# HG changeset patch # User iuc # Date 1768383042 0 # Node ID d3377a16d881214f4c5888828aaa01711f3571c0 # Parent 298d81e5e138192a9e7ce74fda3a0421baf8fbc0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/isoformswitchanalyzer commit db7d80651213272678725ba877d95f5113378878 diff -r 298d81e5e138 -r d3377a16d881 IsoformSwitchAnalyzeR.R --- a/IsoformSwitchAnalyzeR.R Wed Dec 20 18:03:04 2023 +0000 +++ b/IsoformSwitchAnalyzeR.R Wed Jan 14 09:30:42 2026 +0000 @@ -1,7 +1,8 @@ # Load the IsoformSwitchAnalyzeR library library(IsoformSwitchAnalyzeR, - quietly = TRUE, - warn.conflicts = FALSE) + quietly = TRUE, + warn.conflicts = FALSE +) library(argparse, quietly = TRUE, warn.conflicts = FALSE) library(dplyr, quietly = TRUE, warn.conflicts = FALSE) library(ggplot2, quietly = TRUE, warn.conflicts = FALSE) @@ -9,11 +10,11 @@ # setup R error handling to go to stderr options( - show.error.messages = FALSE, - error = function() { - cat(geterrmessage(), file = stderr()) - q("no", 1, FALSE) - } + show.error.messages = FALSE, + error = function() { + cat(geterrmessage(), file = stderr()) + q("no", 1, FALSE) + } ) # we need that to not crash galaxy with an UTF8 error on German LC settings. @@ -28,319 +29,351 @@ parser <- ArgumentParser(description = "IsoformSwitcheR R script") parser$add_argument("--modeSelector") -parser$add_argument("--parentDir", required = FALSE, help = "Parent directory") +parser$add_argument("--parentDir", required = FALSE, help = "Parent directory") parser$add_argument("--condition", - action = "append", - required = FALSE, - help = "Conditions") + action = "append", + required = FALSE, + help = "Conditions" +) parser$add_argument("--sampleID", - action = "append", - required = FALSE, - help = "SampleID") + action = "append", + required = FALSE, + help = "SampleID" +) parser$add_argument("--replicate", - action = "append", - required = FALSE, - help = "Replicates") + action = "append", + required = FALSE, + help = "Replicates" +) +parser$add_argument("--cofactors", + action = "append", + required = FALSE, + help = "Cofactors (comma-separated values)" +) +parser$add_argument("--cofactorNames", + required = FALSE, + help = "Cofactor names (comma-separated)" +) parser$add_argument("--readLength", - required = FALSE, - type = "integer", - help = "Read length (required for stringtie)") + required = FALSE, + type = "integer", + help = "Read length (required for stringtie)" +) parser$add_argument("--pairedSamples", action = "store_true", required = FALSE, help = "Paired samples") parser$add_argument("--annotation", required = FALSE, help = "Annotation") parser$add_argument("--stringtieAnnotation", required = FALSE, help = "Stringtie annotation") parser$add_argument("--transcriptome", required = FALSE, help = "Transcriptome") parser$add_argument( - "--fixStringTieAnnotationProblem", - action = "store_true", - required = FALSE, - help = "Fix StringTie annotation problem" + "--fixStringTieAnnotationProblem", + action = "store_true", + required = FALSE, + help = "Fix StringTie annotation problem" ) parser$add_argument("--countFiles", required = FALSE, help = "Count files") parser$add_argument("--toolSource", required = FALSE, help = "Tool source") parser$add_argument("--rObject", required = FALSE, help = "R object") parser$add_argument("--IFcutoff", - required = FALSE, - type = "numeric", - help = "IFcutoff") -parser$add_argument( - "--geneExpressionCutoff", - required = FALSE, - type = "numeric", - help = "Gene expression cutoff" + required = FALSE, + type = "numeric", + help = "IFcutoff" ) parser$add_argument( - "--isoformExpressionCutoff", - required = FALSE, - type = "numeric", - help = "Isoform expression cutoff" + "--geneExpressionCutoff", + required = FALSE, + type = "numeric", + help = "Gene expression cutoff" +) +parser$add_argument( + "--isoformExpressionCutoff", + required = FALSE, + type = "numeric", + help = "Isoform expression cutoff" ) parser$add_argument("--alpha", - required = FALSE, - type = "numeric", - help = "") + required = FALSE, + type = "numeric", + help = "" +) parser$add_argument("--dIFcutoff", - required = FALSE, - type = "numeric", - help = "dIF cutoff") + required = FALSE, + type = "numeric", + help = "dIF cutoff" +) parser$add_argument( - "--onlySigIsoforms", - required = FALSE, - action = "store_true", - help = "Only significative isoforms" + "--onlySigIsoforms", + required = FALSE, + action = "store_true", + help = "Only significative isoforms" ) parser$add_argument( - "--filterForConsequences", - required = FALSE, - action = "store_true", - help = "Filter for consequences" + "--filterForConsequences", + required = FALSE, + action = "store_true", + help = "Filter for consequences" ) parser$add_argument( - "--removeSingleIsformGenes", - required = FALSE, - action = "store_true", - help = "Remove single isoform genes" + "--removeSingleIsformGenes", + required = FALSE, + action = "store_true", + help = "Remove single isoform genes" ) parser$add_argument( - "--keepIsoformInAllConditions", - required = FALSE, - action = "store_true", - help = "Keep isoform in all conditions" + "--keepIsoformInAllConditions", + required = FALSE, + action = "store_true", + help = "Keep isoform in all conditions" ) parser$add_argument( - "--correctForConfoundingFactors", - required = FALSE, - action = "store_true", - help = "Correct for confunding factors" + "--correctForConfoundingFactors", + required = FALSE, + action = "store_true", + help = "Correct for confunding factors" ) parser$add_argument( - "--overwriteIFvalues", - required = FALSE, - action = "store_true", - help = "Overwrite IF values" + "--overwriteIFvalues", + required = FALSE, + action = "store_true", + help = "Overwrite IF values" ) parser$add_argument( - "--removeNonConvensionalChr", - required = FALSE, - action = "store_true", - help = "Remove non-conventional chromosomes" + "--removeNonConvensionalChr", + required = FALSE, + action = "store_true", + help = "Remove non-conventional chromosomes" ) parser$add_argument( - "--reduceToSwitchingGenes", - required = FALSE, - action = "store_true", - help = "Reduce to switching genes" + "--reduceToSwitchingGenes", + required = FALSE, + action = "store_true", + help = "Reduce to switching genes" ) parser$add_argument( - "--reduceFurtherToGenesWithConsequencePotential", - required = FALSE, - action = "store_true", - help = "Reduce further to genes with consequence potential" + "--reduceFurtherToGenesWithConsequencePotential", + required = FALSE, + action = "store_true", + help = "Reduce further to genes with consequence potential" ) parser$add_argument( - "--keepIsoformInAllConditions2", - required = FALSE, - action = "store_true", - help = "Keep isoform in ll conditions" + "--keepIsoformInAllConditions2", + required = FALSE, + action = "store_true", + help = "Keep isoform in ll conditions" ) parser$add_argument("--minORFlength", - required = FALSE, - type = "integer", - help = "") + required = FALSE, + type = "integer", + help = "" +) parser$add_argument("--orfMethod", required = FALSE, help = "ORF methods") parser$add_argument("--PTCDistance", - required = FALSE, - type = "integer", - help = "") + required = FALSE, + type = "integer", + help = "" +) parser$add_argument( - "--removeShortAAseq", - required = FALSE, - action = "store_true", - help = "Remove short aminoacid sequences" + "--removeShortAAseq", + required = FALSE, + action = "store_true", + help = "Remove short aminoacid sequences" ) parser$add_argument( - "--removeLongAAseq", - required = FALSE, - action = "store_true", - help = "Remove long aminoacid sequences" + "--removeLongAAseq", + required = FALSE, + action = "store_true", + help = "Remove long aminoacid sequences" ) parser$add_argument( - "--removeORFwithStop", - required = FALSE, - action = "store_true", - help = "Remove ORF with stop codon" + "--removeORFwithStop", + required = FALSE, + action = "store_true", + help = "Remove ORF with stop codon" ) parser$add_argument( - "--onlySwitchingGenes", - required = FALSE, - action = "store_true", - help = "Only switching genes" + "--onlySwitchingGenes", + required = FALSE, + action = "store_true", + help = "Only switching genes" ) parser$add_argument("--analysisMode", required = FALSE, help = "Analyze all isoforms with differential usage or single genes") parser$add_argument( - "--genesToPlot", - type = "integer", - default = 10, - required = FALSE, - help = "Number of genes to plot" + "--genesToPlot", + type = "integer", + default = 10, + required = FALSE, + help = "Number of genes to plot" ) parser$add_argument("--gene", required = FALSE, help = "Gene ID to analyze") parser$add_argument( - "--sortByQvals", - action = "store_true", - required = FALSE, - help = "Sort genes by Q-val values" + "--sortByQvals", + action = "store_true", + required = FALSE, + help = "Sort genes by Q-val values" ) parser$add_argument("--countGenes", - action = "store_true", - required = FALSE, - help = "Count genes") + action = "store_true", + required = FALSE, + help = "Count genes" +) parser$add_argument( - "--asFractionTotal", - action = "store_true", - required = FALSE, - help = "Plot gene expresson as fraction of total" + "--asFractionTotal", + action = "store_true", + required = FALSE, + help = "Plot gene expresson as fraction of total" ) parser$add_argument("--plotGenes", - action = "store_true", - required = FALSE, - help = "Plot genes instead of isoforms") + action = "store_true", + required = FALSE, + help = "Plot genes instead of isoforms" +) parser$add_argument( - "--simplifyLocation", - action = "store_true", - required = FALSE, - help = "Simplify localtion" + "--simplifyLocation", + action = "store_true", + required = FALSE, + help = "Simplify localtion" ) parser$add_argument( - "--removeEmptyConsequences", - action = "store_true", - required = FALSE, - help = "Remove empty consequences" + "--removeEmptyConsequences", + action = "store_true", + required = FALSE, + help = "Remove empty consequences" ) parser$add_argument( - "--analysisOppositeConsequence", - action = "store_true", - required = FALSE, - help = "Analysi opposite consequences" + "--analysisOppositeConsequence", + action = "store_true", + required = FALSE, + help = "Analysi opposite consequences" ) parser$add_argument("--pathToCPATresultFile", - required = FALSE, - help = "Path to CPAT result file") + required = FALSE, + help = "Path to CPAT result file" +) parser$add_argument("--pathToCPC2resultFile", - required = FALSE, - help = "Path to CPC2 result file") + required = FALSE, + help = "Path to CPC2 result file" +) parser$add_argument("--pathToPFAMresultFile", - required = FALSE, - help = "Path to PFAM result file") + required = FALSE, + help = "Path to PFAM result file" +) parser$add_argument("--pathToNetSurfP2resultFile", - required = FALSE, - help = "Path to NetSurfP2 result file") + required = FALSE, + help = "Path to NetSurfP2 result file" +) parser$add_argument("--pathToSignalPresultFile", - required = FALSE, - help = "Path to signalP result file") + required = FALSE, + help = "Path to signalP result file" +) parser$add_argument("--pathToIUPred2AresultFile", - required = FALSE, - help = "Path to IUPred2A result file") + required = FALSE, + help = "Path to IUPred2A result file" +) parser$add_argument("--codingCutoff", - required = FALSE, - type = "numeric", - help = "Codding cutoff") -parser$add_argument( - "--removeNoncodingORFs", - action = "store_true", - required = FALSE, - help = "Remove non-coding ORFs" + required = FALSE, + type = "numeric", + help = "Codding cutoff" ) parser$add_argument( - "--minSignalPeptideProbability", - required = FALSE, - type = "numeric", - help = "Minimul signal peptide probability" + "--removeNoncodingORFs", + action = "store_true", + required = FALSE, + help = "Remove non-coding ORFs" ) parser$add_argument( - "--smoothingWindowSize", - type = "integer", - required = FALSE, - help = "Smoothing windows size" + "--minSignalPeptideProbability", + required = FALSE, + type = "numeric", + help = "Minimul signal peptide probability" ) parser$add_argument( - "--probabilityCutoff", - required = FALSE, - type = "double", - help = "Probability cutoff" + "--smoothingWindowSize", + type = "integer", + required = FALSE, + help = "Smoothing windows size" +) +parser$add_argument( + "--probabilityCutoff", + required = FALSE, + type = "double", + help = "Probability cutoff" ) parser$add_argument("--minIdrSize", - required = FALSE, - type = "integer", - help = "Min Idr size") + required = FALSE, + type = "integer", + help = "Min Idr size" +) parser$add_argument( - "--annotateBindingSites", - action = "store_true", - required = FALSE, - help = "Annotate binding sites" + "--annotateBindingSites", + action = "store_true", + required = FALSE, + help = "Annotate binding sites" ) parser$add_argument( - "--minIdrBindingSize", - required = FALSE, - type = "integer", - help = "Minimun Idr binding size" + "--minIdrBindingSize", + required = FALSE, + type = "integer", + help = "Minimun Idr binding size" ) parser$add_argument( - "--minIdrBindingOverlapFrac", - required = FALSE, - type = "numeric", - help = "" + "--minIdrBindingOverlapFrac", + required = FALSE, + type = "numeric", + help = "" ) parser$add_argument("--ntCutoff", - required = FALSE, - type = "integer", - help = "Nucleotide cutoff") + required = FALSE, + type = "integer", + help = "Nucleotide cutoff" +) parser$add_argument("--ntFracCutoff", - required = FALSE, - type = "numeric", - help = "Nucleotide fraction cutoff") + required = FALSE, + type = "numeric", + help = "Nucleotide fraction cutoff" +) parser$add_argument( - "--ntJCsimCutoff", - required = FALSE, - type = "numeric", - help = "Nucleotide Jaccard simmilarity cutoff" + "--ntJCsimCutoff", + required = FALSE, + type = "numeric", + help = "Nucleotide Jaccard simmilarity cutoff" ) parser$add_argument("--AaCutoff", - required = FALSE, - type = "integer", - help = "Aminoacid cutoff") + required = FALSE, + type = "integer", + help = "Aminoacid cutoff" +) parser$add_argument("--AaFracCutoff", - required = FALSE, - type = "numeric", - help = "Aminoacid fraction cutoff") + required = FALSE, + type = "numeric", + help = "Aminoacid fraction cutoff" +) parser$add_argument( - "--AaJCsimCutoff", - required = FALSE, - type = "numeric", - help = "Aminoacid Jaccard similarity cutoff" + "--AaJCsimCutoff", + required = FALSE, + type = "numeric", + help = "Aminoacid Jaccard similarity cutoff" ) parser$add_argument( - "--removeNonConseqSwitches", - action = "store_true", - required = FALSE, - help = "Remove switches without consequences" + "--removeNonConseqSwitches", + action = "store_true", + required = FALSE, + help = "Remove switches without consequences" ) parser$add_argument( - "--rescaleTranscripts", - action = "store_true", - required = FALSE, - help = "Rescale transcripts" + "--rescaleTranscripts", + action = "store_true", + required = FALSE, + help = "Rescale transcripts" ) parser$add_argument( - "--reverseMinus", - action = "store_true", - required = FALSE, - help = "Reverse minus" + "--reverseMinus", + action = "store_true", + required = FALSE, + help = "Reverse minus" ) parser$add_argument( - "--addErrorbars", - action = "store_true", - required = FALSE, - help = "Add error bars" + "--addErrorbars", + action = "store_true", + required = FALSE, + help = "Add error bars" ) @@ -350,661 +383,706 @@ ################### if (args$modeSelector == "data_import") { - - quantificationData <- importIsoformExpression( - parentDir = args$parentDir, - addIsofomIdAsColumn = TRUE, - readLength = args$readLength - ) + quantificationData <- importIsoformExpression( + parentDir = args$parentDir, + addIsofomIdAsColumn = TRUE, + readLength = args$readLength + ) - if (!args$pairedSamples) { - ### Make design matrix - myDesign <- data.frame( - sampleID = args$sampleID, - condition = args$condition) - } else { - myDesign <- data.frame( - sampleID = args$sampleID, - condition = args$condition, - replicate = args$replicate) - } + if (!args$pairedSamples) { + ### Make design matrix + if (!is.null(args$cofactors)) { + # Split comma-separated cofactor values for each sample + cofactor_list <- lapply(args$cofactors, function(x) { + strsplit(x, ",")[[1]] + }) - comparisons <- as.data.frame(cbind( - condition_1 = myDesign$condition[1], - condition_2 = myDesign$condition[length(myDesign$condition)] - )) + cofactor_names <- strsplit(as.character(args$cofactorNames), ",")[[1]] + + # Create design matrix with cofactors as additional columns + myDesign <- data.frame( + sampleID = args$sampleID, + condition = args$condition + ) - if (args$toolSource == "stringtie") { - if (!is.null(args$stringtieAnnotation)) { - SwitchList <- importRdata( - isoformCountMatrix = quantificationData$counts, - isoformRepExpression = quantificationData$abundance, - designMatrix = myDesign, - removeNonConvensionalChr = args$removeNonConvensionalChr, - isoformExonAnnoation = args$stringtieAnnotation, - isoformNtFasta = args$transcriptome, - addAnnotatedORFs = FALSE, - showProgress = TRUE, - comparisonsToMake = comparisons, - fixStringTieAnnotationProblem = args$fixStringTieAnnotationProblem - ) + # Add cofactor columns with actual names + for (i in seq_along(cofactor_names)) { + cofactor_col <- sapply(cofactor_list, function(x) x[i]) + myDesign[[cofactor_names[i]]] <- cofactor_col + } + } else { + myDesign <- data.frame( + sampleID = args$sampleID, + condition = args$condition + ) + } + } else { + if (!is.null(args$cofactors)) { + # Split comma-separated cofactor values for each sample + cofactor_list <- lapply(args$cofactors, function(x) { + strsplit(x, ",")[[1]] + }) + + cofactor_names <- strsplit(as.character(args$cofactorNames), ",")[[1]] - SwitchList <- addORFfromGTF( - SwitchList, - removeNonConvensionalChr = args$removeNonConvensionalChr, - pathToGTF = args$annotation - ) + # Create design matrix with cofactors as additional columns + myDesign <- data.frame( + sampleID = args$sampleID, + condition = args$condition, + replicate = args$replicate + ) - } else { - SwitchList <- importRdata( - isoformCountMatrix = quantificationData$counts, - isoformRepExpression = quantificationData$abundance, - designMatrix = myDesign, - removeNonConvensionalChr = args$removeNonConvensionalChr, - isoformNtFasta = args$transcriptome, - isoformExonAnnoation = args$annotation, - showProgress = TRUE, - comparisonsToMake = comparisons, - fixStringTieAnnotationProblem = args$fixStringTieAnnotationProblem - ) + # Add cofactor columns with actual names + for (i in seq_along(cofactor_names)) { + cofactor_col <- sapply(cofactor_list, function(x) x[i]) + myDesign[[cofactor_names[i]]] <- cofactor_col + } + } else { + myDesign <- data.frame( + sampleID = args$sampleID, + condition = args$condition, + replicate = args$replicate + ) + } } - } else { - SwitchList <- importRdata( - isoformCountMatrix = quantificationData$counts, - isoformRepExpression = quantificationData$abundance, - designMatrix = myDesign, - removeNonConvensionalChr = args$removeNonConvensionalChr, - isoformExonAnnoation = args$annotation, - isoformNtFasta = args$transcriptome, - showProgress = TRUE, - comparisonsToMake = comparisons - ) - } + comparisons <- as.data.frame(cbind( + condition_1 = myDesign$condition[1], + condition_2 = myDesign$condition[length(myDesign$condition)] + )) + + if (args$toolSource == "stringtie") { + if (!is.null(args$stringtieAnnotation)) { + SwitchList <- importRdata( + isoformCountMatrix = quantificationData$counts, + isoformRepExpression = quantificationData$abundance, + designMatrix = myDesign, + removeNonConvensionalChr = args$removeNonConvensionalChr, + isoformExonAnnoation = args$stringtieAnnotation, + isoformNtFasta = args$transcriptome, + addAnnotatedORFs = FALSE, + showProgress = TRUE, + comparisonsToMake = comparisons, + fixStringTieAnnotationProblem = args$fixStringTieAnnotationProblem + ) - geneCountMatrix <- extractGeneExpression( - SwitchList, - extractCounts = TRUE, - addGeneNames = FALSE, - addIdsAsColumns = FALSE - ) - - if (args$countFiles == "collection") { - - expressionDF <- data.frame(geneCountMatrix) + SwitchList <- addORFfromGTF( + SwitchList, + removeNonConvensionalChr = args$removeNonConvensionalChr, + pathToGTF = args$annotation + ) + } else { + SwitchList <- importRdata( + isoformCountMatrix = quantificationData$counts, + isoformRepExpression = quantificationData$abundance, + designMatrix = myDesign, + removeNonConvensionalChr = args$removeNonConvensionalChr, + isoformNtFasta = args$transcriptome, + isoformExonAnnoation = args$annotation, + showProgress = TRUE, + comparisonsToMake = comparisons, + fixStringTieAnnotationProblem = args$fixStringTieAnnotationProblem + ) + } + } else { + SwitchList <- importRdata( + isoformCountMatrix = quantificationData$counts, + isoformRepExpression = quantificationData$abundance, + designMatrix = myDesign, + removeNonConvensionalChr = args$removeNonConvensionalChr, + isoformExonAnnoation = args$annotation, + isoformNtFasta = args$transcriptome, + showProgress = TRUE, + comparisonsToMake = comparisons + ) + } - myDesign$condition[length(myDesign$condition)] - - dataframe_factor1 <- expressionDF %>% select(matches(myDesign$condition[1])) - dataframe_factor2 <- expressionDF %>% select(matches(myDesign$condition[length(myDesign$condition)])) - + geneCountMatrix <- extractGeneExpression( + SwitchList, + extractCounts = TRUE, + addGeneNames = FALSE, + addIdsAsColumns = FALSE + ) - lf1 <- as.list(as.data.frame(dataframe_factor1)) - sampleNames1 <- colnames(as.data.frame(dataframe_factor1)) + if (args$countFiles == "collection") { + expressionDF <- data.frame(geneCountMatrix) - lf2 <- as.list(as.data.frame(dataframe_factor2)) - sampleNames2 <- colnames(as.data.frame(dataframe_factor2)) + myDesign$condition[length(myDesign$condition)] - geneNames <- row.names(as.data.frame(expressionDF)) + dataframe_factor1 <- expressionDF %>% select(matches(myDesign$condition[1])) + dataframe_factor2 <- expressionDF %>% select(matches(myDesign$condition[length(myDesign$condition)])) - for (index in seq_along(lf1)) { - tabular_expression <- data.frame(geneNames, lf1[index]) - colnames(tabular_expression) <- - c("Geneid", sampleNames1[index]) - filename <- - paste(sampleNames1[index], "dataset.tabular", sep = "_") - output_path <- paste("./count_files/factor1/", filename, sep = "") - write.table( - tabular_expression, - output_path, - sep = "\t", - row.names = FALSE, - quote = FALSE - ) + lf1 <- as.list(as.data.frame(dataframe_factor1)) + sampleNames1 <- colnames(as.data.frame(dataframe_factor1)) + + lf2 <- as.list(as.data.frame(dataframe_factor2)) + sampleNames2 <- colnames(as.data.frame(dataframe_factor2)) + + geneNames <- row.names(as.data.frame(expressionDF)) + + + for (index in seq_along(lf1)) { + tabular_expression <- data.frame(geneNames, lf1[index]) + colnames(tabular_expression) <- + c("Geneid", sampleNames1[index]) + filename <- + paste(sampleNames1[index], "dataset.tabular", sep = "_") + output_path <- paste("./count_files/factor1/", filename, sep = "") + write.table( + tabular_expression, + output_path, + sep = "\t", + row.names = FALSE, + quote = FALSE + ) + } + for (index in seq_along(lf2)) { + tabular_expression <- data.frame(geneNames, lf2[index]) + colnames(tabular_expression) <- + c("Geneid", sampleNames2[index]) + filename <- + paste(sampleNames2[index], "dataset.tabular", sep = "_") + output_path <- paste("./count_files/factor2/", filename, sep = "") + write.table( + tabular_expression, + output_path, + sep = "\t", + row.names = FALSE, + quote = FALSE + ) + } + } else if (args$countFiles == "matrix") { + expressionDF <- data.frame(geneCountMatrix) + geneNames <- row.names(expressionDF) + + expressionDF <- cbind(geneNames, expressionDF) + write.table( + as.data.frame(expressionDF), + "./count_files/matrix.tabular", + sep = "\t", + row.names = FALSE, + quote = FALSE + ) + write.table( + as.data.frame(myDesign), + "./count_files/samples.tabular", + sep = "\t", + row.names = FALSE, + quote = FALSE + ) } - for (index in seq_along(lf2)) { - tabular_expression <- data.frame(geneNames, lf2[index]) - colnames(tabular_expression) <- - c("Geneid", sampleNames2[index]) - filename <- - paste(sampleNames2[index], "dataset.tabular", sep = "_") - output_path <- paste("./count_files/factor2/", filename, sep = "") - write.table( - tabular_expression, - output_path, - sep = "\t", - row.names = FALSE, - quote = FALSE - ) - } - } else if (args$countFiles == "matrix") { - expressionDF <- data.frame(geneCountMatrix) - geneNames <- row.names(expressionDF) - expressionDF <- cbind(geneNames, expressionDF) - write.table( - as.data.frame(expressionDF), - "./count_files/matrix.tabular", - sep = "\t", - row.names = FALSE, - quote = FALSE - ) - write.table( - as.data.frame(myDesign), - "./count_files/samples.tabular", - sep = "\t", - row.names = FALSE, - quote = FALSE - ) - } - - save(SwitchList, file = "SwitchList.Rda") - + save(SwitchList, file = "SwitchList.Rda") } if (args$modeSelector == "first_step") { + # First part of the analysis + ############################# - # First part of the analysis - ############################# - - load(file = args$rObject) + load(file = args$rObject) - ### Filter - SwitchList <- preFilter( - SwitchList, - IFcutoff = args$IFcutoff, - geneExpressionCutoff = args$geneExpressionCutoff, - isoformExpressionCutoff = args$isoformExpressionCutoff, - removeSingleIsoformGenes = args$removeSingleIsformGenes, - onlySigIsoforms = args$onlySigIsoforms, - keepIsoformInAllConditions = args$keepIsoformInAllConditions, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - ) + ### Filter + SwitchList <- preFilter( + SwitchList, + IFcutoff = args$IFcutoff, + geneExpressionCutoff = args$geneExpressionCutoff, + isoformExpressionCutoff = args$isoformExpressionCutoff, + removeSingleIsoformGenes = args$removeSingleIsformGenes, + onlySigIsoforms = args$onlySigIsoforms, + keepIsoformInAllConditions = args$keepIsoformInAllConditions, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + ) - ### Test for isoform switches - SwitchList <- isoformSwitchTestDEXSeq( - SwitchList, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - correctForConfoundingFactors = args$correctForConfoundingFactors, - overwriteIFvalues = args$overwriteIFvalues, - reduceToSwitchingGenes = args$reduceToSwitchingGenes, - reduceFurtherToGenesWithConsequencePotential = args$reduceFurtherToGenesWithConsequencePotential, - onlySigIsoforms = args$onlySigIsoforms, - keepIsoformInAllConditions = args$keepIsoformInAllConditions2, - showProgress = TRUE, - ) + ### Test for isoform switches + SwitchList <- isoformSwitchTestDEXSeq( + SwitchList, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + correctForConfoundingFactors = args$correctForConfoundingFactors, + overwriteIFvalues = args$overwriteIFvalues, + reduceToSwitchingGenes = args$reduceToSwitchingGenes, + reduceFurtherToGenesWithConsequencePotential = args$reduceFurtherToGenesWithConsequencePotential, + onlySigIsoforms = args$onlySigIsoforms, + keepIsoformInAllConditions = args$keepIsoformInAllConditions2, + showProgress = TRUE, + ) - # Analyze missing annotated isoforms by default - SwitchList <- analyzeNovelIsoformORF( - SwitchList, - analysisAllIsoformsWithoutORF = TRUE, - minORFlength = args$minORFlength, - orfMethod = args$orfMethod, - PTCDistance = args$PTCDistance, - startCodons = "ATG", - stopCodons = c("TAA", "TAG", "TGA"), - showProgress = TRUE, - ) + # Analyze missing annotated isoforms by default + SwitchList <- analyzeNovelIsoformORF( + SwitchList, + analysisAllIsoformsWithoutORF = TRUE, + minORFlength = args$minORFlength, + orfMethod = args$orfMethod, + PTCDistance = args$PTCDistance, + startCodons = "ATG", + stopCodons = c("TAA", "TAG", "TGA"), + showProgress = TRUE, + ) - ### Extract Sequences - SwitchList <- extractSequence( - SwitchList, - onlySwitchingGenes = args$onlySwitchingGenes, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - extractNTseq = TRUE, - extractAAseq = TRUE, - removeShortAAseq = args$removeShortAAseq, - removeLongAAseq = args$removeLongAAseq, - removeORFwithStop = args$removeORFwithStop, - addToSwitchAnalyzeRlist = TRUE, - writeToFile = TRUE, - pathToOutput = getwd(), - outputPrefix = "isoformSwitchAnalyzeR_isoform", - forceReExtraction = FALSE, - quiet = FALSE - ) + ### Extract Sequences + SwitchList <- extractSequence( + SwitchList, + onlySwitchingGenes = args$onlySwitchingGenes, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + extractNTseq = TRUE, + extractAAseq = TRUE, + removeShortAAseq = args$removeShortAAseq, + removeLongAAseq = args$removeLongAAseq, + removeORFwithStop = args$removeORFwithStop, + addToSwitchAnalyzeRlist = TRUE, + writeToFile = TRUE, + pathToOutput = getwd(), + outputPrefix = "isoformSwitchAnalyzeR_isoform", + forceReExtraction = FALSE, + quiet = FALSE + ) - ### Summary - switchSummary <- extractSwitchSummary( - SwitchList, - filterForConsequences = args$filterForConsequences, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - onlySigIsoforms = args$onlySigIsoforms, - ) + ### Summary + switchSummary <- extractSwitchSummary( + SwitchList, + filterForConsequences = args$filterForConsequences, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + onlySigIsoforms = args$onlySigIsoforms, + ) - save(SwitchList, file = "SwitchList.Rda") - write.table( - switchSummary, - file = "switchSummary.