Mercurial > repos > iuc > interval2maf
comparison test-data/interval2maf-out1.maf @ 3:7adddc6015c1 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit a59b05dd4a79b1b4e14ab1d78202c07a889ab023
author | iuc |
---|---|
date | Sat, 22 Apr 2023 20:08:40 +0000 |
parents | 1080e07a2233 |
children |
comparison
equal
deleted
inserted
replaced
2:1080e07a2233 | 3:7adddc6015c1 |
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664 i mm10.chr16 C 0 C 0 | 664 i mm10.chr16 C 0 C 0 |
665 | 665 |
666 a score=6521322.0 | 666 a score=6521322.0 |
667 s hg38.chr22 21635217 49 + 50818468 CTCCCCCTCCATGTCTAGTGC---CCAGGTGGCCACCAGATTCAAACTCAAG | 667 s hg38.chr22 21635217 49 + 50818468 CTCCCCCTCCATGTCTAGTGC---CCAGGTGGCCACCAGATTCAAACTCAAG |
668 s eulFla1.LGHW01001899v1 119076 49 + 262521 CTCCCCCTCCACGTCTAATGC---CCAGATCGCCACCAAATTCAGGCTCAAG | 668 s eulFla1.LGHW01001899v1 119076 49 + 262521 CTCCCCCTCCACGTCTAATGC---CCAGATCGCCACCAAATTCAGGCTCAAG |
669 i eulFla1.LGHW01001899v1 I 1 C 0 | |
669 s mm10.chr16 81066123 46 - 98207768 ------CTCCCCACCTAATGCAGTCCAGATGGCTACCAGATTCAGGCTCAAG | 670 s mm10.chr16 81066123 46 - 98207768 ------CTCCCCACCTAATGCAGTCCAGATGGCTACCAGATTCAGGCTCAAG |
671 i mm10.chr16 C 0 C 0 | |
670 | 672 |
671 a score=31953654.0 | 673 a score=31953654.0 |
672 s hg38.chr22 21634684 360 + 50818468 AAAGGCCTCAGTCAGTCCTGCTCCCAGAGGGACTCCCTGCTGTGGGATTCGCTGGGTAGCCAGACCAGCTTTCAGTGGACACAGGAGCAGCCCTTGTCCTGGTTCTCAGGGCTGCTGGGCTCAAGCTCTGGCGTGCCTGAAGCATCAGAGCCGAGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAGCCAGCTGGAGTCCCTCGACCTGCCTGGCTACTGTCCGCTCCGTGAGCCCCATCGCACGCTGAACTTCCTGGCTGACCACCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCC | 674 s hg38.chr22 21634684 360 + 50818468 AAAGGCCTCAGTCAGTCCTGCTCCCAGAGGGACTCCCTGCTGTGGGATTCGCTGGGTAGCCAGACCAGCTTTCAGTGGACACAGGAGCAGCCCTTGTCCTGGTTCTCAGGGCTGCTGGGCTCAAGCTCTGGCGTGCCTGAAGCATCAGAGCCGAGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAGCCAGCTGGAGTCCCTCGACCTGCCTGGCTACTGTCCGCTCCGTGAGCCCCATCGCACGCTGAACTTCCTGGCTGACCACCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCC |
673 s eulFla1.LGHW01001899v1 118501 357 + 262521 AAAGGCCTGAGTCAGTCCTGCTCCC---AGGACTCCCTGCTGTGGGACTCGCTGGGCAGCCAGACCAGCAGCCAGTGGACCCAGGAGCAGCCCCTGTCGTGGTTCTCAGGGCTGCTGGACTCAAGTTCAGGCACACCGGAAGCGTCAGTGCTGGGGCCTAGAGAGCGCGAGCTGATCTTCCTCAAGCCGGAGTTCAACAAGGACATCAAGTCGCTACTGAACCAGCCGACATCCTTCAACCCGCCTGGCTACTGTTCACTCCGGCAGCCCCATCGCACCCTGGACTTCCTGGCCAAGCACCACCTCTTCCCCGCCCTGCAGGGTGTGGTCAGCCAGGCTGTGGACAAGCTCAGTGGCGCC | 675 s eulFla1.LGHW01001899v1 118501 357 + 262521 AAAGGCCTGAGTCAGTCCTGCTCCC---AGGACTCCCTGCTGTGGGACTCGCTGGGCAGCCAGACCAGCAGCCAGTGGACCCAGGAGCAGCCCCTGTCGTGGTTCTCAGGGCTGCTGGACTCAAGTTCAGGCACACCGGAAGCGTCAGTGCTGGGGCCTAGAGAGCGCGAGCTGATCTTCCTCAAGCCGGAGTTCAACAAGGACATCAAGTCGCTACTGAACCAGCCGACATCCTTCAACCCGCCTGGCTACTGTTCACTCCGGCAGCCCCATCGCACCCTGGACTTCCTGGCCAAGCACCACCTCTTCCCCGCCCTGCAGGGTGTGGTCAGCCAGGCTGTGGACAAGCTCAGTGGCGCC |
674 i eulFla1.LGHW01001899v1 C 0 C 0 | 676 i eulFla1.LGHW01001899v1 C 0 C 0 |
931 i mm10.chr16 C 0 C 0 | 933 i mm10.chr16 C 0 C 0 |
932 | 934 |
933 a score=5438213.0 | 935 a score=5438213.0 |
