Mercurial > repos > iuc > isoformswitchanalyzer

view test-data/test06_consequences_summary.tabular @ 3:02a77166b29a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 44cb89c86b7a48993b6987a3a40129782fd7a093
author iuc
date Wed, 24 May 2023 13:33:53 +0000
parents f3fefb6d8254
children b3f292d9f35d
line wrap: on
line source

Comparison	featureCompared	switchConsequence	nrGenesWithConsequences	nrIsoWithConsequences
cancer vs health	Intron
retention	Intron retention gain	3	5
cancer vs health	Intron
retention	Intron retention loss	9	11
cancer vs health	Isoform seq
similarity	Length gain	11	17
cancer vs health	Isoform seq
similarity	Length loss	15	26
cancer vs health	NMD
status	NMD insensitive	1	3
cancer vs health	NMD
status	NMD sensitive	2	2
cancer vs health	Tss	Tss more downstream	19	30
cancer vs health	Tss	Tss more upstream	14	29
cancer vs health	Tts	Tts more downstream	6	13
cancer vs health	Tts	Tts more upstream	6	8
cancer vs health	ORF
genomic	Any consequence	0	0