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) - + save(SwitchList, file = "SwitchList.Rda") + write.table( + switchSummary, + file = "switchSummary.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) } if (args$modeSelector == "second_step") { - - # Second part of the analysis - ############################# - - load(file = args$rObject) + # Second part of the analysis + ############################# - ### Add annotation - if (!is.null(args$pathToCPATresultFile)) { - SwitchList <- analyzeCPAT( - SwitchList, - pathToCPATresultFile = args$pathToCPATresultFile, - codingCutoff = args$codingCutoff, - removeNoncodinORFs = args$removeNoncodingORFs - ) - } + load(file = args$rObject) - if (!is.null(args$pathToCPC2resultFile)) { - SwitchList <- analyzeCPC2( - SwitchList, - pathToCPC2resultFile = args$pathToCPC2resultFile, - removeNoncodinORFs = args$removeNoncodingORFs - ) - } - - if (!is.null(args$pathToPFAMresultFile)) { - pfamFiles <- list.files(path = args$pathToPFAMresultFile, - full.names = TRUE) - - SwitchList <- analyzePFAM(SwitchList, - pathToPFAMresultFile = pfamFiles, - showProgress = FALSE) - } + ### Add annotation + if (!is.null(args$pathToCPATresultFile)) { + SwitchList <- analyzeCPAT( + SwitchList, + pathToCPATresultFile = args$pathToCPATresultFile, + codingCutoff = args$codingCutoff, + removeNoncodinORFs = args$removeNoncodingORFs + ) + } - if (!is.null(args$pathToNetSurfP2resultFile)) { - netsurfFiles <- list.files(path = args$pathToNetSurfP2resultFile, - full.names = TRUE) - - SwitchList <- analyzeNetSurfP2( - SwitchList, - pathToNetSurfP2resultFile = netsurfFiles, - smoothingWindowSize = args$smoothingWindowSize, - probabilityCutoff = args$probabilityCutoff, - minIdrSize = args$minIdrSize, - showProgress = TRUE - ) - } + if (!is.null(args$pathToCPC2resultFile)) { + SwitchList <- analyzeCPC2( + SwitchList, + pathToCPC2resultFile = args$pathToCPC2resultFile, + removeNoncodinORFs = args$removeNoncodingORFs + ) + } - if (!is.null(args$pathToIUPred2AresultFile)) { - SwitchList <- analyzeIUPred2A( - SwitchList, - pathToIUPred2AresultFile = args$pathToIUPred2AresultFile, - smoothingWindowSize = args$smoothingWindowSize, - probabilityCutoff = args$probabilityCutoff, - minIdrSize = args$minIdrSize, - annotateBindingSites = args$annotateBindingSites, - minIdrBindingSize = args$minIdrBindingSize, - minIdrBindingOverlapFrac = args$minIdrBindingOverlapFrac, - showProgress = TRUE, - quiet = FALSE - ) - } + if (!is.null(args$pathToPFAMresultFile)) { + pfamFiles <- list.files( + path = args$pathToPFAMresultFile, + full.names = TRUE + ) - if (!is.null(args$pathToSignalPresultFile)) { - signalpFiles <- list.files(path = args$pathToSignalPresultFile, - full.names = TRUE) + SwitchList <- analyzePFAM(SwitchList, + pathToPFAMresultFile = pfamFiles, + showProgress = FALSE + ) + } - SwitchList <- analyzeSignalP( - SwitchList, - pathToSignalPresultFile = signalpFiles, - minSignalPeptideProbability = args$minSignalPeptideProbability - ) - } + if (!is.null(args$pathToNetSurfP2resultFile)) { + netsurfFiles <- list.files( + path = args$pathToNetSurfP2resultFile, + full.names = TRUE + ) - SwitchList <- analyzeAlternativeSplicing( - SwitchList, - onlySwitchingGenes = args$onlySwitchingGenes, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - showProgress = TRUE - ) - - SwitchList <- analyzeIntronRetention( - SwitchList, - onlySwitchingGenes = args$onlySwitchingGenes, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - showProgress = TRUE - ) - - consequences <- c( - "intron_retention", - "NMD_status", - "isoform_seq_similarity", - "ORF_genomic", - "tss", - "tts" - ) - - if (!is.null(args$pathToCPATresultFile) || - !is.null(args$pathToCPC2resultFile)) { - updatedConsequences <- c(consequences, "coding_potential") - consequences <- updatedConsequences - } - - if (!is.null(args$pathToPFAMresultFile)) { - updatedConsequences <- c(consequences, "domains_identified") - consequences <- updatedConsequences - } + SwitchList <- analyzeNetSurfP2( + SwitchList, + pathToNetSurfP2resultFile = netsurfFiles, + smoothingWindowSize = args$smoothingWindowSize, + probabilityCutoff = args$probabilityCutoff, + minIdrSize = args$minIdrSize, + showProgress = TRUE + ) + } - if (!is.null(args$pathToSignalPresultFile)) { - updatedConsequences <- c(consequences, "signal_peptide_identified") - consequences <- updatedConsequences - } - - if (!is.null(args$pathToNetSurfP2resultFile) || - !is.null(args$pathToIUPred2AresultFile)) { - updatedConsequences <- c(consequences, "IDR_identified", "IDR_type") - consequences <- updatedConsequences - } + if (!is.null(args$pathToIUPred2AresultFile)) { + SwitchList <- analyzeIUPred2A( + SwitchList, + pathToIUPred2AresultFile = args$pathToIUPred2AresultFile, + smoothingWindowSize = args$smoothingWindowSize, + probabilityCutoff = args$probabilityCutoff, + minIdrSize = args$minIdrSize, + annotateBindingSites = args$annotateBindingSites, + minIdrBindingSize = args$minIdrBindingSize, + minIdrBindingOverlapFrac = args$minIdrBindingOverlapFrac, + showProgress = TRUE, + quiet = FALSE + ) + } - SwitchList <- analyzeSwitchConsequences( - SwitchList, - consequencesToAnalyze = consequences, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - onlySigIsoforms = args$onlySigIsoforms, - ntCutoff = args$ntCutoff, - ntJCsimCutoff = args$ntJCsimCutoff, - AaCutoff = args$AaCutoff, - AaFracCutoff = args$AaFracCutoff, - AaJCsimCutoff = args$AaJCsimCutoff, - removeNonConseqSwitches = args$removeNonConseqSwitches, - showProgress = TRUE - ) + if (!is.null(args$pathToSignalPresultFile)) { + signalpFiles <- list.files( + path = args$pathToSignalPresultFile, + full.names = TRUE + ) - - ### Visual analysis - # Top genes - - if (args$analysisMode == "single") { + SwitchList <- analyzeSignalP( + SwitchList, + pathToSignalPresultFile = signalpFiles, + minSignalPeptideProbability = args$minSignalPeptideProbability + ) + } - outputFile <- file.path(getwd(), "single_gene.pdf") - - pdf( - file = outputFile, - onefile = FALSE, - height = 6, - width = 9 + SwitchList <- analyzeAlternativeSplicing( + SwitchList, + onlySwitchingGenes = args$onlySwitchingGenes, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + showProgress = TRUE ) - switchPlot( - SwitchList, - gene = args$gene, - condition1 = myDesign$condition[1], - condition2 = myDesign$condition[length(myDesign$condition)], - IFcutoff = args$IFcutoff, - dIFcutoff = args$dIFcutoff, - rescaleTranscripts = args$rescaleTranscripts, - reverseMinus = args$reverseMinus, - addErrorbars = args$addErrorbars, - logYaxis = FALSE, - localTheme = theme_bw(base_size = 8) - ) - dev.off() - - } else { - mostSwitchingGene <- - extractTopSwitches( + SwitchList <- analyzeIntronRetention( SwitchList, - n = Inf, - filterForConsequences = args$filterForConsequences, - extractGenes = TRUE, + onlySwitchingGenes = args$onlySwitchingGenes, alpha = args$alpha, dIFcutoff = args$dIFcutoff, - inEachComparison = FALSE, - sortByQvals = args$sortByQvals - ) + showProgress = TRUE + ) + + consequences <- c( + "intron_retention", + "NMD_status", + "isoform_seq_similarity", + "ORF_genomic", + "tss", + "tts" + ) + + if (!is.null(args$pathToCPATresultFile) || + !is.null(args$pathToCPC2resultFile)) { + updatedConsequences <- c(consequences, "coding_potential") + consequences <- updatedConsequences + } + + if (!is.null(args$pathToPFAMresultFile)) { + updatedConsequences <- c(consequences, "domains_identified") + consequences <- updatedConsequences + } - write.table( - mostSwitchingGene, - file = "mostSwitchingGene.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE + if (!is.null(args$pathToSignalPresultFile)) { + updatedConsequences <- c(consequences, "signal_peptide_identified") + consequences <- updatedConsequences + } + + if (!is.null(args$pathToNetSurfP2resultFile) || + !is.null(args$pathToIUPred2AresultFile)) { + updatedConsequences <- c(consequences, "IDR_identified", "IDR_type") + consequences <- updatedConsequences + } + + SwitchList <- analyzeSwitchConsequences( + SwitchList, + consequencesToAnalyze = consequences, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + onlySigIsoforms = args$onlySigIsoforms, + ntCutoff = args$ntCutoff, + ntJCsimCutoff = args$ntJCsimCutoff, + AaCutoff = args$AaCutoff, + AaFracCutoff = args$AaFracCutoff, + AaJCsimCutoff = args$AaJCsimCutoff, + removeNonConseqSwitches = args$removeNonConseqSwitches, + showProgress = TRUE ) - switchPlotTopSwitches( - SwitchList, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - onlySigIsoforms = args$onlySigIsoforms, - n = args$genesToPlot, - sortByQvals = args$sortByQvals, - pathToOutput = getwd(), - fileType = "pdf" - ) + ### Visual analysis + # Top genes + + if (args$analysisMode == "single") { + outputFile <- file.path(getwd(), "single_gene.pdf") - outputFile <- - file.path(getwd(), "extractConsequencesSummary.pdf") - - pdf( - file = outputFile, - onefile = FALSE, - height = 6, - width = 12 - ) + pdf( + file = outputFile, + onefile = FALSE, + height = 6, + width = 9 + ) - consequenceSummary <- extractConsequenceSummary( - SwitchList, - consequencesToAnalyze = "all", - includeCombined = FALSE, - asFractionTotal = args$asFractionTotal, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - plot = TRUE, - plotGenes = args$plotGenes, - simplifyLocation = args$simplifyLocation, - removeEmptyConsequences = args$removeEmptyConsequences, - returnResult = TRUE, - localTheme = theme_bw() - ) - dev.off() + switchPlot( + SwitchList, + gene = args$gene, + condition1 = myDesign$condition[1], + condition2 = myDesign$condition[length(myDesign$condition)], + IFcutoff = args$IFcutoff, + dIFcutoff = args$dIFcutoff, + rescaleTranscripts = args$rescaleTranscripts, + reverseMinus = args$reverseMinus, + addErrorbars = args$addErrorbars, + logYaxis = FALSE, + localTheme = theme_bw(base_size = 8) + ) + dev.off() + } else { + mostSwitchingGene <- + extractTopSwitches( + SwitchList, + n = Inf, + filterForConsequences = args$filterForConsequences, + extractGenes = TRUE, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + inEachComparison = FALSE, + sortByQvals = args$sortByQvals + ) - write.table( - consequenceSummary, - file = "consequencesSummary.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) + write.table( + mostSwitchingGene, + file = "mostSwitchingGene.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) - outputFile <- file.path(getwd(), "consequencesEnrichment.pdf") - pdf( - file = outputFile, - onefile = FALSE, - height = 6, - width = 9 - ) - consequenceEnrichment <- extractConsequenceEnrichment( - SwitchList, - consequencesToAnalyze = "all", - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - countGenes = args$countGenes, - analysisOppositeConsequence = args$analysisOppositeConsequence, - plot = TRUE, - localTheme = theme_bw(base_size = 12), - minEventsForPlotting = 10, - returnResult = TRUE - ) - dev.off() + switchPlotTopSwitches( + SwitchList, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + onlySigIsoforms = args$onlySigIsoforms, + n = args$genesToPlot, + sortByQvals = args$sortByQvals, + pathToOutput = getwd(), + fileType = "pdf" + ) + + outputFile <- + file.path(getwd(), "extractConsequencesSummary.pdf") + + pdf( + file = outputFile, + onefile = FALSE, + height = 6, + width = 12 + ) - write.table( - consequenceEnrichment, - file = "consequencesEnrichment.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) + consequenceSummary <- extractConsequenceSummary( + SwitchList, + consequencesToAnalyze = "all", + includeCombined = FALSE, + asFractionTotal = args$asFractionTotal, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + plot = TRUE, + plotGenes = args$plotGenes, + simplifyLocation = args$simplifyLocation, + removeEmptyConsequences = args$removeEmptyConsequences, + returnResult = TRUE, + localTheme = theme_bw() + ) + dev.off() + + write.table( + consequenceSummary, + file = "consequencesSummary.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) - outputFile <- file.path(getwd(), "splicingEnrichment.pdf") - pdf( - file = outputFile, - onefile = FALSE, - height = 6, - width = 9 - ) - splicingEnrichment <- extractSplicingEnrichment( - SwitchList, - splicingToAnalyze = "all", - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - onlySigIsoforms = args$onlySigIsoforms, - countGenes = args$countGenes, - plot = TRUE, - minEventsForPlotting = 10, - returnResult = TRUE - ) - dev.off() + outputFile <- file.path(getwd(), "consequencesEnrichment.pdf") + pdf( + file = outputFile, + onefile = FALSE, + height = 6, + width = 9 + ) + consequenceEnrichment <- extractConsequenceEnrichment( + SwitchList, + consequencesToAnalyze = "all", + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + countGenes = args$countGenes, + analysisOppositeConsequence = args$analysisOppositeConsequence, + plot = TRUE, + localTheme = theme_bw(base_size = 12), + minEventsForPlotting = 10, + returnResult = TRUE + ) + dev.off() - write.table( - splicingEnrichment, - file = "splicingEnrichment.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) + write.table( + consequenceEnrichment, + file = "consequencesEnrichment.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) - outputFile <- file.path(getwd(), "splicingSummary.pdf") - pdf( - file = outputFile, - onefile = FALSE, - height = 6, - width = 12 - ) - splicingSummary <- extractSplicingSummary( - SwitchList, - splicingToAnalyze = "all", - asFractionTotal = args$asFractionTotal, - alpha = args$alpha, - dIFcutoff = args$dIFcutoff, - onlySigIsoforms = args$onlySigIsoforms, - plot = TRUE, - plotGenes = args$plotGenes, - localTheme = theme_bw(), - returnResult = TRUE - ) - dev.off() + outputFile <- file.path(getwd(), "splicingEnrichment.pdf") + pdf( + file = outputFile, + onefile = FALSE, + height = 6, + width = 9 + ) + splicingEnrichment <- extractSplicingEnrichment( + SwitchList, + splicingToAnalyze = "all", + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + onlySigIsoforms = args$onlySigIsoforms, + countGenes = args$countGenes, + plot = TRUE, + minEventsForPlotting = 10, + returnResult = TRUE + ) + dev.off() - write.table( - splicingSummary, - file = "splicingSummary.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) + write.table( + splicingEnrichment, + file = "splicingEnrichment.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) + - write.table( - SwitchList$switchConsequence, - file = "switchConsequence_fulldata.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) + outputFile <- file.path(getwd(), "splicingSummary.pdf") + pdf( + file = outputFile, + onefile = FALSE, + height = 6, + width = 12 + ) + splicingSummary <- extractSplicingSummary( + SwitchList, + splicingToAnalyze = "all", + asFractionTotal = args$asFractionTotal, + alpha = args$alpha, + dIFcutoff = args$dIFcutoff, + onlySigIsoforms = args$onlySigIsoforms, + plot = TRUE, + plotGenes = args$plotGenes, + localTheme = theme_bw(), + returnResult = TRUE + ) + dev.off() - write.table( - SwitchList$AlternativeSplicingAnalysis, - file = "switchSplicing_fulldata.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) + write.table( + splicingSummary, + file = "splicingSummary.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) - write.table( - SwitchList$isoformFeatures, - file = "IsoformFeatures.tsv", - quote = FALSE, - sep = "\t", - col.names = TRUE, - row.names = FALSE - ) + write.table( + SwitchList$switchConsequence, + file = "switchConsequence_fulldata.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) - ### Volcano like plot: - outputFile <- file.path(getwd(), "volcanoPlot.pdf") + write.table( + SwitchList$AlternativeSplicingAnalysis, + file = "switchSplicing_fulldata.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) - pdf( - file = outputFile, - onefile = FALSE, - height = 6, - width = 9 - ) + write.table( + SwitchList$isoformFeatures, + file = "IsoformFeatures.tsv", + quote = FALSE, + sep = "\t", + col.names = TRUE, + row.names = FALSE + ) + + ### Volcano like plot: + outputFile <- file.path(getwd(), "volcanoPlot.pdf") - p <- ggplot(data = SwitchList$isoformFeatures, aes(x = dIF, y = -log10(isoform_switch_q_value))) + - geom_point( - aes(color = abs(dIF) > 0.1 & isoform_switch_q_value < 0.05), # default cutoff - size = 1 - ) + - geom_hline(yintercept = -log10(0.05), linetype = "dashed") + # default cutoff - geom_vline(xintercept = c(-0.1, 0.1), linetype = "dashed") + # default cutoff - facet_wrap(~ condition_2) + - #facet_grid(condition_1 ~ condition_2) + # alternative to facet_wrap if you have overlapping conditions - scale_color_manual("Signficant\nIsoform Switch", values = c("black", "red")) + - labs(x = "dIF", y = "-Log10 ( Isoform Switch Q Value )") + - theme_bw() - print(p) - dev.off() + pdf( + file = outputFile, + onefile = FALSE, + height = 6, + width = 9 + ) + + p <- ggplot(data = SwitchList$isoformFeatures, aes(x = dIF, y = -log10(isoform_switch_q_value))) + + geom_point( + aes(color = abs(dIF) > 0.1 & isoform_switch_q_value < 0.05), # default cutoff + size = 1 + ) + + geom_hline(yintercept = -log10(0.05), linetype = "dashed") + # default cutoff + geom_vline(xintercept = c(-0.1, 0.1), linetype = "dashed") + # default cutoff + facet_wrap(~condition_2) + + # facet_grid(condition_1 ~ condition_2) + # alternative to facet_wrap if you have overlapping conditions + scale_color_manual("Signficant\nIsoform Switch", values = c("black", "red")) + + labs(x = "dIF", y = "-Log10 ( Isoform Switch Q Value )") + + theme_bw() + print(p) + dev.off() - ### Switch vs Gene changes: - outputFile <- file.path(getwd(), "switchGene.pdf") - pdf( - file = outputFile, - height = 6, - width = 9 - ) - p <- ggplot(data = SwitchList$isoformFeatures, - aes(x = gene_log2_fold_change, y = dIF)) + - geom_point(aes(color = abs(dIF) > 0.1 & - isoform_switch_q_value < 0.05), - size = 1) + - facet_wrap(~ condition_2) + - geom_hline(yintercept = 0, linetype = "dashed") + - geom_vline(xintercept = 0, linetype = "dashed") + - scale_color_manual("Signficant\nIsoform Switch", values = c("black", "red")) + - labs(x = "Gene log2 fold change", y = "dIF") + - theme_bw() - print(p) - dev.off() + ### Switch vs Gene changes: + outputFile <- file.path(getwd(), "switchGene.pdf") + pdf( + file = outputFile, + height = 6, + width = 9 + ) + p <- ggplot( + data = SwitchList$isoformFeatures, + aes(x = gene_log2_fold_change, y = dIF) + ) + + geom_point( + aes(color = abs(dIF) > 0.1 & + isoform_switch_q_value < 0.05), + size = 1 + ) + + facet_wrap(~condition_2) + + geom_hline(yintercept = 0, linetype = "dashed") + + geom_vline(xintercept = 0, linetype = "dashed") + + scale_color_manual("Signficant\nIsoform Switch", values = c("black", "red")) + + labs(x = "Gene log2 fold change", y = "dIF") + + theme_bw() + print(p) + dev.off() - outputFile <- file.path(getwd(), "splicingGenomewide.pdf") - pdf( - file = outputFile, - onefile = FALSE, - height = 6, - width = 14 - ) - splicingGenomeWide <- extractSplicingGenomeWide( - SwitchList, - featureToExtract = "isoformUsage", - splicingToAnalyze = "all", - plot = TRUE, - returnResult = TRUE - ) - dev.off() - } - save(SwitchList, file = "SwitchList.Rda") - + outputFile <- file.path(getwd(), "splicingGenomewide.pdf") + pdf( + file = outputFile, + onefile = FALSE, + height = 6, + width = 14 + ) + splicingGenomeWide <- extractSplicingGenomeWide( + SwitchList, + featureToExtract = "isoformUsage", + splicingToAnalyze = "all", + plot = TRUE, + returnResult = TRUE + ) + dev.off() + } + save(SwitchList, file = "SwitchList.Rda") } diff -r 298d81e5e138 -r d3377a16d881 isoformswitchanalyzer.xml --- a/isoformswitchanalyzer.xml Wed Dec 20 18:03:04 2023 +0000 +++ b/isoformswitchanalyzer.xml Wed Jan 14 09:30:42 2026 +0000 @@ -60,28 +60,71 @@ #set $filename = 'abundance.tsv' #end if + ## read cofactor repeats and generate cofactor_map dictionary + ## cofactor_map structure: {file_path: {cofactor_name: cofactor_level_name, ...}, ...} + #set $cofactor_map = {} + #set $cofactor_names = [] + #for $cofactor_item in $functionMode.tool_source.cofactor: + #set $cofactor_name = str($cofactor_item.cofactor_name) + $cofactor_names.append($cofactor_name) + #for $level_item in $cofactor_item.cofactor_level: + #set $level_name = str($level_item.cofactor_level_name) + #for $level_file in $level_item.cofactor_level_files: + #set $file_path = str($level_file) + #if $file_path not in $cofactor_map: + #set $cofactor_map[$file_path] = {} + #end if + #set $cofactor_map[$file_path][$cofactor_name] = $level_name + #end for + #end for + #end for + + ## create file_to_sample_map dictionary + #set $file_to_sample_map = {} + #for $index in range(len($functionMode.tool_source.first_factor.trans_counts)): + #set $sampleID = str($functionMode.tool_source.first_factor.factorLevel) + str($index) + #set $trans_file = $functionMode.tool_source.first_factor.trans_counts[$index] + #set $file_to_sample_map[$sampleID] = str($trans_file) $conditions.append($functionMode.tool_source.first_factor.factorLevel) - $sampleIDs.append(str($functionMode.tool_source.first_factor.factorLevel) + str($index)) + $sampleIDs.append($sampleID) $replicates.append($index) mkdir './input_files/${functionMode.tool_source.first_factor.factorLevel}${index}/' && - ln -s $functionMode.tool_source.first_factor.trans_counts[$index] './input_files/${functionMode.tool_source.first_factor.factorLevel}${index}/${filename}' && + ln -s $trans_file './input_files/${functionMode.tool_source.first_factor.factorLevel}${index}/${filename}' && #end for #for $index in range(len($functionMode.tool_source.second_factor.trans_counts)): + #set $sampleID = str($functionMode.tool_source.second_factor.factorLevel) + str($index) + #set $trans_file = $functionMode.tool_source.second_factor.trans_counts[$index] + #set $file_to_sample_map[$sampleID] = str($trans_file) $conditions.append($functionMode.tool_source.second_factor.factorLevel) - $sampleIDs.append(str($functionMode.tool_source.second_factor.factorLevel) + str($index)) + $sampleIDs.append($sampleID) $replicates.append($index) mkdir './input_files/${functionMode.tool_source.second_factor.factorLevel}${index}/' && - ln -s $functionMode.tool_source.second_factor.trans_counts[$index] './input_files/${functionMode.tool_source.second_factor.factorLevel}${index}/${filename}' && + ln -s $trans_file './input_files/${functionMode.tool_source.second_factor.factorLevel}${index}/${filename}' && #end for + Rscript '${__tool_directory__}/IsoformSwitchAnalyzeR.R' #for $i, $condition in enumerate($conditions) --condition $condition --sampleID $sampleIDs[$i] --replicate $replicates[$i] + #set $sample_file = $file_to_sample_map[$sampleIDs[$i]] + #if $sample_file in $cofactor_map + #set $cofactor_values = [] + #for $cofactor_name in $cofactor_names: + #if $cofactor_name in $cofactor_map[$sample_file] + #set $cofactor_value = $cofactor_map[$sample_file][$cofactor_name] + #silent $cofactor_values.append(str($cofactor_value)) + #end if + #end for + --cofactors $(','.join($cofactor_values)) + #end if #end for + #if len($cofactor_names) > 0 + --cofactorNames $(','.join($cofactor_names)) + #end if $functionMode.pairedSamples --modeSelector $functionMode.selector --parentDir './input_files' @@ -648,7 +691,15 @@ - + + + + + + + + + @@ -1115,7 +1166,82 @@ - + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+
+ + +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 1.20.0 - 5 + 6 bioconductor-isoformswitchanalyzer @@ -84,5 +84,23 @@ + + + + + + + + + + + + + + + + diff -r 298d81e5e138 -r d3377a16d881 test-data/ASP14_1.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ASP14_1.tabular Wed Jan 14 09:30:42 2026 +0000 @@ -0,0 +1,1001 @@ +t_id chr strand start end t_name num_exons length gene_id gene_name cov FPKM +1 chr10 + 90652 92824 ENST00000416477.1 6 747 ENSG00000237297.1 RP11-631M21.6 0.000000 0.000000 +2 chr10 - 92828 96173 ENST00000447903.2 4 2273 MSTRG.1 TUBB8 3.805964 6.376602 +3 chr10 - 92832 95347 ENST00000309812.4 4 1669 MSTRG.1 TUBB8 0.000000 0.000000 +4 chr10 - 92860 96173 MSTRG.1.3 4 2409 MSTRG.1 . 1.840897 3.084282 +5 chr10 - 93434 95347 ENST00000332708.5 3 958 MSTRG.1 TUBB8 0.000000 0.000000 +6 chr10 - 93518 120103 ENST00000413237.3 5 1968 MSTRG.1 TUBB8 0.000000 0.000000 +7 chr10 - 93645 95347 ENST00000482075.1 3 934 MSTRG.1 TUBB8 0.000000 0.000000 +8 chr10 - 126334 132205 ENST00000423948.1 7 1312 ENSG00000232420.2 IL9RP2 0.000000 0.000000 +9 chr10 + 180359 300577 MSTRG.2.1 15 4363 MSTRG.2 . 32.037445 53.676292 +10 chr10 + 180405 283617 ENST00000439456.1 5 788 MSTRG.2 ZMYND11 0.000000 0.000000 +11 chr10 + 180424 295201 ENST00000381602.4 14 2287 MSTRG.2 ZMYND11 7.133038 11.950861 +12 chr10 + 180424 300577 ENST00000309776.4 15 4404 MSTRG.2 ZMYND11 34.517624 57.831642 +13 chr10 + 180643 295201 ENST00000509513.2 14 2065 MSTRG.2 ZMYND11 12.182241 20.410416 +14 chr10 + 180643 300577 MSTRG.2.5 14 4433 MSTRG.2 . 28.804520 48.259773 +15 chr10 + 180742 300577 ENST00000397959.3 13 3831 MSTRG.2 ZMYND11 26.448338 44.312168 +16 chr10 + 180742 300577 MSTRG.2.7 14 3924 MSTRG.2 . 28.421135 47.617439 +17 chr10 + 181009 300577 ENST00000381591.1 15 4229 MSTRG.2 ZMYND11 34.835587 58.364365 +18 chr10 + 181424 300577 ENST00000381607.4 14 3909 MSTRG.2 ZMYND11 31.658037 53.040623 +19 chr10 + 181424 300577 ENST00000403354.1 13 3831 MSTRG.2 ZMYND11 26.806015 44.911434 +20 chr10 + 181449 300577 ENST00000402736.1 14 3953 MSTRG.2 ZMYND11 32.778385 54.917683 +21 chr10 + 181449 300577 MSTRG.2.12 15 4046 MSTRG.2 . 40.619740 68.055275 +22 chr10 - 200771 200883 ENST00000391029.1 1 113 MSTRG.3 RNA5SP297 0.000000 0.000000 +23 chr10 + 225930 300577 ENST00000602682.1 12 3744 MSTRG.2 ZMYND11 8.213870 13.761712 +24 chr10 + 225933 300577 ENST00000381604.4 15 4091 MSTRG.2 ZMYND11 14.626982 24.506392 +25 chr10 + 225934 283617 ENST00000397955.2 6 673 MSTRG.2 ZMYND11 7.276196 12.190710 +26 chr10 + 225934 300577 ENST00000381584.1 15 4090 MSTRG.2 ZMYND11 32.796349 54.947777 +27 chr10 + 225953 295201 ENST00000558098.2 13 1859 MSTRG.2 ZMYND11 10.610839 17.777649 +28 chr10 + 255833 300577 ENST00000545619.1 11 3616 MSTRG.2 ZMYND11 22.582615 37.835445 +29 chr10 + 255891 300577 ENST00000535374.1 10 3492 MSTRG.2 ZMYND11 38.890106 65.157402 +30 chr10 + 285902 292939 ENST00000488275.1 4 581 MSTRG.2 ZMYND11 3.513084 5.885904 +31 chr10 + 290411 294548 ENST00000473115.1 4 680 MSTRG.2 ZMYND11 1.292743 2.165892 +32 chr10 - 309144 309545 MSTRG.4.1 2 247 MSTRG.4 . 0.000000 0.000000 +33 chr10 - 320130 735683 ENST00000280886.6 37 7971 MSTRG.5 DIP2C 81.786140 137.026443 +34 chr10 - 320192 735683 MSTRG.5.2 38 8077 MSTRG.5 . 11.922276 19.974861 +35 chr10 - 320204 566221 MSTRG.5.5 39 7926 MSTRG.5 . 0.000000 0.000000 +36 chr10 - 320204 644381 MSTRG.5.3 39 7922 MSTRG.5 . 0.000000 0.000000 +37 chr10 - 320204 644381 MSTRG.5.4 37 7724 MSTRG.5 . 0.000000 0.000000 +38 chr10 + 323124 323248 ENST00000579524.1 1 125 MSTRG.6 AL603831.1 0.000000 0.000000 +39 chr10 - 327955 328065 ENST00000364991.1 1 111 MSTRG.7 RNA5SP298 0.000000 0.000000 +40 chr10 - 370579 375541 ENST00000434695.2 3 721 MSTRG.5 DIP2C 0.000000 0.000000 +41 chr10 - 401488 629900 ENST00000381496.3 26 4205 MSTRG.5 DIP2C 0.000000 0.000000 +42 chr10 - 402180 419130 ENST00000540204.1 8 1358 MSTRG.5 DIP2C 0.000000 0.000000 +43 chr10 - 410902 433749 ENST00000421992.1 7 731 MSTRG.5 DIP2C 0.000000 0.000000 +44 chr10 - 476181 476444 ENST00000470784.2 1 264 MSTRG.8 RN7SL754P 0.000000 0.000000 +45 chr10 + 483501 487110 ENST00000425723.2 2 558 MSTRG.9 RP11-490E15.2 0.000000 0.000000 +46 chr10 - 486811 735683 ENST00000423550.1 5 727 MSTRG.5 DIP2C 0.000000 0.000000 +47 chr10 + 674578 677195 ENST00000451601.1 2 1657 MSTRG.10 RP11-809C18.3 0.000000 0.000000 +48 chr10 - 687629 687718 ENST00000578903.1 1 90 MSTRG.11 MIR5699 0.000000 0.000000 +49 chr10 + 695888 698593 ENST00000441152.2 3 2249 MSTRG.12 PRR26 0.000000 0.000000 +50 chr10 + 696017 711109 ENST00000381489.5 3 2838 MSTRG.12 PRR26 0.000000 0.000000 +51 chr10 + 709498 712562 ENST00000443662.1 2 550 MSTRG.12 RP11-809C18.5 0.000000 0.000000 +52 chr10 + 714400 715521 ENST00000608587.1 1 1122 MSTRG.13 RP11-809C18.4 0.000000 0.000000 +53 chr10 + 789932 790898 ENST00000412695.1 2 424 ENSG00000231601.1 RP11-164C1.2 0.000000 0.000000 +54 chr10 - 855213 936689 MSTRG.14.2 18 6075 MSTRG.14 . 