Mercurial > repos > iuc > interval2maf

annotate test-data/interval2maf-in2.bed @ 1:b79f6002b176 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 95632be9aca24769ac192f2eb6a0454af21eff9e"
author iuc
date Tue, 10 Nov 2020 18:48:33 +0000
parents cfea1d6354db
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
1 chr22 17119390 17121127 XM_011546124.2_cds_1_0_chr22_17119391_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
2 chr22 17817310 17819129 NM_015241.3_cds_6_0_chr22_17817311_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
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3 chr22 18846931 18848320 XM_017029167.2_cds_0_0_chr22_18846932_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
4 chr22 18918315 18918491 NM_016335.5_cds_3_0_chr22_18918316_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
5 chr22 18918315 18918491 NM_001195226.2_cds_3_0_chr22_18918316_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
6 chr22 21030830 21031812 NM_004173.3_cds_3_0_chr22_21030831_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
7 chr22 21634684 21635644 NM_001331066.1_cds_3_0_chr22_21634685_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
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8 chr22 21634684 21635266 NM_152612.3_cds_3_0_chr22_21634685_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
9 chr22 22514001 22515630 NM_080740.5_cds_0_0_chr22_22514002_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
10 chr22 22646311 22646521 XM_005261818.2_cds_1_0_chr22_22646312_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
11 chr22 22646311 22646521 XM_005261815.3_cds_1_0_chr22_22646312_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
12 chr22 23394179 23394792 XM_017029168.1_cds_3_0_chr22_23394180_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
13 chr22 23394222 23394792 XM_017029169.1_cds_2_0_chr22_23394223_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
14 chr22 23573265 23573585 NM_001369906.1_cds_0_0_chr22_23573266_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
15 chr22 23573265 23573585 NM_020070.4_cds_0_0_chr22_23573266_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
16 chr22 26026444 26027678 XM_011530458.2_cds_43_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
17 chr22 26026444 26027678 XM_017029014.1_cds_43_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
18 chr22 26026444 26027678 XM_017029015.1_cds_42_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
19 chr22 26026444 26027678 XM_017029016.1_cds_31_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
20 chr22 26026444 26027678 XM_017029013.1_cds_43_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
21 chr22 26026444 26027678 NM_032608.7_cds_42_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
22 chr22 26026444 26027678 XM_017029012.1_cds_43_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
23 chr22 26026444 26027678 XM_011530465.2_cds_42_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
24 chr22 26026444 26027678 XM_011530464.2_cds_43_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
25 chr22 26026444 26027678 XM_011530461.2_cds_43_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
26 chr22 26026444 26027678 XM_011530460.2_cds_42_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
27 chr22 26026444 26027678 XM_011530459.2_cds_43_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
28 chr22 26026444 26027678 XM_017029017.1_cds_41_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
29 chr22 26026444 26027678 NM_001318245.2_cds_42_0_chr22_26026445_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
30 chr22 27796762 27800543 NM_002430.3_cds_1_0_chr22_27796763_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
31 chr22 27982220 27983851 XM_005261405.2_cds_0_0_chr22_27982221_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
32 chr22 27982220 27983851 NM_001145418.1_cds_0_0_chr22_27982221_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
33 chr22 29441541 29442122 NM_021026.2_cds_1_0_chr22_29441542_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
34 chr22 29488848 29490703 NM_021076.4_cds_3_0_chr22_29488849_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
35 chr22 31712082 31717291 NM_173566.3_cds_5_0_chr22_31712083_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
36 chr22 32190771 32191352 NM_001364983.1_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
37 chr22 32190771 32191352 XM_011529832.2_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
38 chr22 32190771 32191352 NM_001159545.2_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
39 chr22 32190771 32191352 XM_011529828.2_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
40 chr22 32190771 32191352 NM_001159546.2_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
41 chr22 32190771 32191352 NM_001364986.1_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
42 chr22 32190771 32191352 NM_001098527.3_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
43 chr22 32190771 32191352 XM_011529826.2_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
44 chr22 32190771 32191352 NM_001364985.1_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
45 chr22 32190771 32191352 NM_001364982.1_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
46 chr22 32190771 32191352 XM_011529827.3_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
47 chr22 32190771 32191352 NM_001364984.1_cds_0_0_chr22_32190772_r 0 -
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
48 chr22 32358071 32358444 NM_001098535.1_cds_0_0_chr22_32358072_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
49 chr22 32358153 32358611 XM_017028534.1_cds_1_0_chr22_32358154_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
50 chr22 32358158 32358444 NM_006604.2_cds_1_0_chr22_32358159_f 0 +
cfea1d6354db "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1db2b3ee758847b8b63f58fb2075961003ff8c22"
iuc
parents:
diff changeset
51 chr22 35726210 35727194 NM_030642.1_cds_2_0_chr22_35726211_f 0 +