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comparison test-data/integron_log @ 2:392f100eebcd draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/integron_finder commit bf94533e76d4253a734333e33c2f14f6634f0e79
author iuc
date Sun, 25 Feb 2024 16:08:08 +0000
parents 1ae00120dd24
children bfd290fe1588
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1:4768f7f8e93f 2:392f100eebcd
7 |___|_| |_|\__\___|\__, |_| \___/|_| |_| |_| |_|_| |_|\__,_|\___|_| 7 |___|_| |_|\__\___|\__, |_| \___/|_| |_| |_| |_|_| |_|\__,_|\___|_|
8 |___/ 8 |___/
9 9
10 ************************************************************************** 10 **************************************************************************
11 11
12 integron_finder version 2.0.2 12 integron_finder version 2.0.3
13 Using: 13 Using:
14 - Python 3.9.13 | packaged by conda-forge | (main, May 27 2022, 16:58:50) [GCC 10.3.0] 14 - Python 3.12.1 | packaged by conda-forge | (main, Dec 23 2023, 08:03:24) [GCC 12.3.0]
15 - numpy 1.19.4 15 - numpy 1.26.4
16 - pandas 1.1.5 16 - pandas 2.2.0
17 - matplolib 3.3.3 17 - matplolib 3.8.2
18 - biopython 1.78 18 - biopython 1.83
19 19
20 - Prodigal V2.6.3: February, 2016 20 - Prodigal V2.6.3: February, 2016
21 - INFERNAL 1.1.4 (Dec 2020) 21 - INFERNAL 1.1.4 (Dec 2020)
22 - HMMER 3.3.2 (Nov 2020); http://hmmer.org/ 22 - HMMER 3.3.2 (Nov 2020); http://hmmer.org/
23 23
52 along with this program (COPYING file). 52 along with this program (COPYING file).
53 If not, see <http://www.gnu.org/licenses/>. 53 If not, see <http://www.gnu.org/licenses/>.
54 54
55 ======================= 55 =======================
56 56
57 command used: integron_finder /tmp/tmp3_ir6t5a/files/7/8/a/dataset_78ad162b-8ddf-4d54-a7e8-be6ee3804d0a.dat --cpu 1 --keep-tmp -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40 57 command used: integron_finder /tmp/tmpx8hgxvv4/files/4/8/1/dataset_481be4e5-1005-4f8f-8196-c85c63664801.dat --cpu 1 --keep-tmp -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40
58 58
59 ======================= 59 =======================
60 60
61  61 
62 INFO : ############ Processing replicon ACBA.007.P01_13 (1/1) ############ 62 INFO : ############ Processing replicon ACBA.007.P01_13 (1/1) ############