18.337990 30.723904 +55 chr10 - 855213 977680 MSTRG.14.1 18 8034 MSTRG.14 . 29.593002 49.580814 +56 chr10 - 855482 977680 MSTRG.14.3 18 5953 MSTRG.14 . 42.656967 71.468491 +57 chr10 - 855482 977680 MSTRG.14.4 19 7836 MSTRG.14 . 28.594900 47.908573 +58 chr10 - 855484 931702 ENST00000316157.3 17 5640 MSTRG.14 LARP4B 20.343277 34.083607 +59 chr10 - 857746 866870 ENST00000609318.1 4 4848 MSTRG.14 LARP4B 3.734940 6.257607 +60 chr10 - 858446 871256 ENST00000448368.1 6 1510 MSTRG.14 LARP4B 5.328998 8.928329 +61 chr10 - 860382 863829 ENST00000608970.1 3 699 MSTRG.14 LARP4B 1.877008 3.144783 +62 chr10 - 860702 861655 ENST00000469487.1 2 859 MSTRG.14 LARP4B 1.654516 2.772015 +63 chr10 - 909683 977680 ENST00000476529.1 6 853 MSTRG.14 LARP4B 2.588840 4.337404 +64 chr10 - 909719 977680 ENST00000406525.2 6 797 MSTRG.14 LARP4B 0.000000 0.000000 +65 chr10 - 910094 977680 ENST00000481118.1 5 685 MSTRG.14 LARP4B 0.000000 0.000000 +66 chr10 - 910181 949455 ENST00000412411.1 5 432 MSTRG.14 LARP4B 0.000000 0.000000 +67 chr10 + 978966 988683 ENST00000435531.1 3 407 ENSG00000229869.1 RP11-363N22.2 0.000000 0.000000 +68 chr10 - 1017097 1034281 ENST00000381466.1 2 1875 ENSG00000205740.1 AL359878.1 0.000000 0.000000 +69 chr10 + 1034338 1065876 ENST00000360803.4 17 4696 MSTRG.15 GTPBP4 389.001038 651.741577 +70 chr10 + 1034402 1056460 ENST00000491635.1 11 2223 MSTRG.15 GTPBP4 16.072796 26.928743 +71 chr10 + 1034402 1065876 ENST00000538293.1 16 4528 MSTRG.15 GTPBP4 0.000000 0.000000 +72 chr10 + 1034646 1043248 ENST00000360059.5 5 756 MSTRG.15 GTPBP4 0.000000 0.000000 +73 chr10 + 1034655 1065876 ENST00000545048.1 17 4800 MSTRG.15 GTPBP4 113.512177 190.180984 +74 chr10 + 1051778 1053260 ENST00000491261.1 2 373 MSTRG.15 GTPBP4 7.128790 11.943744 +75 chr10 + 1058340 1065876 ENST00000483839.2 4 3335 MSTRG.15 GTPBP4 1.806978 3.027454 +76 chr10 - 1064847 1071799 ENST00000277517.1 5 1359 MSTRG.16 IDI2 0.000000 0.000000 +77 chr10 + 1068606 1090138 ENST00000536039.1 3 893 MSTRG.17 IDI2-AS1 0.000000 0.000000 +78 chr10 + 1068608 1090138 ENST00000420381.1 5 1187 MSTRG.17 IDI2-AS1 1.933516 3.239459 +79 chr10 + 1068608 1090138 ENST00000428780.2 4 1054 MSTRG.17 IDI2-AS1 0.000000 0.000000 +80 chr10 + 1068614 1081916 ENST00000434470.1 3 490 MSTRG.17 IDI2-AS1 0.000000 0.000000 +81 chr10 - 1085848 1095110 ENST00000381344.3 5 2301 MSTRG.18 IDI1 1259.630371 2110.414551 +82 chr10 - 1086843 1095110 ENST00000491735.1 4 1133 MSTRG.18 IDI1 93.713623 157.010010 +83 chr10 - 1088233 1088295 ENST00000459467.1 1 63 MSTRG.19 RNU7-163P 18.984127 31.806454 +84 chr10 - 1088489 1094803 ENST00000427898.1 3 907 MSTRG.18 IDI1 11.607795 19.447973 +85 chr10 - 1088572 1095110 ENST00000429642.1 4 1304 MSTRG.18 IDI1 5.678649 9.514142 +86 chr10 - 1088617 1095110 ENST00000482091.1 3 1264 MSTRG.18 IDI1 30.361935 50.869102 +87 chr10 + 1095478 1178557 ENST00000358220.1 14 4902 MSTRG.20 WDR37 2.113078 3.540301 +88 chr10 - 1095714 1102356 MSTRG.21.1 3 4349 MSTRG.21 . 6.385421 10.698285 +89 chr10 - 1096197 1102356 MSTRG.21.2 2 4097 MSTRG.21 . 18.432425 30.882118 +90 chr10 - 1096232 1100338 MSTRG.21.3 2 1740 MSTRG.21 . 2.065192 3.460071 +91 chr10 + 1102293 1178557 MSTRG.20.2 14 4826 MSTRG.20 . 0.000000 0.000000 +92 chr10 + 1102344 1142566 ENST00000381329.1 9 1307 MSTRG.20 WDR37 2.850181 4.775261 +93 chr10 + 1102344 1178557 MSTRG.20.3 14 4962 MSTRG.20 . 1.124941 1.884753 +94 chr10 + 1102382 1178557 MSTRG.20.5 14 4921 MSTRG.20 . 3.893378 6.523057 +95 chr10 + 1102420 1178557 MSTRG.20.6 13 4708 MSTRG.20 . 0.000000 0.000000 +96 chr10 + 1102713 1178557 MSTRG.20.7 14 4997 MSTRG.20 . 11.782556 19.740772 +97 chr10 + 1102713 1178557 MSTRG.20.8 14 4908 MSTRG.20 . 10.878611 18.226280 +98 chr10 + 1102743 1178557 MSTRG.20.9 12 4498 MSTRG.20 . 6.753710 11.315325 +99 chr10 + 1102750 1178557 MSTRG.20.10 12 4580 MSTRG.20 . 6.904214 11.567483 +100 chr10 + 1102763 1178557 MSTRG.20.11 14 4855 MSTRG.20 . 14.280223 23.925423 +101 chr10 + 1102798 1178557 ENST00000263150.4 14 4909 MSTRG.20 WDR37 14.960776 25.065638 +102 chr10 + 1120323 1142186 ENST00000436154.1 8 714 MSTRG.20 WDR37 0.000000 0.000000 +103 chr10 + 1169747 1178557 ENST00000482165.1 4 3951 MSTRG.20 WDR37 0.000000 0.000000 +104 chr10 + 1205708 1210612 ENST00000425630.1 3 2434 ENSG00000229205.2 LINC00200 0.000000 0.000000 +105 chr10 + 1205744 1206937 ENST00000583117.1 2 632 ENSG00000229205.2 LINC00200 0.000000 0.000000 +106 chr10 - 1228073 1779670 ENST00000381312.1 10 3606 MSTRG.22 ADARB2 0.000000 0.000000 +107 chr10 - 1228074 1246325 ENST00000381310.3 3 1835 MSTRG.22 ADARB2 0.000000 0.000000 +108 chr10 - 1228785 1232506 ENST00000474762.1 3 768 MSTRG.22 ADARB2 0.000000 0.000000 +109 chr10 - 1228983 1234186 ENST00000490172.1 3 599 MSTRG.22 ADARB2 0.000000 0.000000 +110 chr10 - 1229091 1246325 ENST00000381305.1 4 703 MSTRG.22 ADARB2 0.000000 0.000000 +111 chr10 - 1245386 1246325 ENST00000477140.1 2 697 MSTRG.22 ADARB2 0.000000 0.000000 +112 chr10 - 1261616 1282593 ENST00000469464.1 3 1741 MSTRG.22 ADARB2 0.000000 0.000000 +113 chr10 - 1403196 1403832 ENST00000432987.1 2 359 MSTRG.23 RP11-398B16.2 0.000000 0.000000 +114 chr10 + 1568832 1599179 ENST00000421697.2 2 637 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +115 chr10 + 1568958 1577868 ENST00000381301.3 3 625 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +116 chr10 - 2047667 2056542 ENST00000413603.1 3 2097 ENSG00000234962.1 LINC00700 0.000000 0.000000 +117 chr10 - 2054459 2056542 ENST00000438372.1 3 777 ENSG00000234962.1 LINC00700 0.000000 0.000000 +118 chr10 - 2054847 2055605 ENST00000454424.1 2 484 ENSG00000234962.1 LINC00700 0.000000 0.000000 +119 chr10 + 2114039 2123291 ENST00000435539.1 2 432 ENSG00000226694.2 RP11-69C17.2 0.000000 0.000000 +120 chr10 + 2140361 2140463 ENST00000517189.1 1 103 ENSG00000252998.1 RNU6-889P 0.000000 0.000000 +121 chr10 + 2208526 2211654 ENST00000421077.1 2 2321 ENSG00000227912.1 RP11-69C17.3 0.000000 0.000000 +122 chr10 - 2211334 2231668 ENST00000418524.2 5 587 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +123 chr10 - 2211341 2218626 ENST00000436003.2 2 196 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +124 chr10 + 2241581 2241682 ENST00000390854.1 1 102 ENSG00000212156.1 RNU6-576P 0.000000 0.000000 +125 chr10 - 2347277 2357269 ENST00000418295.1 3 742 ENSG00000234556.1 LINC00701 0.000000 0.000000 +126 chr10 - 2488447 2489546 ENST00000414107.1 2 756 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +127 chr10 - 2488447 2489546 ENST00000441907.1 2 764 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +128 chr10 - 2488452 2489546 ENST00000439973.1 2 714 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +129 chr10 - 2495329 2495418 ENST00000580586.1 1 90 ENSG00000264261.1 AC024908.1 0.000000 0.000000 +130 chr10 + 2541913 2542762 ENST00000431209.1 2 332 ENSG00000237500.1 RP11-526P5.1 0.000000 0.000000 +131 chr10 + 2543975 2609431 ENST00000438753.1 2 918 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +132 chr10 + 2543995 2579817 ENST00000437289.1 2 320 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +133 chr10 + 2978213 2978633 ENST00000419388.1 1 421 ENSG00000231743.1 RP11-89K18.1 0.000000 0.000000 +134 chr10 + 3052723 3055303 ENST00000439575.1 3 608 ENSG00000234182.1 RP11-118K6.2 0.000000 0.000000 +135 chr10 - 3107576 3109169 MSTRG.25.1 2 1232 MSTRG.25 . 3.596979 6.026464 +136 chr10 - 3107616 3108582 ENST00000607898.1 1 967 MSTRG.25 RP11-118K6.3 1.799919 3.015627 +137 chr10 + 3108525 3143746 ENST00000607886.1 4 432 MSTRG.26 PFKP 0.000000 0.000000 +138 chr10 + 3109712 3178985 ENST00000381125.4 22 2645 MSTRG.26 PFKP 1305.106812 2186.606934 +139 chr10 + 3109864 3111581 ENST00000495715.1 2 152 MSTRG.26 PFKP 0.000000 0.000000 +140 chr10 + 3110819 3178985 ENST00000381075.2 24 2769 MSTRG.26 PFKP 1.244887 2.085713 +141 chr10 + 3111425 3146136 ENST00000421751.1 5 665 MSTRG.26 PFKP 2.470544 4.139208 +142 chr10 + 3112437 3147693 ENST00000407806.2 7 733 MSTRG.26 PFKP 0.000000 0.000000 +143 chr10 + 3146916 3155710 ENST00000415005.1 8 1142 MSTRG.26 PFKP 6.226836 10.432589 +144 chr10 + 3146939 3151672 ENST00000468050.1 6 511 MSTRG.26 PFKP 1.592841 2.668684 +145 chr10 + 3147071 3149501 ENST00000460445.1 3 628 MSTRG.26 PFKP 2.607341 4.368401 +146 chr10 + 3155650 3172175 ENST00000413079.1 5 538 MSTRG.26 PFKP 13.731054 23.005333 +147 chr10 + 3171199 3178985 ENST00000381072.1 6 1698 MSTRG.26 PFKP 22.021648 36.895592 +148 chr10 + 3175427 3179904 ENST00000433193.1 4 453 MSTRG.26 PFKP 2.979418 4.991787 +149 chr10 - 3179920 3180807 ENST00000490510.1 2 778 MSTRG.27 PITRM1 0.000000 0.000000 +150 chr10 - 3179920 3191591 ENST00000464395.1 9 3240 MSTRG.27 PITRM1 33.455921 56.052841 +151 chr10 - 3179920 3215003 MSTRG.27.1 25 3258 MSTRG.27 . 213.325760 357.411011 +152 chr10 - 3179922 3215003 ENST00000224949.4 27 3454 MSTRG.27 PITRM1 152.669037 255.785324 +153 chr10 - 3179922 3215003 ENST00000380989.2 27 3457 MSTRG.27 PITRM1 84.645325 141.816772 +154 chr10 - 3179926 3200345 ENST00000380994.1 16 2645 MSTRG.27 PITRM1 3.914769 6.558897 +155 chr10 - 3180016 3215003 ENST00000451104.2 24 3059 MSTRG.27 PITRM1 0.000000 0.000000 +156 chr10 - 3180883 3186558 ENST00000455371.1 4 673 MSTRG.27 PITRM1 3.333517 5.585053 +157 chr10 - 3183700 3190255 ENST00000451454.1 7 883 MSTRG.27 PITRM1 2.297037 3.848510 +158 chr10 + 3183824 3206477 ENST00000601046.1 4 577 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +159 chr10 + 3183824 3210164 ENST00000598280.1 4 601 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +160 chr10 + 3183864 3190814 ENST00000441377.1 4 3998 MSTRG.28 PITRM1-AS1 1.742292 2.919077 +161 chr10 + 3185241 3190814 ENST00000430356.2 3 3823 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +162 chr10 - 3185675 3187908 ENST00000424714.1 3 489 MSTRG.27 PITRM1 3.267431 5.474331 +163 chr10 - 3193368 3201234 ENST00000430362.1 6 802 MSTRG.27 PITRM1 6.025155 10.094687 +164 chr10 - 3205324 3207526 ENST00000488065.1 2 851 MSTRG.27 PITRM1 6.945708 11.637003 +165 chr10 + 3266008 3269599 ENST00000445932.1 3 597 ENSG00000236968.1 RP11-298E9.5 0.000000 0.000000 +166 chr10 - 3282563 3299466 ENST00000417149.1 4 454 MSTRG.29 RP11-298E9.6 0.000000 0.000000 +167 chr10 + 3291138 3291944 MSTRG.30.1 2 618 MSTRG.30 . 1.996764 3.345425 +168 chr10 + 3308195 3309207 ENST00000436340.1 2 463 ENSG00000227338.1 RP11-195B3.1 0.000000 0.000000 +169 chr10 - 3474575 3478062 MSTRG.31.1 3 2349 MSTRG.31 . 0.000000 0.000000 +170 chr10 + 3494616 3543443 MSTRG.32.1 2 851 MSTRG.32 . 1.048179 1.756144 +171 chr10 - 3529086 3545030 ENST00000413993.1 5 832 MSTRG.33 RP11-482E14.1 0.000000 0.000000 +172 chr10 - 3574286 3579223 ENST00000426811.1 2 430 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +173 chr10 - 3577304 3579049 ENST00000413757.1 2 372 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +174 chr10 - 3599384 3614279 MSTRG.34.1 3 496 MSTRG.34 . 0.000000 0.000000 +175 chr10 - 3710520 3710836 MSTRG.35.1 1 317 MSTRG.35 . 1.422713 2.383647 +176 chr10 + 3793259 3805418 ENST00000421629.2 6 759 ENSG00000229672.2 RP11-184A2.3 0.000000 0.000000 +177 chr10 + 3810107 3810943 ENST00000415358.1 2 313 ENSG00000228353.1 RP11-184A2.2 0.000000 0.000000 +178 chr10 - 3818188 3822421 ENST00000461124.1 3 776 MSTRG.36 KLF6 0.000000 0.000000 +179 chr10 - 3818188 3827473 ENST00000497571.1 4 4662 MSTRG.36 KLF6 199.224792 333.785919 +180 chr10 - 3818189 3827473 ENST00000542957.1 3 4537 MSTRG.36 KLF6 118.845039 199.115784 +181 chr10 - 3821239 3824406 ENST00000173785.4 3 1088 MSTRG.36 KLF6 1.733436 2.904240 +182 chr10 - 3821742 3823832 ENST00000492125.1 2 1576 MSTRG.36 KLF6 14.820184 24.830086 +183 chr10 - 3822519 3827473 ENST00000469435.1 2 2257 MSTRG.36 KLF6 15.986419 26.784023 +184 chr10 - 3824000 3827473 ENST00000380946.3 3 842 MSTRG.36 KLF6 1.848111 3.096369 +185 chr10 + 3827756 3829407 MSTRG.37.1 1 1652 MSTRG.37 . 4.182809 7.007977 +186 chr10 + 3876142 3876920 ENST00000413339.1 2 536 ENSG00000230573.1 RP11-464C19.2 0.000000 0.000000 +187 chr10 + 3976711 3978005 ENST00000432452.2 2 591 ENSG00000226005.3 RP11-464C19.3 0.000000 0.000000 +188 chr10 + 4067132 4070586 ENST00000455525.1 2 633 ENSG00000227101.1 RP11-433J20.2 0.000000 0.000000 +189 chr10 + 4093918 4131205 ENST00000455199.1 4 2287 ENSG00000236990.1 RP11-433J20.1 0.000000 0.000000 +190 chr10 - 4243333 4286104 ENST00000608792.1 3 6300 MSTRG.38 LINC00702 0.000000 0.000000 +191 chr10 - 4277752 4285879 ENST00000454470.1 2 407 MSTRG.38 LINC00702 0.000000 0.000000 +192 chr10 - 4277752 4286104 MSTRG.38.2 3 497 MSTRG.38 . 0.000000 0.000000 +193 chr10 - 4285142 4285981 ENST00000418372.1 2 446 MSTRG.38 LINC00702 0.000000 0.000000 +194 chr10 + 4289424 4299004 MSTRG.39.1 2 1122 MSTRG.39 . 0.000000 0.000000 +195 chr10 + 4426438 4452804 ENST00000454152.1 2 2390 ENSG00000224382.1 LINC00703 0.000000 0.000000 +196 chr10 + 4448694 4451443 ENST00000434902.1 2 869 ENSG00000224382.1 LINC00703 0.000000 0.000000 +197 chr10 - 4457497 4468371 ENST00000420082.1 4 691 ENSG00000230096.1 RP11-34C15.2 0.000000 0.000000 +198 chr10 + 4557144 4557249 ENST00000384396.1 1 106 ENSG00000207124.1 RNU6-163P 0.000000 0.000000 +199 chr10 - 4621911 4720444 MSTRG.40.1 3 2062 MSTRG.40 . 0.000000 0.000000 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4882018 ENST00000462718.3 6 693 MSTRG.44 AKR1E2 0.000000 0.000000 +213 chr10 + 4868330 4890575 MSTRG.44.3 7 2727 MSTRG.44 . 3.252794 5.449808 +214 chr10 + 4868359 4883976 MSTRG.44.4 6 3318 MSTRG.44 . 3.572864 5.986061 +215 chr10 + 4868369 4890575 ENST00000474119.1 10 1947 MSTRG.44 AKR1E2 3.799837 6.366337 +216 chr10 + 4868426 4890575 ENST00000463345.1 10 1976 MSTRG.44 AKR1E2 3.044281 5.100461 +217 chr10 + 4868430 4889491 MSTRG.44.7 7 861 MSTRG.44 . 3.253449 5.450905 +218 chr10 + 4868446 4890575 ENST00000298375.7 10 1887 MSTRG.44 AKR1E2 4.304510 7.211878 +219 chr10 + 4868447 4888733 ENST00000525281.1 6 1383 MSTRG.44 AKR1E2 2.568018 4.302518 +220 chr10 + 4868478 4879773 ENST00000525627.1 3 334 MSTRG.44 AKR1E2 0.000000 0.000000 +221 chr10 + 4868488 4888733 MSTRG.44.16 9 3214 MSTRG.44 . 2.538284 4.252701 +222 chr10 + 4868488 4889491 ENST00000532248.1 7 847 MSTRG.44 AKR1E2 5.322343 8.917179 +223 chr10 + 4868488 4889491 MSTRG.44.11 8 1894 MSTRG.44 . 4.795599 8.034659 +224 chr10 + 4868488 4890575 ENST00000334019.4 8 1674 MSTRG.44 AKR1E2 6.248624 10.469091 +225 chr10 + 4868488 4890575 ENST00000345253.5 7 1551 MSTRG.44 AKR1E2 2.314692 3.878090 +226 chr10 + 4868488 4890575 MSTRG.44.12 8 2029 MSTRG.44 . 7.612312 12.753847 +227 chr10 + 4868488 4890575 MSTRG.44.13 10 1897 MSTRG.44 . 2.177122 3.647602 +228 chr10 + 4868488 4995278 MSTRG.44.14 15 2744 MSTRG.44 . 1.269968 2.127734 +229 chr10 + 4868488 4995278 MSTRG.44.17 14 1627 MSTRG.44 . 0.000000 0.000000 +230 chr10 + 4868488 5025475 MSTRG.44.15 20 9882 MSTRG.44 . 10.698939 17.925257 +231 chr10 + 4875547 4888733 ENST00000441590.1 5 1218 MSTRG.44 AKR1E2 2.668256 4.470459 +232 chr10 + 4875592 4884049 ENST00000525572.1 5 506 MSTRG.44 AKR1E2 0.000000 0.000000 +233 chr10 + 4881976 4889679 ENST00000487985.1 4 523 MSTRG.44 AKR1E2 0.000000 0.000000 +234 chr10 - 4914093 4934167 ENST00000432950.1 9 983 MSTRG.45 AKR1C6P 0.000000 0.000000 +235 chr10 - 4927673 4934167 ENST00000281339.5 5 495 MSTRG.45 AKR1C6P 0.000000 0.000000 +236 chr10 + 4934796 5025475 ENST00000434459.2 14 7354 MSTRG.44 AKR1C1 0.000000 0.000000 +237 chr10 - 5004628 5004760 ENST00000459095.1 1 133 MSTRG.46 U8 0.000000 0.000000 +238 chr10 + 5005445 5025475 ENST00000380872.4 9 6705 MSTRG.44 AKR1C1 1.589362 2.662855 +239 chr10 + 5005445 5025475 ENST00000477661.1 8 7970 MSTRG.44 AKR1C1 0.000000 0.000000 +240 chr10 + 5005641 5014941 ENST00000442997.1 7 746 MSTRG.44 AKR1C1 0.000000 0.000000 +241 chr10 + 5005981 5012133 ENST00000380859.1 6 858 MSTRG.44 AKR1C1 1.112385 1.863716 +242 chr10 + 5007683 5010500 ENST00000476100.1 2 1973 MSTRG.44 AKR1C1 0.000000 0.000000 +243 chr10 - 5029967 5046215 ENST00000380753.4 9 3381 MSTRG.47 AKR1C2 5.902591 9.889340 +244 chr10 - 5029967 5060223 MSTRG.47.1 12 3914 MSTRG.47 . 1.072796 1.797388 +245 chr10 - 5030125 5060223 MSTRG.47.3 9 3083 MSTRG.47 . 16.895061 28.306385 +246 chr10 - 5031626 5046114 ENST00000421196.3 8 1543 MSTRG.47 AKR1C2 0.000000 0.000000 +247 chr10 - 5031966 5060223 ENST00000407674.1 11 1605 MSTRG.47 AKR1C2 0.000000 0.000000 +248 chr10 - 5031981 5046215 ENST00000460124.1 8 2639 MSTRG.47 AKR1C2 0.000000 0.000000 +249 chr10 + 5037680 5039586 ENST00000451575.2 3 445 MSTRG.48 RP11-499O7.7 2.207479 3.698462 +250 chr10 - 5038026 5060223 ENST00000604507.1 7 821 MSTRG.47 AKR1C2 0.000000 0.000000 +251 chr10 + 5038074 5039586 ENST00000440414.1 3 316 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +252 chr10 - 5042103 5046114 ENST00000455190.1 4 1006 MSTRG.47 AKR1C2 0.000000 0.000000 +253 chr10 - 5042495 5046114 ENST00000604184.1 4 614 MSTRG.47 AKR1C2 0.000000 0.000000 +254 chr10 + 5046902 5047034 ENST00000459141.1 1 133 MSTRG.49 U8 0.000000 0.000000 +255 chr10 - 5048187 5060223 ENST00000604428.1 4 600 MSTRG.47 AKR1C2 0.000000 0.000000 +256 chr10 - 5048654 5060223 ENST00000604711.1 4 673 MSTRG.47 AKR1C2 0.000000 0.000000 +257 chr10 - 5052655 5058084 ENST00000603073.1 3 579 MSTRG.47 AKR1C2 0.000000 0.000000 +258 chr10 - 5055499 5057426 ENST00000604439.1 2 646 MSTRG.47 AKR1C2 0.000000 0.000000 +259 chr10 + 5077263 5149878 MSTRG.50.1 11 1895 MSTRG.50 . 463.836609 777.122803 +260 chr10 + 5077263 5149878 MSTRG.50.2 10 1725 MSTRG.50 . 303.452393 508.411316 +261 chr10 + 5077263 5149878 MSTRG.50.3 10 1739 MSTRG.50 . 366.191986 613.526733 +262 chr10 + 5077546 5144402 ENST00000605781.1 6 859 MSTRG.50 AKR1C3 240.188339 402.417236 +263 chr10 + 5077546 5149878 MSTRG.50.4 10 1412 MSTRG.50 . 1060.715698 1777.148193 +264 chr10 + 5077549 5139742 ENST00000470862.2 6 1013 MSTRG.50 AKR1C3 30.635099 51.326771 +265 chr10 + 5077550 5139742 ENST00000480822.1 5 808 MSTRG.50 AKR1C3 67.290947 112.740845 +266 chr10 - 5090055 5090173 ENST00000515931.1 1 119 MSTRG.51 U8 0.000000 0.000000 +267 chr10 + 5090981 5141641 ENST00000602997.1 6 671 MSTRG.50 AKR1C3 25.644897 42.966068 +268 chr10 + 5091004 5093862 ENST00000451627.1 2 125 MSTRG.50 RP11-499O7.4 1.015934 1.702120 +269 chr10 + 5119830 5149878 ENST00000605149.1 9 1411 MSTRG.50 AKR1C3 345.347626 578.603577 +270 chr10 + 5119973 5149878 ENST00000439082.2 9 1268 MSTRG.50 AKR1C3 4.182678 7.007758 +271 chr10 - 5135600 5135735 ENST00000459536.1 1 136 MSTRG.52 U8 0.000000 0.000000 +272 chr10 + 5135985 5149878 ENST00000380554.3 9 1807 MSTRG.50 AKR1C3 1160.462769 1944.266724 +273 chr10 + 5136606 5140368 ENST00000480697.2 3 1026 MSTRG.50 AKR1C3 7.913495 13.258456 +274 chr10 + 5136610 5142085 ENST00000605322.1 3 846 MSTRG.50 AKR1C3 30.189222 50.579735 +275 chr10 + 5138337 5139742 ENST00000603312.1 2 550 MSTRG.50 AKR1C3 33.260422 55.725296 +276 chr10 + 5147467 5149878 ENST00000603484.1 2 629 MSTRG.50 AKR1C3 15.742823 26.375896 +277 chr10 + 5152190 5156102 MSTRG.53.1 1 3913 MSTRG.53 . 4.172637 6.990934 +278 chr10 - 5164279 5177418 ENST00000427165.1 5 609 MSTRG.54 AKR1C5P 0.000000 0.000000 +279 chr10 - 5164295 5166124 MSTRG.54.2 3 1240 MSTRG.54 . 0.000000 0.000000 +280 chr10 - 5179314 5227150 MSTRG.55.1 10 1363 MSTRG.55 . 0.000000 0.000000 +281 chr10 - 5196335 5202333 ENST00000473890.1 5 645 MSTRG.55 AKR1CL1 0.000000 0.000000 +282 chr10 - 5196655 5202333 ENST00000465430.1 3 1716 MSTRG.55 AKR1CL1 0.000000 0.000000 +283 chr10 - 5202775 5227150 ENST00000472691.1 5 595 MSTRG.55 AKR1CL1 0.000000 0.000000 +284 chr10 - 5202775 5227150 ENST00000488756.1 4 539 MSTRG.55 AKR1CL1 0.000000 0.000000 +285 chr10 - 5202775 5326531 MSTRG.55.4 16 3182 MSTRG.55 . 0.000000 0.000000 +286 chr10 - 5203694 5227150 ENST00000334314.3 4 498 MSTRG.55 AKR1CL1 0.000000 0.000000 +287 chr10 - 5226975 5244449 ENST00000445191.1 2 81 MSTRG.55 AKR1CL1 0.000000 0.000000 +288 chr10 + 5237425 5238914 ENST00000469875.2 2 837 MSTRG.56 AKR1C4 0.000000 0.000000 +289 chr10 + 5237426 5260912 ENST00000380448.1 11 1414 MSTRG.56 AKR1C4 2.669394 4.472366 +290 chr10 - 5237847 5237936 ENST00000516100.1 1 90 MSTRG.57 U8 0.000000 0.000000 +291 chr10 + 5238798 5260912 ENST00000263126.1 9 1194 MSTRG.56 AKR1C4 0.000000 0.000000 +292 chr10 + 5249132 5249705 ENST00000441452.1 1 574 MSTRG.58 RP11-445P17.6 0.000000 0.000000 +293 chr10 - 5257183 5333847 MSTRG.55.9 13 4052 MSTRG.55 . 6.099651 10.219500 +294 chr10 + 5276321 5305371 ENST00000428920.2 2 680 MSTRG.59 RP11-445P17.3 0.000000 0.000000 +295 chr10 - 5305897 5333847 MSTRG.55.10 11 2734 MSTRG.55 . 2.234200 3.743232 +296 chr10 - 5305973 5333847 MSTRG.55.11 10 2491 MSTRG.55 . 0.000000 0.000000 +297 chr10 - 5306256 5326531 MSTRG.55.12 8 1358 MSTRG.55 . 4.357647 7.300905 +298 chr10 - 5307136 5326531 MSTRG.55.13 6 2330 MSTRG.55 . 1.980902 3.318850 +299 chr10 - 5307996 5313416 ENST00000449457.1 2 909 MSTRG.55 RP11-445P17.8 0.000000 0.000000 +300 chr10 - 5317136 5330433 ENST00000305623.8 8 895 MSTRG.55 AKR1C7P 0.000000 0.000000 +301 chr10 - 5317169 5327975 ENST00000432689.2 6 685 MSTRG.55 AKR1C7P 0.000000 0.000000 +302 chr10 - 5319027 5326531 MSTRG.55.17 4 1603 MSTRG.55 . 0.000000 0.000000 +303 chr10 - 5346394 5346828 ENST00000451325.1 1 435 ENSG00000223987.1 RP11-445P17.5 0.000000 0.000000 +304 chr10 + 5406972 5416169 ENST00000380433.3 2 714 ENSG00000178473.5 UCN3 0.000000 0.000000 +305 chr10 - 5435061 5446793 ENST00000380419.3 4 1798 MSTRG.60 TUBAL3 0.000000 0.000000 +306 chr10 - 5435232 5446793 ENST00000479328.1 4 1507 MSTRG.60 TUBAL3 0.000000 0.000000 +307 chr10 + 5454514 5500426 ENST00000355029.4 12 3402 MSTRG.61 NET1 219.681320 368.059296 +308 chr10 + 5455752 5500426 ENST00000542715.1 12 3184 MSTRG.61 NET1 0.000000 0.000000 +309 chr10 + 5488572 5494883 ENST00000486354.1 4 622 MSTRG.61 NET1 0.000000 0.000000 +310 chr10 + 5488572 5496485 ENST00000449083.1 4 637 MSTRG.61 NET1 0.000000 0.000000 +311 chr10 + 5488574 5500426 ENST00000380359.3 10 3253 MSTRG.61 NET1 83.561661 140.001175 +312 chr10 + 5494382 5495116 ENST00000465087.1 2 403 MSTRG.61 NET1 0.000000 0.000000 +313 chr10 + 5496344 5498493 ENST00000484741.1 3 757 MSTRG.61 NET1 1.778360 2.979506 +314 chr10 - 5540658 5541533 ENST00000380332.3 1 876 ENSG00000178372.6 CALML5 0.000000 0.000000 +315 chr10 - 5556207 5565140 ENST00000543008.1 2 4531 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +316 chr10 - 5559244 5568209 ENST00000542093.1 3 560 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +317 chr10 - 5559332 5568204 ENST00000545372.1 4 579 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +318 chr10 + 5566924 5568225 ENST00000315238.1 1 1302 ENSG00000178363.3 CALML3 0.000000 0.000000 +319 chr10 - 5566939 5567705 ENST00000442008.2 2 595 ENSG00000256462.1 RP11-116G8.5 0.000000 0.000000 +320 chr10 - 5592096 5592862 MSTRG.62.1 2 505 MSTRG.62 . 0.000000 0.000000 +321 chr10 - 5598987 5601960 MSTRG.63.1 3 464 MSTRG.63 . 0.000000 0.000000 +322 chr10 - 5636951 5638081 MSTRG.64.1 2 738 MSTRG.64 . 0.000000 0.000000 +323 chr10 - 5636954 5638081 ENST00000478294.1 2 697 MSTRG.64 RP13-463N16.6 0.000000 0.000000 +324 chr10 - 5650438 5652756 ENST00000425246.1 5 613 ENSG00000231483.1 RP11-336A10.5 0.000000 0.000000 +325 chr10 - 5658825 5660124 ENST00000427341.1 3 657 ENSG00000228951.1 RP11-336A10.4 0.000000 0.000000 +326 chr10 + 5666894 5667089 ENST00000441526.1 1 196 ENSG00000228685.1 RP11-336A10.7 0.000000 0.000000 +327 chr10 + 5673426 5673716 ENST00000495609.2 1 291 ENSG00000240577.2 RN7SL445P 0.000000 0.000000 +328 chr10 - 5680830 5683924 ENST00000493897.1 3 832 MSTRG.65 ASB13 2.350395 3.937907 +329 chr10 - 5680831 5708558 ENST00000357700.6 6 2716 MSTRG.65 ASB13 113.151024 189.575897 +330 chr10 - 5680831 5708558 ENST00000459912.1 7 2797 MSTRG.65 ASB13 10.155425 17.014639 +331 chr10 - 5680831 5708558 ENST00000479033.1 5 2565 MSTRG.65 ASB13 2.044660 3.425672 +332 chr10 - 5690935 5693531 ENST00000482921.1 2 489 MSTRG.65 ASB13 0.000000 0.000000 +333 chr10 + 5726801 5806473 ENST00000328090.5 21 9396 MSTRG.66 FAM208B 11.856711 19.865015 +334 chr10 + 5726801 5806473 MSTRG.66.1 24 9749 MSTRG.66 . 27.658834 46.340263 +335 chr10 + 5726801 5806473 MSTRG.66.2 23 9657 MSTRG.66 . 29.062733 48.692387 +336 chr10 + 5726801 5806473 MSTRG.66.3 21 9226 MSTRG.66 . 26.146238 43.806026 +337 chr10 + 5726801 5806473 MSTRG.66.4 24 9644 MSTRG.66 . 21.068443 35.298569 +338 chr10 + 5726801 5806473 MSTRG.66.5 20 9134 MSTRG.66 . 20.514400 34.370312 +339 chr10 + 5726801 5806473 MSTRG.66.6 22 9511 MSTRG.66 . 26.248936 43.978088 +340 chr10 + 5726801 5806473 MSTRG.66.7 23 9498 MSTRG.66 . 19.839966 33.240345 +341 chr10 + 5726905 5754502 ENST00000477043.1 3 514 MSTRG.66 FAM208B 0.000000 0.000000 +342 chr10 + 5726905 5756170 ENST00000473789.1 4 537 MSTRG.66 FAM208B 0.000000 0.000000 +343 chr10 + 5726911 5762631 ENST00000496681.1 4 522 MSTRG.66 FAM208B 0.000000 0.000000 +344 chr10 + 5726928 5762631 ENST00000480839.2 5 597 MSTRG.66 FAM208B 0.000000 0.000000 +345 chr10 + 5734779 5754881 ENST00000532424.1 4 479 MSTRG.66 FAM208B 0.000000 0.000000 +346 chr10 + 5741411 5751626 ENST00000482419.1 2 424 MSTRG.66 FAM208B 2.621253 4.391709 +347 chr10 + 5741456 5756170 ENST00000463468.1 4 560 MSTRG.66 FAM208B 0.000000 0.000000 +348 chr10 + 5751589 5756537 ENST00000527124.1 3 574 MSTRG.66 FAM208B 6.639783 11.124449 +349 chr10 - 5754137 5786030 ENST00000411512.2 2 736 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +350 chr10 - 5754383 5756386 ENST00000596567.1 2 945 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +351 chr10 + 5768789 5773166 ENST00000532080.1 3 912 MSTRG.66 FAM208B 0.000000 0.000000 +352 chr10 + 5772625 5782460 ENST00000380270.3 2 1422 MSTRG.66 FAM208B 0.000000 0.000000 +353 chr10 + 5800892 5803764 ENST00000487196.1 2 576 MSTRG.66 FAM208B 1.335764 2.237971 +354 chr10 + 5802803 5806473 ENST00000459693.1 2 2611 MSTRG.66 FAM208B 1.481355 2.481897 +355 chr10 - 5807186 5855512 ENST00000380191.4 11 2412 MSTRG.68 GDI2 2491.240967 4173.883789 +356 chr10 - 5807192 5811352 ENST00000479928.1 3 2499 MSTRG.68 GDI2 18.844467 31.572466 +357 chr10 - 5807812 5827944 ENST00000447751.1 6 893 MSTRG.68 GDI2 37.225334 62.368202 +358 chr10 - 5807884 5855512 ENST00000380132.4 12 1797 MSTRG.68 GDI2 18.558372 31.093134 +359 chr10 - 5807917 5855512 ENST00000380181.3 10 1546 MSTRG.68 GDI2 122.136681 204.630692 +360 chr10 - 5815805 5855512 ENST00000456041.1 7 1080 MSTRG.68 GDI2 17.078299 28.613384 +361 chr10 + 5818034 5818821 ENST00000603087.1 1 788 MSTRG.69 NRBF2P5 0.000000 0.000000 +362 chr10 - 5827829 5855512 ENST00000418688.1 4 756 MSTRG.68 GDI2 0.000000 0.000000 +363 chr10 - 5827945 5856292 ENST00000608581.1 5 634 MSTRG.68 GDI2 23.106449 38.713093 +364 chr10 - 5827969 5884095 ENST00000380127.1 7 584 MSTRG.68 GDI2 0.000000 0.000000 +365 chr10 - 5836871 5855512 ENST00000609712.1 5 739 MSTRG.68 GDI2 0.000000 0.000000 +366 chr10 + 5855610 5858572 MSTRG.70.1 1 2963 MSTRG.70 . 7.386975 12.376312 +367 chr10 + 5855948 5858572 ENST00000608273.1 2 2444 MSTRG.70 RP11-318E3.9 0.000000 0.000000 +368 chr10 - 5902878 5931954 MSTRG.71.1 8 3707 MSTRG.71 . 7.052813 11.816449 +369 chr10 - 5902878 5931954 MSTRG.71.2 9 3232 MSTRG.71 . 0.000000 0.000000 +370 chr10 - 5902878 5931954 MSTRG.71.3 9 3684 MSTRG.71 . 23.642553 39.611290 +371 chr10 - 5903580 5931954 ENST00000380094.5 8 2831 MSTRG.71 ANKRD16 5.282689 8.850742 +372 chr10 - 5903768 5904654 ENST00000430852.1 2 586 MSTRG.71 RP11-318E3.4 0.000000 0.000000 +373 chr10 - 5918136 5931954 MSTRG.71.6 8 2285 MSTRG.71 . 8.903865 14.917747 +374 chr10 - 5920050 5931954 ENST00000380092.4 7 1766 MSTRG.71 ANKRD16 6.879695 11.526403 +375 chr10 - 5920085 5931954 ENST00000191063.8 6 1652 MSTRG.71 ANKRD16 5.625590 9.425246 +376 chr10 - 5924666 5930030 ENST00000492368.1 4 838 MSTRG.71 ANKRD16 8.200189 13.738790 +377 chr10 + 5931535 5979556 ENST00000397269.3 22 3665 MSTRG.72 FBXO18 0.000000 0.000000 +378 chr10 + 5932194 5979556 ENST00000362091.4 21 3560 MSTRG.72 FBXO18 54.533562 91.366821 +379 chr10 + 5932211 5953091 ENST00000470089.1 5 1153 MSTRG.72 FBXO18 3.295147 5.520767 +380 chr10 + 5932211 5979168 MSTRG.72.3 22 3206 MSTRG.72 . 