Mercurial > repos > iuc > isoformswitchanalyzer

view test-data/test06_consequences_summary.tabular @ 1:2c4e879a81cf draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7d278967f9c8d2c6ce0a8f83be2c444822746bbf
author iuc
date Fri, 19 May 2023 21:26:00 +0000
parents f3fefb6d8254
children b3f292d9f35d
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Comparison	featureCompared	switchConsequence	nrGenesWithConsequences	nrIsoWithConsequences
cancer vs health	Intron
retention	Intron retention gain	3	5
cancer vs health	Intron
retention	Intron retention loss	9	11
cancer vs health	Isoform seq
similarity	Length gain	11	17
cancer vs health	Isoform seq
similarity	Length loss	15	26
cancer vs health	NMD
status	NMD insensitive	1	3
cancer vs health	NMD
status	NMD sensitive	2	2
cancer vs health	Tss	Tss more downstream	19	30
cancer vs health	Tss	Tss more upstream	14	29
cancer vs health	Tts	Tts more downstream	6	13
cancer vs health	Tts	Tts more upstream	6	8
cancer vs health	ORF
genomic	Any consequence	0	0