token name="@TOOL_VERSION@">1.5.3</token>
    <token name="@VERSION_SUFFIX@">0</token>
    <token name="@PROFILE@">20.01</token>
    <xml name="edam_ontology">
        <edam_topics>
            <edam_topic>topic_0796</edam_topic>
            <edam_topic>topic_3174</edam_topic>
        </edam_topics>
        <edam_operations>
            <edam_operation>operation_0484</edam_operation>
            <edam_operation>operation_3209</edam_operation>           
            <edam_operation>operation_3730</edam_operation>
        </edam_operations>
    </xml>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@TOOL_VERSION@">instrain</requirement>
            <yield/>
        </requirements>
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    <token name="@HELP_HEADER@">
What it does
============

inStrain is python program for analysis of co-occurring genome populations from metagenomes that allows highly accurate genome comparisons, analysis of coverage, microdiversity, and linkage, and sensitive SNP detection with gene localization and synonymous non-synonymous identification. 

Read more about the tool: https://instrain.readthedocs.io/en/latest/
    </token>
    <xml name="citations">
        <citations>
            <citation type="doi">10.1101/2020.01.22.915579</citation>
        </citations>
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