18.034912 30.216116 +381 chr10 + 5932243 5948595 ENST00000462507.1 4 917 MSTRG.72 FBXO18 2.434121 4.078184 +382 chr10 + 5932243 5969504 MSTRG.72.7 20 2993 MSTRG.72 . 30.223021 50.636360 +383 chr10 + 5932243 5979556 MSTRG.72.5 20 3355 MSTRG.72 . 105.089821 176.069962 +384 chr10 + 5932243 5979556 MSTRG.72.6 23 4178 MSTRG.72 . 49.749100 83.350815 +385 chr10 + 5933788 5969504 MSTRG.72.9 19 8474 MSTRG.72 . 33.131962 55.510075 +386 chr10 + 5936349 5979556 ENST00000379999.5 22 3702 MSTRG.72 FBXO18 5.764652 9.658234 +387 chr10 + 5945129 5951257 ENST00000469009.1 5 943 MSTRG.72 FBXO18 1.554375 2.604237 +388 chr10 + 5948469 5951441 ENST00000494526.1 3 578 MSTRG.72 FBXO18 4.487355 7.518221 +389 chr10 + 5956141 5957907 ENST00000460453.1 2 634 MSTRG.72 FBXO18 12.558003 21.039976 +390 chr10 + 5959025 5959639 ENST00000489042.1 2 533 MSTRG.72 FBXO18 1.497851 2.509535 +391 chr10 + 5963309 5966471 ENST00000475867.1 3 1022 MSTRG.72 FBXO18 3.262033 5.465287 +392 chr10 + 5963317 5979168 ENST00000461504.1 9 912 MSTRG.72 FBXO18 8.876598 14.872063 +393 chr10 + 5965534 5969504 ENST00000485290.1 4 557 MSTRG.72 FBXO18 1.246529 2.088464 +394 chr10 + 5967227 5969504 ENST00000496013.1 2 336 MSTRG.72 FBXO18 1.040001 1.742442 +395 chr10 + 5967374 5970636 ENST00000479433.1 3 527 MSTRG.72 FBXO18 1.272447 2.131888 +396 chr10 + 5967374 5971829 ENST00000470353.1 3 681 MSTRG.72 FBXO18 3.521534 5.900061 +397 chr10 - 5976233 5987876 ENST00000397264.4 2 3499 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +398 chr10 - 5977257 5987876 MSTRG.73.2 2 615 MSTRG.73 . 0.000000 0.000000 +399 chr10 + 5978596 5979556 ENST00000481029.1 2 486 MSTRG.72 FBXO18 0.000000 0.000000 +400 chr10 - 5985453 5987876 ENST00000448685.1 2 685 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +401 chr10 - 5985467 5987876 ENST00000454321.1 2 545 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +402 chr10 - 5990855 6002530 ENST00000435171.2 4 659 MSTRG.74 IL15RA 0.000000 0.000000 +403 chr10 - 5990898 6010891 MSTRG.74.2 6 5050 MSTRG.74 . 0.000000 0.000000 +404 chr10 - 5990898 6010891 MSTRG.74.3 7 5029 MSTRG.74 . 0.000000 0.000000 +405 chr10 - 5990938 6019177 MSTRG.74.5 6 5123 MSTRG.74 . 0.000000 0.000000 +406 chr10 - 5990938 6020150 MSTRG.74.4 8 5520 MSTRG.74 . 0.000000 0.000000 +407 chr10 - 5994142 6020150 MSTRG.74.6 7 2163 MSTRG.74 . 1.261035 2.112768 +408 chr10 - 5994334 6019739 ENST00000379977.3 7 1812 MSTRG.74 IL15RA 0.000000 0.000000 +409 chr10 - 5994335 6019739 ENST00000397248.2 7 1811 MSTRG.74 IL15RA 0.000000 0.000000 +410 chr10 - 5994335 6019739 ENST00000397251.3 6 1616 MSTRG.74 IL15RA 0.000000 0.000000 +411 chr10 - 5994344 6020150 ENST00000525219.2 7 1841 MSTRG.74 IL15RA 0.000000 0.000000 +412 chr10 - 5994349 6020150 ENST00000534292.1 7 1836 MSTRG.74 IL15RA 0.000000 0.000000 +413 chr10 - 5994356 6020150 ENST00000379972.2 6 1631 MSTRG.74 IL15RA 0.000000 0.000000 +414 chr10 - 5994356 6020150 ENST00000532948.1 6 1730 MSTRG.74 IL15RA 0.000000 0.000000 +415 chr10 - 5994756 6019739 ENST00000528354.1 6 1291 MSTRG.74 IL15RA 0.000000 0.000000 +416 chr10 - 5994784 6005801 ENST00000447291.1 5 912 MSTRG.74 IL15RA 0.000000 0.000000 +417 chr10 - 5994861 6020150 ENST00000379974.1 5 1030 MSTRG.74 IL15RA 0.000000 0.000000 +418 chr10 - 5995008 6008302 ENST00000532039.1 6 679 MSTRG.74 IL15RA 0.000000 0.000000 +419 chr10 - 5995014 6019739 ENST00000397250.2 5 838 MSTRG.74 IL15RA 0.000000 0.000000 +420 chr10 - 5995115 6019739 ENST00000379971.1 5 857 MSTRG.74 IL15RA 0.000000 0.000000 +421 chr10 - 5995223 6019739 ENST00000397255.3 7 1043 MSTRG.74 IL15RA 0.000000 0.000000 +422 chr10 - 5995223 6019739 ENST00000530685.1 6 944 MSTRG.74 IL15RA 0.000000 0.000000 +423 chr10 - 5998341 6020150 ENST00000397246.3 7 1180 MSTRG.74 IL15RA 0.000000 0.000000 +424 chr10 - 6001717 6019739 ENST00000429135.2 4 801 MSTRG.74 IL15RA 0.000000 0.000000 +425 chr10 - 6002358 6019177 ENST00000453922.1 4 730 MSTRG.74 IL15RA 0.000000 0.000000 +426 chr10 - 6052652 6104288 ENST00000379959.3 8 3176 ENSG00000134460.11 IL2RA 0.000000 0.000000 +427 chr10 - 6054034 6104272 ENST00000379954.1 7 1562 ENSG00000134460.11 IL2RA 0.000000 0.000000 +428 chr10 - 6054760 6104253 ENST00000256876.6 8 1006 ENSG00000134460.11 IL2RA 0.000000 0.000000 +429 chr10 - 6059017 6059157 ENST00000516113.1 1 141 ENSG00000251922.1 SNORA14 0.000000 0.000000 +430 chr10 - 6061416 6067964 ENST00000447847.1 3 326 ENSG00000134460.11 IL2RA 0.000000 0.000000 +431 chr10 + 6067941 6078390 ENST00000440436.1 3 480 ENSG00000229664.1 RP11-536K7.5 0.000000 0.000000 +432 chr10 - 6113477 6113881 ENST00000397237.2 1 405 ENSG00000214015.3 RP11-414H17.2 0.000000 0.000000 +433 chr10 + 6130950 6159420 ENST00000379888.4 12 3332 MSTRG.75 RBM17 120.847649 202.471008 +434 chr10 + 6130962 6159420 MSTRG.75.2 12 4027 MSTRG.75 . 231.442871 387.764862 +435 chr10 + 6131017 6154324 ENST00000437845.2 7 873 MSTRG.75 RBM17 0.000000 0.000000 +436 chr10 + 6131034 6152090 ENST00000432931.1 7 842 MSTRG.75 RBM17 32.650211 54.702934 +437 chr10 + 6131309 6159420 ENST00000446108.1 12 3751 MSTRG.75 RBM17 15.132792 25.353838 +438 chr10 + 6138873 6152090 ENST00000418631.1 6 860 MSTRG.75 RBM17 6.305564 10.564491 +439 chr10 + 6146909 6148340 ENST00000467214.1 2 389 MSTRG.75 RBM17 11.557898 19.364374 +440 chr10 + 6146934 6154664 ENST00000447032.1 5 916 MSTRG.75 RBM17 78.565742 131.630905 +441 chr10 + 6150451 6154664 ENST00000481147.1 3 889 MSTRG.75 RBM17 17.076075 28.609659 +442 chr10 + 6154665 6159420 ENST00000476706.1 5 2618 MSTRG.75 RBM17 13.311913 22.303093 +443 chr10 + 6155326 6159420 ENST00000465906.1 3 2537 MSTRG.75 RBM17 15.643809 26.210009 +444 chr10 + 6155870 6159420 ENST00000467080.1 2 2460 MSTRG.75 RBM17 2.407714 4.033941 +445 chr10 + 6156110 6159420 ENST00000496762.1 2 3170 MSTRG.75 RBM17 8.261183 13.840981 +446 chr10 + 6171977 6172984 MSTRG.76.1 2 758 MSTRG.76 . 0.000000 0.000000 +447 chr10 + 6186881 6277495 ENST00000536985.1 12 3923 MSTRG.77 PFKFB3 2.288423 3.834078 +448 chr10 + 6186897 6277495 ENST00000379789.4 15 4157 MSTRG.77 PFKFB3 78.530228 131.571396 +449 chr10 + 6188279 6277495 ENST00000540253.1 15 4258 MSTRG.77 PFKFB3 0.000000 0.000000 +450 chr10 + 6191586 6191903 ENST00000364711.1 1 318 MSTRG.78 RN7SKP78 0.000000 0.000000 +451 chr10 + 6194159 6194240 ENST00000577482.1 1 82 MSTRG.79 MIR3155A 0.000000 0.000000 +452 chr10 - 6239575 6244656 ENST00000427630.1 2 438 MSTRG.80 RP11-414H17.5 1.136986 1.904933 +453 chr10 + 6244829 6270258 ENST00000317350.4 15 2010 MSTRG.77 PFKFB3 0.000000 0.000000 +454 chr10 + 6244829 6270258 ENST00000461744.1 16 2098 MSTRG.77 PFKFB3 0.000000 0.000000 +455 chr10 + 6244829 6277495 ENST00000379785.1 17 4623 MSTRG.77 PFKFB3 0.000000 0.000000 +456 chr10 + 6244829 6277495 ENST00000467491.1 18 4711 MSTRG.77 PFKFB3 0.000000 0.000000 +457 chr10 + 6244829 6277495 ENST00000477914.1 16 4636 MSTRG.77 PFKFB3 5.020458 8.411394 +458 chr10 + 6244829 6277495 ENST00000490474.1 17 4659 MSTRG.77 PFKFB3 3.115067 5.219057 +459 chr10 + 6244840 6273277 ENST00000379782.3 16 1974 MSTRG.77 PFKFB3 0.000000 0.000000 +460 chr10 + 6244863 6277495 ENST00000360521.2 16 4537 MSTRG.77 PFKFB3 29.592476 49.579933 +461 chr10 + 6244894 6277495 ENST00000379775.4 15 4483 MSTRG.77 PFKFB3 90.426765 151.503143 +462 chr10 + 6263367 6277495 ENST00000450232.1 5 3020 MSTRG.77 PFKFB3 0.000000 0.000000 +463 chr10 + 6264671 6268410 ENST00000487989.1 4 661 MSTRG.77 PFKFB3 1.343647 2.251178 +464 chr10 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RP11-554I8.1 0.000000 0.000000 +486 chr10 + 6779344 6780988 ENST00000417112.1 2 917 MSTRG.85 RP11-554I8.2 3.994002 6.691646 +487 chr10 - 6816341 6821132 MSTRG.86.1 2 617 MSTRG.86 . 0.000000 0.000000 +488 chr10 + 6821558 6884868 MSTRG.87.1 4 5454 MSTRG.87 . 0.000000 0.000000 +489 chr10 + 6821560 6884868 ENST00000436383.1 5 3070 MSTRG.87 LINC00707 0.000000 0.000000 +490 chr10 - 6867825 6868186 ENST00000451996.1 1 362 MSTRG.88 AL392086.1 0.000000 0.000000 +491 chr10 - 6933419 6962434 ENST00000457632.1 3 299 ENSG00000234248.1 RP11-799O21.2 0.000000 0.000000 +492 chr10 - 7100287 7100507 MSTRG.89.1 1 221 MSTRG.89 . 3.938914 6.599349 +493 chr10 + 7139114 7139637 ENST00000420049.1 2 436 ENSG00000223581.1 RP11-393K12.2 0.000000 0.000000 +494 chr10 + 7196082 7196198 ENST00000604136.1 1 117 ENSG00000270811.1 RP11-393K12.4 0.000000 0.000000 +495 chr10 - 7200586 7451303 ENST00000361972.4 21 7922 MSTRG.90 SFMBT2 0.000000 0.000000 +496 chr10 - 7200586 7452983 MSTRG.90.1 21 7852 MSTRG.90 . 18.743425 31.403177 +497 chr10 - 7200586 7452983 MSTRG.90.2 21 8043 MSTRG.90 . 24.718126 41.413334 +498 chr10 - 7200600 7452983 MSTRG.90.4 21 8049 MSTRG.90 . 0.000000 0.000000 +499 chr10 - 7204249 7453450 ENST00000397167.1 21 4363 MSTRG.90 SFMBT2 0.000000 0.000000 +500 chr10 - 7326144 7453450 ENST00000379713.3 5 2404 MSTRG.90 SFMBT2 3.717030 6.227600 +501 chr10 - 7337068 7337252 ENST00000421389.1 1 185 MSTRG.91 RP5-1092K5.2 0.000000 0.000000 +502 chr10 - 7390104 7450707 ENST00000379711.2 5 692 MSTRG.90 SFMBT2 0.000000 0.000000 +503 chr10 - 7390249 7453450 ENST00000397160.3 5 678 MSTRG.90 SFMBT2 0.000000 0.000000 +504 chr10 - 7487520 7513904 ENST00000420395.1 4 557 ENSG00000232591.1 RP5-1031D4.2 0.000000 0.000000 +505 chr10 - 7528665 7528771 ENST00000384722.1 1 107 ENSG00000207453.1 RNU6-535P 0.000000 0.000000 +506 chr10 + 7575169 7578527 ENST00000414631.1 3 714 ENSG00000230121.1 RP11-385N23.1 0.000000 0.000000 +507 chr10 - 7601232 7708961 ENST00000256861.6 14 6749 MSTRG.92 ITIH5 0.000000 0.000000 +508 chr10 - 7601756 7708961 ENST00000397146.2 12 2194 MSTRG.92 ITIH5 0.000000 0.000000 +509 chr10 - 7604386 7664440 ENST00000298441.6 10 5734 MSTRG.92 ITIH5 0.000000 0.000000 +510 chr10 - 7605045 7708961 ENST00000446830.2 14 2936 MSTRG.92 ITIH5 0.000000 0.000000 +511 chr10 - 7608000 7612363 ENST00000473591.1 3 782 MSTRG.92 ITIH5 0.000000 0.000000 +512 chr10 - 7611125 7618854 ENST00000492668.1 3 1116 MSTRG.92 ITIH5 0.000000 0.000000 +513 chr10 - 7613368 7682818 ENST00000434980.1 9 2727 MSTRG.92 ITIH5 0.000000 0.000000 +514 chr10 - 7613368 7708961 ENST00000397145.2 12 3132 MSTRG.92 ITIH5 0.000000 0.000000 +515 chr10 - 7614735 7620667 ENST00000468389.1 3 1393 MSTRG.92 ITIH5 0.000000 0.000000 +516 chr10 - 7614735 7664440 ENST00000476417.1 6 6945 MSTRG.92 ITIH5 0.000000 0.000000 +517 chr10 - 7618855 7659245 ENST00000461751.1 7 999 MSTRG.92 ITIH5 0.000000 0.000000 +518 chr10 + 7745232 7791483 ENST00000358415.4 21 3193 ENSG00000151655.13 ITIH2 0.000000 0.000000 +519 chr10 + 7745309 7755346 ENST00000473227.1 5 654 ENSG00000151655.13 ITIH2 0.000000 0.000000 +520 chr10 + 7745331 7762864 ENST00000480387.1 6 573 ENSG00000151655.13 ITIH2 0.000000 0.000000 +521 chr10 + 7745343 7763660 ENST00000429820.1 7 767 ENSG00000151655.13 ITIH2 0.000000 0.000000 +522 chr10 + 7745363 7791302 ENST00000379587.4 20 2848 ENSG00000151655.13 ITIH2 0.000000 0.000000 +523 chr10 + 7771828 7774436 ENST00000477751.1 3 591 ENSG00000151655.13 ITIH2 0.000000 0.000000 +524 chr10 - 7792925 7829990 ENST00000379562.4 13 6394 MSTRG.93 KIN 26.005911 43.570919 +525 chr10 - 7795188 7808066 ENST00000498098.1 6 817 MSTRG.93 KIN 0.000000 0.000000 +526 chr10 - 7795188 7829990 MSTRG.93.2 14 3782 MSTRG.93 . 4.101240 6.871315 +527 chr10 - 7795188 7829990 MSTRG.93.3 13 3687 MSTRG.93 . 3.962313 6.638553 +528 chr10 - 7795188 7829990 MSTRG.93.4 13 3684 MSTRG.93 . 3.908410 6.548243 +529 chr10 - 7795276 7829990 ENST00000535925.1 14 1618 MSTRG.93 KIN 25.606524 42.901775 +530 chr10 - 7797777 7808347 ENST00000463666.1 6 699 MSTRG.93 KIN 0.000000 0.000000 +531 chr10 - 7797798 7808347 ENST00000471320.1 5 910 MSTRG.93 KIN 1.344775 2.253068 +532 chr10 - 7801234 7829990 ENST00000543003.1 11 1737 MSTRG.93 KIN 5.103407 8.550369 +533 chr10 - 7803196 7816854 ENST00000460089.1 6 626 MSTRG.93 KIN 1.347414 2.257489 +534 chr10 + 7830092 7849778 ENST00000356708.7 10 1163 MSTRG.94 ATP5C1 458.070923 767.462830 +535 chr10 + 7830110 7849778 ENST00000493053.1 9 1110 MSTRG.94 ATP5C1 29.466024 49.368073 +536 chr10 + 7830122 7838551 ENST00000462760.1 2 573 MSTRG.94 ATP5C1 3.907558 6.546815 +537 chr10 + 7830138 7839009 ENST00000460362.1 3 565 MSTRG.94 ATP5C1 1.773284 2.971002 +538 chr10 + 7830140 7844838 ENST00000541227.1 7 907 MSTRG.94 ATP5C1 5.596796 9.377004 +539 chr10 + 7830140 7849778 ENST00000335698.4 9 1078 MSTRG.94 ATP5C1 2278.573975 3817.576660 +540 chr10 + 7830142 7849778 ENST00000465936.1 4 314 MSTRG.94 ATP5C1 0.000000 0.000000 +541 chr10 + 7830147 7844388 ENST00000460820.2 7 763 MSTRG.94 ATP5C1 0.000000 0.000000 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RP11-379F12.3 0.000000 0.000000 +553 chr10 - 8094206 8095412 ENST00000458727.1 2 820 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +554 chr10 + 8095567 8097859 ENST00000481743.1 2 785 MSTRG.97 GATA3 0.000000 0.000000 +555 chr10 + 8095567 8117161 MSTRG.97.1 6 3054 MSTRG.97 . 0.000000 0.000000 +556 chr10 + 8095593 8117161 MSTRG.97.3 6 3025 MSTRG.97 . 0.000000 0.000000 +557 chr10 + 8096656 8117161 ENST00000379328.3 6 3078 MSTRG.97 GATA3 3.694422 6.189722 +558 chr10 + 8096769 8117161 ENST00000346208.3 6 2962 MSTRG.97 GATA3 1.312144 2.198397 +559 chr10 + 8100362 8117161 ENST00000461472.1 3 2029 MSTRG.97 GATA3 0.000000 0.000000 +560 chr10 + 8203223 8204155 ENST00000451976.1 1 933 ENSG00000225053.1 PRPF38AP1 0.000000 0.000000 +561 chr10 - 8301294 8302767 ENST00000454056.1 2 365 ENSG00000232170.1 LINC00708 0.000000 0.000000 +562 chr10 - 8301294 8310268 ENST00000428165.1 5 916 ENSG00000232170.1 LINC00708 0.000000 0.000000 +563 chr10 + 8340860 8343630 ENST00000413941.1 2 901 ENSG00000226861.1 RP5-1119O21.2 0.000000 0.000000 +564 chr10 + 8442823 8503826 ENST00000413286.1 4 430 ENSG00000226990.1 RP11-543F8.2 0.000000 0.000000 +565 chr10 + 8514682 8514915 ENST00000603398.1 1 234 ENSG00000271251.1 RP11-543F8.3 0.000000 0.000000 +566 chr10 - 8555650 8557069 ENST00000451609.1 1 1420 ENSG00000213771.3 KRT8P37 0.000000 0.000000 +567 chr10 + 8661896 8662571 ENST00000425516.1 1 676 ENSG00000236420.1 CHCHD3P1 0.000000 0.000000 +568 chr10 - 8698679 8698794 ENST00000391203.1 1 116 ENSG00000212505.1 RNA5SP299 0.000000 0.000000 +569 chr10 + 8765973 8766251 ENST00000605632.1 1 279 ENSG00000270234.1 RP11-575N15.1 0.000000 0.000000 +570 chr10 + 8939952 8956559 ENST00000447297.1 4 366 ENSG00000234752.1 RP11-428L9.1 0.000000 0.000000 +571 chr10 + 9012088 9015431 ENST00000456526.1 2 677 ENSG00000223808.1 RP11-428L9.2 0.000000 0.000000 +572 chr10 + 9317796 9329020 ENST00000458168.1 2 494 ENSG00000230014.1 LINC00709 0.000000 0.000000 +573 chr10 - 9763926 9766379 ENST00000450068.1 1 2454 ENSG00000235838.1 HSP90AB7P 0.000000 0.000000 +574 chr10 - 9800746 9801200 ENST00000419836.1 2 344 ENSG00000228636.1 RP5-1051H14.2 0.000000 0.000000 +575 chr10 + 10100685 10105465 ENST00000429539.1 4 575 ENSG00000224788.1 RP5-933E2.1 0.000000 0.000000 +576 chr10 + 10216193 10216528 ENST00000535261.1 1 336 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +577 chr10 + 10216193 10216540 ENST00000439303.1 1 348 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +578 chr10 + 10274574 10274675 ENST00000363979.1 1 102 ENSG00000200849.1 Y_RNA 0.000000 0.000000 +579 chr10 - 10299132 10299429 ENST00000606426.1 1 298 ENSG00000272436.1 CUX2P1 0.000000 0.000000 +580 chr10 - 10407143 10408450 ENST00000455871.1 2 335 ENSG00000234306.1 RP11-271F18.1 0.000000 0.000000 +581 chr10 - 10461501 10504312 ENST00000602311.1 4 505 ENSG00000270111.1 RP11-271F18.4 0.000000 0.000000 +582 chr10 - 10818186 10818624 ENST00000448495.1 1 439 ENSG00000228997.1 RP1-186E20.1 0.000000 0.000000 +583 chr10 - 10826400 10836959 ENST00000415590.2 4 656 MSTRG.98 SFTA1P 0.000000 0.000000 +584 chr10 - 10826400 10836959 ENST00000602763.1 4 636 MSTRG.98 SFTA1P 0.000000 0.000000 +585 chr10 - 10826401 10836959 ENST00000434919.2 3 481 MSTRG.98 SFTA1P 0.000000 0.000000 +586 chr10 - 10826402 10836959 ENST00000446372.2 4 775 MSTRG.98 SFTA1P 0.000000 0.000000 +587 chr10 - 10826413 10836959 MSTRG.98.5 4 784 MSTRG.98 . 0.000000 0.000000 +588 chr10 - 10969021 10988765 ENST00000600516.1 6 659 ENSG00000229240.3 LINC00710 0.000000 0.000000 +589 chr10 - 10976487 10994058 ENST00000428520.2 6 1460 ENSG00000229240.3 LINC00710 0.000000 0.000000 +590 chr10 - 10976903 10978626 ENST00000441855.1 2 514 ENSG00000229240.3 LINC00710 0.000000 0.000000 +591 chr10 - 10988010 10994143 ENST00000596092.1 5 1025 ENSG00000229240.3 LINC00710 0.000000 0.000000 +592 chr10 - 10988011 10994197 ENST00000601050.2 6 994 ENSG00000229240.3 LINC00710 0.000000 0.000000 +593 chr10 - 10988821 10994058 ENST00000450174.2 3 873 ENSG00000229240.3 LINC00710 0.000000 0.000000 +594 chr10 - 10989127 10994129 ENST00000598573.1 2 666 ENSG00000229240.3 LINC00710 0.000000 0.000000 +595 chr10 + 11002114 11012779 ENST00000420825.1 3 537 ENSG00000231496.1 RP1-251M9.2 0.000000 0.000000 +596 chr10 + 11047259 11378666 ENST00000379261.4 14 9233 ENSG00000048740.13 CELF2 0.000000 0.000000 +597 chr10 + 11047351 11373245 ENST00000416382.2 14 2398 ENSG00000048740.13 CELF2 0.000000 0.000000 +598 chr10 - 11052127 11053082 ENST00000437825.1 2 244 ENSG00000228027.1 RP1-251M9.3 0.000000 0.000000 +599 chr10 + 11059893 11378666 ENST00000450189.1 15 7982 ENSG00000048740.13 CELF2 0.000000 0.000000 +600 chr10 + 11060053 11373245 ENST00000542579.1 14 2437 ENSG00000048740.13 CELF2 0.000000 0.000000 +601 chr10 + 11060106 11373245 ENST00000399850.3 14 2384 ENSG00000048740.13 CELF2 0.000000 0.000000 +602 chr10 + 11060106 11373245 ENST00000417956.2 14 2378 ENSG00000048740.13 CELF2 0.000000 0.000000 +603 chr10 + 11072297 11072831 ENST00000428853.2 2 433 ENSG00000229206.2 RP11-397O4.1 0.000000 0.000000 +604 chr10 - 11117094 11140436 ENST00000432370.2 4 853 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +605 chr10 - 11139277 11140123 ENST00000420634.1 2 144 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +606 chr10 + 11206993 11376357 ENST00000354440.2 13 7121 ENSG00000048740.13 CELF2 0.000000 0.000000 +607 chr10 + 11206993 11378666 ENST00000427450.1 15 8036 ENSG00000048740.13 CELF2 0.000000 0.000000 +608 chr10 + 11206993 11378674 ENST00000315874.4 14 8080 ENSG00000048740.13 CELF2 0.000000 0.000000 +609 chr10 + 11207103 11372602 ENST00000608830.1 14 1892 ENSG00000048740.13 CELF2 0.000000 0.000000 +610 chr10 + 11207447 11371252 ENST00000609870.1 10 1549 ENSG00000048740.13 CELF2 0.000000 0.000000 +611 chr10 + 11207447 11373240 ENST00000609692.1 12 2210 ENSG00000048740.13 CELF2 0.000000 0.000000 +612 chr10 + 11207449 11371242 ENST00000354897.3 13 1754 ENSG00000048740.13 CELF2 0.000000 0.000000 +613 chr10 + 11207491 11371055 ENST00000537122.1 11 1406 ENSG00000048740.13 CELF2 0.000000 0.000000 +614 chr10 - 11210885 11213339 ENST00000417273.1 2 430 ENSG00000230322.1 RP3-323N1.2 0.000000 0.000000 +615 chr10 - 11358797 11361847 ENST00000379256.3 2 2468 ENSG00000181800.5 CELF2-AS1 0.000000 0.000000 +616 chr10 - 11495945 11653753 ENST00000609104.1 15 11377 MSTRG.99 USP6NL 67.251740 112.675156 +617 chr10 - 11502509 11574274 ENST00000277575.5 14 4512 MSTRG.99 USP6NL 0.000000 0.000000 +618 chr10 - 11502509 11615840 ENST00000379237.2 14 4650 MSTRG.99 USP6NL 3.277443 5.491105 +619 chr10 - 11605186 11615604 ENST00000443016.1 2 2600 MSTRG.99 USP6NL 16.597433 27.807732 +620 chr10 - 11606126 11615840 ENST00000609853.1 2 1748 MSTRG.99 USP6NL 0.000000 0.000000 +621 chr10 - 11606126 11653753 ENST00000606752.1 3 1911 MSTRG.99 USP6NL 27.565933 46.184616 +622 chr10 + 11653304 11654226 ENST00000604634.1 1 923 MSTRG.100 RP11-138I18.1 0.000000 0.000000 +623 chr10 + 11721674 11722513 ENST00000604086.1 1 840 MSTRG.101 RP11-138I18.2 0.000000 0.000000 +624 chr10 + 11784365 11806069 ENST00000379215.4 5 1649 MSTRG.102 ECHDC3 32.252369 54.036381 +625 chr10 + 11784365 11806069 ENST00000496136.1 6 1767 MSTRG.102 ECHDC3 0.000000 0.000000 +626 chr10 + 11784445 11797607 ENST00000420401.1 4 881 MSTRG.102 ECHDC3 1.697522 2.844069 +627 chr10 + 11789274 11806069 ENST00000422887.1 4 1342 MSTRG.102 ECHDC3 26.480177 44.365513 +628 chr10 + 11789449 11800341 ENST00000495787.1 3 3117 MSTRG.102 ECHDC3 13.938853 23.353483 +629 chr10 + 11865338 11908782 ENST00000474155.1 4 735 MSTRG.103 PROSER2 3.931592 6.587082 +630 chr10 + 11865397 11914276 ENST00000277570.5 4 3333 MSTRG.103 PROSER2 31.986185 53.590408 +631 chr10 + 11873682 11908782 ENST00000444604.1 3 612 MSTRG.103 PROSER2 0.000000 0.000000 +632 chr10 - 11886804 11936699 MSTRG.104.1 5 7842 MSTRG.104 . 50.283039 84.245392 +633 chr10 - 11886873 11936699 MSTRG.104.2 7 8043 MSTRG.104 . 19.243805 32.241524 +634 chr10 - 11891612 11936699 ENST00000445498.1 6 3141 MSTRG.104 PROSER2-AS1 8.938776 14.976235 +635 chr10 - 11899288 11916794 ENST00000453242.1 4 475 MSTRG.104 PROSER2-AS1 0.000000 0.000000 +636 chr10 + 11911643 11914276 ENST00000379200.1 1 2634 MSTRG.103 PROSER2 0.000000 0.000000 +637 chr10 - 11962021 12077896 ENST00000356352.2 21 5569 MSTRG.105 UPF2 0.000000 0.000000 +638 chr10 - 11962021 12084833 ENST00000357604.5 22 5193 MSTRG.105 UPF2 116.420662 195.053940 +639 chr10 - 11962022 12085169 ENST00000397053.2 22 5369 MSTRG.105 UPF2 59.483418 99.659927 +640 chr10 + 11965180 11965287 ENST00000516148.1 1 108 MSTRG.106 RNU6-1095P 0.000000 0.000000 +641 chr10 - 12077058 12085169 ENST00000460569.1 2 640 MSTRG.105 UPF2 0.000000 0.000000 +642 chr10 + 12110960 12165505 MSTRG.107.1 16 5286 MSTRG.107 . 10.195840 17.082352 +643 chr10 + 12110971 12165505 ENST00000263035.4 17 5440 MSTRG.107 DHTKD1 190.466797 319.112579 +644 chr10 + 12111023 12133683 ENST00000437298.1 5 974 MSTRG.107 DHTKD1 0.000000 0.000000 +645 chr10 + 12123523 12139995 ENST00000465617.1 4 811 MSTRG.107 DHTKD1 0.000000 0.000000 +646 chr10 + 12131174 12136300 ENST00000415935.1 3 482 MSTRG.107 DHTKD1 0.000000 0.000000 +647 chr10 + 12136259 12155063 ENST00000448829.1 6 822 MSTRG.107 DHTKD1 0.000000 0.000000 +648 chr10 - 12158279 12158378 ENST00000606801.1 1 100 MSTRG.108 U6 0.000000 0.000000 +649 chr10 + 12160778 12162358 ENST00000479283.1 2 318 MSTRG.107 DHTKD1 1.051084 1.761011 +650 chr10 + 12171636 12197404 ENST00000379051.1 7 708 MSTRG.109 SEC61A2 3.906880 6.545679 +651 chr10 + 12171636 12207411 MSTRG.109.1 12 2481 MSTRG.109 . 35.330021 59.192749 +652 chr10 + 12171640 12207411 ENST00000379033.3 11 2470 MSTRG.109 SEC61A2 10.450098 17.508341 +653 chr10 + 12171664 12207411 MSTRG.109.4 11 2358 MSTRG.109 . 40.080841 67.152390 +654 chr10 + 12171665 12200104 ENST00000441368.1 7 833 MSTRG.109 SEC61A2 0.000000 0.000000 +655 chr10 + 12171693 12211960 ENST00000475268.1 13 2183 MSTRG.109 SEC61A2 1.593289 2.669434 +656 chr10 + 12171698 12207411 ENST00000298428.9 12 2478 MSTRG.109 SEC61A2 69.107765 115.784775 +657 chr10 + 12171698 12211960 ENST00000495368.1 14 2311 MSTRG.109 SEC61A2 4.600202 7.707288 +658 chr10 + 12171700 12211960 ENST00000304267.8 12 2035 MSTRG.109 SEC61A2 6.475922 10.849913 +659 chr10 + 12171701 12200104 ENST00000472221.1 8 907 MSTRG.109 SEC61A2 3.247343 5.440675 +660 chr10 + 12171726 12207411 ENST00000379020.4 11 2252 MSTRG.109 SEC61A2 3.527046 5.909296 +661 chr10 + 12171732 12197309 ENST00000379017.3 7 2090 MSTRG.109 SEC61A2 22.965366 38.476719 +662 chr10 - 12172759 12172815 ENST00000584402.1 1 57 MSTRG.110 MIR548AK 0.000000 0.000000 +663 chr10 + 12178108 12191766 ENST00000457034.1 3 314 MSTRG.109 SEC61A2 0.000000 0.000000 +664 chr10 + 12185139 12200104 ENST00000418772.1 4 496 MSTRG.109 SEC61A2 0.000000 0.000000 +665 chr10 + 12187662 12187765 ENST00000458754.1 1 104 MSTRG.111 snoU13 1.250137 2.094509 +666 chr10 + 12191855 12207411 ENST00000419021.1 5 1643 MSTRG.109 SEC61A2 1.182827 1.981736 +667 chr10 + 12199018 12200284 ENST00000466451.1 2 427 MSTRG.109 SEC61A2 3.098673 5.191590 +668 chr10 - 12207324 12238143 ENST00000491614.1 10 3453 MSTRG.112 NUDT5 376.547943 630.877319 +669 chr10 - 12209575 12238143 ENST00000378937.3 11 1241 MSTRG.112 NUDT5 26.488857 44.380054 +670 chr10 - 12209576 12238143 ENST00000537776.1 10 1201 MSTRG.112 NUDT5 5.959153 9.984106 +671 chr10 - 12209671 12238143 ENST00000378952.3 11 1201 MSTRG.112 NUDT5 36.042709 60.386810 +672 chr10 - 12209737 12221131 ENST00000476462.1 6 622 MSTRG.112 NUDT5 6.479722 10.856279 +673 chr10 - 12211721 12238143 ENST00000378940.3 10 1401 MSTRG.112 NUDT5 71.590584 119.944557 +674 chr10 - 12212231 12238143 ENST00000378927.3 8 1580 MSTRG.112 NUDT5 55.255821 92.576912 +675 chr10 - 12214489 12215812 ENST00000498825.1 2 473 MSTRG.112 NUDT5 13.858033 23.218077 +676 chr10 - 12219842 12238143 ENST00000444732.1 5 709 MSTRG.112 NUDT5 1.952771 3.271719 +677 chr10 + 12237964 12272995 ENST00000429258.2 8 664 MSTRG.113 CDC123 7.657801 12.830061 +678 chr10 + 12237965 12292588 ENST00000281141.4 13 1543 MSTRG.113 CDC123 1090.450073 1826.965820 +679 chr10 + 12238129 12291717 ENST00000455773.3 11 971 MSTRG.113 CDC123 270.006165 452.374695 +680 chr10 + 12238195 12240875 ENST00000467016.1 2 296 MSTRG.113 CDC123 0.000000 0.000000 +681 chr10 + 12238222 12292588 ENST00000378900.2 12 1163 MSTRG.113 CDC123 25.249876 42.304237 +682 chr10 + 12238231 12279265 ENST00000442050.1 8 606 MSTRG.113 CDC123 2.071400 3.470472 +683 chr10 + 12238231 12292588 MSTRG.113.6 11 1052 MSTRG.113 . 27.256325 45.665890 +684 chr10 + 12259413 12292588 ENST00000498747.1 9 950 MSTRG.113 CDC123 1.455720 2.438948 +685 chr10 + 12272947 12292588 ENST00000440613.1 6 685 MSTRG.113 CDC123 4.775619 8.001185 +686 chr10 - 12286750 12289107 ENST00000598961.1 2 1827 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +687 chr10 - 12287627 12289844 ENST00000421657.1 2 1914 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +688 chr10 + 12288053 12292588 ENST00000497963.1 2 1233 MSTRG.113 CDC123 33.331200 55.843880 +689 chr10 + 12303670 12303926 ENST00000582360.1 1 257 ENSG00000265824.1 RN7SL232P 0.000000 0.000000 +690 chr10 - 12370135 12370388 ENST00000583190.1 1 254 ENSG00000264036.1 RN7SL198P 0.000000 0.000000 +691 chr10 + 12391481 12877545 ENST00000378847.3 11 8154 MSTRG.115 CAMK1D 18.624592 31.204081 +692 chr10 + 12391481 12877545 MSTRG.115.1 12 8134 MSTRG.115 . 18.460251 30.928740 +693 chr10 + 12391651 12708948 ENST00000487696.1 2 473 MSTRG.115 CAMK1D 0.000000 0.000000 +694 chr10 + 12391732 12869446 ENST00000378845.1 10 2882 MSTRG.115 CAMK1D 5.327579 8.925952 +695 chr10 + 12391732 12877545 MSTRG.115.4 11 7907 MSTRG.115 . 3.926099 6.577879 +696 chr10 + 12391758 12823236 MSTRG.115.7 6 1421 MSTRG.115 . 3.303180 5.534226 +697 chr10 + 12391758 12877545 MSTRG.115.6 12 7853 MSTRG.115 . 50.319416 84.306343 +698 chr10 + 12457927 12457999 ENST00000516629.1 1 73 MSTRG.116 SNORD45 0.000000 0.000000 +699 chr10 + 12498482 12498630 ENST00000516309.1 1 149 MSTRG.117 RNU6ATAC39P 0.000000 0.000000 +700 chr10 + 12580266 12869446 MSTRG.115.8 10 2774 MSTRG.115 . 8.990784 15.063371 +701 chr10 + 12620752 12620822 ENST00000582492.1 1 71 MSTRG.118 MIR4480 0.000000 0.000000 +702 chr10 - 12767253 12767352 ENST00000408404.1 1 100 MSTRG.119 MIR548Q 0.000000 0.000000 +703 chr10 - 12938627 13043697 ENST00000378825.3 3 2729 MSTRG.120 CCDC3 22.887505 38.346264 +704 chr10 - 12938627 13141811 ENST00000378839.1 7 3339 MSTRG.120 CCDC3 0.000000 0.000000 +705 chr10 - 12966679 12966785 ENST00000391197.1 1 107 MSTRG.121 RNA5SP300 0.000000 0.000000 +706 chr10 - 13099902 13100676 ENST00000441148.1 1 775 MSTRG.122 RPL5P25 2.877419 4.820896 +707 chr10 - 13103634 13141811 MSTRG.120.3 4 895 MSTRG.120 . 0.000000 0.000000 +708 chr10 - 13140536 13141811 MSTRG.120.4 3 511 MSTRG.120 . 2.250729 3.770925 +709 chr10 + 13141449 13180375 ENST00000263036.5 15 3916 MSTRG.123 OPTN 0.000000 0.000000 +710 chr10 + 13141603 13180375 ENST00000378764.2 15 3744 MSTRG.123 OPTN 0.000000 0.000000 +711 chr10 + 13142069 13180375 MSTRG.123.3 15 3622 MSTRG.123 . 14.728657 24.676741 +712 chr10 + 13142070 13180375 MSTRG.123.4 14 3469 MSTRG.123 . 16.761564 28.082720 +713 chr10 + 13142070 13180375 MSTRG.123.5 16 3693 MSTRG.123 . 