Mercurial > repos > iuc > irissv
diff irissv.xml @ 1:1d4f065fa0ef draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tools/irissv/ commit e3ffd8ae7c25536658ff3ee76389f0c2a9894b4c"
author | iuc |
---|---|
date | Mon, 17 May 2021 17:29:39 +0000 |
parents | 30fc9f2bcbe4 |
children | b4b6b660293a |
line wrap: on
line diff
--- a/irissv.xml Tue Jan 19 20:30:21 2021 +0000 +++ b/irissv.xml Mon May 17 17:29:39 2021 +0000 @@ -1,5 +1,5 @@ <?xml version="1.0"?> -<tool id="irissv" name="Iris" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@"> +<tool id="irissv" name="Iris" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> <description>Refine insertion sequences</description> <macros> <import>macros.xml</import> @@ -12,7 +12,7 @@ @REF_FASTA@ iris - genome_in=reference.fa + genome_in=reference vcf_in='${in_vcf}' reads_in='${in_bam}' vcf_out='${out_vcf}' @@ -74,7 +74,7 @@ <test expect_num_outputs="1"> <conditional name="reference_source"> <param name="reference_source_selector" value="history"/> - <param name="ref_file" ftype="fasta" value="genome.fa"/> + <param name="ref_file" ftype="fasta.gz" value="genome.fa.gz"/> </conditional> <param name="in_vcf" value="sniffles.vcf"/> <param name="in_bam" value="iris.bam"/>