934 s hg38.chr22 23394222 60 + 50818468 ATGGCGAGCATGGCAGTGAGCCCCCCACGCCCCACTCTGGGTCTGGAGACCAGCCCCCCA | 936 s hg38.chr22 23394222 60 + 50818468 ATGGCGAGCATGGCAGTGAGCCCCCCACGCCCCACTCTGGGTCTGGAGACCAGCCCCCCA |
935 s mm10.chr16 18219555 48 + 98207768 ATG------ATGGAGGTAAGTCCCC---ACCCCATTCCTGCT---GATTCCAGCGTCCCC | 937 s mm10.chr16 18219555 48 + 98207768 ATG------ATGGAGGTAAGTCCCC---ACCCCATTCCTGCT---GATTCCAGCGTCCCC |
938 i mm10.chr16 C 0 C 0 | |
936 | 939 |
937 a score=5438213.0 | 940 a score=5438213.0 |
938 s hg38.chr22 23394222 60 + 50818468 ATGGCGAGCATGGCAGTGAGCCCCCCACGCCCCACTCTGGGTCTGGAGACCAGCCCCCCA | 941 s hg38.chr22 23394222 60 + 50818468 ATGGCGAGCATGGCAGTGAGCCCCCCACGCCCCACTCTGGGTCTGGAGACCAGCCCCCCA |
939 s mm10.chr16 18219555 48 + 98207768 ATG------ATGGAGGTAAGTCCCC---ACCCCATTCCTGCT---GATTCCAGCGTCCCC | 942 s mm10.chr16 18219555 48 + 98207768 ATG------ATGGAGGTAAGTCCCC---ACCCCATTCCTGCT---GATTCCAGCGTCCCC |
940 i mm10.chr16 C 0 C 0 | 943 i mm10.chr16 C 0 C 0 |
2344 s hg38.chr22 35727139 55 + 50818468 TGTTCCAGCTCCCGGGGCAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAG | 2347 s hg38.chr22 35727139 55 + 50818468 TGTTCCAGCTCCCGGGGCAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAG |
2345 | 2348 |
2346 a score=799075.0 | 2349 a score=799075.0 |
2347 s hg38.chr22 35726271 16 + 50818468 TGATGAGGCTGGTATG | 2350 s hg38.chr22 35726271 16 + 50818468 TGATGAGGCTGGTATG |
2348 s eulFla1.LGHW01001967v1 331202 16 + 548553 TGAAGAGGCTAGCGTG | 2351 s eulFla1.LGHW01001967v1 331202 16 + 548553 TGAAGAGGCTAGCGTG |
2352 i eulFla1.LGHW01001967v1 C 0 C 0 | |
2349 | 2353 |
2350 a score=799075.0 | 2354 a score=799075.0 |
2351 s hg38.chr22 35726271 16 + 50818468 TGATGAGGCTGGTATG | 2355 s hg38.chr22 35726271 16 + 50818468 TGATGAGGCTGGTATG |
2352 s eulFla1.LGHW01001967v1 331202 16 + 548553 TGAAGAGGCTAGCGTG | 2356 s eulFla1.LGHW01001967v1 331202 16 + 548553 TGAAGAGGCTAGCGTG |
2353 i eulFla1.LGHW01001967v1 C 0 C 0 | 2357 i eulFla1.LGHW01001967v1 C 0 C 0 |
2593 | 2597 |
2594 a score=668337.0 | 2598 a score=668337.0 |
2595 s hg38.chr22 35727139 55 + 50818468 TGTTCCAGCTCCCGGGGCAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAG | 2599 s hg38.chr22 35727139 55 + 50818468 TGTTCCAGCTCCCGGGGCAGGGCTGTTCGAGGATCCCGTGTGGTTAAACCAGAAG |
2596 | 2600 |
2597 a score=799075.0 | 2601 a score=799075.0 |
2598 s hg38.chr22 35726284 3 + 50818468 ATG | 2602 s hg38.chr22 35726284 3 + 50818468 ATG |
2599 s eulFla1.LGHW01001967v1 331215 3 + 548553 GTG | 2603 s eulFla1.LGHW01001967v1 331215 3 + 548553 GTG |
2604 i eulFla1.LGHW01001967v1 C 0 C 0 | |
2600 | 2605 |
2601 a score=799075.0 | 2606 a score=799075.0 |
2602 s hg38.chr22 35726284 3 + 50818468 ATG | 2607 s hg38.chr22 35726284 3 + 50818468 ATG |
2603 s eulFla1.LGHW01001967v1 331215 3 + 548553 GTG | 2608 s eulFla1.LGHW01001967v1 331215 3 + 548553 GTG |
2609 i eulFla1.LGHW01001967v1 C 0 C 0 | |
2604 | 2610 |
2605 a score=799075.0 | 2611 a score=799075.0 |
2606 s hg38.chr22 35726284 3 + 50818468 ATG | 2612 s hg38.chr22 35726284 3 + 50818468 ATG |
2607 s eulFla1.LGHW01001967v1 331215 3 + 548553 GTG | 2613 s eulFla1.LGHW01001967v1 331215 3 + 548553 GTG |
2608 i eulFla1.LGHW01001967v1 C 0 C 0 | 2614 i eulFla1.LGHW01001967v1 C 0 C 0 |