14.596854 24.455914 +714 chr10 + 13142159 13151662 ENST00000487935.1 3 511 MSTRG.123 OPTN 0.000000 0.000000 +715 chr10 + 13142163 13161040 ENST00000482140.1 5 727 MSTRG.123 OPTN 0.000000 0.000000 +716 chr10 + 13142169 13180375 ENST00000378757.2 14 3388 MSTRG.123 OPTN 16.551105 27.730114 +717 chr10 + 13142173 13158340 ENST00000430081.1 5 861 MSTRG.123 OPTN 3.086923 5.171904 +718 chr10 + 13142173 13180375 ENST00000378748.3 16 3605 MSTRG.123 OPTN 15.537936 26.032625 +719 chr10 + 13142173 13180375 ENST00000378752.3 16 3572 MSTRG.123 OPTN 14.674339 24.585733 +720 chr10 + 13142225 13180375 ENST00000378747.3 15 3484 MSTRG.123 OPTN 4.823391 8.081223 +721 chr10 - 13146574 13146793 ENST00000456003.1 1 220 MSTRG.124 SNRPGP5 3.559091 5.962986 +722 chr10 + 13154487 13158540 ENST00000486862.1 2 423 MSTRG.123 OPTN 2.636788 4.417737 +723 chr10 + 13158268 13165198 ENST00000424614.1 4 664 MSTRG.123 OPTN 8.887710 14.890678 +724 chr10 + 13173319 13180375 ENST00000469025.1 4 2099 MSTRG.123 OPTN 0.000000 0.000000 +725 chr10 - 13181196 13181533 ENST00000442321.1 1 338 ENSG00000234175.1 RP11-730A19.9 0.000000 0.000000 +726 chr10 - 13184185 13184977 ENST00000442900.1 1 793 ENSG00000228330.1 RP11-730A19.5 0.000000 0.000000 +727 chr10 - 13198684 13200136 ENST00000447253.1 1 1453 ENSG00000203414.2 BTBD7P1 0.000000 0.000000 +728 chr10 + 13200491 13201463 MSTRG.125.1 1 973 MSTRG.125 . 0.000000 0.000000 +729 chr10 - 13201477 13201777 ENST00000418616.1 1 301 MSTRG.126 RP11-730A19.7 1.222591 2.048358 +730 chr10 + 13203554 13253104 ENST00000378714.3 20 4547 MSTRG.127 MCM10 36.075428 60.441628 +731 chr10 + 13203579 13214480 ENST00000479669.1 3 475 MSTRG.127 MCM10 0.000000 0.000000 +732 chr10 + 13203579 13253104 ENST00000484800.2 20 4525 MSTRG.127 MCM10 262.057739 439.057739 +733 chr10 + 13206128 13253104 ENST00000378694.1 18 4587 MSTRG.127 MCM10 80.675499 135.165634 +734 chr10 + 13234491 13237580 ENST00000459751.1 2 618 MSTRG.127 MCM10 2.874265 4.815611 +735 chr10 + 13237086 13243872 ENST00000481292.1 4 900 MSTRG.127 MCM10 3.702217 6.202782 +736 chr10 + 13240763 13246526 ENST00000485659.1 3 467 MSTRG.127 MCM10 3.114921 5.218812 +737 chr10 + 13259269 13259375 ENST00000606623.1 1 107 MSTRG.128 RNU6-6P 121.789719 204.049377 +738 chr10 - 13263767 13276331 ENST00000378681.3 5 826 ENSG00000165623.5 UCMA 0.000000 0.000000 +739 chr10 - 13263767 13276334 ENST00000463405.2 4 763 ENSG00000165623.5 UCMA 0.000000 0.000000 +740 chr10 - 13319796 13341763 ENST00000396913.2 8 1732 MSTRG.129 PHYH 0.000000 0.000000 +741 chr10 - 13319800 13342101 ENST00000263038.4 9 1577 MSTRG.129 PHYH 123.282700 206.550751 +742 chr10 - 13319843 13344412 ENST00000396920.3 9 1829 MSTRG.129 PHYH 2.191745 3.672101 +743 chr10 - 13325690 13341763 ENST00000453759.2 7 1097 MSTRG.129 PHYH 1.334261 2.235452 +744 chr10 - 13330412 13342101 ENST00000479604.1 6 691 MSTRG.129 PHYH 1.773692 2.971686 +745 chr10 - 13333461 13336987 ENST00000464049.1 2 1012 MSTRG.129 PHYH 3.471795 5.816728 +746 chr10 - 13337228 13342101 ENST00000463730.1 3 572 MSTRG.129 PHYH 0.000000 0.000000 +747 chr10 - 13350145 13350447 ENST00000429930.1 1 303 ENSG00000226209.1 AL138764.1 0.000000 0.000000 +748 chr10 - 13359424 13389358 MSTRG.130.1 9 3057 MSTRG.130 . 126.164421 211.378845 +749 chr10 - 13359424 13390297 ENST00000327347.5 9 3273 MSTRG.130 SEPHS1 433.019409 725.490967 +750 chr10 - 13360080 13390297 ENST00000378614.4 8 2404 MSTRG.130 SEPHS1 4.616798 7.735092 +751 chr10 - 13360083 13390297 ENST00000545675.1 10 2706 MSTRG.130 SEPHS1 3.438792 5.761433 +752 chr10 - 13360590 13390297 ENST00000537130.1 8 1836 MSTRG.130 SEPHS1 13.050613 21.865307 +753 chr10 - 13375877 13389358 ENST00000413411.1 5 660 MSTRG.130 SEPHS1 2.570112 4.306026 +754 chr10 - 13375901 13382790 ENST00000425947.1 4 383 MSTRG.130 SEPHS1 9.489503 15.898938 +755 chr10 - 13380716 13387460 ENST00000494329.1 2 796 MSTRG.130 SEPHS1 19.567339 32.783585 +756 chr10 + 13390362 13390978 MSTRG.131.1 1 617 MSTRG.131 . 2.824960 4.733005 +757 chr10 + 13457202 13465133 ENST00000448272.1 2 454 ENSG00000233256.1 RP11-445K13.2 0.000000 0.000000 +758 chr10 - 13480484 13502083 ENST00000486542.1 4 1764 MSTRG.132 BEND7 0.000000 0.000000 +759 chr10 - 13480501 13570974 ENST00000396900.2 9 2672 MSTRG.132 BEND7 0.000000 0.000000 +760 chr10 - 13480637 13544976 ENST00000341083.3 9 2239 MSTRG.132 BEND7 0.000000 0.000000 +761 chr10 - 13483084 13570974 MSTRG.132.4 9 4034 MSTRG.132 . 5.145432 8.620778 +762 chr10 - 13483084 13570974 MSTRG.132.5 9 7172 MSTRG.132 . 1.826545 3.060237 +763 chr10 - 13483084 13570974 MSTRG.132.6 8 7895 MSTRG.132 . 2.082700 3.489405 +764 chr10 - 13483084 13570974 MSTRG.132.7 9 4335 MSTRG.132 . 2.619244 4.388343 +765 chr10 - 13483087 13570974 MSTRG.132.10 6 7401 MSTRG.132 . 0.000000 0.000000 +766 chr10 - 13483087 13570974 MSTRG.132.11 9 7133 MSTRG.132 . 1.896485 3.177416 +767 chr10 - 13483087 13570974 MSTRG.132.12 10 4091 MSTRG.132 . 1.303202 2.183415 +768 chr10 - 13483087 13570974 MSTRG.132.13 10 4049 MSTRG.132 . 0.000000 0.000000 +769 chr10 - 13483087 13570974 MSTRG.132.8 9 4034 MSTRG.132 . 8.063491 13.509764 +770 chr10 - 13483087 13570974 MSTRG.132.9 8 7853 MSTRG.132 . 2.990194 5.009842 +771 chr10 - 13483088 13523120 ENST00000440282.1 3 6571 MSTRG.132 BEND7 3.791246 6.351943 +772 chr10 - 13483088 13570974 MSTRG.132.14 9 4334 MSTRG.132 . 1.741563 2.917856 +773 chr10 - 13483090 13570974 ENST00000396898.2 9 2375 MSTRG.132 BEND7 2.351175 3.939214 +774 chr10 - 13483113 13570974 MSTRG.132.17 9 2156 MSTRG.132 . 0.000000 0.000000 +775 chr10 - 13483113 13570974 MSTRG.132.18 9 7146 MSTRG.132 . 1.691091 2.833294 +776 chr10 - 13483113 13570974 MSTRG.132.19 7 5631 MSTRG.132 . 0.000000 0.000000 +777 chr10 - 13483114 13570974 MSTRG.132.20 9 2116 MSTRG.132 . 0.000000 0.000000 +778 chr10 - 13483355 13544976 ENST00000378605.3 8 1640 MSTRG.132 BEND7 0.000000 0.000000 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MSTRG.134 RP11-214D15.2 0.000000 0.000000 +791 chr10 + 13628927 13673142 ENST00000378572.3 10 1991 MSTRG.135 PRPF18 21.657034 36.284706 +792 chr10 + 13628927 13697929 MSTRG.135.1 15 12325 MSTRG.135 . 44.659504 74.823586 +793 chr10 + 13628939 13656086 ENST00000417658.1 10 1088 MSTRG.135 PRPF18 1.608628 2.695133 +794 chr10 + 13628968 13653683 ENST00000320054.4 7 819 MSTRG.135 PRPF18 20.333626 34.067436 +795 chr10 + 13628968 13697929 MSTRG.135.4 15 10144 MSTRG.135 . 0.000000 0.000000 +796 chr10 - 13633460 13634323 ENST00000445338.1 1 864 MSTRG.136 RP11-295P9.2 2.584571 4.330251 +797 chr10 + 13652047 13697929 ENST00000601460.1 7 1204 MSTRG.135 RP11-295P9.3 2.332952 3.908683 +798 chr10 + 13658531 13687074 ENST00000595538.1 5 734 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +799 chr10 + 13672284 13687074 ENST00000596044.1 5 824 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +800 chr10 + 13673143 13687074 ENST00000601075.1 4 923 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +801 chr10 + 13673288 13697929 ENST00000597920.1 4 1893 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +802 chr10 + 13673333 13690230 ENST00000440878.1 3 397 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +803 chr10 + 13673722 13696427 ENST00000601758.1 5 744 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +804 chr10 + 13673768 13697929 ENST00000599639.1 4 1099 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +805 chr10 + 13674680 13697929 ENST00000596499.1 6 1159 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +806 chr10 + 13678997 13687074 ENST00000599378.1 4 603 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +807 chr10 + 13680646 13686563 ENST00000610032.1 1 5918 MSTRG.135 RP11-295P9.3 4.316423 7.231837 +808 chr10 + 13680825 13688669 ENST00000437446.1 2 1852 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +809 chr10 + 13685644 13695446 ENST00000600249.1 6 773 MSTRG.135 RP11-295P9.3 1.628856 2.729024 +810 chr10 - 13685706 13900912 ENST00000358621.4 23 6407 MSTRG.137 FRMD4A 4.998617 8.374802 +811 chr10 - 13685706 13933775 MSTRG.137.2 24 6559 MSTRG.137 . 59.952656 100.446098 +812 chr10 - 13685706 14050897 MSTRG.137.1 23 7174 MSTRG.137 . 2.724018 4.563884 +813 chr10 - 13685712 14372883 ENST00000357447.2 25 6815 MSTRG.137 FRMD4A 0.000000 0.000000 +814 chr10 + 13686576 13690773 ENST00000600501.1 3 793 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +815 chr10 + 13686791 13697929 ENST00000596235.1 6 1237 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +816 chr10 - 13688056 14050897 MSTRG.137.5 24 4860 MSTRG.137 . 1.045823 1.752197 +817 chr10 - 13688272 13696526 ENST00000475325.1 2 875 MSTRG.137 FRMD4A 0.000000 0.000000 +818 chr10 - 13688334 13699173 ENST00000495956.1 3 1337 MSTRG.137 FRMD4A 2.232854 3.740976 +819 chr10 + 13688670 13697929 ENST00000419851.2 4 1380 MSTRG.135 RP11-295P9.3 1.052945 1.764129 +820 chr10 + 13688844 13697929 ENST00000594575.1 5 1355 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +821 chr10 + 13690184 13710595 ENST00000593351.1 3 1120 MSTRG.135 RP11-295P9.3 2.930294 4.909484 +822 chr10 + 13691264 13697929 ENST00000600511.1 4 949 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +823 chr10 + 13691284 13697929 ENST00000593358.1 4 760 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +824 chr10 - 13693905 14372182 ENST00000378503.1 23 3201 MSTRG.137 FRMD4A 0.000000 0.000000 +825 chr10 + 13694052 13697929 ENST00000598625.1 3 1065 MSTRG.135 RP11-295P9.3 2.727403 4.569555 +826 chr10 + 13695825 13697929 ENST00000430721.1 2 1155 MSTRG.135 RP11-295P9.3 3.234468 5.419104 +827 chr10 - 13699174 13750043 MSTRG.137.11 12 2390 MSTRG.137 . 6.871621 11.512877 +828 chr10 - 13699174 13750043 MSTRG.137.13 12 2460 MSTRG.137 . 4.789562 8.024546 +829 chr10 - 13699174 13750043 MSTRG.137.14 10 2565 MSTRG.137 . 4.986739 8.354900 +830 chr10 - 13699174 13750043 MSTRG.137.15 9 2478 MSTRG.137 . 5.652476 9.470292 +831 chr10 - 13699174 13750043 MSTRG.137.17 11 3109 MSTRG.137 . 8.126774 13.615788 +832 chr10 - 13699174 13750043 MSTRG.137.9 11 2424 MSTRG.137 . 6.886035 11.537025 +833 chr10 - 13699174 13933775 MSTRG.137.10 22 2558 MSTRG.137 . 8.923520 14.950676 +834 chr10 - 13699174 14014369 MSTRG.137.16 21 3033 MSTRG.137 . 0.000000 0.000000 +835 chr10 - 13699174 14050897 MSTRG.137.12 23 3789 MSTRG.137 . 0.000000 0.000000 +836 chr10 - 13708224 14014369 ENST00000264546.6 17 2145 MSTRG.137 FRMD4A 0.000000 0.000000 +837 chr10 + 13717646 13717990 ENST00000609756.1 1 345 MSTRG.138 RP11-295P9.12 0.000000 0.000000 +838 chr10 + 13724521 13726874 ENST00000600850.1 2 1978 MSTRG.139 RP11-295P9.8 0.000000 0.000000 +839 chr10 - 13734169 13750043 ENST00000492155.1 3 3017 MSTRG.137 FRMD4A 3.448909 5.778384 +840 chr10 - 13735703 14050897 ENST00000342409.2 14 2106 MSTRG.137 FRMD4A 0.000000 0.000000 +841 chr10 - 13735983 13750043 ENST00000477221.1 4 971 MSTRG.137 FRMD4A 0.000000 0.000000 +842 chr10 + 13746978 13747072 ENST00000410303.1 1 95 MSTRG.140 AL157392.1 0.000000 0.000000 +843 chr10 + 13752415 13754054 ENST00000412388.1 2 373 MSTRG.141 RP11-295P9.6 0.000000 0.000000 +844 chr10 + 13769796 13769916 ENST00000362537.1 1 121 MSTRG.142 RNA5SP301 0.000000 0.000000 +845 chr10 + 13771383 13798200 ENST00000449462.1 3 474 MSTRG.143 RP11-353M9.1 0.000000 0.000000 +846 chr10 + 13912797 13913175 ENST00000475013.1 1 379 MSTRG.144 RP11-308K19.2 0.000000 0.000000 +847 chr10 + 14033815 14049525 ENST00000446193.1 3 570 MSTRG.145 RP11-142M10.2 0.000000 0.000000 +848 chr10 + 14053432 14063601 MSTRG.146.1 2 1693 MSTRG.146 . 0.000000 0.000000 +849 chr10 + 14116283 14129734 ENST00000451617.1 3 920 MSTRG.147 RP11-397C18.2 0.000000 0.000000 +850 chr10 + 14116283 14131638 MSTRG.147.1 5 1432 MSTRG.147 . 0.000000 0.000000 +851 chr10 + 14116702 14120540 MSTRG.147.4 2 235 MSTRG.147 . 0.000000 0.000000 +852 chr10 + 14116702 14128905 MSTRG.147.3 3 441 MSTRG.147 . 0.000000 0.000000 +853 chr10 - 14124946 14504141 ENST00000493380.1 4 1197 MSTRG.137 FRMD4A 0.000000 0.000000 +854 chr10 - 14368174 14504141 ENST00000475141.2 4 1233 MSTRG.137 FRMD4A 0.000000 0.000000 +855 chr10 + 14417237 14432137 MSTRG.148.1 3 3915 MSTRG.148 . 0.000000 0.000000 +856 chr10 + 14417459 14432137 MSTRG.148.2 4 3009 MSTRG.148 . 0.000000 0.000000 +857 chr10 + 14418734 14432137 MSTRG.148.3 3 1684 MSTRG.148 . 0.000000 0.000000 +858 chr10 + 14418887 14432137 MSTRG.148.4 4 2315 MSTRG.148 . 0.000000 0.000000 +859 chr10 + 14418887 14456385 MSTRG.148.5 3 2567 MSTRG.148 . 0.000000 0.000000 +860 chr10 - 14425199 14425276 ENST00000584305.1 1 78 MSTRG.149 MIR4293 0.000000 0.000000 +861 chr10 + 14460801 14481374 MSTRG.150.1 3 861 MSTRG.150 . 0.000000 0.000000 +862 chr10 + 14478575 14478660 ENST00000408444.1 1 86 MSTRG.151 MIR1265 0.000000 0.000000 +863 chr10 - 14560556 14590669 ENST00000378470.1 4 3316 MSTRG.152 FAM107B 179.198853 300.234009 +864 chr10 - 14560556 14598413 MSTRG.152.2 5 3204 MSTRG.152 . 27.528505 46.121910 +865 chr10 - 14560556 14646417 MSTRG.152.1 6 3404 MSTRG.152 . 28.938818 48.484779 +866 chr10 - 14560556 14646417 MSTRG.152.3 6 3387 MSTRG.152 . 15.318361 25.664743 +867 chr10 - 14560556 14646417 MSTRG.152.4 5 3338 MSTRG.152 . 24.801149 41.552429 +868 chr10 - 14560556 14646417 MSTRG.152.5 6 5580 MSTRG.152 . 45.160244 75.662537 +869 chr10 - 14560559 14816896 ENST00000181796.2 5 3785 MSTRG.152 FAM107B 0.000000 0.000000 +870 chr10 - 14561158 14646417 ENST00000468747.1 4 2662 MSTRG.152 FAM107B 8.307467 13.918527 +871 chr10 - 14561512 14646417 ENST00000378467.4 5 2374 MSTRG.152 FAM107B 0.000000 0.000000 +872 chr10 - 14561901 14816896 ENST00000487335.1 6 2509 MSTRG.152 FAM107B 0.000000 0.000000 +873 chr10 - 14562794 14614188 ENST00000378465.3 4 1113 MSTRG.152 FAM107B 0.000000 0.000000 +874 chr10 - 14562850 14614188 ENST00000378458.2 5 1284 MSTRG.152 FAM107B 0.000000 0.000000 +875 chr10 - 14563016 14598360 ENST00000478076.1 4 971 MSTRG.152 FAM107B 0.000000 0.000000 +876 chr10 - 14563072 14614188 ENST00000378462.1 4 768 MSTRG.152 FAM107B 0.000000 0.000000 +877 chr10 - 14563088 14590669 ENST00000481209.1 5 887 MSTRG.152 FAM107B 0.000000 0.000000 +878 chr10 - 14563095 14564224 ENST00000475858.1 2 568 MSTRG.152 FAM107B 0.000000 0.000000 +879 chr10 - 14563136 14596228 ENST00000496330.1 5 697 MSTRG.152 FAM107B 0.000000 0.000000 +880 chr10 - 14563136 14598413 ENST00000492700.1 4 558 MSTRG.152 FAM107B 0.000000 0.000000 +881 chr10 - 14563157 14614338 ENST00000479731.1 4 595 MSTRG.152 FAM107B 0.000000 0.000000 +882 chr10 - 14563193 14614338 ENST00000468492.1 5 625 MSTRG.152 FAM107B 0.000000 0.000000 +883 chr10 - 14563200 14614188 ENST00000452706.2 4 868 MSTRG.152 FAM107B 0.000000 0.000000 +884 chr10 - 14563206 14574709 ENST00000489100.1 4 559 MSTRG.152 FAM107B 0.000000 0.000000 +885 chr10 - 14563211 14598014 ENST00000494865.1 5 691 MSTRG.152 FAM107B 0.000000 0.000000 +886 chr10 - 14563280 14598360 ENST00000475786.1 5 773 MSTRG.152 FAM107B 0.000000 0.000000 +887 chr10 - 14563868 14614188 ENST00000488576.1 5 711 MSTRG.152 FAM107B 0.000000 0.000000 +888 chr10 - 14563869 14595482 ENST00000474143.1 3 496 MSTRG.152 FAM107B 2.575373 4.314841 +889 chr10 - 14563875 14654551 ENST00000442012.1 4 458 MSTRG.152 FAM107B 0.000000 0.000000 +890 chr10 - 14563893 14614188 ENST00000482277.1 4 642 MSTRG.152 FAM107B 0.000000 0.000000 +891 chr10 - 14563944 14614188 ENST00000472095.1 5 632 MSTRG.152 FAM107B 0.000000 0.000000 +892 chr10 - 14571527 14646417 ENST00000471815.1 3 1022 MSTRG.152 FAM107B 0.000000 0.000000 +893 chr10 - 14571954 14614188 ENST00000464952.1 4 748 MSTRG.152 FAM107B 0.000000 0.000000 +894 chr10 - 14576785 14614188 ENST00000495292.1 3 576 MSTRG.152 FAM107B 0.000000 0.000000 +895 chr10 - 14644456 14646417 ENST00000491458.1 2 573 MSTRG.152 FAM107B 1.982922 3.322234 +896 chr10 + 14694741 14703690 ENST00000443282.1 3 357 MSTRG.153 RP11-7C6.1 0.000000 0.000000 +897 chr10 - 14705394 14705493 ENST00000364896.1 1 100 MSTRG.154 RNA5SP302 0.000000 0.000000 +898 chr10 - 14765170 14766054 ENST00000456871.1 1 885 MSTRG.155 RP11-398C13.2 1.170056 1.960339 +899 chr10 - 14860113 14880071 MSTRG.156.1 5 2600 MSTRG.156 . 6.737254 11.287754 +900 chr10 - 14860273 14880071 MSTRG.156.2 6 2561 MSTRG.156 . 0.000000 0.000000 +901 chr10 - 14860304 14880071 MSTRG.156.3 6 2526 MSTRG.156 . 0.000000 0.000000 +902 chr10 - 14861249 14880574 ENST00000378442.1 6 1492 MSTRG.156 CDNF 0.000000 0.000000 +903 chr10 - 14861530 14880071 ENST00000378441.2 4 1041 MSTRG.156 CDNF 0.000000 0.000000 +904 chr10 - 14861884 14870271 ENST00000467405.1 3 529 MSTRG.156 CDNF 0.000000 0.000000 +905 chr10 - 14861887 14878293 ENST00000466269.1 4 585 MSTRG.156 CDNF 0.000000 0.000000 +906 chr10 - 14861979 14880071 ENST00000465530.1 4 690 MSTRG.156 CDNF 0.000000 0.000000 +907 chr10 + 14880163 14913740 ENST00000378372.3 14 1904 MSTRG.157 HSPA14 377.983307 633.282166 +908 chr10 + 14880228 14884845 ENST00000493863.1 4 1108 MSTRG.157 HSPA14 7.356232 12.324805 +909 chr10 + 14880228 14888988 MSTRG.157.2 5 4727 MSTRG.157 . 54.130161 90.690948 +910 chr10 + 14880301 14888988 ENST00000437161.2 4 3941 MSTRG.157 HSPA14 43.303104 72.551048 +911 chr10 + 14880330 14884845 ENST00000493178.1 5 1105 MSTRG.157 HSPA14 2.427283 4.066727 +912 chr10 + 14880436 14891719 ENST00000441647.1 6 630 MSTRG.157 HSPA14 18.725546 31.373222 +913 chr10 + 14892714 14896279 ENST00000470430.1 3 927 MSTRG.157 HSPA14 15.818669 26.502972 +914 chr10 - 14919687 14920685 ENST00000609399.1 1 999 MSTRG.158 RP11-398C13.6 9.009519 15.094760 +915 chr10 + 14920819 14954823 ENST00000378331.5 5 11468 MSTRG.159 SUV39H2 23.610895 39.558250 +916 chr10 + 14920819 14955409 MSTRG.159.1 6 11880 MSTRG.159 . 9.009794 15.095222 +917 chr10 + 14920847 14954823 ENST00000433779.1 6 11087 MSTRG.159 SUV39H2 1.668390 2.795260 +918 chr10 + 14920862 14954823 ENST00000378325.3 6 11031 MSTRG.159 SUV39H2 7.093853 11.885209 +919 chr10 + 14920888 14954823 ENST00000354919.6 6 11545 MSTRG.159 SUV39H2 23.980440 40.177395 +920 chr10 + 14920888 14954823 MSTRG.159.6 6 11586 MSTRG.159 . 2.490374 4.172431 +921 chr10 + 14920888 14955409 MSTRG.159.5 7 11957 MSTRG.159 . 9.011368 15.097858 +922 chr10 + 14920899 14954823 ENST00000313519.5 5 11596 MSTRG.159 SUV39H2 4.337450 7.267066 +923 chr10 + 14920921 14939516 ENST00000420416.1 2 711 MSTRG.159 SUV39H2 3.405725 5.706032 +924 chr10 + 14921123 14954823 MSTRG.159.10 6 11891 MSTRG.159 . 0.000000 0.000000 +925 chr10 + 14921815 14939516 ENST00000412254.1 3 1070 MSTRG.159 SUV39H2 0.000000 0.000000 +926 chr10 + 14923499 14954823 ENST00000358298.6 4 10842 MSTRG.159 SUV39H2 0.000000 0.000000 +927 chr10 - 14939358 14996431 ENST00000378289.4 14 3532 MSTRG.160 DCLRE1C 9.259458 15.513514 +928 chr10 - 14948897 14996431 ENST00000453695.2 14 4011 MSTRG.160 DCLRE1C 18.196463 30.486786 +929 chr10 - 14949878 14996431 ENST00000378246.2 13 2974 MSTRG.160 DCLRE1C 1.014954 1.700478 +930 chr10 - 14950165 14996431 ENST00000357717.2 12 2602 MSTRG.160 DCLRE1C 0.000000 0.000000 +931 chr10 - 14950170 14996431 ENST00000378249.1 12 2630 MSTRG.160 DCLRE1C 0.000000 0.000000 +932 chr10 - 14950170 14996431 ENST00000378254.1 15 2869 MSTRG.160 DCLRE1C 0.000000 0.000000 +933 chr10 - 14950170 14996431 ENST00000378255.1 16 3191 MSTRG.160 DCLRE1C 1.174154 1.967205 +934 chr10 - 14950170 14996431 ENST00000378258.1 15 2823 MSTRG.160 DCLRE1C 1.333000 2.233340 +935 chr10 - 14950170 14996431 ENST00000378278.2 14 2738 MSTRG.160 DCLRE1C 0.000000 0.000000 +936 chr10 - 14950170 14996431 ENST00000396817.2 16 3145 MSTRG.160 DCLRE1C 0.000000 0.000000 +937 chr10 - 14950187 14965674 ENST00000378242.1 3 1933 MSTRG.160 DCLRE1C 0.000000 0.000000 +938 chr10 - 14950187 14996431 MSTRG.160.11 16 2937 MSTRG.160 . 1.560608 2.614680 +939 chr10 - 14950741 14970141 ENST00000492201.1 6 1020 MSTRG.160 DCLRE1C 0.000000 0.000000 +940 chr10 - 14950741 14996431 MSTRG.160.13 15 2307 MSTRG.160 . 0.000000 0.000000 +941 chr10 - 14951169 14953321 ENST00000489845.1 2 294 MSTRG.160 DCLRE1C 0.000000 0.000000 +942 chr10 - 14951169 15059043 MSTRG.160.15 7 780 MSTRG.160 . 1.841078 3.084586 +943 chr10 - 14961795 14970141 ENST00000489161.1 3 253 MSTRG.160 DCLRE1C 0.000000 0.000000 +944 chr10 - 14961795 14996431 MSTRG.160.17 13 1549 MSTRG.160 . 1.283895 2.151068 +945 chr10 - 14970142 14996431 ENST00000418843.1 11 1302 MSTRG.160 DCLRE1C 0.000000 0.000000 +946 chr10 - 14976444 14996431 ENST00000378241.1 10 1247 MSTRG.160 DCLRE1C 0.000000 0.000000 +947 chr10 - 14976722 14996431 ENST00000456122.1 8 1290 MSTRG.160 DCLRE1C 0.000000 0.000000 +948 chr10 + 15001398 15030049 MSTRG.161.1 6 1215 MSTRG.161 . 1.972160 3.304204 +949 chr10 + 15001438 15014850 ENST00000407572.1 3 625 MSTRG.161 MEIG1 0.000000 0.000000 +950 chr10 + 15001438 15014850 ENST00000477770.1 2 458 MSTRG.161 MEIG1 0.000000 0.000000 +951 chr10 + 15001509 15014850 ENST00000496225.2 3 686 MSTRG.161 MEIG1 0.000000 0.000000 +952 chr10 + 15008438 15014850 ENST00000378240.1 2 507 MSTRG.161 MEIG1 0.000000 0.000000 +953 chr10 + 15014554 15030049 ENST00000467536.1 3 548 MSTRG.161 MEIG1 0.000000 0.000000 +954 chr10 - 15028941 15029514 ENST00000431186.2 1 574 MSTRG.162 OR7E110P 0.000000 0.000000 +955 chr10 - 15041049 15042054 ENST00000502808.2 1 1006 MSTRG.163 OR7E26P 0.000000 0.000000 +956 chr10 - 15049860 15050883 ENST00000382617.4 1 1024 MSTRG.164 OR7E115P 0.000000 0.000000 +957 chr10 - 15057071 15130775 ENST00000378211.3 8 997 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +958 chr10 - 15057369 15063862 ENST00000454630.1 5 470 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +959 chr10 + 15074226 15107752 ENST00000428897.1 6 859 MSTRG.165 OLAH 0.000000 0.000000 +960 chr10 + 15074252 15098981 ENST00000413672.1 4 583 MSTRG.165 OLAH 0.000000 0.000000 +961 chr10 + 15080621 15107752 ENST00000429028.1 6 797 MSTRG.165 OLAH 0.000000 0.000000 +962 chr10 + 15085895 15115851 ENST00000378228.3 8 1675 MSTRG.165 OLAH 0.000000 0.000000 +963 chr10 + 15085926 15104083 ENST00000378225.1 4 810 MSTRG.165 OLAH 0.000000 0.000000 +964 chr10 + 15085962 15115851 ENST00000378217.3 9 1767 MSTRG.165 OLAH 0.000000 0.000000 +965 chr10 + 15091722 15110069 ENST00000493912.1 5 491 MSTRG.165 OLAH 0.000000 0.000000 +966 chr10 + 15107537 15115851 ENST00000485251.1 2 982 MSTRG.165 OLAH 0.000000 0.000000 +967 chr10 - 15119522 15130775 ENST00000356189.5 4 1322 MSTRG.160 ACBD7 23.536163 39.433044 +968 chr10 - 15120486 15130715 ENST00000496890.1 4 709 MSTRG.160 ACBD7 0.000000 0.000000 +969 chr10 - 15135262 15135610 ENST00000452090.1 1 349 ENSG00000228312.1 GAPDHP45 0.000000 0.000000 +970 chr10 - 15137384 15139318 ENST00000378207.3 2 1714 MSTRG.166 C10orf111 1.102220 1.846686 +971 chr10 + 15139179 15146256 ENST00000378203.1 3 1302 MSTRG.167 RPP38 41.321674 69.231308 +972 chr10 + 15139214 15148129 ENST00000378201.2 5 833 MSTRG.167 RPP38 0.000000 0.000000 +973 chr10 + 15139236 15181817 ENST00000451677.1 3 323 MSTRG.167 RPP38 0.000000 0.000000 +974 chr10 + 15139330 15146256 ENST00000378202.5 2 1032 MSTRG.167 RPP38 61.633980 103.263023 +975 chr10 + 15139381 15146256 ENST00000378197.4 3 1457 MSTRG.167 RPP38 50.387318 84.420105 +976 chr10 + 15139419 15146256 ENST00000441850.1 2 1300 MSTRG.167 RPP38 32.185150 53.923759 +977 chr10 - 15144583 15151838 ENST00000466201.1 2 1238 MSTRG.168 NMT2 5.951908 9.971968 +978 chr10 - 15147758 15210692 MSTRG.168.2 12 2497 MSTRG.168 . 14.095389 23.615749 +979 chr10 - 15147758 15210692 MSTRG.168.3 13 2540 MSTRG.168 . 14.507239 24.305771 +980 chr10 - 15148372 15161512 ENST00000486786.1 4 803 MSTRG.168 NMT2 4.630456 7.757975 +981 chr10 - 15149865 15210692 ENST00000378165.4 12 2907 MSTRG.168 NMT2 50.997635 85.442642 +982 chr10 - 15150293 15210692 ENST00000378150.1 13 2522 MSTRG.168 NMT2 49.929264 83.652672 +983 chr10 - 15151020 15202124 ENST00000540259.1 12 1832 MSTRG.168 NMT2 1.078325 1.806651 +984 chr10 - 15151098 15210501 ENST00000535341.1 13 1669 MSTRG.168 NMT2 0.000000 0.000000 +985 chr10 - 15174816 15183352 ENST00000478580.1 5 840 MSTRG.168 NMT2 0.000000 0.000000 +986 chr10 - 15196801 15197319 ENST00000415473.1 1 519 MSTRG.169 PPIAP30 0.000000 0.000000 +987 chr10 - 15213035 15213277 ENST00000450788.1 1 243 ENSG00000228181.1 RP11-455B2.9 0.000000 0.000000 +988 chr10 - 15253642 15413061 ENST00000378116.4 8 3955 MSTRG.170 FAM171A1 268.566559 449.962769 +989 chr10 - 15256170 15290814 ENST00000477161.1 3 725 MSTRG.170 FAM171A1 1.330393 2.228972 +990 chr10 + 15279491 15283766 ENST00000433455.1 2 794 MSTRG.171 RP11-25G10.2 0.000000 0.000000 +991 chr10 - 15290638 15413061 ENST00000455654.1 4 605 MSTRG.170 FAM171A1 0.000000 0.000000 +992 chr10 - 15555948 15762124 ENST00000378076.3 30 6755 MSTRG.172 ITGA8 0.000000 0.000000 +993 chr10 - 15638512 15646286 ENST00000477064.1 2 867 MSTRG.172 ITGA8 0.000000 0.000000 +994 chr10 - 15653509 15686220 ENST00000468882.1 4 425 MSTRG.172 ITGA8 0.000000 0.000000 +995 chr10 - 15820169 15860007 ENST00000378036.1 6 2452 MSTRG.173 FAM188A 0.000000 0.000000 +996 chr10 - 15820169 15902519 ENST00000277632.3 15 2381 MSTRG.173 FAM188A 92.075081 154.264771 +997 chr10 - 15820169 15902519 ENST00000477891.1 14 2329 MSTRG.173 FAM188A 46.633057 78.130127 +998 chr10 - 15820853 15824334 ENST00000476912.1 2 469 MSTRG.173 FAM188A 3.255156 5.453765 +999 chr10 - 15820853 15902519 MSTRG.173.4 13 1528 MSTRG.173 . 6.497160 10.885496 +1000 chr10 - 15830827 15879317 ENST00000418767.1 7 986 MSTRG.173 FAM188A 5.017645 8.406681 diff -r 298d81e5e138 -r d3377a16d881 test-data/ASP14_2.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ASP14_2.tabular Wed Jan 14 09:30:42 2026 +0000 @@ -0,0 +1,1001 @@ +t_id chr strand start end t_name num_exons length gene_id gene_name cov FPKM +1 chr10 + 90652 92824 ENST00000416477.1 6 747 ENSG00000237297.1 RP11-631M21.6 0.000000 0.000000 +2 chr10 - 92828 96173 ENST00000447903.2 4 2273 MSTRG.1 TUBB8 2.529495 3.929044 +3 chr10 - 92832 95347 ENST00000309812.4 4 1669 MSTRG.1 TUBB8 0.000000 0.000000 +4 chr10 - 92860 96173 MSTRG.1.3 4 2409 MSTRG.1 . 2.053739 3.190056 +5 chr10 - 93434 95347 ENST00000332708.5 3 958 MSTRG.1 TUBB8 0.000000 0.000000 +6 chr10 - 93518 120103 ENST00000413237.3 5 1968 MSTRG.1 TUBB8 0.000000 0.000000 +7 chr10 - 93645 95347 ENST00000482075.1 3 934 MSTRG.1 TUBB8 0.000000 0.000000 +8 chr10 - 126334 132205 ENST00000423948.1 7 1312 ENSG00000232420.2 IL9RP2 0.000000 0.000000 +9 chr10 + 180359 300577 MSTRG.2.1 15 4363 MSTRG.2 . 37.617191 58.430470 +10 chr10 + 180405 283617 ENST00000439456.1 5 788 MSTRG.2 ZMYND11 0.000000 0.000000 +11 chr10 + 180424 295201 ENST00000381602.4 14 2287 MSTRG.2 ZMYND11 1.052007 1.634074 +12 chr10 + 180424 300577 ENST00000309776.4 15 4404 MSTRG.2 ZMYND11 18.424902 28.619246 +13 chr10 + 180643 295201 ENST00000509513.2 14 2065 MSTRG.2 ZMYND11 1.586722 2.464642 +14 chr10 + 180643 300577 MSTRG.2.5 14 4433 MSTRG.2 . 5.023680 7.803240 +15 chr10 + 180742 300577 ENST00000397959.3 13 3831 MSTRG.2 ZMYND11 4.383235 6.808442 +16 chr10 + 180742 300577 MSTRG.2.7 14 3924 MSTRG.2 . 29.364735 45.611996 +17 chr10 + 181009 300577 ENST00000381591.1 15 4229 MSTRG.2 ZMYND11 55.761150 86.613327 +18 chr10 + 181424 300577 ENST00000381607.4 14 3909 MSTRG.2 ZMYND11 14.125954 21.941727 +19 chr10 + 181424 300577 ENST00000403354.1 13 3831 MSTRG.2 ZMYND11 10.983361 17.060364 +20 chr10 + 181449 300577 ENST00000402736.1 14 3953 MSTRG.2 ZMYND11 17.565712 27.284674 +21 chr10 + 181449 300577 MSTRG.2.12 15 4046 MSTRG.2 . 111.885460 173.790741 +22 chr10 - 200771 200883 ENST00000391029.1 1 113 MSTRG.3 RNA5SP297 0.000000 0.000000 +23 chr10 + 225930 300577 ENST00000602682.1 12 3744 MSTRG.2 ZMYND11 0.000000 0.000000 +24 chr10 + 225933 300577 ENST00000381604.4 15 4091 MSTRG.2 ZMYND11 0.000000 0.000000 +25 chr10 + 225934 283617 ENST00000397955.2 6 673 MSTRG.2 ZMYND11 0.000000 0.000000 +26 chr10 + 225934 300577 ENST00000381584.1 15 4090 MSTRG.2 ZMYND11 150.267365 233.409042 +27 chr10 + 225953 295201 ENST00000558098.2 13 1859 MSTRG.2 ZMYND11 5.685655 8.831480 +28 chr10 + 255833 300577 ENST00000545619.1 11 3616 MSTRG.2 ZMYND11 6.836141 10.618521 +29 chr10 + 255891 300577 ENST00000535374.1 10 3492 MSTRG.2 ZMYND11 10.573341 16.423483 +30 chr10 + 285902 292939 ENST00000488275.1 4 581 MSTRG.2 ZMYND11 4.462445 6.931478 +31 chr10 + 290411 294548 ENST00000473115.1 4 680 MSTRG.2 ZMYND11 1.474081 2.289678 +32 chr10 - 309144 309545 MSTRG.4.1 2 247 MSTRG.4 . 1.959514 3.043697 +33 chr10 - 320130 735683 ENST00000280886.6 37 7971 MSTRG.5 DIP2C 69.902000 108.578194 +34 chr10 - 320192 735683 MSTRG.5.2 38 8077 MSTRG.5 . 29.250011 45.433796 +35 chr10 - 320204 566221 MSTRG.5.5 39 7926 MSTRG.5 . 0.000000 0.000000 +36 chr10 - 320204 644381 MSTRG.5.3 39 7922 MSTRG.5 . 0.000000 0.000000 +37 chr10 - 320204 644381 MSTRG.5.4 37 7724 MSTRG.5 . 0.000000 0.000000 +38 chr10 + 323124 323248 ENST00000579524.1 1 125 MSTRG.6 AL603831.1 0.000000 0.000000 +39 chr10 - 327955 328065 ENST00000364991.1 1 111 MSTRG.7 RNA5SP298 2.594594 4.030161 +40 chr10 - 370579 375541 ENST00000434695.2 3 721 MSTRG.5 DIP2C 0.000000 0.000000 +41 chr10 - 401488 629900 ENST00000381496.3 26 4205 MSTRG.5 DIP2C 0.000000 0.000000 +42 chr10 - 402180 419130 ENST00000540204.1 8 1358 MSTRG.5 DIP2C 0.000000 0.000000 +43 chr10 - 410902 433749 ENST00000421992.1 7 731 MSTRG.5 DIP2C 0.000000 0.000000 +44 chr10 - 476181 476444 ENST00000470784.2 1 264 MSTRG.8 RN7SL754P 0.000000 0.000000 +45 chr10 + 483501 487110 ENST00000425723.2 2 558 MSTRG.9 RP11-490E15.2 0.000000 0.000000 +46 chr10 - 486811 735683 ENST00000423550.1 5 727 MSTRG.5 DIP2C 0.000000 0.000000 +47 chr10 + 674578 677195 ENST00000451601.1 2 1657 MSTRG.10 RP11-809C18.3 0.000000 0.000000 +48 chr10 - 687629 687718 ENST00000578903.1 1 90 MSTRG.11 MIR5699 0.000000 0.000000 +49 chr10 + 695888 698593 ENST00000441152.2 3 2249 MSTRG.12 PRR26 0.000000 0.000000 +50 chr10 + 696017 711109 ENST00000381489.5 3 2838 MSTRG.12 PRR26 0.000000 0.000000 +51 chr10 + 709498 712562 ENST00000443662.1 2 550 MSTRG.12 RP11-809C18.5 0.000000 0.000000 +52 chr10 + 714400 715521 ENST00000608587.1 1 1122 MSTRG.13 RP11-809C18.4 0.000000 0.000000 +53 chr10 + 789932 790898 ENST00000412695.1 2 424 ENSG00000231601.1 RP11-164C1.2 0.000000 0.000000 +54 chr10 - 855213 936689 MSTRG.14.2 18 6075 MSTRG.14 . 