Mercurial > repos > iuc > integron_finder

diff test-data/test3_integrons_table.tsv @ 3:bfd290fe1588 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/integron_finder commit cbb56e087d23446b8159622e2e4b7a709c8529ad
author iuc
date Fri, 14 Jun 2024 21:19:29 +0000
parents 392f100eebcd
children
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--- a/test-data/test3_integrons_table.tsv	Sun Feb 25 16:08:08 2024 +0000
+++ b/test-data/test3_integrons_table.tsv	Fri Jun 14 21:19:29 2024 +0000
@@ -1,4 +1,5 @@
-# cmd: integron_finder /tmp/tmpx8hgxvv4/files/8/7/c/dataset_87c30394-7ae6-4ec3-af50-dbfc9664d83d.dat --cpu 1 --keep-tmp --circ -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40
+# integron_finder 2.0.5 
+# cmd: integron_finder /tmp/tmphy8ici_1/files/0/1/8/dataset_0187fbc1-f208-45ff-ac2b-92c4e97c18eb.dat --cpu 1 --keep-tmp --circ -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40
 ID_integron	ID_replicon	element	pos_beg	pos_end	strand	evalue	type_elt	annotation	model	type	default	distance_2attC	considered_topology
 integron_01	ACBA.007.P01_13	ACBA.007.P01_13_1	55	1014	1	1.9e-25	protein	intI	intersection_tyr_intI	complete	Yes	NA	circ
 integron_01	ACBA.007.P01_13	ACBA.007.P01_13_20	17375	17722	-1	NA	protein	protein	NA	complete	Yes	NA	circ