36.556293 56.782581 +55 chr10 - 855213 977680 MSTRG.14.1 18 8034 MSTRG.14 . 12.280252 19.074814 +56 chr10 - 855482 977680 MSTRG.14.3 18 5953 MSTRG.14 . 102.459686 159.149765 +57 chr10 - 855482 977680 MSTRG.14.4 19 7836 MSTRG.14 . 15.613827 24.252827 +58 chr10 - 855484 931702 ENST00000316157.3 17 5640 MSTRG.14 LARP4B 1.660912 2.579881 +59 chr10 - 857746 866870 ENST00000609318.1 4 4848 MSTRG.14 LARP4B 3.372008 5.237712 +60 chr10 - 858446 871256 ENST00000448368.1 6 1510 MSTRG.14 LARP4B 6.720763 10.439305 +61 chr10 - 860382 863829 ENST00000608970.1 3 699 MSTRG.14 LARP4B 5.093313 7.911400 +62 chr10 - 860702 861655 ENST00000469487.1 2 859 MSTRG.14 LARP4B 0.000000 0.000000 +63 chr10 - 909683 977680 ENST00000476529.1 6 853 MSTRG.14 LARP4B 5.479975 8.512000 +64 chr10 - 909719 977680 ENST00000406525.2 6 797 MSTRG.14 LARP4B 0.000000 0.000000 +65 chr10 - 910094 977680 ENST00000481118.1 5 685 MSTRG.14 LARP4B 0.000000 0.000000 +66 chr10 - 910181 949455 ENST00000412411.1 5 432 MSTRG.14 LARP4B 0.000000 0.000000 +67 chr10 + 978966 988683 ENST00000435531.1 3 407 ENSG00000229869.1 RP11-363N22.2 0.000000 0.000000 +68 chr10 - 1017097 1034281 ENST00000381466.1 2 1875 ENSG00000205740.1 AL359878.1 1.184538 1.839933 +69 chr10 + 1034338 1065876 ENST00000360803.4 17 4696 MSTRG.15 GTPBP4 437.860321 680.124817 +70 chr10 + 1034402 1056460 ENST00000491635.1 11 2223 MSTRG.15 GTPBP4 22.134790 34.381783 +71 chr10 + 1034402 1065876 ENST00000538293.1 16 4528 MSTRG.15 GTPBP4 0.000000 0.000000 +72 chr10 + 1034646 1043248 ENST00000360059.5 5 756 MSTRG.15 GTPBP4 0.000000 0.000000 +73 chr10 + 1034655 1065876 ENST00000545048.1 17 4800 MSTRG.15 GTPBP4 83.919067 130.350784 +74 chr10 + 1051778 1053260 ENST00000491261.1 2 373 MSTRG.15 GTPBP4 2.616881 4.064779 +75 chr10 + 1058340 1065876 ENST00000483839.2 4 3335 MSTRG.15 GTPBP4 1.121848 1.742557 +76 chr10 - 1064847 1071799 ENST00000277517.1 5 1359 MSTRG.16 IDI2 0.000000 0.000000 +77 chr10 + 1068606 1090138 ENST00000536039.1 3 893 MSTRG.17 IDI2-AS1 0.000000 0.000000 +78 chr10 + 1068608 1090138 ENST00000420381.1 5 1187 MSTRG.17 IDI2-AS1 2.307206 3.583764 +79 chr10 + 1068608 1090138 ENST00000428780.2 4 1054 MSTRG.17 IDI2-AS1 0.000000 0.000000 +80 chr10 + 1068614 1081916 ENST00000434470.1 3 490 MSTRG.17 IDI2-AS1 0.000000 0.000000 +81 chr10 - 1085848 1095110 ENST00000381344.3 5 2301 MSTRG.18 IDI1 1337.575317 2077.644531 +82 chr10 - 1086843 1095110 ENST00000491735.1 4 1133 MSTRG.18 IDI1 129.618347 201.335083 +83 chr10 - 1088233 1088295 ENST00000459467.1 1 63 MSTRG.19 RNU7-163P 25.079365 38.955566 +84 chr10 - 1088489 1094803 ENST00000427898.1 3 907 MSTRG.18 IDI1 13.041369 20.257050 +85 chr10 - 1088572 1095110 ENST00000429642.1 4 1304 MSTRG.18 IDI1 8.160423 12.675517 +86 chr10 - 1088617 1095110 ENST00000482091.1 3 1264 MSTRG.18 IDI1 42.374790 65.820404 +87 chr10 + 1095478 1178557 ENST00000358220.1 14 4902 MSTRG.20 WDR37 4.557820 7.079623 +88 chr10 - 1095714 1102356 MSTRG.21.1 3 4349 MSTRG.21 . 5.630053 8.745114 +89 chr10 - 1096197 1102356 MSTRG.21.2 2 4097 MSTRG.21 . 20.441837 31.752134 +90 chr10 - 1096232 1100338 MSTRG.21.3 2 1740 MSTRG.21 . 2.145898 3.333205 +91 chr10 + 1102293 1178557 MSTRG.20.2 14 4826 MSTRG.20 . 0.000000 0.000000 +92 chr10 + 1102344 1142566 ENST00000381329.1 9 1307 MSTRG.20 WDR37 2.801299 4.351234 +93 chr10 + 1102344 1178557 MSTRG.20.3 14 4962 MSTRG.20 . 4.608822 7.158844 +94 chr10 + 1102382 1178557 MSTRG.20.5 14 4921 MSTRG.20 . 5.400261 8.388181 +95 chr10 + 1102420 1178557 MSTRG.20.6 13 4708 MSTRG.20 . 0.000000 0.000000 +96 chr10 + 1102713 1178557 MSTRG.20.7 14 4997 MSTRG.20 . 15.464252 24.020494 +97 chr10 + 1102713 1178557 MSTRG.20.8 14 4908 MSTRG.20 . 12.382258 19.233257 +98 chr10 + 1102743 1178557 MSTRG.20.9 12 4498 MSTRG.20 . 4.642578 7.211277 +99 chr10 + 1102750 1178557 MSTRG.20.10 12 4580 MSTRG.20 . 4.995825 7.759973 +100 chr10 + 1102763 1178557 MSTRG.20.11 14 4855 MSTRG.20 . 13.108129 20.360746 +101 chr10 + 1102798 1178557 ENST00000263150.4 14 4909 MSTRG.20 WDR37 8.529649 13.249032 +102 chr10 + 1120323 1142186 ENST00000436154.1 8 714 MSTRG.20 WDR37 0.000000 0.000000 +103 chr10 + 1169747 1178557 ENST00000482165.1 4 3951 MSTRG.20 WDR37 1.812446 2.815257 +104 chr10 + 1205708 1210612 ENST00000425630.1 3 2434 ENSG00000229205.2 LINC00200 0.000000 0.000000 +105 chr10 + 1205744 1206937 ENST00000583117.1 2 632 ENSG00000229205.2 LINC00200 0.000000 0.000000 +106 chr10 - 1228073 1779670 ENST00000381312.1 10 3606 MSTRG.22 ADARB2 0.000000 0.000000 +107 chr10 - 1228074 1246325 ENST00000381310.3 3 1835 MSTRG.22 ADARB2 0.000000 0.000000 +108 chr10 - 1228785 1232506 ENST00000474762.1 3 768 MSTRG.22 ADARB2 0.000000 0.000000 +109 chr10 - 1228983 1234186 ENST00000490172.1 3 599 MSTRG.22 ADARB2 0.000000 0.000000 +110 chr10 - 1229091 1246325 ENST00000381305.1 4 703 MSTRG.22 ADARB2 0.000000 0.000000 +111 chr10 - 1245386 1246325 ENST00000477140.1 2 697 MSTRG.22 ADARB2 0.000000 0.000000 +112 chr10 - 1261616 1282593 ENST00000469464.1 3 1741 MSTRG.22 ADARB2 0.000000 0.000000 +113 chr10 - 1403196 1403832 ENST00000432987.1 2 359 MSTRG.23 RP11-398B16.2 0.000000 0.000000 +114 chr10 + 1568832 1599179 ENST00000421697.2 2 637 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +115 chr10 + 1568958 1577868 ENST00000381301.3 3 625 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +116 chr10 - 2047667 2056542 ENST00000413603.1 3 2097 ENSG00000234962.1 LINC00700 0.000000 0.000000 +117 chr10 - 2054459 2056542 ENST00000438372.1 3 777 ENSG00000234962.1 LINC00700 0.000000 0.000000 +118 chr10 - 2054847 2055605 ENST00000454424.1 2 484 ENSG00000234962.1 LINC00700 0.000000 0.000000 +119 chr10 + 2114039 2123291 ENST00000435539.1 2 432 ENSG00000226694.2 RP11-69C17.2 0.000000 0.000000 +120 chr10 + 2140361 2140463 ENST00000517189.1 1 103 ENSG00000252998.1 RNU6-889P 0.000000 0.000000 +121 chr10 + 2208526 2211654 ENST00000421077.1 2 2321 ENSG00000227912.1 RP11-69C17.3 0.000000 0.000000 +122 chr10 - 2211334 2231668 ENST00000418524.2 5 587 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +123 chr10 - 2211341 2218626 ENST00000436003.2 2 196 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +124 chr10 + 2241581 2241682 ENST00000390854.1 1 102 ENSG00000212156.1 RNU6-576P 0.000000 0.000000 +125 chr10 - 2347277 2357269 ENST00000418295.1 3 742 ENSG00000234556.1 LINC00701 0.000000 0.000000 +126 chr10 - 2488447 2489546 ENST00000414107.1 2 756 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +127 chr10 - 2488447 2489546 ENST00000441907.1 2 764 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +128 chr10 - 2488452 2489546 ENST00000439973.1 2 714 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +129 chr10 - 2495329 2495418 ENST00000580586.1 1 90 ENSG00000264261.1 AC024908.1 0.000000 0.000000 +130 chr10 + 2541913 2542762 ENST00000431209.1 2 332 ENSG00000237500.1 RP11-526P5.1 0.000000 0.000000 +131 chr10 + 2543975 2609431 ENST00000438753.1 2 918 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +132 chr10 + 2543995 2579817 ENST00000437289.1 2 320 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +133 chr10 + 2978213 2978633 ENST00000419388.1 1 421 ENSG00000231743.1 RP11-89K18.1 0.000000 0.000000 +134 chr10 + 3052723 3055303 ENST00000439575.1 3 608 ENSG00000234182.1 RP11-118K6.2 0.000000 0.000000 +135 chr10 - 3107576 3109169 MSTRG.25.1 2 1232 MSTRG.25 . 3.825523 5.942153 +136 chr10 - 3107616 3108582 ENST00000607898.1 1 967 MSTRG.25 RP11-118K6.3 2.715569 4.218071 +137 chr10 + 3108525 3143746 ENST00000607886.1 4 432 MSTRG.26 PFKP 0.000000 0.000000 +138 chr10 + 3109712 3178985 ENST00000381125.4 22 2645 MSTRG.26 PFKP 1298.841919 2017.480225 +139 chr10 + 3109864 3111581 ENST00000495715.1 2 152 MSTRG.26 PFKP 1.440726 2.237868 +140 chr10 + 3110819 3178985 ENST00000381075.2 24 2769 MSTRG.26 PFKP 2.628494 4.082818 +141 chr10 + 3111425 3146136 ENST00000421751.1 5 665 MSTRG.26 PFKP 5.203611 8.082726 +142 chr10 + 3112437 3147693 ENST00000407806.2 7 733 MSTRG.26 PFKP 1.167216 1.813027 +143 chr10 + 3146916 3155710 ENST00000415005.1 8 1142 MSTRG.26 PFKP 7.245889 11.254978 +144 chr10 + 3146939 3151672 ENST00000468050.1 6 511 MSTRG.26 PFKP 3.354734 5.210880 +145 chr10 + 3147071 3149501 ENST00000460445.1 3 628 MSTRG.26 PFKP 4.290225 6.663971 +146 chr10 + 3155650 3172175 ENST00000413079.1 5 538 MSTRG.26 PFKP 12.722329 19.761488 +147 chr10 + 3171199 3178985 ENST00000381072.1 6 1698 MSTRG.26 PFKP 22.401976 34.796803 +148 chr10 + 3175427 3179904 ENST00000433193.1 4 453 MSTRG.26 PFKP 2.293064 3.561797 +149 chr10 - 3179920 3180807 ENST00000490510.1 2 778 MSTRG.27 PITRM1 1.461410 2.269996 +150 chr10 - 3179920 3191591 ENST00000464395.1 9 3240 MSTRG.27 PITRM1 33.353264 51.807343 +151 chr10 - 3179920 3215003 MSTRG.27.1 25 3258 MSTRG.27 . 229.124420 355.897034 +152 chr10 - 3179922 3215003 ENST00000224949.4 27 3454 MSTRG.27 PITRM1 122.313606 189.988693 +153 chr10 - 3179922 3215003 ENST00000380989.2 27 3457 MSTRG.27 PITRM1 91.401100 141.972565 +154 chr10 - 3179926 3200345 ENST00000380994.1 16 2645 MSTRG.27 PITRM1 10.103261 15.693311 +155 chr10 - 3180016 3215003 ENST00000451104.2 24 3059 MSTRG.27 PITRM1 0.000000 0.000000 +156 chr10 - 3180883 3186558 ENST00000455371.1 4 673 MSTRG.27 PITRM1 2.057491 3.195884 +157 chr10 - 3183700 3190255 ENST00000451454.1 7 883 MSTRG.27 PITRM1 2.883049 4.478216 +158 chr10 + 3183824 3206477 ENST00000601046.1 4 577 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +159 chr10 + 3183824 3210164 ENST00000598280.1 4 601 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +160 chr10 + 3183864 3190814 ENST00000441377.1 4 3998 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +161 chr10 + 3185241 3190814 ENST00000430356.2 3 3823 MSTRG.28 PITRM1-AS1 1.617808 2.512928 +162 chr10 - 3185675 3187908 ENST00000424714.1 3 489 MSTRG.27 PITRM1 3.358446 5.216646 +163 chr10 - 3193368 3201234 ENST00000430362.1 6 802 MSTRG.27 PITRM1 2.190066 3.401811 +164 chr10 - 3205324 3207526 ENST00000488065.1 2 851 MSTRG.27 PITRM1 6.626359 10.292667 +165 chr10 + 3266008 3269599 ENST00000445932.1 3 597 ENSG00000236968.1 RP11-298E9.5 0.000000 0.000000 +166 chr10 - 3282563 3299466 ENST00000417149.1 4 454 MSTRG.29 RP11-298E9.6 0.000000 0.000000 +167 chr10 + 3291138 3291944 MSTRG.30.1 2 618 MSTRG.30 . 1.546926 2.402827 +168 chr10 + 3308195 3309207 ENST00000436340.1 2 463 ENSG00000227338.1 RP11-195B3.1 0.000000 0.000000 +169 chr10 - 3474575 3478062 MSTRG.31.1 3 2349 MSTRG.31 . 0.000000 0.000000 +170 chr10 + 3494616 3543443 MSTRG.32.1 2 851 MSTRG.32 . 0.000000 0.000000 +171 chr10 - 3529086 3545030 ENST00000413993.1 5 832 MSTRG.33 RP11-482E14.1 0.000000 0.000000 +172 chr10 - 3574286 3579223 ENST00000426811.1 2 430 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +173 chr10 - 3577304 3579049 ENST00000413757.1 2 372 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +174 chr10 - 3599384 3614279 MSTRG.34.1 3 496 MSTRG.34 . 0.000000 0.000000 +175 chr10 - 3710520 3710836 MSTRG.35.1 1 317 MSTRG.35 . 2.485804 3.861179 +176 chr10 + 3793259 3805418 ENST00000421629.2 6 759 ENSG00000229672.2 RP11-184A2.3 0.000000 0.000000 +177 chr10 + 3810107 3810943 ENST00000415358.1 2 313 ENSG00000228353.1 RP11-184A2.2 0.000000 0.000000 +178 chr10 - 3818188 3822421 ENST00000461124.1 3 776 MSTRG.36 KLF6 0.000000 0.000000 +179 chr10 - 3818188 3827473 ENST00000497571.1 4 4662 MSTRG.36 KLF6 238.577484 370.580414 +180 chr10 - 3818189 3827473 ENST00000542957.1 3 4537 MSTRG.36 KLF6 105.895538 164.486649 +181 chr10 - 3821239 3824406 ENST00000173785.4 3 1088 MSTRG.36 KLF6 4.177274 6.488525 +182 chr10 - 3821742 3823832 ENST00000492125.1 2 1576 MSTRG.36 KLF6 16.580317 25.754066 +183 chr10 - 3822519 3827473 ENST00000469435.1 2 2257 MSTRG.36 KLF6 16.324131 25.356136 +184 chr10 - 3824000 3827473 ENST00000380946.3 3 842 MSTRG.36 KLF6 1.938278 3.010711 +185 chr10 + 3827756 3829407 MSTRG.37.1 1 1652 MSTRG.37 . 5.555085 8.628668 +186 chr10 + 3876142 3876920 ENST00000413339.1 2 536 ENSG00000230573.1 RP11-464C19.2 0.000000 0.000000 +187 chr10 + 3976711 3978005 ENST00000432452.2 2 591 ENSG00000226005.3 RP11-464C19.3 0.000000 0.000000 +188 chr10 + 4067132 4070586 ENST00000455525.1 2 633 ENSG00000227101.1 RP11-433J20.2 0.000000 0.000000 +189 chr10 + 4093918 4131205 ENST00000455199.1 4 2287 ENSG00000236990.1 RP11-433J20.1 0.000000 0.000000 +190 chr10 - 4243333 4286104 ENST00000608792.1 3 6300 MSTRG.38 LINC00702 0.000000 0.000000 +191 chr10 - 4277752 4285879 ENST00000454470.1 2 407 MSTRG.38 LINC00702 0.000000 0.000000 +192 chr10 - 4277752 4286104 MSTRG.38.2 3 497 MSTRG.38 . 0.000000 0.000000 +193 chr10 - 4285142 4285981 ENST00000418372.1 2 446 MSTRG.38 LINC00702 1.974340 3.066726 +194 chr10 + 4289424 4299004 MSTRG.39.1 2 1122 MSTRG.39 . 0.000000 0.000000 +195 chr10 + 4426438 4452804 ENST00000454152.1 2 2390 ENSG00000224382.1 LINC00703 0.000000 0.000000 +196 chr10 + 4448694 4451443 ENST00000434902.1 2 869 ENSG00000224382.1 LINC00703 0.000000 0.000000 +197 chr10 - 4457497 4468371 ENST00000420082.1 4 691 ENSG00000230096.1 RP11-34C15.2 0.000000 0.000000 +198 chr10 + 4557144 4557249 ENST00000384396.1 1 106 ENSG00000207124.1 RNU6-163P 0.000000 0.000000 +199 chr10 - 4621911 4720444 MSTRG.40.1 3 2062 MSTRG.40 . 0.000000 0.000000 +200 chr10 - 4692377 4720444 ENST00000430998.2 4 1576 MSTRG.40 LINC00704 0.000000 0.000000 +201 chr10 - 4693295 4699117 ENST00000443994.1 3 543 MSTRG.40 LINC00704 0.000000 0.000000 +202 chr10 - 4693353 4720444 ENST00000449712.1 5 823 MSTRG.40 LINC00704 0.000000 0.000000 +203 chr10 + 4697619 4704611 ENST00000417883.2 3 1745 MSTRG.41 LINC00705 0.000000 0.000000 +204 chr10 - 4728501 4729798 MSTRG.42.1 3 423 MSTRG.42 . 4.153664 6.451851 +205 chr10 - 4787905 4809844 MSTRG.43.1 3 4588 MSTRG.43 . 1.012358 1.572487 +206 chr10 - 4787905 4823145 MSTRG.43.2 3 3442 MSTRG.43 . 1.472082 2.286573 +207 chr10 - 4788110 4809844 MSTRG.43.4 3 2522 MSTRG.43 . 1.685340 2.617825 +208 chr10 - 4788110 4823145 MSTRG.43.3 3 1354 MSTRG.43 . 1.011851 1.571700 +209 chr10 - 4790140 4809844 MSTRG.43.5 2 3691 MSTRG.43 . 0.000000 0.000000 +210 chr10 - 4799235 4809844 MSTRG.43.6 2 3857 MSTRG.43 . 0.000000 0.000000 +211 chr10 + 4828821 4879775 ENST00000533295.1 6 754 MSTRG.44 AKR1E2 0.000000 0.000000 +212 chr10 + 4828901 4882018 ENST00000462718.3 6 693 MSTRG.44 AKR1E2 0.000000 0.000000 +213 chr10 + 4868330 4890575 MSTRG.44.3 7 2727 MSTRG.44 . 5.818754 9.038222 +214 chr10 + 4868359 4883976 MSTRG.44.4 6 3318 MSTRG.44 . 2.085261 3.239018 +215 chr10 + 4868369 4890575 ENST00000474119.1 10 1947 MSTRG.44 AKR1E2 0.000000 0.000000 +216 chr10 + 4868426 4890575 ENST00000463345.1 10 1976 MSTRG.44 AKR1E2 4.623990 7.182405 +217 chr10 + 4868430 4889491 MSTRG.44.7 7 861 MSTRG.44 . 1.508764 2.343550 +218 chr10 + 4868446 4890575 ENST00000298375.7 10 1887 MSTRG.44 AKR1E2 6.657186 10.340550 +219 chr10 + 4868447 4888733 ENST00000525281.1 6 1383 MSTRG.44 AKR1E2 1.464745 2.275176 +220 chr10 + 4868478 4879773 ENST00000525627.1 3 334 MSTRG.44 AKR1E2 0.000000 0.000000 +221 chr10 + 4868488 4888733 MSTRG.44.16 9 3214 MSTRG.44 . 5.742553 8.919860 +222 chr10 + 4868488 4889491 ENST00000532248.1 7 847 MSTRG.44 AKR1E2 3.365341 5.227356 +223 chr10 + 4868488 4889491 MSTRG.44.11 8 1894 MSTRG.44 . 4.197853 6.520490 +224 chr10 + 4868488 4890575 ENST00000334019.4 8 1674 MSTRG.44 AKR1E2 5.383294 8.361825 +225 chr10 + 4868488 4890575 ENST00000345253.5 7 1551 MSTRG.44 AKR1E2 3.585149 5.568782 +226 chr10 + 4868488 4890575 MSTRG.44.12 8 2029 MSTRG.44 . 5.708348 8.866729 +227 chr10 + 4868488 4890575 MSTRG.44.13 10 1897 MSTRG.44 . 5.431621 8.436892 +228 chr10 + 4868488 4995278 MSTRG.44.14 15 2744 MSTRG.44 . 3.300627 5.126836 +229 chr10 + 4868488 4995278 MSTRG.44.17 14 1627 MSTRG.44 . 0.000000 0.000000 +230 chr10 + 4868488 5025475 MSTRG.44.15 20 9882 MSTRG.44 . 10.144997 15.758138 +231 chr10 + 4875547 4888733 ENST00000441590.1 5 1218 MSTRG.44 AKR1E2 1.302427 2.023049 +232 chr10 + 4875592 4884049 ENST00000525572.1 5 506 MSTRG.44 AKR1E2 0.000000 0.000000 +233 chr10 + 4881976 4889679 ENST00000487985.1 4 523 MSTRG.44 AKR1E2 0.000000 0.000000 +234 chr10 - 4914093 4934167 ENST00000432950.1 9 983 MSTRG.45 AKR1C6P 0.000000 0.000000 +235 chr10 - 4927673 4934167 ENST00000281339.5 5 495 MSTRG.45 AKR1C6P 0.000000 0.000000 +236 chr10 + 4934796 5025475 ENST00000434459.2 14 7354 MSTRG.44 AKR1C1 0.000000 0.000000 +237 chr10 - 5004628 5004760 ENST00000459095.1 1 133 MSTRG.46 U8 0.000000 0.000000 +238 chr10 + 5005445 5025475 ENST00000380872.4 9 6705 MSTRG.44 AKR1C1 2.211931 3.435774 +239 chr10 + 5005445 5025475 ENST00000477661.1 8 7970 MSTRG.44 AKR1C1 0.000000 0.000000 +240 chr10 + 5005641 5014941 ENST00000442997.1 7 746 MSTRG.44 AKR1C1 1.771695 2.751959 +241 chr10 + 5005981 5012133 ENST00000380859.1 6 858 MSTRG.44 AKR1C1 1.800070 2.796034 +242 chr10 + 5007683 5010500 ENST00000476100.1 2 1973 MSTRG.44 AKR1C1 1.827990 2.839401 +243 chr10 - 5029967 5046215 ENST00000380753.4 9 3381 MSTRG.47 AKR1C2 0.000000 0.000000 +244 chr10 - 5029967 5060223 MSTRG.47.1 12 3914 MSTRG.47 . 5.921243 9.197417 +245 chr10 - 5030125 5060223 MSTRG.47.3 9 3083 MSTRG.47 . 0.000000 0.000000 +246 chr10 - 5031626 5046114 ENST00000421196.3 8 1543 MSTRG.47 AKR1C2 2.612941 4.058660 +247 chr10 - 5031966 5060223 ENST00000407674.1 11 1605 MSTRG.47 AKR1C2 27.253925 42.333294 +248 chr10 - 5031981 5046215 ENST00000460124.1 8 2639 MSTRG.47 AKR1C2 0.000000 0.000000 +249 chr10 + 5037680 5039586 ENST00000451575.2 3 445 MSTRG.48 RP11-499O7.7 1.936475 3.007910 +250 chr10 - 5038026 5060223 ENST00000604507.1 7 821 MSTRG.47 AKR1C2 0.000000 0.000000 +251 chr10 + 5038074 5039586 ENST00000440414.1 3 316 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +252 chr10 - 5042103 5046114 ENST00000455190.1 4 1006 MSTRG.47 AKR1C2 0.000000 0.000000 +253 chr10 - 5042495 5046114 ENST00000604184.1 4 614 MSTRG.47 AKR1C2 0.000000 0.000000 +254 chr10 + 5046902 5047034 ENST00000459141.1 1 133 MSTRG.49 U8 0.000000 0.000000 +255 chr10 - 5048187 5060223 ENST00000604428.1 4 600 MSTRG.47 AKR1C2 0.000000 0.000000 +256 chr10 - 5048654 5060223 ENST00000604711.1 4 673 MSTRG.47 AKR1C2 0.000000 0.000000 +257 chr10 - 5052655 5058084 ENST00000603073.1 3 579 MSTRG.47 AKR1C2 0.000000 0.000000 +258 chr10 - 5055499 5057426 ENST00000604439.1 2 646 MSTRG.47 AKR1C2 0.000000 0.000000 +259 chr10 + 5077263 5149878 MSTRG.50.1 11 1895 MSTRG.50 . 404.699615 628.616516 +260 chr10 + 5077263 5149878 MSTRG.50.2 10 1725 MSTRG.50 . 298.271423 463.302490 +261 chr10 + 5077263 5149878 MSTRG.50.3 10 1739 MSTRG.50 . 374.994141 582.475281 +262 chr10 + 5077546 5144402 ENST00000605781.1 6 859 MSTRG.50 AKR1C3 203.403702 315.945282 +263 chr10 + 5077546 5149878 MSTRG.50.4 10 1412 MSTRG.50 . 1069.876709 1661.830566 +264 chr10 + 5077549 5139742 ENST00000470862.2 6 1013 MSTRG.50 AKR1C3 33.783756 52.476025 +265 chr10 + 5077550 5139742 ENST00000480822.1 5 808 MSTRG.50 AKR1C3 86.160240 133.831970 +266 chr10 - 5090055 5090173 ENST00000515931.1 1 119 MSTRG.51 U8 0.000000 0.000000 +267 chr10 + 5090981 5141641 ENST00000602997.1 6 671 MSTRG.50 AKR1C3 30.897593 47.992970 +268 chr10 + 5091004 5093862 ENST00000451627.1 2 125 MSTRG.50 RP11-499O7.4 1.283475 1.993611 +269 chr10 + 5119830 5149878 ENST00000605149.1 9 1411 MSTRG.50 AKR1C3 319.916809 496.924072 +270 chr10 + 5119973 5149878 ENST00000439082.2 9 1268 MSTRG.50 AKR1C3 8.118563 12.610496 +271 chr10 - 5135600 5135735 ENST00000459536.1 1 136 MSTRG.52 U8 1.227940 1.907349 +272 chr10 + 5135985 5149878 ENST00000380554.3 9 1807 MSTRG.50 AKR1C3 1320.781738 2051.559082 +273 chr10 + 5136606 5140368 ENST00000480697.2 3 1026 MSTRG.50 AKR1C3 12.701533 19.729185 +274 chr10 + 5136610 5142085 ENST00000605322.1 3 846 MSTRG.50 AKR1C3 27.105284 42.102409 +275 chr10 + 5138337 5139742 ENST00000603312.1 2 550 MSTRG.50 AKR1C3 42.781586 66.452278 +276 chr10 + 5147467 5149878 ENST00000603484.1 2 629 MSTRG.50 AKR1C3 15.142037 23.520000 +277 chr10 + 5152190 5156102 MSTRG.53.1 1 3913 MSTRG.53 . 4.709430 7.315118 +278 chr10 - 5164279 5177418 ENST00000427165.1 5 609 MSTRG.54 AKR1C5P 0.000000 0.000000 +279 chr10 - 5164295 5166124 MSTRG.54.2 3 1240 MSTRG.54 . 0.000000 0.000000 +280 chr10 - 5179314 5227150 MSTRG.55.1 10 1363 MSTRG.55 . 0.000000 0.000000 +281 chr10 - 5196335 5202333 ENST00000473890.1 5 645 MSTRG.55 AKR1CL1 0.000000 0.000000 +282 chr10 - 5196655 5202333 ENST00000465430.1 3 1716 MSTRG.55 AKR1CL1 0.000000 0.000000 +283 chr10 - 5202775 5227150 ENST00000472691.1 5 595 MSTRG.55 AKR1CL1 0.000000 0.000000 +284 chr10 - 5202775 5227150 ENST00000488756.1 4 539 MSTRG.55 AKR1CL1 0.000000 0.000000 +285 chr10 - 5202775 5326531 MSTRG.55.4 16 3182 MSTRG.55 . 0.000000 0.000000 +286 chr10 - 5203694 5227150 ENST00000334314.3 4 498 MSTRG.55 AKR1CL1 0.000000 0.000000 +287 chr10 - 5226975 5244449 ENST00000445191.1 2 81 MSTRG.55 AKR1CL1 0.000000 0.000000 +288 chr10 + 5237425 5238914 ENST00000469875.2 2 837 MSTRG.56 AKR1C4 0.000000 0.000000 +289 chr10 + 5237426 5260912 ENST00000380448.1 11 1414 MSTRG.56 AKR1C4 3.047803 4.734127 +290 chr10 - 5237847 5237936 ENST00000516100.1 1 90 MSTRG.57 U8 0.000000 0.000000 +291 chr10 + 5238798 5260912 ENST00000263126.1 9 1194 MSTRG.56 AKR1C4 0.000000 0.000000 +292 chr10 + 5249132 5249705 ENST00000441452.1 1 574 MSTRG.58 RP11-445P17.6 0.000000 0.000000 +293 chr10 - 5257183 5333847 MSTRG.55.9 13 4052 MSTRG.55 . 4.706596 7.310716 +294 chr10 + 5276321 5305371 ENST00000428920.2 2 680 MSTRG.59 RP11-445P17.3 0.000000 0.000000 +295 chr10 - 5305897 5333847 MSTRG.55.10 11 2734 MSTRG.55 . 2.800245 4.349597 +296 chr10 - 5305973 5333847 MSTRG.55.11 10 2491 MSTRG.55 . 1.607815 2.497406 +297 chr10 - 5306256 5326531 MSTRG.55.12 8 1358 MSTRG.55 . 0.000000 0.000000 +298 chr10 - 5307136 5326531 MSTRG.55.13 6 2330 MSTRG.55 . 3.209412 4.985153 +299 chr10 - 5307996 5313416 ENST00000449457.1 2 909 MSTRG.55 RP11-445P17.8 0.000000 0.000000 +300 chr10 - 5317136 5330433 ENST00000305623.8 8 895 MSTRG.55 AKR1C7P 0.000000 0.000000 +301 chr10 - 5317169 5327975 ENST00000432689.2 6 685 MSTRG.55 AKR1C7P 0.000000 0.000000 +302 chr10 - 5319027 5326531 MSTRG.55.17 4 1603 MSTRG.55 . 3.335771 5.181425 +303 chr10 - 5346394 5346828 ENST00000451325.1 1 435 ENSG00000223987.1 RP11-445P17.5 0.000000 0.000000 +304 chr10 + 5406972 5416169 ENST00000380433.3 2 714 ENSG00000178473.5 UCN3 0.000000 0.000000 +305 chr10 - 5435061 5446793 ENST00000380419.3 4 1798 MSTRG.60 TUBAL3 0.000000 0.000000 +306 chr10 - 5435232 5446793 ENST00000479328.1 4 1507 MSTRG.60 TUBAL3 0.000000 0.000000 +307 chr10 + 5454514 5500426 ENST00000355029.4 12 3402 MSTRG.61 NET1 175.681610 272.884796 +308 chr10 + 5455752 5500426 ENST00000542715.1 12 3184 MSTRG.61 NET1 0.000000 0.000000 +309 chr10 + 5488572 5494883 ENST00000486354.1 4 622 MSTRG.61 NET1 0.000000 0.000000 +310 chr10 + 5488572 5496485 ENST00000449083.1 4 637 MSTRG.61 NET1 0.000000 0.000000 +311 chr10 + 5488574 5500426 ENST00000380359.3 10 3253 MSTRG.61 NET1 161.036270 250.136292 +312 chr10 + 5494382 5495116 ENST00000465087.1 2 403 MSTRG.61 NET1 2.257350 3.506323 +313 chr10 + 5496344 5498493 ENST00000484741.1 3 757 MSTRG.61 NET1 0.000000 0.000000 +314 chr10 - 5540658 5541533 ENST00000380332.3 1 876 ENSG00000178372.6 CALML5 0.000000 0.000000 +315 chr10 - 5556207 5565140 ENST00000543008.1 2 4531 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +316 chr10 - 5559244 5568209 ENST00000542093.1 3 560 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +317 chr10 - 5559332 5568204 ENST00000545372.1 4 579 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +318 chr10 + 5566924 5568225 ENST00000315238.1 1 1302 ENSG00000178363.3 CALML3 0.000000 0.000000 +319 chr10 - 5566939 5567705 ENST00000442008.2 2 595 ENSG00000256462.1 RP11-116G8.5 0.000000 0.000000 +320 chr10 - 5592096 5592862 MSTRG.62.1 2 505 MSTRG.62 . 0.000000 0.000000 +321 chr10 - 5598987 5601960 MSTRG.63.1 3 464 MSTRG.63 . 0.000000 0.000000 +322 chr10 - 5636951 5638081 MSTRG.64.1 2 738 MSTRG.64 . 0.000000 0.000000 +323 chr10 - 5636954 5638081 ENST00000478294.1 2 697 MSTRG.64 RP13-463N16.6 1.165511 1.810379 +324 chr10 - 5650438 5652756 ENST00000425246.1 5 613 ENSG00000231483.1 RP11-336A10.5 0.000000 0.000000 +325 chr10 - 5658825 5660124 ENST00000427341.1 3 657 ENSG00000228951.1 RP11-336A10.4 0.000000 0.000000 +326 chr10 + 5666894 5667089 ENST00000441526.1 1 196 ENSG00000228685.1 RP11-336A10.7 0.000000 0.000000 +327 chr10 + 5673426 5673716 ENST00000495609.2 1 291 ENSG00000240577.2 RN7SL445P 0.000000 0.000000 +328 chr10 - 5680830 5683924 ENST00000493897.1 3 832 MSTRG.65 ASB13 0.000000 0.000000 +329 chr10 - 5680831 5708558 ENST00000357700.6 6 2716 MSTRG.65 ASB13 119.696587 185.923706 +330 chr10 - 5680831 5708558 ENST00000459912.1 7 2797 MSTRG.65 ASB13 6.859410 10.654664 +331 chr10 - 5680831 5708558 ENST00000479033.1 5 2565 MSTRG.65 ASB13 4.398476 6.832116 +332 chr10 - 5690935 5693531 ENST00000482921.1 2 489 MSTRG.65 ASB13 0.000000 0.000000 +333 chr10 + 5726801 5806473 ENST00000328090.5 21 9396 MSTRG.66 FAM208B 27.859018 43.273178 +334 chr10 + 5726801 5806473 MSTRG.66.1 24 9749 MSTRG.66 . 28.970562 44.999729 +335 chr10 + 5726801 5806473 MSTRG.66.2 23 9657 MSTRG.66 . 27.136232 42.150482 +336 chr10 + 5726801 5806473 MSTRG.66.3 21 9226 MSTRG.66 . 20.874359 32.423965 +337 chr10 + 5726801 5806473 MSTRG.66.4 24 9644 MSTRG.66 . 24.367687 37.850124 +338 chr10 + 5726801 5806473 MSTRG.66.5 20 9134 MSTRG.66 . 25.500788 39.610161 +339 chr10 + 5726801 5806473 MSTRG.66.6 22 9511 MSTRG.66 . 25.857563 40.164333 +340 chr10 + 5726801 5806473 MSTRG.66.7 23 9498 MSTRG.66 . 21.621717 33.584831 +341 chr10 + 5726905 5754502 ENST00000477043.1 3 514 MSTRG.66 FAM208B 0.000000 0.000000 +342 chr10 + 5726905 5756170 ENST00000473789.1 4 537 MSTRG.66 FAM208B 0.000000 0.000000 +343 chr10 + 5726911 5762631 ENST00000496681.1 4 522 MSTRG.66 FAM208B 0.000000 0.000000 +344 chr10 + 5726928 5762631 ENST00000480839.2 5 597 MSTRG.66 FAM208B 0.000000 0.000000 +345 chr10 + 5734779 5754881 ENST00000532424.1 4 479 MSTRG.66 FAM208B 0.000000 0.000000 +346 chr10 + 5741411 5751626 ENST00000482419.1 2 424 MSTRG.66 FAM208B 2.171739 3.373344 +347 chr10 + 5741456 5756170 ENST00000463468.1 4 560 MSTRG.66 FAM208B 0.000000 0.000000 +348 chr10 + 5751589 5756537 ENST00000527124.1 3 574 MSTRG.66 FAM208B 6.222338 9.665106 +349 chr10 - 5754137 5786030 ENST00000411512.2 2 736 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +350 chr10 - 5754383 5756386 ENST00000596567.1 2 945 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +351 chr10 + 5768789 5773166 ENST00000532080.1 3 912 MSTRG.66 FAM208B 0.000000 0.000000 +352 chr10 + 5772625 5782460 ENST00000380270.3 2 1422 MSTRG.66 FAM208B 0.000000 0.000000 +353 chr10 + 5800892 5803764 ENST00000487196.1 2 576 MSTRG.66 FAM208B 1.384434 2.150430 +354 chr10 + 5802803 5806473 ENST00000459693.1 2 2611 MSTRG.66 FAM208B 1.133265 1.760291 +355 chr10 - 5807186 5855512 ENST00000380191.4 11 2412 MSTRG.68 GDI2 2517.867188 3910.981934 +356 chr10 - 5807192 5811352 ENST00000479928.1 3 2499 MSTRG.68 GDI2 20.530754 31.890247 +357 chr10 - 5807812 5827944 ENST00000447751.1 6 893 MSTRG.68 GDI2 31.858858 49.486095 +358 chr10 - 5807884 5855512 ENST00000380132.4 12 1797 MSTRG.68 GDI2 104.397324 162.159485 +359 chr10 - 5807917 5855512 ENST00000380181.3 10 1546 MSTRG.68 GDI2 181.859802 282.481293 +360 chr10 - 5815805 5855512 ENST00000456041.1 7 1080 MSTRG.68 GDI2 15.188202 23.591705 +361 chr10 + 5818034 5818821 ENST00000603087.1 1 788 MSTRG.69 NRBF2P5 0.000000 0.000000 +362 chr10 - 5827829 5855512 ENST00000418688.1 4 756 MSTRG.68 GDI2 0.000000 0.000000 +363 chr10 - 5827945 5856292 ENST00000608581.1 5 634 MSTRG.68 GDI2 15.904845 24.704863 +364 chr10 - 5827969 5884095 ENST00000380127.1 7 584 MSTRG.68 GDI2 0.000000 0.000000 +365 chr10 - 5836871 5855512 ENST00000609712.1 5 739 MSTRG.68 GDI2 9.149356 14.211618 +366 chr10 + 5855610 5858572 MSTRG.70.1 1 2963 MSTRG.70 . 7.486588 11.628854 +367 chr10 + 5855948 5858572 ENST00000608273.1 2 2444 MSTRG.70 RP11-318E3.9 0.000000 0.000000 +368 chr10 - 5902878 5931954 MSTRG.71.1 8 3707 MSTRG.71 . 5.447292 8.461233 +369 chr10 - 5902878 5931954 MSTRG.71.2 9 3232 MSTRG.71 . 13.934521 21.644373 +370 chr10 - 5902878 5931954 MSTRG.71.3 9 3684 MSTRG.71 . 16.102146 25.011328 +371 chr10 - 5903580 5931954 ENST00000380094.5 8 2831 MSTRG.71 ANKRD16 5.358978 8.324056 +372 chr10 - 5903768 5904654 ENST00000430852.1 2 586 MSTRG.71 RP11-318E3.4 0.000000 0.000000 +373 chr10 - 5918136 5931954 MSTRG.71.6 8 2285 MSTRG.71 . 10.360771 16.093300 +374 chr10 - 5920050 5931954 ENST00000380092.4 7 1766 MSTRG.71 ANKRD16 5.867415 9.113807 +375 chr10 - 5920085 5931954 ENST00000191063.8 6 1652 MSTRG.71 ANKRD16 4.677037 7.264802 +376 chr10 - 5924666 5930030 ENST00000492368.1 4 838 MSTRG.71 ANKRD16 4.475043 6.951046 +377 chr10 + 5931535 5979556 ENST00000397269.3 22 3665 MSTRG.72 FBXO18 0.000000 0.000000 +378 chr10 + 5932194 5979556 ENST00000362091.4 21 3560 MSTRG.72 FBXO18 73.945221 114.858490 +379 chr10 + 5932211 5953091 ENST00000470089.1 5 1153 MSTRG.72 FBXO18 7.064143 10.972674 +380 chr10 + 5932211 5979168 MSTRG.72.3 22 3206 MSTRG.72 . 17.825150 27.687654 +381 chr10 + 5932243 5948595 ENST00000462507.1 4 917 MSTRG.72 FBXO18 0.000000 0.000000 +382 chr10 + 5932243 5969504 MSTRG.72.7 20 2993 MSTRG.72 . 22.087158 34.307796 +383 chr10 + 5932243 5979556 MSTRG.72.5 20 3355 MSTRG.72 . 65.257423 101.363808 +384 chr10 + 5932243 5979556 MSTRG.72.6 23 4178 MSTRG.72 . 76.491203 118.813141 +385 chr10 + 5933788 5969504 MSTRG.72.9 19 8474 MSTRG.72 . 37.587376 58.384151 +386 chr10 + 5936349 5979556 ENST00000379999.5 22 3702 MSTRG.72 FBXO18 7.198242 11.180969 +387 chr10 + 5945129 5951257 ENST00000469009.1 5 943 MSTRG.72 FBXO18 0.000000 0.000000 +388 chr10 + 5948469 5951441 ENST00000494526.1 3 578 MSTRG.72 FBXO18 2.966584 4.607970 +389 chr10 + 5956141 5957907 ENST00000460453.1 2 634 MSTRG.72 FBXO18 11.508746 17.876438 +390 chr10 + 5959025 5959639 ENST00000489042.1 2 533 MSTRG.72 FBXO18 4.321190 6.712068 +391 chr10 + 5963309 5966471 ENST00000475867.1 3 1022 MSTRG.72 FBXO18 2.950650 4.583220 +392 chr10 + 5963317 5979168 ENST00000461504.1 9 912 MSTRG.72 FBXO18 12.741982 19.792013 +393 chr10 + 5965534 5969504 ENST00000485290.1 4 557 MSTRG.72 FBXO18 1.070628 1.662997 +394 chr10 + 5967227 5969504 ENST00000496013.1 2 336 MSTRG.72 FBXO18 1.432866 2.225659 +395 chr10 + 5967374 5970636 ENST00000479433.1 3 527 MSTRG.72 FBXO18 2.290560 3.557908 +396 chr10 + 5967374 5971829 ENST00000470353.1 3 681 MSTRG.72 FBXO18 1.888604 2.933553 +397 chr10 - 5976233 5987876 ENST00000397264.4 2 3499 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +398 chr10 - 5977257 5987876 MSTRG.73.2 2 615 MSTRG.73 . 0.000000 0.000000 +399 chr10 + 5978596 5979556 ENST00000481029.1 2 486 MSTRG.72 FBXO18 0.000000 0.000000 +400 chr10 - 5985453 5987876 ENST00000448685.1 2 685 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +401 chr10 - 5985467 5987876 ENST00000454321.1 2 545 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +402 chr10 - 5990855 6002530 ENST00000435171.2 4 659 MSTRG.74 IL15RA 0.000000 0.000000 +403 chr10 - 5990898 6010891 MSTRG.74.2 6 5050 MSTRG.74 . 0.000000 0.000000 +404 chr10 - 5990898 6010891 MSTRG.74.3 7 5029 MSTRG.74 . 0.000000 0.000000 +405 chr10 - 5990938 6019177 MSTRG.74.5 6 5123 MSTRG.74 . 0.000000 0.000000 +406 chr10 - 5990938 6020150 MSTRG.74.4 8 5520 MSTRG.74 . 0.000000 0.000000 +407 chr10 - 5994142 6020150 MSTRG.74.6 7 2163 MSTRG.74 . 0.000000 0.000000 +408 chr10 - 5994334 6019739 ENST00000379977.3 7 1812 MSTRG.74 IL15RA 0.000000 0.000000 +409 chr10 - 5994335 6019739 ENST00000397248.2 7 1811 MSTRG.74 IL15RA 1.298037 2.016230 +410 chr10 - 5994335 6019739 ENST00000397251.3 6 1616 MSTRG.74 IL15RA 0.000000 0.000000 +411 chr10 - 5994344 6020150 ENST00000525219.2 7 1841 MSTRG.74 IL15RA 1.863946 2.895252 +412 chr10 - 5994349 6020150 ENST00000534292.1 7 1836 MSTRG.74 IL15RA 0.000000 0.000000 +413 chr10 - 5994356 6020150 ENST00000379972.2 6 1631 MSTRG.74 IL15RA 0.000000 0.000000 +414 chr10 - 5994356 6020150 ENST00000532948.1 6 1730 MSTRG.74 IL15RA 0.000000 0.000000 +415 chr10 - 5994756 6019739 ENST00000528354.1 6 1291 MSTRG.74 IL15RA 0.000000 0.000000 +416 chr10 - 5994784 6005801 ENST00000447291.1 5 912 MSTRG.74 IL15RA 0.000000 0.000000 +417 chr10 - 5994861 6020150 ENST00000379974.1 5 1030 MSTRG.74 IL15RA 0.000000 0.000000 +418 chr10 - 5995008 6008302 ENST00000532039.1 6 679 MSTRG.74 IL15RA 0.000000 0.000000 +419 chr10 - 5995014 6019739 ENST00000397250.2 5 838 MSTRG.74 IL15RA 0.000000 0.000000 +420 chr10 - 5995115 6019739 ENST00000379971.1 5 857 MSTRG.74 IL15RA 0.000000 0.000000 +421 chr10 - 5995223 6019739 ENST00000397255.3 7 1043 MSTRG.74 IL15RA 0.000000 0.000000 +422 chr10 - 5995223 6019739 ENST00000530685.1 6 944 MSTRG.74 IL15RA 0.000000 0.000000 +423 chr10 - 5998341 6020150 ENST00000397246.3 7 1180 MSTRG.74 IL15RA 0.000000 0.000000 +424 chr10 - 6001717 6019739 ENST00000429135.2 4 801 MSTRG.74 IL15RA 0.000000 0.000000 +425 chr10 - 6002358 6019177 ENST00000453922.1 4 730 MSTRG.74 IL15RA 0.000000 0.000000 +426 chr10 - 6052652 6104288 ENST00000379959.3 8 3176 ENSG00000134460.11 IL2RA 0.000000 0.000000 +427 chr10 - 6054034 6104272 ENST00000379954.1 7 1562 ENSG00000134460.11 IL2RA 0.000000 0.000000 +428 chr10 - 6054760 6104253 ENST00000256876.6 8 1006 ENSG00000134460.11 IL2RA 0.000000 0.000000 +429 chr10 - 6059017 6059157 ENST00000516113.1 1 141 ENSG00000251922.1 SNORA14 0.000000 0.000000 +430 chr10 - 6061416 6067964 ENST00000447847.1 3 326 ENSG00000134460.11 IL2RA 0.000000 0.000000 +431 chr10 + 6067941 6078390 ENST00000440436.1 3 480 ENSG00000229664.1 RP11-536K7.5 0.000000 0.000000 +432 chr10 - 6113477 6113881 ENST00000397237.2 1 405 ENSG00000214015.3 RP11-414H17.2 0.000000 0.000000 +433 chr10 + 6130950 6159420 ENST00000379888.4 12 3332 MSTRG.75 RBM17 85.476387 132.769745 +434 chr10 + 6130962 6159420 MSTRG.75.2 12 4027 MSTRG.75 . 294.912476 458.085114 +435 chr10 + 6131017 6154324 ENST00000437845.2 7 873 MSTRG.75 RBM17 26.108276 40.553768 +436 chr10 + 6131034 6152090 ENST00000432931.1 7 842 MSTRG.75 RBM17 0.000000 0.000000 +437 chr10 + 6131309 6159420 ENST00000446108.1 12 3751 MSTRG.75 RBM17 26.769127 41.580261 +438 chr10 + 6138873 6152090 ENST00000418631.1 6 860 MSTRG.75 RBM17 8.209340 12.751499 +439 chr10 + 6146909 6148340 ENST00000467214.1 2 389 MSTRG.75 RBM17 16.538715 25.689447 +440 chr10 + 6146934 6154664 ENST00000447032.1 5 916 MSTRG.75 RBM17 69.697029 108.259811 +441 chr10 + 6150451 6154664 ENST00000481147.1 3 889 MSTRG.75 RBM17 20.122993 31.256876 +442 chr10 + 6154665 6159420 ENST00000476706.1 5 2618 MSTRG.75 RBM17 7.940454 12.333840 +443 chr10 + 6155326 6159420 ENST00000465906.1 3 2537 MSTRG.75 RBM17 14.704421 22.840254 +444 chr10 + 6155870 6159420 ENST00000467080.1 2 2460 MSTRG.75 RBM17 2.241421 3.481580 +445 chr10 + 6156110 6159420 ENST00000496762.1 2 3170 MSTRG.75 RBM17 7.518156 11.677889 +446 chr10 + 6171977 6172984 MSTRG.76.1 2 758 MSTRG.76 . 0.000000 0.000000 +447 chr10 + 6186881 6277495 ENST00000536985.1 12 3923 MSTRG.77 PFKFB3 0.000000 0.000000 +448 chr10 + 6186897 6277495 ENST00000379789.4 15 4157 MSTRG.77 PFKFB3 65.729446 102.097000 +449 chr10 + 6188279 6277495 ENST00000540253.1 15 4258 MSTRG.77 PFKFB3 0.000000 0.000000 +450 chr10 + 6191586 6191903 ENST00000364711.1 1 318 MSTRG.78 RN7SKP78 0.000000 0.000000 +451 chr10 + 6194159 6194240 ENST00000577482.1 1 82 MSTRG.79 MIR3155A 0.000000 0.000000 +452 chr10 - 6239575 6244656 ENST00000427630.1 2 438 MSTRG.80 RP11-414H17.5 0.000000 0.000000 +453 chr10 + 6244829 6270258 ENST00000317350.4 15 2010 MSTRG.77 PFKFB3 0.000000 0.000000 +454 chr10 + 6244829 6270258 ENST00000461744.1 16 2098 MSTRG.77 PFKFB3 0.000000 0.000000 +455 chr10 + 6244829 6277495 ENST00000379785.1 17 4623 MSTRG.77 PFKFB3 0.000000 0.000000 +456 chr10 + 6244829 6277495 ENST00000467491.1 18 4711 MSTRG.77 PFKFB3 0.000000 0.000000 +457 chr10 + 6244829 6277495 ENST00000477914.1 16 4636 MSTRG.77 PFKFB3 0.000000 0.000000 +458 chr10 + 6244829 6277495 ENST00000490474.1 17 4659 MSTRG.77 PFKFB3 5.627334 8.740891 +459 chr10 + 6244840 6273277 ENST00000379782.3 16 1974 MSTRG.77 PFKFB3 0.000000 0.000000 +460 chr10 + 6244863 6277495 ENST00000360521.2 16 4537 MSTRG.77 PFKFB3 5.323663 8.269201 +461 chr10 + 6244894 6277495 ENST00000379775.4 15 4483 MSTRG.77 PFKFB3 127.498581 198.042480 +462 chr10 + 6263367 6277495 ENST00000450232.1 5 3020 MSTRG.77 PFKFB3 2.617456 4.065672 +463 chr10 + 6264671 6268410 ENST00000487989.1 4 661 MSTRG.77 PFKFB3 0.000000 0.000000 +464 chr10 + 6266129 6277495 ENST00000414237.1 5 2955 MSTRG.77 PFKFB3 1.653518 2.568396 +465 chr10 + 6266129 6277495 ENST00000441697.1 2 2686 MSTRG.77 PFKFB3 2.346735 3.645164 +466 chr10 + 6266129 6277495 ENST00000475881.1 4 2978 MSTRG.77 PFKFB3 0.000000 0.000000 +467 chr10 - 6287694 6287794 ENST00000459607.1 1 101 ENSG00000238366.1 Y_RNA 0.000000 0.000000 +468 chr10 + 6319650 6377944 ENST00000399868.2 7 3086 MSTRG.81 RP11-563J2.2 0.000000 0.000000 +469 chr10 - 6335063 6336647 ENST00000440192.1 4 890 MSTRG.82 SDCBPP1 0.000000 0.000000 +470 chr10 + 6392278 6394723 ENST00000391437.1 1 2446 ENSG00000212743.1 DKFZP667F0711 0.000000 0.000000 +471 chr10 - 6469105 6622263 ENST00000263125.5 18 3285 MSTRG.83 PRKCQ 0.000000 0.000000 +472 chr10 - 6469134 6622263 ENST00000397176.2 17 3067 MSTRG.83 PRKCQ 0.000000 0.000000 +473 chr10 - 6469983 6622263 ENST00000539722.1 17 2346 MSTRG.83 PRKCQ 0.000000 0.000000 +474 chr10 + 6622381 6626261 ENST00000445427.1 2 1133 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +475 chr10 + 6622387 6626079 ENST00000455810.1 3 1009 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +476 chr10 + 6625638 6627674 ENST00000414894.1 2 398 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +477 chr10 + 6625641 6626261 ENST00000449648.1 2 422 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +478 chr10 + 6625767 6630358 ENST00000607982.1 3 677 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +479 chr10 + 6625767 6633059 ENST00000608526.1 5 666 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +480 chr10 + 6628186 6628882 ENST00000561822.1 1 697 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +481 chr10 + 6649249 6657912 ENST00000609627.1 3 378 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +482 chr10 + 6649283 6657921 ENST00000607996.1 5 531 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +483 chr10 + 6650310 6658414 ENST00000609346.1 4 938 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +484 chr10 + 6650338 6658359 ENST00000608453.1 3 587 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +485 chr10 + 6660678 6667308 ENST00000448835.2 4 500 ENSG00000225948.2 RP11-554I8.1 0.000000 0.000000 +486 chr10 + 6779344 6780988 ENST00000417112.1 2 917 MSTRG.85 RP11-554I8.2 4.217012 6.550249 +487 chr10 - 6816341 6821132 MSTRG.86.1 2 617 MSTRG.86 . 2.050243 3.184625 +488 chr10 + 6821558 6884868 MSTRG.87.1 4 5454 MSTRG.87 . 0.000000 0.000000 +489 chr10 + 6821560 6884868 ENST00000436383.1 5 3070 MSTRG.87 LINC00707 0.000000 0.000000 +490 chr10 - 6867825 6868186 ENST00000451996.1 1 362 MSTRG.88 AL392086.1 0.000000 0.000000 +491 chr10 - 6933419 6962434 ENST00000457632.1 3 299 ENSG00000234248.1 RP11-799O21.2 0.000000 0.000000 +492 chr10 - 7100287 7100507 MSTRG.89.1 1 221 MSTRG.89 . 4.143515 6.436087 +493 chr10 + 7139114 7139637 ENST00000420049.1 2 436 ENSG00000223581.1 RP11-393K12.2 0.000000 0.000000 +494 chr10 + 7196082 7196198 ENST00000604136.1 1 117 ENSG00000270811.1 RP11-393K12.4 0.000000 0.000000 +495 chr10 - 7200586 7451303 ENST00000361972.4 21 7922 MSTRG.90 SFMBT2 0.000000 0.000000 +496 chr10 - 7200586 7452983 MSTRG.90.1 21 7852 MSTRG.90 . 21.864225 33.961517 +497 chr10 - 7200586 7452983 MSTRG.90.2 21 8043 MSTRG.90 . 23.265406 36.137959 +498 chr10 - 7200600 7452983 MSTRG.90.4 21 8049 MSTRG.90 . 0.000000 0.000000 +499 chr10 - 7204249 7453450 ENST00000397167.1 21 4363 MSTRG.90 SFMBT2 0.000000 0.000000 +500 chr10 - 7326144 7453450 ENST00000379713.3 5 2404 MSTRG.90 SFMBT2 3.917466 6.084967 +501 chr10 - 7337068 7337252 ENST00000421389.1 1 185 MSTRG.91 RP5-1092K5.2 0.000000 0.000000 +502 chr10 - 7390104 7450707 ENST00000379711.2 5 692 MSTRG.90 SFMBT2 0.000000 0.000000 +503 chr10 - 7390249 7453450 ENST00000397160.3 5 678 MSTRG.90 SFMBT2 0.000000 0.000000 +504 chr10 - 7487520 7513904 ENST00000420395.1 4 557 ENSG00000232591.1 RP5-1031D4.2 0.000000 0.000000 +505 chr10 - 7528665 7528771 ENST00000384722.1 1 107 ENSG00000207453.1 RNU6-535P 0.000000 0.000000 +506 chr10 + 7575169 7578527 ENST00000414631.1 3 714 ENSG00000230121.1 RP11-385N23.1 0.000000 0.000000 +507 chr10 - 7601232 7708961 ENST00000256861.6 14 6749 MSTRG.92 ITIH5 0.000000 0.000000 +508 chr10 - 7601756 7708961 ENST00000397146.2 12 2194 MSTRG.92 ITIH5 0.000000 0.000000 +509 chr10 - 7604386 7664440 ENST00000298441.6 10 5734 MSTRG.92 ITIH5 0.000000 0.000000 +510 chr10 - 7605045 7708961 ENST00000446830.2 14 2936 MSTRG.92 ITIH5 0.000000 0.000000 +511 chr10 - 7608000 7612363 ENST00000473591.1 3 782 MSTRG.92 ITIH5 0.000000 0.000000 +512 chr10 - 7611125 7618854 ENST00000492668.1 3 1116 MSTRG.92 ITIH5 0.000000 0.000000 +513 chr10 - 7613368 7682818 ENST00000434980.1 9 2727 MSTRG.92 ITIH5 0.000000 0.000000 +514 chr10 - 7613368 7708961 ENST00000397145.2 12 3132 MSTRG.92 ITIH5 0.000000 0.000000 +515 chr10 - 7614735 7620667 ENST00000468389.1 3 1393 MSTRG.92 ITIH5 0.000000 0.000000 +516 chr10 - 7614735 7664440 ENST00000476417.1 6 6945 MSTRG.92 ITIH5 0.000000 0.000000 +517 chr10 - 7618855 7659245 ENST00000461751.1 7 999 MSTRG.92 ITIH5 0.000000 0.000000 +518 chr10 + 7745232 7791483 ENST00000358415.4 21 3193 ENSG00000151655.13 ITIH2 0.000000 0.000000 +519 chr10 + 7745309 7755346 ENST00000473227.1 5 654 ENSG00000151655.13 ITIH2 0.000000 0.000000 +520 chr10 + 7745331 7762864 ENST00000480387.1 6 573 ENSG00000151655.13 ITIH2 0.000000 0.000000 +521 chr10 + 7745343 7763660 ENST00000429820.1 7 767 ENSG00000151655.13 ITIH2 0.000000 0.000000 +522 chr10 + 7745363 7791302 ENST00000379587.4 20 2848 ENSG00000151655.13 ITIH2 0.000000 0.000000 +523 chr10 + 7771828 7774436 ENST00000477751.1 3 591 ENSG00000151655.13 ITIH2 0.000000 0.000000 +524 chr10 - 7792925 7829990 ENST00000379562.4 13 6394 MSTRG.93 KIN 24.800802 38.522881 +525 chr10 - 7795188 7808066 ENST00000498098.1 6 817 MSTRG.93 KIN 0.000000 0.000000 +526 chr10 - 7795188 7829990 MSTRG.93.2 14 3782 MSTRG.93 . 18.922712 29.392492 +527 chr10 - 7795188 7829990 MSTRG.93.3 13 3687 MSTRG.93 . 3.702389 5.750890 +528 chr10 - 7795188 7829990 MSTRG.93.4 13 3684 MSTRG.93 . 3.833382 5.954360 +529 chr10 - 7795276 7829990 ENST00000535925.1 14 1618 MSTRG.93 KIN 19.120646 29.699940 +530 chr10 - 7797777 7808347 ENST00000463666.1 6 699 MSTRG.93 KIN 0.000000 0.000000 +531 chr10 - 7797798 7808347 ENST00000471320.1 5 910 MSTRG.93 KIN 1.519333 2.359967 +532 chr10 - 7801234 7829990 ENST00000543003.1 11 1737 MSTRG.93 KIN 1.092006 1.696204 +533 chr10 - 7803196 7816854 ENST00000460089.1 6 626 MSTRG.93 KIN 3.185445 4.947925 +534 chr10 + 7830092 7849778 ENST00000356708.7 10 1163 MSTRG.94 ATP5C1 637.326477 989.953857 +535 chr10 + 7830110 7849778 ENST00000493053.1 9 1110 MSTRG.94 ATP5C1 31.750629 49.317986 +536 chr10 + 7830122 7838551 ENST00000462760.1 2 573 MSTRG.94 ATP5C1 3.777090 5.866922 +537 chr10 + 7830138 7839009 ENST00000460362.1 3 565 MSTRG.94 ATP5C1 1.167353 1.813240 +538 chr10 + 7830140 7844838 ENST00000541227.1 7 907 MSTRG.94 ATP5C1 5.337528 8.290738 +539 chr10 + 7830140 7849778 ENST00000335698.4 9 1078 MSTRG.94 ATP5C1 2149.534668 3338.854248 +540 chr10 + 7830142 7849778 ENST00000465936.1 4 314 MSTRG.94 ATP5C1 1.012112 1.572105 +541 chr10 + 7830147 7844388 ENST00000460820.2 7 763 MSTRG.94 ATP5C1 0.000000 0.000000 +542 chr10 + 7830173 7841513 ENST00000472202.1 4 782 MSTRG.94 ATP5C1 49.821552 77.387398 +543 chr10 + 7842015 7849778 ENST00000473809.1 6 544 MSTRG.94 ATP5C1 5.222889 8.112670 +544 chr10 + 7844206 7849778 ENST00000480528.1 4 474 MSTRG.94 ATP5C1 3.423152 5.317153 +545 chr10 + 7860467 8058947 ENST00000344293.5 7 5229 MSTRG.95 TAF3 36.603863 56.856472 +546 chr10 + 7860475 8058947 MSTRG.95.2 7 5218 MSTRG.95 . 15.396010 23.914494 +547 chr10 - 7875581 7875920 ENST00000440219.1 1 340 MSTRG.96 RP11-401E9.3 1.394118 2.165472 +548 chr10 - 8092413 8095447 ENST00000355358.1 2 2214 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +549 chr10 - 8092439 8094458 ENST00000420815.1 3 650 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +550 chr10 - 8092439 8094458 ENST00000438755.1 3 675 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +551 chr10 + 8093504 8095047 ENST00000418270.1 3 402 ENSG00000232638.1 RP11-379F12.4 0.000000 0.000000 +552 chr10 - 8094205 8095219 ENST00000417359.1 2 565 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +553 chr10 - 8094206 8095412 ENST00000458727.1 2 820 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +554 chr10 + 8095567 8097859 ENST00000481743.1 2 785 MSTRG.97 GATA3 0.000000 0.000000 +555 chr10 + 8095567 8117161 MSTRG.97.1 6 3054 MSTRG.97 . 1.391568 2.161511 +556 chr10 + 8095593 8117161 MSTRG.97.3 6 3025 MSTRG.97 . 0.000000 0.000000 +557 chr10 + 8096656 8117161 ENST00000379328.3 6 3078 MSTRG.97 GATA3 2.971590 4.615746 +558 chr10 + 8096769 8117161 ENST00000346208.3 6 2962 MSTRG.97 GATA3 1.576005 2.447995 +559 chr10 + 8100362 8117161 ENST00000461472.1 3 2029 MSTRG.97 GATA3 0.000000 0.000000 +560 chr10 + 8203223 8204155 ENST00000451976.1 1 933 ENSG00000225053.1 PRPF38AP1 0.000000 0.000000 +561 chr10 - 8301294 8302767 ENST00000454056.1 2 365 ENSG00000232170.1 LINC00708 0.000000 0.000000 +562 chr10 - 8301294 8310268 ENST00000428165.1 5 916 ENSG00000232170.1 LINC00708 0.000000 0.000000 +563 chr10 + 8340860 8343630 ENST00000413941.1 2 901 ENSG00000226861.1 RP5-1119O21.2 0.000000 0.000000 +564 chr10 + 8442823 8503826 ENST00000413286.1 4 430 ENSG00000226990.1 RP11-543F8.2 0.000000 0.000000 +565 chr10 + 8514682 8514915 ENST00000603398.1 1 234 ENSG00000271251.1 RP11-543F8.3 0.000000 0.000000 +566 chr10 - 8555650 8557069 ENST00000451609.1 1 1420 ENSG00000213771.3 KRT8P37 0.000000 0.000000 +567 chr10 + 8661896 8662571 ENST00000425516.1 1 676 ENSG00000236420.1 CHCHD3P1 0.000000 0.000000 +568 chr10 - 8698679 8698794 ENST00000391203.1 1 116 ENSG00000212505.1 RNA5SP299 0.000000 0.000000 +569 chr10 + 8765973 8766251 ENST00000605632.1 1 279 ENSG00000270234.1 RP11-575N15.1 0.000000 0.000000 +570 chr10 + 8939952 8956559 ENST00000447297.1 4 366 ENSG00000234752.1 RP11-428L9.1 0.000000 0.000000 +571 chr10 + 9012088 9015431 ENST00000456526.1 2 677 ENSG00000223808.1 RP11-428L9.2 0.000000 0.000000 +572 chr10 + 9317796 9329020 ENST00000458168.1 2 494 ENSG00000230014.1 LINC00709 0.000000 0.000000 +573 chr10 - 9763926 9766379 ENST00000450068.1 1 2454 ENSG00000235838.1 HSP90AB7P 0.000000 0.000000 +574 chr10 - 9800746 9801200 ENST00000419836.1 2 344 ENSG00000228636.1 RP5-1051H14.2 0.000000 0.000000 +575 chr10 + 10100685 10105465 ENST00000429539.1 4 575 ENSG00000224788.1 RP5-933E2.1 0.000000 0.000000 +576 chr10 + 10216193 10216528 ENST00000535261.1 1 336 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +577 chr10 + 10216193 10216540 ENST00000439303.1 1 348 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +578 chr10 + 10274574 10274675 ENST00000363979.1 1 102 ENSG00000200849.1 Y_RNA 0.000000 0.000000 +579 chr10 - 10299132 10299429 ENST00000606426.1 1 298 ENSG00000272436.1 CUX2P1 0.000000 0.000000 +580 chr10 - 10407143 10408450 ENST00000455871.1 2 335 ENSG00000234306.1 RP11-271F18.1 0.000000 0.000000 +581 chr10 - 10461501 10504312 ENST00000602311.1 4 505 ENSG00000270111.1 RP11-271F18.4 0.000000 0.000000 +582 chr10 - 10818186 10818624 ENST00000448495.1 1 439 ENSG00000228997.1 RP1-186E20.1 0.000000 0.000000 +583 chr10 - 10826400 10836959 ENST00000415590.2 4 656 MSTRG.98 SFTA1P 0.000000 0.000000 +584 chr10 - 10826400 10836959 ENST00000602763.1 4 636 MSTRG.98 SFTA1P 0.000000 0.000000 +585 chr10 - 10826401 10836959 ENST00000434919.2 3 481 MSTRG.98 SFTA1P 0.000000 0.000000 +586 chr10 - 10826402 10836959 ENST00000446372.2 4 775 MSTRG.98 SFTA1P 0.000000 0.000000 +587 chr10 - 10826413 10836959 MSTRG.98.5 4 784 MSTRG.98 . 0.000000 0.000000 +588 chr10 - 10969021 10988765 ENST00000600516.1 6 659 ENSG00000229240.3 LINC00710 0.000000 0.000000 +589 chr10 - 10976487 10994058 ENST00000428520.2 6 1460 ENSG00000229240.3 LINC00710 0.000000 0.000000 +590 chr10 - 10976903 10978626 ENST00000441855.1 2 514 ENSG00000229240.3 LINC00710 0.000000 0.000000 +591 chr10 - 10988010 10994143 ENST00000596092.1 5 1025 ENSG00000229240.3 LINC00710 0.000000 0.000000 +592 chr10 - 10988011 10994197 ENST00000601050.2 6 994 ENSG00000229240.3 LINC00710 0.000000 0.000000 +593 chr10 - 10988821 10994058 ENST00000450174.2 3 873 ENSG00000229240.3 LINC00710 0.000000 0.000000 +594 chr10 - 10989127 10994129 ENST00000598573.1 2 666 ENSG00000229240.3 LINC00710 0.000000 0.000000 +595 chr10 + 11002114 11012779 ENST00000420825.1 3 537 ENSG00000231496.1 RP1-251M9.2 0.000000 0.000000 +596 chr10 + 11047259 11378666 ENST00000379261.4 14 9233 ENSG00000048740.13 CELF2 0.000000 0.000000 +597 chr10 + 11047351 11373245 ENST00000416382.2 14 2398 ENSG00000048740.13 CELF2 0.000000 0.000000 +598 chr10 - 11052127 11053082 ENST00000437825.1 2 244 ENSG00000228027.1 RP1-251M9.3 0.000000 0.000000 +599 chr10 + 11059893 11378666 ENST00000450189.1 15 7982 ENSG00000048740.13 CELF2 0.000000 0.000000 +600 chr10 + 11060053 11373245 ENST00000542579.1 14 2437 ENSG00000048740.13 CELF2 0.000000 0.000000 +601 chr10 + 11060106 11373245 ENST00000399850.3 14 2384 ENSG00000048740.13 CELF2 0.000000 0.000000 +602 chr10 + 11060106 11373245 ENST00000417956.2 14 2378 ENSG00000048740.13 CELF2 0.000000 0.000000 +603 chr10 + 11072297 11072831 ENST00000428853.2 2 433 ENSG00000229206.2 RP11-397O4.1 0.000000 0.000000 +604 chr10 - 11117094 11140436 ENST00000432370.2 4 853 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +605 chr10 - 11139277 11140123 ENST00000420634.1 2 144 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +606 chr10 + 11206993 11376357 ENST00000354440.2 13 7121 ENSG00000048740.13 CELF2 0.000000 0.000000 +607 chr10 + 11206993 11378666 ENST00000427450.1 15 8036 ENSG00000048740.13 CELF2 0.000000 0.000000 +608 chr10 + 11206993 11378674 ENST00000315874.4 14 8080 ENSG00000048740.13 CELF2 0.000000 0.000000 +609 chr10 + 11207103 11372602 ENST00000608830.1 14 1892 ENSG00000048740.13 CELF2 0.000000 0.000000 +610 chr10 + 11207447 11371252 ENST00000609870.1 10 1549 ENSG00000048740.13 CELF2 0.000000 0.000000 +611 chr10 + 11207447 11373240 ENST00000609692.1 12 2210 ENSG00000048740.13 CELF2 0.000000 0.000000 +612 chr10 + 11207449 11371242 ENST00000354897.3 13 1754 ENSG00000048740.13 CELF2 0.000000 0.000000 +613 chr10 + 11207491 11371055 ENST00000537122.1 11 1406 ENSG00000048740.13 CELF2 0.000000 0.000000 +614 chr10 - 11210885 11213339 ENST00000417273.1 2 430 ENSG00000230322.1 RP3-323N1.2 0.000000 0.000000 +615 chr10 - 11358797 11361847 ENST00000379256.3 2 2468 ENSG00000181800.5 CELF2-AS1 0.000000 0.000000 +616 chr10 - 11495945 11653753 ENST00000609104.1 15 11377 MSTRG.99 USP6NL 75.044815 116.566483 +617 chr10 - 11502509 11574274 ENST00000277575.5 14 4512 MSTRG.99 USP6NL 0.000000 0.000000 +618 chr10 - 11502509 11615840 ENST00000379237.2 14 4650 MSTRG.99 USP6NL 2.446048 3.799426 +619 chr10 - 11605186 11615604 ENST00000443016.1 2 2600 MSTRG.99 USP6NL 17.805187 27.656649 +620 chr10 - 11606126 11615840 ENST00000609853.1 2 1748 MSTRG.99 USP6NL 0.000000 0.000000 +621 chr10 - 11606126 11653753 ENST00000606752.1 3 1911 MSTRG.99 USP6NL 38.943390 60.490444 +622 chr10 + 11653304 11654226 ENST00000604634.1 1 923 MSTRG.100 RP11-138I18.1 0.000000 0.000000 +623 chr10 + 11721674 11722513 ENST00000604086.1 1 840 MSTRG.101 RP11-138I18.2 0.000000 0.000000 +624 chr10 + 11784365 11806069 ENST00000379215.4 5 1649 MSTRG.102 ECHDC3 60.756405 94.372414 +625 chr10 + 11784365 11806069 ENST00000496136.1 6 1767 MSTRG.102 ECHDC3 1.692915 2.629591 +626 chr10 + 11784445 11797607 ENST00000420401.1 4 881 MSTRG.102 ECHDC3 4.918987 7.640621 +627 chr10 + 11789274 11806069 ENST00000422887.1 4 1342 MSTRG.102 ECHDC3 3.827616 5.945404 +628 chr10 + 11789449 11800341 ENST00000495787.1 3 3117 MSTRG.102 ECHDC3 15.497599 24.072290 +629 chr10 + 11865338 11908782 ENST00000474155.1 4 735 MSTRG.103 PROSER2 4.978941 7.733747 +630 chr10 + 11865397 11914276 ENST00000277570.5 4 3333 MSTRG.103 PROSER2 40.306328 62.607479 +631 chr10 + 11873682 11908782 ENST00000444604.1 3 612 MSTRG.103 PROSER2 0.000000 0.000000 +632 chr10 - 11886804 11936699 MSTRG.104.1 5 7842 MSTRG.104 . 52.458248 81.482956 +633 chr10 - 11886873 11936699 MSTRG.104.2 7 8043 MSTRG.104 . 19.678728 30.566803 +634 chr10 - 11891612 11936699 ENST00000445498.1 6 3141 MSTRG.104 PROSER2-AS1 8.456241 13.135008 +635 chr10 - 11899288 11916794 ENST00000453242.1 4 475 MSTRG.104 PROSER2-AS1 0.000000 0.000000 +636 chr10 + 11911643 11914276 ENST00000379200.1 1 2634 MSTRG.103 PROSER2 0.000000 0.000000 +637 chr10 - 11962021 12077896 ENST00000356352.2 21 5569 MSTRG.105 UPF2 8.963843 13.923462 +638 chr10 - 11962021 12084833 ENST00000357604.5 22 5193 MSTRG.105 UPF2 69.327858 107.686378 +639 chr10 - 11962022 12085169 ENST00000397053.2 22 5369 MSTRG.105 UPF2 114.663918 178.106491 +640 chr10 + 11965180 11965287 ENST00000516148.1 1 108 MSTRG.106 RNU6-1095P 0.000000 0.000000 +641 chr10 - 12077058 12085169 ENST00000460569.1 2 640 MSTRG.105 UPF2 0.000000 0.000000 +642 chr10 + 12110960 12165505 MSTRG.107.1 16 5286 MSTRG.107 . 55.508087 86.220245 +643 chr10 + 12110971 12165505 ENST00000263035.4 17 5440 MSTRG.107 DHTKD1 153.562180 238.526855 +644 chr10 + 12111023 12133683 ENST00000437298.1 5 974 MSTRG.107 DHTKD1 2.417591 3.755224 +645 chr10 + 12123523 12139995 ENST00000465617.1 4 811 MSTRG.107 DHTKD1 0.000000 0.000000 +646 chr10 + 12131174 12136300 ENST00000415935.1 3 482 MSTRG.107 DHTKD1 0.000000 0.000000 +647 chr10 + 12136259 12155063 ENST00000448829.1 6 822 MSTRG.107 DHTKD1 0.000000 0.000000 +648 chr10 - 12158279 12158378 ENST00000606801.1 1 100 MSTRG.108 U6 0.000000 0.000000 +649 chr10 + 12160778 12162358 ENST00000479283.1 2 318 MSTRG.107 DHTKD1 0.000000 0.000000 +650 chr10 + 12171636 12197404 ENST00000379051.1 7 708 MSTRG.109 SEC61A2 0.000000 0.000000 +651 chr10 + 12171636 12207411 MSTRG.109.1 12 2481 MSTRG.109 . 22.133036 34.379059 +652 chr10 + 12171640 12207411 ENST00000379033.3 11 2470 MSTRG.109 SEC61A2 9.324776 14.484096 +653 chr10 + 12171664 12207411 MSTRG.109.4 11 2358 MSTRG.109 . 49.106998 76.277489 +654 chr10 + 12171665 12200104 ENST00000441368.1 7 833 MSTRG.109 SEC61A2 0.000000 0.000000 +655 chr10 + 12171693 12211960 ENST00000475268.1 13 2183 MSTRG.109 SEC61A2 2.047617 3.180546 +656 chr10 + 12171698 12207411 ENST00000298428.9 12 2478 MSTRG.109 SEC61A2 94.727394 147.139267 +657 chr10 + 12171698 12211960 ENST00000495368.1 14 2311 MSTRG.109 SEC61A2 4.681245 7.271338 +658 chr10 + 12171700 12211960 ENST00000304267.8 12 2035 MSTRG.109 SEC61A2 5.444991 8.457659 +659 chr10 + 12171701 12200104 ENST00000472221.1 8 907 MSTRG.109 SEC61A2 3.393448 5.271015 +660 chr10 + 12171726 12207411 ENST00000379020.4 11 2252 MSTRG.109 SEC61A2 2.827660 4.392180 +661 chr10 + 12171732 12197309 ENST00000379017.3 7 2090 MSTRG.109 SEC61A2 26.414865 41.029991 +662 chr10 - 12172759 12172815 ENST00000584402.1 1 57 MSTRG.110 MIR548AK 0.000000 0.000000 +663 chr10 + 12178108 12191766 ENST00000457034.1 3 314 MSTRG.109 SEC61A2 0.000000 0.000000 +664 chr10 + 12185139 12200104 ENST00000418772.1 4 496 MSTRG.109 SEC61A2 0.000000 0.000000 +665 chr10 + 12187662 12187765 ENST00000458754.1 1 104 MSTRG.111 snoU13 0.000000 0.000000 +666 chr10 + 12191855 12207411 ENST00000419021.1 5 1643 MSTRG.109 SEC61A2 0.000000 0.000000 +667 chr10 + 12199018 12200284 ENST00000466451.1 2 427 MSTRG.109 SEC61A2 2.932923 4.555685 +668 chr10 - 12207324 12238143 ENST00000491614.1 10 3453 MSTRG.112 NUDT5 347.765411 540.181091 +669 chr10 - 12209575 12238143 ENST00000378937.3 11 1241 MSTRG.112 NUDT5 18.467037 28.684694 +670 chr10 - 12209576 12238143 ENST00000537776.1 10 1201 MSTRG.112 NUDT5 5.609266 8.712826 +671 chr10 - 12209671 12238143 ENST00000378952.3 11 1201 MSTRG.112 NUDT5 19.890188 30.895262 +672 chr10 - 12209737 12221131 ENST00000476462.1 6 622 MSTRG.112 NUDT5 3.227206 5.012792 +673 chr10 - 12211721 12238143 ENST00000378940.3 10 1401 MSTRG.112 NUDT5 108.101677 167.913422 +674 chr10 - 12212231 12238143 ENST00000378927.3 8 1580 MSTRG.112 NUDT5 115.968719 180.133240 +675 chr10 - 12214489 12215812 ENST00000498825.1 2 473 MSTRG.112 NUDT5 10.519217 16.339411 +676 chr10 - 12219842 12238143 ENST00000444732.1 5 709 MSTRG.112 NUDT5 1.622342 2.519970 +677 chr10 + 12237964 12272995 ENST00000429258.2 8 664 MSTRG.113 CDC123 57.573883 89.429031 +678 chr10 + 12237965 12292588 ENST00000281141.4 13 1543 MSTRG.113 CDC123 1093.028564 1697.792114 +679 chr10 + 12238129 12291717 ENST00000455773.3 11 971 MSTRG.113 CDC123 322.672729 501.204834 +680 chr10 + 12238195 12240875 ENST00000467016.1 2 296 MSTRG.113 CDC123 0.000000 0.000000 +681 chr10 + 12238222 12292588 ENST00000378900.2 12 1163 MSTRG.113 CDC123 20.156637 31.309135 +682 chr10 + 12238231 12279265 ENST00000442050.1 8 606 MSTRG.113 CDC123 1.934297 3.004527 +683 chr10 + 12238231 12292588 MSTRG.113.6 11 1052 MSTRG.113 . 22.612463 35.123749 +684 chr10 + 12259413 12292588 ENST00000498747.1 9 950 MSTRG.113 CDC123 2.107458 3.273497 +685 chr10 + 12272947 12292588 ENST00000440613.1 6 685 MSTRG.113 CDC123 5.478215 8.509266 +686 chr10 - 12286750 12289107 ENST00000598961.1 2 1827 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +687 chr10 - 12287627 12289844 ENST00000421657.1 2 1914 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +688 chr10 + 12288053 12292588 ENST00000497963.1 2 1233 MSTRG.113 CDC123 42.134987 65.447922 +689 chr10 + 12303670 12303926 ENST00000582360.1 1 257 ENSG00000265824.1 RN7SL232P 0.000000 0.000000 +690 chr10 - 12370135 12370388 ENST00000583190.1 1 254 ENSG00000264036.1 RN7SL198P 0.000000 0.000000 +691 chr10 + 12391481 12877545 ENST00000378847.3 11 8154 MSTRG.115 CAMK1D 50.342953 78.197289 +692 chr10 + 12391481 12877545 MSTRG.115.1 12 8134 MSTRG.115 . 39.084591 60.709763 +693 chr10 + 12391651 12708948 ENST00000487696.1 2 473 MSTRG.115 CAMK1D 0.000000 0.000000 +694 chr10 + 12391732 12869446 ENST00000378845.1 10 2882 MSTRG.115 CAMK1D 15.657605 24.320827 +695 chr10 + 12391732 12877545 MSTRG.115.4 11 7907 MSTRG.115 . 2.311834 3.590953 +696 chr10 + 12391758 12823236 MSTRG.115.7 6 1421 MSTRG.115 . 2.064908 3.207404 +697 chr10 + 12391758 12877545 MSTRG.115.6 12 7853 MSTRG.115 . 9.729329 15.112485 +698 chr10 + 12457927 12457999 ENST00000516629.1 1 73 MSTRG.116 SNORD45 0.000000 0.000000 +699 chr10 + 12498482 12498630 ENST00000516309.1 1 149 MSTRG.117 RNU6ATAC39P 0.000000 0.000000 +700 chr10 + 12580266 12869446 MSTRG.115.8 10 2774 MSTRG.115 . 0.000000 0.000000 +701 chr10 + 12620752 12620822 ENST00000582492.1 1 71 MSTRG.118 MIR4480 0.000000 0.000000 +702 chr10 - 12767253 12767352 ENST00000408404.1 1 100 MSTRG.119 MIR548Q 0.000000 0.000000 +703 chr10 - 12938627 13043697 ENST00000378825.3 3 2729 MSTRG.120 CCDC3 22.815826 35.439632 +704 chr10 - 12938627 13141811 ENST00000378839.1 7 3339 MSTRG.120 CCDC3 0.000000 0.000000 +705 chr10 - 12966679 12966785 ENST00000391197.1 1 107 MSTRG.121 RNA5SP300 0.000000 0.000000 +706 chr10 - 13099902 13100676 ENST00000441148.1 1 775 MSTRG.122 RPL5P25 2.860262 4.442821 +707 chr10 - 13103634 13141811 MSTRG.120.3 4 895 MSTRG.120 . 0.000000 0.000000 +708 chr10 - 13140536 13141811 MSTRG.120.4 3 511 MSTRG.120 . 0.000000 0.000000 +709 chr10 + 13141449 13180375 ENST00000263036.5 15 3916 MSTRG.123 OPTN 1.158289 1.799160 +710 chr10 + 13141603 13180375 ENST00000378764.2 15 3744 MSTRG.123 OPTN 1.240277 1.926512 +711 chr10 + 13142069 13180375 MSTRG.123.3 15 3622 MSTRG.123 . 13.916950 21.617083 +712 chr10 + 13142070 13180375 MSTRG.123.4 14 3469 MSTRG.123 . 17.216883 26.742840 +713 chr10 + 13142070 13180375 MSTRG.123.5 16 3693 MSTRG.123 . 15.039233 23.360315 +714 chr10 + 13142159 13151662 ENST00000487935.1 3 511 MSTRG.123 OPTN 0.000000 0.000000 +715 chr10 + 13142163 13161040 ENST00000482140.1 5 727 MSTRG.123 OPTN 0.000000 0.000000 +716 chr10 + 13142169 13180375 ENST00000378757.2 14 3388 MSTRG.123 OPTN 16.205362 25.171654 +717 chr10 + 13142173 13158340 ENST00000430081.1 5 861 MSTRG.123 OPTN 3.002195 4.663284 +718 chr10 + 13142173 13180375 ENST00000378748.3 16 3605 MSTRG.123 OPTN 15.910329 24.713381 +719 chr10 + 13142173 13180375 ENST00000378752.3 16 3572 MSTRG.123 OPTN 14.310913 22.229021 +720 chr10 + 13142225 13180375 ENST00000378747.3 15 3484 MSTRG.123 OPTN 5.575230 8.659958 +721 chr10 - 13146574 13146793 ENST00000456003.1 1 220 MSTRG.124 SNRPGP5 5.201953 8.080150 +722 chr10 + 13154487 13158540 ENST00000486862.1 2 423 MSTRG.123 OPTN 0.000000 0.000000 +723 chr10 + 13158268 13165198 ENST00000424614.1 4 664 MSTRG.123 OPTN 9.567974 14.861855 +724 chr10 + 13173319 13180375 ENST00000469025.1 4 2099 MSTRG.123 OPTN 0.000000 0.000000 +725 chr10 - 13181196 13181533 ENST00000442321.1 1 338 ENSG00000234175.1 RP11-730A19.9 0.000000 0.000000 +726 chr10 - 13184185 13184977 ENST00000442900.1 1 793 ENSG00000228330.1 RP11-730A19.5 0.000000 0.000000 +727 chr10 - 13198684 13200136 ENST00000447253.1 1 1453 ENSG00000203414.2 BTBD7P1 0.000000 0.000000 +728 chr10 + 13200491 13201463 MSTRG.125.1 1 973 MSTRG.125 . 1.583762 2.460044 +729 chr10 - 13201477 13201777 ENST00000418616.1 1 301 MSTRG.126 RP11-730A19.7 0.000000 0.000000 +730 chr10 + 13203554 13253104 ENST00000378714.3 20 4547 MSTRG.127 MCM10 192.534546 299.062286 +731 chr10 + 13203579 13214480 ENST00000479669.1 3 475 MSTRG.127 MCM10 0.000000 0.000000 +732 chr10 + 13203579 13253104 ENST00000484800.2 20 4525 MSTRG.127 MCM10 204.507599 317.659943 +733 chr10 + 13206128 13253104 ENST00000378694.1 18 4587 MSTRG.127 MCM10 3.233404 5.022419 +734 chr10 + 13234491 13237580 ENST00000459751.1 2 618 MSTRG.127 MCM10 1.521572 2.363445 +735 chr10 + 13237086 13243872 ENST00000481292.1 4 900 MSTRG.127 MCM10 4.293491 6.669044 +736 chr10 + 13240763 13246526 ENST00000485659.1 3 467 MSTRG.127 MCM10 3.967343 6.162441 +737 chr10 + 13259269 13259375 ENST00000606623.1 1 107 MSTRG.128 RNU6-6P 167.257004 259.798889 +738 chr10 - 13263767 13276331 ENST00000378681.3 5 826 ENSG00000165623.5 UCMA 0.000000 0.000000 +739 chr10 - 13263767 13276334 ENST00000463405.2 4 763 ENSG00000165623.5 UCMA 0.000000 0.000000 +740 chr10 - 13319796 13341763 ENST00000396913.2 8 1732 MSTRG.129 PHYH 1.127750 1.751725 +741 chr10 - 13319800 13342101 ENST00000263038.4 9 1577 MSTRG.129 PHYH 131.531265 204.306412 +742 chr10 - 13319843 13344412 ENST00000396920.3 9 1829 MSTRG.129 PHYH 1.932654 3.001975 +743 chr10 - 13325690 13341763 ENST00000453759.2 7 1097 MSTRG.129 PHYH 0.000000 0.000000 +744 chr10 - 13330412 13342101 ENST00000479604.1 6 691 MSTRG.129 PHYH 0.000000 0.000000 +745 chr10 - 13333461 13336987 ENST00000464049.1 2 1012 MSTRG.129 PHYH 3.518328 5.464990 +746 chr10 - 13337228 13342101 ENST00000463730.1 3 572 MSTRG.129 PHYH 0.000000 0.000000 +747 chr10 - 13350145 13350447 ENST00000429930.1 1 303 ENSG00000226209.1 AL138764.1 0.000000 0.000000 +748 chr10 - 13359424 13389358 MSTRG.130.1 9 3057 MSTRG.130 . 91.912033 142.766190 +749 chr10 - 13359424 13390297 ENST00000327347.5 9 3273 MSTRG.130 SEPHS1 488.784729 759.225220 +750 chr10 - 13360080 13390297 ENST00000378614.4 8 2404 MSTRG.130 SEPHS1 2.587419 4.019016 +751 chr10 - 13360083 13390297 ENST00000545675.1 10 2706 MSTRG.130 SEPHS1 2.620782 4.070838 +752 chr10 - 13360590 13390297 ENST00000537130.1 8 1836 MSTRG.130 SEPHS1 15.749570 24.463675 +753 chr10 - 13375877 13389358 ENST00000413411.1 5 660 MSTRG.130 SEPHS1 4.409873 6.849819 +754 chr10 - 13375901 13382790 ENST00000425947.1 4 383 MSTRG.130 SEPHS1 9.584371 14.887322 +755 chr10 - 13380716 13387460 ENST00000494329.1 2 796 MSTRG.130 SEPHS1 14.955763 23.230661 +756 chr10 + 13390362 13390978 MSTRG.131.1 1 617 MSTRG.131 . 5.197731 8.073591 +757 chr10 + 13457202 13465133 ENST00000448272.1 2 454 ENSG00000233256.1 RP11-445K13.2 0.000000 0.000000 +758 chr10 - 13480484 13502083 ENST00000486542.1 4 1764 MSTRG.132 BEND7 0.000000 0.000000 +759 chr10 - 13480501 13570974 ENST00000396900.2 9 2672 MSTRG.132 BEND7 0.000000 0.000000 +760 chr10 - 13480637 13544976 ENST00000341083.3 9 2239 MSTRG.132 BEND7 0.000000 0.000000 +761 chr10 - 13483084 13570974 MSTRG.132.4 9 4034 MSTRG.132 . 5.401065 8.389429 +762 chr10 - 13483084 13570974 MSTRG.132.5 9 7172 MSTRG.132 . 3.097386 4.811144 +763 chr10 - 13483084 13570974 MSTRG.132.6 8 7895 MSTRG.132 . 1.951133 3.030679 +764 chr10 - 13483084 13570974 MSTRG.132.7 9 4335 MSTRG.132 . 2.229560 3.463156 +765 chr10 - 13483087 13570974 MSTRG.132.10 6 7401 MSTRG.132 . 0.000000 0.000000 +766 chr10 - 13483087 13570974 MSTRG.132.11 9 7133 MSTRG.132 . 2.235501 3.472385 +767 chr10 - 13483087 13570974 MSTRG.132.12 10 4091 MSTRG.132 . 1.371251 2.129953 +768 chr10 - 13483087 13570974 MSTRG.132.13 10 4049 MSTRG.132 . 1.094342 1.699832 +769 chr10 - 13483087 13570974 MSTRG.132.8 9 4034 MSTRG.132 . 4.442237 6.900089 +770 chr10 - 13483087 13570974 MSTRG.132.9 8 7853 MSTRG.132 . 1.838681 2.856008 +771 chr10 - 13483088 13523120 ENST00000440282.1 3 6571 MSTRG.132 BEND7 3.612472 5.611223 +772 chr10 - 13483088 13570974 MSTRG.132.14 9 4334 MSTRG.132 . 1.815133 2.819431 +773 chr10 - 13483090 13570974 ENST00000396898.2 9 2375 MSTRG.132 BEND7 1.857335 2.884983 +774 chr10 - 13483113 13570974 MSTRG.132.17 9 2156 MSTRG.132 . 0.000000 0.000000 +775 chr10 - 13483113 13570974 MSTRG.132.18 9 7146 MSTRG.132 . 1.542914 2.396595 +776 chr10 - 13483113 13570974 MSTRG.132.19 7 5631 MSTRG.132 . 0.000000 0.000000 +777 chr10 - 13483114 13570974 MSTRG.132.20 9 2116 MSTRG.132 . 0.000000 0.000000 +778 chr10 - 13483355 13544976 ENST00000378605.3 8 1640 MSTRG.132 BEND7 0.000000 0.000000 +779 chr10 - 13483355 13570974 MSTRG.132.21 10 3820 MSTRG.132 . 1.524234 2.367580 +780 chr10 - 13483399 13570974 MSTRG.132.23 9 6818 MSTRG.132 . 3.253066 5.052960 +781 chr10 - 13484980 13494658 ENST00000480703.1 3 598 MSTRG.132 BEND7 1.464756 2.275193 +782 chr10 - 13484980 13570974 MSTRG.132.24 10 4355 MSTRG.132 . 0.000000 0.000000 +783 chr10 - 13484980 13570974 MSTRG.132.25 9 2400 MSTRG.132 . 0.000000 0.000000 +784 chr10 - 13487290 13494658 ENST00000463303.1 3 442 MSTRG.132 BEND7 0.000000 0.000000 +785 chr10 - 13487316 13523120 ENST00000469555.1 5 695 MSTRG.132 BEND7 0.000000 0.000000 +786 chr10 - 13534692 13538929 ENST00000492675.1 2 349 MSTRG.132 BEND7 0.000000 0.000000 +787 chr10 - 13534692 13570974 MSTRG.132.29 5 1226 MSTRG.132 . 0.000000 0.000000 +788 chr10 - 13538788 13570974 ENST00000466271.1 4 990 MSTRG.132 BEND7 0.000000 0.000000 +789 chr10 - 13553206 13553313 ENST00000365638.1 1 108 MSTRG.133 Y_RNA 0.000000 0.000000 +790 chr10 + 13570516 13572262 ENST00000438431.1 2 380 MSTRG.134 RP11-214D15.2 0.000000 0.000000 +791 chr10 + 13628927 13673142 ENST00000378572.3 10 1991 MSTRG.135 PRPF18 57.647964 89.544098 +792 chr10 + 13628927 13697929 MSTRG.135.1 15 12325 MSTRG.135 . 41.431854 64.355751 +793 chr10 + 13628939 13656086 ENST00000417658.1 10 1088 MSTRG.135 PRPF18 1.437394 2.232692 +794 chr10 + 13628968 13653683 ENST00000320054.4 7 819 MSTRG.135 PRPF18 13.950950 21.669893 +795 chr10 + 13628968 13697929 MSTRG.135.4 15 10144 MSTRG.135 . 0.000000 0.000000 +796 chr10 - 13633460 13634323 ENST00000445338.1 1 864 MSTRG.136 RP11-295P9.2 1.525790 2.369997 +797 chr10 + 13652047 13697929 ENST00000601460.1 7 1204 MSTRG.135 RP11-295P9.3 1.081871 1.680461 +798 chr10 + 13658531 13687074 ENST00000595538.1 5 734 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +799 chr10 + 13672284 13687074 ENST00000596044.1 5 824 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +800 chr10 + 13673143 13687074 ENST00000601075.1 4 923 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +801 chr10 + 13673288 13697929 ENST00000597920.1 4 1893 MSTRG.135 RP11-295P9.3 1.229263 1.909404 +802 chr10 + 13673333 13690230 ENST00000440878.1 3 397 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +803 chr10 + 13673722 13696427 ENST00000601758.1 5 744 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +804 chr10 + 13673768 13697929 ENST00000599639.1 4 1099 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +805 chr10 + 13674680 13697929 ENST00000596499.1 6 1159 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +806 chr10 + 13678997 13687074 ENST00000599378.1 4 603 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +807 chr10 + 13680646 13686563 ENST00000610032.1 1 5918 MSTRG.135 RP11-295P9.3 3.842233 5.968108 +808 chr10 + 13680825 13688669 ENST00000437446.1 2 1852 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +809 chr10 + 13685644 13695446 ENST00000600249.1 6 773 MSTRG.135 RP11-295P9.3 1.213050 1.884220 +810 chr10 - 13685706 13900912 ENST00000358621.4 23 6407 MSTRG.137 FRMD4A 6.679437 10.375113 +811 chr10 - 13685706 13933775 MSTRG.137.2 24 6559 MSTRG.137 . 63.616562 98.815071 +812 chr10 - 13685706 14050897 MSTRG.137.1 23 7174 MSTRG.137 . 0.000000 0.000000 +813 chr10 - 13685712 14372883 ENST00000357447.2 25 6815 MSTRG.137 FRMD4A 0.000000 0.000000 +814 chr10 + 13686576 13690773 ENST00000600501.1 3 793 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +815 chr10 + 13686791 13697929 ENST00000596235.1 6 1237 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +816 chr10 - 13688056 14050897 MSTRG.137.5 24 4860 MSTRG.137 . 0.000000 0.000000 +817 chr10 - 13688272 13696526 ENST00000475325.1 2 875 MSTRG.137 FRMD4A 1.835232 2.850651 +818 chr10 - 13688334 13699173 ENST00000495956.1 3 1337 MSTRG.137 FRMD4A 10.065430 15.634547 +819 chr10 + 13688670 13697929 ENST00000419851.2 4 1380 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +820 chr10 + 13688844 13697929 ENST00000594575.1 5 1355 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +821 chr10 + 13690184 13710595 ENST00000593351.1 3 1120 MSTRG.135 RP11-295P9.3 2.553143 3.965776 +822 chr10 + 13691264 13697929 ENST00000600511.1 4 949 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +823 chr10 + 13691284 13697929 ENST00000593358.1 4 760 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +824 chr10 - 13693905 14372182 ENST00000378503.1 23 3201 MSTRG.137 FRMD4A 0.000000 0.000000 +825 chr10 + 13694052 13697929 ENST00000598625.1 3 1065 MSTRG.135 RP11-295P9.3 1.502285 2.333487 +826 chr10 + 13695825 13697929 ENST00000430721.1 2 1155 MSTRG.135 RP11-295P9.3 2.640709 4.101791 +827 chr10 - 13699174 13750043 MSTRG.137.11 12 2390 MSTRG.137 . 6.036280 9.376103 +828 chr10 - 13699174 13750043 MSTRG.137.13 12 2460 MSTRG.137 . 9.662778 15.009112 +829 chr10 - 13699174 13750043 MSTRG.137.14 10 2565 MSTRG.137 . 6.175931 9.593021 +830 chr10 - 13699174 13750043 MSTRG.137.15 9 2478 MSTRG.137 . 6.420978 9.973652 +831 chr10 - 13699174 13750043 MSTRG.137.17 11 3109 MSTRG.137 . 3.227232 5.012832 +832 chr10 - 13699174 13750043 MSTRG.137.9 11 2424 MSTRG.137 . 7.356941 11.427475 +833 chr10 - 13699174 13933775 MSTRG.137.10 22 2558 MSTRG.137 . 15.044810 23.368979 +834 chr10 - 13699174 14014369 MSTRG.137.16 21 3033 MSTRG.137 . 0.000000 0.000000 +835 chr10 - 13699174 14050897 MSTRG.137.12 23 3789 MSTRG.137 . 0.000000 0.000000 +836 chr10 - 13708224 14014369 ENST00000264546.6 17 2145 MSTRG.137 FRMD4A 0.000000 0.000000 +837 chr10 + 13717646 13717990 ENST00000609756.1 1 345 MSTRG.138 RP11-295P9.12 0.000000 0.000000 +838 chr10 + 13724521 13726874 ENST00000600850.1 2 1978 MSTRG.139 RP11-295P9.8 0.000000 0.000000 +839 chr10 - 13734169 13750043 ENST00000492155.1 3 3017 MSTRG.137 FRMD4A 3.466895 5.385099 +840 chr10 - 13735703 14050897 ENST00000342409.2 14 2106 MSTRG.137 FRMD4A 0.000000 0.000000 +841 chr10 - 13735983 13750043 ENST00000477221.1 4 971 MSTRG.137 FRMD4A 0.000000 0.000000 +842 chr10 + 13746978 13747072 ENST00000410303.1 1 95 MSTRG.140 AL157392.1 0.000000 0.000000 +843 chr10 + 13752415 13754054 ENST00000412388.1 2 373 MSTRG.141 RP11-295P9.6 0.000000 0.000000 +844 chr10 + 13769796 13769916 ENST00000362537.1 1 121 MSTRG.142 RNA5SP301 0.000000 0.000000 +845 chr10 + 13771383 13798200 ENST00000449462.1 3 474 MSTRG.143 RP11-353M9.1 0.000000 0.000000 +846 chr10 + 13912797 13913175 ENST00000475013.1 1 379 MSTRG.144 RP11-308K19.2 0.000000 0.000000 +847 chr10 + 14033815 14049525 ENST00000446193.1 3 570 MSTRG.145 RP11-142M10.2 0.000000 0.000000 +848 chr10 + 14053432 14063601 MSTRG.146.1 2 1693 MSTRG.146 . 0.000000 0.000000 +849 chr10 + 14116283 14129734 ENST00000451617.1 3 920 MSTRG.147 RP11-397C18.2 0.000000 0.000000 +850 chr10 + 14116283 14131638 MSTRG.147.1 5 1432 MSTRG.147 . 0.000000 0.000000 +851 chr10 + 14116702 14120540 MSTRG.147.4 2 235 MSTRG.147 . 0.000000 0.000000 +852 chr10 + 14116702 14128905 MSTRG.147.3 3 441 MSTRG.147 . 0.000000 0.000000 +853 chr10 - 14124946 14504141 ENST00000493380.1 4 1197 MSTRG.137 FRMD4A 0.000000 0.000000 +854 chr10 - 14368174 14504141 ENST00000475141.2 4 1233 MSTRG.137 FRMD4A 0.000000 0.000000 +855 chr10 + 14417237 14432137 MSTRG.148.1 3 3915 MSTRG.148 . 0.000000 0.000000 +856 chr10 + 14417459 14432137 MSTRG.148.2 4 3009 MSTRG.148 . 0.000000 0.000000 +857 chr10 + 14418734 14432137 MSTRG.148.3 3 1684 MSTRG.148 . 1.511611 2.347973 +858 chr10 + 14418887 14432137 MSTRG.148.4 4 2315 MSTRG.148 . 0.000000 0.000000 +859 chr10 + 14418887 14456385 MSTRG.148.5 3 2567 MSTRG.148 . 0.000000 0.000000 +860 chr10 - 14425199 14425276 ENST00000584305.1 1 78 MSTRG.149 MIR4293 0.000000 0.000000 +861 chr10 + 14460801 14481374 MSTRG.150.1 3 861 MSTRG.150 . 0.000000 0.000000 +862 chr10 + 14478575 14478660 ENST00000408444.1 1 86 MSTRG.151 MIR1265 0.000000 0.000000 +863 chr10 - 14560556 14590669 ENST00000378470.1 4 3316 MSTRG.152 FAM107B 44.649792 69.354149 +864 chr10 - 14560556 14598413 MSTRG.152.2 5 3204 MSTRG.152 . 77.973061 121.114906 +865 chr10 - 14560556 14646417 MSTRG.152.1 6 3404 MSTRG.152 . 64.348457 99.951920 +866 chr10 - 14560556 14646417 MSTRG.152.3 6 3387 MSTRG.152 . 0.000000 0.000000 +867 chr10 - 14560556 14646417 MSTRG.152.4 5 3338 MSTRG.152 . 0.000000 0.000000 +868 chr10 - 14560556 14646417 MSTRG.152.5 6 5580 MSTRG.152 . 108.235458 168.121231 +869 chr10 - 14560559 14816896 ENST00000181796.2 5 3785 MSTRG.152 FAM107B 0.000000 0.000000 +870 chr10 - 14561158 14646417 ENST00000468747.1 4 2662 MSTRG.152 FAM107B 15.351529 23.845402 +871 chr10 - 14561512 14646417 ENST00000378467.4 5 2374 MSTRG.152 FAM107B 2.679147 4.161497 +872 chr10 - 14561901 14816896 ENST00000487335.1 6 2509 MSTRG.152 FAM107B 0.000000 0.000000 +873 chr10 - 14562794 14614188 ENST00000378465.3 4 1113 MSTRG.152 FAM107B 0.000000 0.000000 +874 chr10 - 14562850 14614188 ENST00000378458.2 5 1284 MSTRG.152 FAM107B 0.000000 0.000000 +875 chr10 - 14563016 14598360 ENST00000478076.1 4 971 MSTRG.152 FAM107B 0.000000 0.000000 +876 chr10 - 14563072 14614188 ENST00000378462.1 4 768 MSTRG.152 FAM107B 0.000000 0.000000 +877 chr10 - 14563088 14590669 ENST00000481209.1 5 887 MSTRG.152 FAM107B 0.000000 0.000000 +878 chr10 - 14563095 14564224 ENST00000475858.1 2 568 MSTRG.152 FAM107B 0.000000 0.000000 +879 chr10 - 14563136 14596228 ENST00000496330.1 5 697 MSTRG.152 FAM107B 0.000000 0.000000 +880 chr10 - 14563136 14598413 ENST00000492700.1 4 558 MSTRG.152 FAM107B 0.000000 0.000000 +881 chr10 - 14563157 14614338 ENST00000479731.1 4 595 MSTRG.152 FAM107B 0.000000 0.000000 +882 chr10 - 14563193 14614338 ENST00000468492.1 5 625 MSTRG.152 FAM107B 0.000000 0.000000 +883 chr10 - 14563200 14614188 ENST00000452706.2 4 868 MSTRG.152 FAM107B 0.000000 0.000000 +884 chr10 - 14563206 14574709 ENST00000489100.1 4 559 MSTRG.152 FAM107B 0.000000 0.000000 +885 chr10 - 14563211 14598014 ENST00000494865.1 5 691 MSTRG.152 FAM107B 0.000000 0.000000 +886 chr10 - 14563280 14598360 ENST00000475786.1 5 773 MSTRG.152 FAM107B 0.000000 0.000000 +887 chr10 - 14563868 14614188 ENST00000488576.1 5 711 MSTRG.152 FAM107B 0.000000 0.000000 +888 chr10 - 14563869 14595482 ENST00000474143.1 3 496 MSTRG.152 FAM107B 1.179908 1.832741 +889 chr10 - 14563875 14654551 ENST00000442012.1 4 458 MSTRG.152 FAM107B 0.000000 0.000000 +890 chr10 - 14563893 14614188 ENST00000482277.1 4 642 MSTRG.152 FAM107B 0.000000 0.000000 +891 chr10 - 14563944 14614188 ENST00000472095.1 5 632 MSTRG.152 FAM107B 0.000000 0.000000 +892 chr10 - 14571527 14646417 ENST00000471815.1 3 1022 MSTRG.152 FAM107B 0.000000 0.000000 +893 chr10 - 14571954 14614188 ENST00000464952.1 4 748 MSTRG.152 FAM107B 0.000000 0.000000 +894 chr10 - 14576785 14614188 ENST00000495292.1 3 576 MSTRG.152 FAM107B 0.000000 0.000000 +895 chr10 - 14644456 14646417 ENST00000491458.1 2 573 MSTRG.152 FAM107B 2.299546 3.571866 +896 chr10 + 14694741 14703690 ENST00000443282.1 3 357 MSTRG.153 RP11-7C6.1 0.000000 0.000000 +897 chr10 - 14705394 14705493 ENST00000364896.1 1 100 MSTRG.154 RNA5SP302 0.000000 0.000000 +898 chr10 - 14765170 14766054 ENST00000456871.1 1 885 MSTRG.155 RP11-398C13.2 0.000000 0.000000 +899 chr10 - 14860113 14880071 MSTRG.156.1 5 2600 MSTRG.156 . 2.014839 3.129632 +900 chr10 - 14860273 14880071 MSTRG.156.2 6 2561 MSTRG.156 . 3.246276 5.042413 +901 chr10 - 14860304 14880071 MSTRG.156.3 6 2526 MSTRG.156 . 4.479362 6.957756 +902 chr10 - 14861249 14880574 ENST00000378442.1 6 1492 MSTRG.156 CDNF 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21.318420 +914 chr10 - 14919687 14920685 ENST00000609399.1 1 999 MSTRG.158 RP11-398C13.6 11.026025 17.126631 +915 chr10 + 14920819 14954823 ENST00000378331.5 5 11468 MSTRG.159 SUV39H2 28.656000 44.511127 +916 chr10 + 14920819 14955409 MSTRG.159.1 6 11880 MSTRG.159 . 1.485050 2.306716 +917 chr10 + 14920847 14954823 ENST00000433779.1 6 11087 MSTRG.159 SUV39H2 1.848199 2.870792 +918 chr10 + 14920862 14954823 ENST00000378325.3 6 11031 MSTRG.159 SUV39H2 4.211335 6.541431 +919 chr10 + 14920888 14954823 ENST00000354919.6 6 11545 MSTRG.159 SUV39H2 25.044636 38.901623 +920 chr10 + 14920888 14954823 MSTRG.159.6 6 11586 MSTRG.159 . 9.532336 14.806498 +921 chr10 + 14920888 14955409 MSTRG.159.5 7 11957 MSTRG.159 . 1.782168 2.768227 +922 chr10 + 14920899 14954823 ENST00000313519.5 5 11596 MSTRG.159 SUV39H2 8.050923 12.505432 +923 chr10 + 14920921 14939516 ENST00000420416.1 2 711 MSTRG.159 SUV39H2 1.079445 1.676693 +924 chr10 + 14921123 14954823 MSTRG.159.10 6 11891 MSTRG.159 . 4.928115 7.654799 +925 chr10 + 14921815 14939516 ENST00000412254.1 3 1070 MSTRG.159 SUV39H2 0.000000 0.000000 +926 chr10 + 14923499 14954823 ENST00000358298.6 4 10842 MSTRG.159 SUV39H2 0.000000 0.000000 +927 chr10 - 14939358 14996431 ENST00000378289.4 14 3532 MSTRG.160 DCLRE1C 9.376031 14.563710 +928 chr10 - 14948897 14996431 ENST00000453695.2 14 4011 MSTRG.160 DCLRE1C 19.017210 29.539272 +929 chr10 - 14949878 14996431 ENST00000378246.2 13 2974 MSTRG.160 DCLRE1C 0.000000 0.000000 +930 chr10 - 14950165 14996431 ENST00000357717.2 12 2602 MSTRG.160 DCLRE1C 0.000000 0.000000 +931 chr10 - 14950170 14996431 ENST00000378249.1 12 2630 MSTRG.160 DCLRE1C 0.000000 0.000000 +932 chr10 - 14950170 14996431 ENST00000378254.1 15 2869 MSTRG.160 DCLRE1C 0.000000 0.000000 +933 chr10 - 14950170 14996431 ENST00000378255.1 16 3191 MSTRG.160 DCLRE1C 0.000000 0.000000 +934 chr10 - 14950170 14996431 ENST00000378258.1 15 2823 MSTRG.160 DCLRE1C 1.081082 1.679236 +935 chr10 - 14950170 14996431 ENST00000378278.2 14 2738 MSTRG.160 DCLRE1C 0.000000 0.000000 +936 chr10 - 14950170 14996431 ENST00000396817.2 16 3145 MSTRG.160 DCLRE1C 1.143471 1.776144 +937 chr10 - 14950187 14965674 ENST00000378242.1 3 1933 MSTRG.160 DCLRE1C 0.000000 0.000000 +938 chr10 - 14950187 14996431 MSTRG.160.11 16 2937 MSTRG.160 . 1.018846 1.582565 +939 chr10 - 14950741 14970141 ENST00000492201.1 6 1020 MSTRG.160 DCLRE1C 0.000000 0.000000 +940 chr10 - 14950741 14996431 MSTRG.160.13 15 2307 MSTRG.160 . 1.041896 1.618368 +941 chr10 - 14951169 14953321 ENST00000489845.1 2 294 MSTRG.160 DCLRE1C 0.000000 0.000000 +942 chr10 - 14951169 15059043 MSTRG.160.15 7 780 MSTRG.160 . 1.648419 2.560476 +943 chr10 - 14961795 14970141 ENST00000489161.1 3 253 MSTRG.160 DCLRE1C 0.000000 0.000000 +944 chr10 - 14961795 14996431 MSTRG.160.17 13 1549 MSTRG.160 . 0.000000 0.000000 +945 chr10 - 14970142 14996431 ENST00000418843.1 11 1302 MSTRG.160 DCLRE1C 0.000000 0.000000 +946 chr10 - 14976444 14996431 ENST00000378241.1 10 1247 MSTRG.160 DCLRE1C 0.000000 0.000000 +947 chr10 - 14976722 14996431 ENST00000456122.1 8 1290 MSTRG.160 DCLRE1C 0.000000 0.000000 +948 chr10 + 15001398 15030049 MSTRG.161.1 6 1215 MSTRG.161 . 1.086190 1.687170 +949 chr10 + 15001438 15014850 ENST00000407572.1 3 625 MSTRG.161 MEIG1 0.000000 0.000000 +950 chr10 + 15001438 15014850 ENST00000477770.1 2 458 MSTRG.161 MEIG1 0.000000 0.000000 +951 chr10 + 15001509 15014850 ENST00000496225.2 3 686 MSTRG.161 MEIG1 0.000000 0.000000 +952 chr10 + 15008438 15014850 ENST00000378240.1 2 507 MSTRG.161 MEIG1 0.000000 0.000000 +953 chr10 + 15014554 15030049 ENST00000467536.1 3 548 MSTRG.161 MEIG1 0.000000 0.000000 +954 chr10 - 15028941 15029514 ENST00000431186.2 1 574 MSTRG.162 OR7E110P 0.000000 0.000000 +955 chr10 - 15041049 15042054 ENST00000502808.2 1 1006 MSTRG.163 OR7E26P 0.000000 0.000000 +956 chr10 - 15049860 15050883 ENST00000382617.4 1 1024 MSTRG.164 OR7E115P 0.000000 0.000000 +957 chr10 - 15057071 15130775 ENST00000378211.3 8 997 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +958 chr10 - 15057369 15063862 ENST00000454630.1 5 470 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +959 chr10 + 15074226 15107752 ENST00000428897.1 6 859 MSTRG.165 OLAH 0.000000 0.000000 +960 chr10 + 15074252 15098981 ENST00000413672.1 4 583 MSTRG.165 OLAH 0.000000 0.000000 +961 chr10 + 15080621 15107752 ENST00000429028.1 6 797 MSTRG.165 OLAH 0.000000 0.000000 +962 chr10 + 15085895 15115851 ENST00000378228.3 8 1675 MSTRG.165 OLAH 0.000000 0.000000 +963 chr10 + 15085926 15104083 ENST00000378225.1 4 810 MSTRG.165 OLAH 0.000000 0.000000 +964 chr10 + 15085962 15115851 ENST00000378217.3 9 1767 MSTRG.165 OLAH 0.000000 0.000000 +965 chr10 + 15091722 15110069 ENST00000493912.1 5 491 MSTRG.165 OLAH 0.000000 0.000000 +966 chr10 + 15107537 15115851 ENST00000485251.1 2 982 MSTRG.165 OLAH 0.000000 0.000000 +967 chr10 - 15119522 15130775 ENST00000356189.5 4 1322 MSTRG.160 ACBD7 26.795950 41.621925 +968 chr10 - 15120486 15130715 ENST00000496890.1 4 709 MSTRG.160 ACBD7 0.000000 0.000000 +969 chr10 - 15135262 15135610 ENST00000452090.1 1 349 ENSG00000228312.1 GAPDHP45 0.000000 0.000000 +970 chr10 - 15137384 15139318 ENST00000378207.3 2 1714 MSTRG.166 C10orf111 0.000000 0.000000 +971 chr10 + 15139179 15146256 ENST00000378203.1 3 1302 MSTRG.167 RPP38 45.703239 70.990456 +972 chr10 + 15139214 15148129 ENST00000378201.2 5 833 MSTRG.167 RPP38 0.000000 0.000000 +973 chr10 + 15139236 15181817 ENST00000451677.1 3 323 MSTRG.167 RPP38 0.000000 0.000000 +974 chr10 + 15139330 15146256 ENST00000378202.5 2 1032 MSTRG.167 RPP38 60.140858 93.416290 +975 chr10 + 15139381 15146256 ENST00000378197.4 3 1457 MSTRG.167 RPP38 77.299179 120.068169 +976 chr10 + 15139419 15146256 ENST00000441850.1 2 1300 MSTRG.167 RPP38 18.473053 28.694036 +977 chr10 - 15144583 15151838 ENST00000466201.1 2 1238 MSTRG.168 NMT2 8.713690 13.534902 +978 chr10 - 15147758 15210692 MSTRG.168.2 12 2497 MSTRG.168 . 13.594287 21.115892 +979 chr10 - 15147758 15210692 MSTRG.168.3 13 2540 MSTRG.168 . 16.241875 25.228369 +980 chr10 - 15148372 15161512 ENST00000486786.1 4 803 MSTRG.168 NMT2 2.893242 4.494048 +981 chr10 - 15149865 15210692 ENST00000378165.4 12 2907 MSTRG.168 NMT2 49.608570 77.056572 +982 chr10 - 15150293 15210692 ENST00000378150.1 13 2522 MSTRG.168 NMT2 50.171188 77.930481 +983 chr10 - 15151020 15202124 ENST00000540259.1 12 1832 MSTRG.168 NMT2 0.000000 0.000000 +984 chr10 - 15151098 15210501 ENST00000535341.1 13 1669 MSTRG.168 NMT2 0.000000 0.000000 +985 chr10 - 15174816 15183352 ENST00000478580.1 5 840 MSTRG.168 NMT2 0.000000 0.000000 +986 chr10 - 15196801 15197319 ENST00000415473.1 1 519 MSTRG.169 PPIAP30 0.000000 0.000000 +987 chr10 - 15213035 15213277 ENST00000450788.1 1 243 ENSG00000228181.1 RP11-455B2.9 0.000000 0.000000 +988 chr10 - 15253642 15413061 ENST00000378116.4 8 3955 MSTRG.170 FAM171A1 272.410309 423.132660 +989 chr10 - 15256170 15290814 ENST00000477161.1 3 725 MSTRG.170 FAM171A1 1.191621 1.850935 +990 chr10 + 15279491 15283766 ENST00000433455.1 2 794 MSTRG.171 RP11-25G10.2 0.000000 0.000000 +991 chr10 - 15290638 15413061 ENST00000455654.1 4 605 MSTRG.170 FAM171A1 0.000000 0.000000 +992 chr10 - 15555948 15762124 ENST00000378076.3 30 6755 MSTRG.172 ITGA8 0.000000 0.000000 +993 chr10 - 15638512 15646286 ENST00000477064.1 2 867 MSTRG.172 ITGA8 0.000000 0.000000 +994 chr10 - 15653509 15686220 ENST00000468882.1 4 425 MSTRG.172 ITGA8 0.000000 0.000000 +995 chr10 - 15820169 15860007 ENST00000378036.1 6 2452 MSTRG.173 FAM188A 0.000000 0.000000 +996 chr10 - 15820169 15902519 ENST00000277632.3 15 2381 MSTRG.173 FAM188A 64.425934 100.072266 +997 chr10 - 15820169 15902519 ENST00000477891.1 14 2329 MSTRG.173 FAM188A 68.422905 106.280724 +998 chr10 - 15820853 15824334 ENST00000476912.1 2 469 MSTRG.173 FAM188A 3.208248 4.983345 +999 chr10 - 15820853 15902519 MSTRG.173.4 13 1528 MSTRG.173 . 18.066607 28.062708 +1000 chr10 - 15830827 15879317 ENST00000418767.1 7 986 MSTRG.173 FAM188A 7.481276 11.620604 diff -r 298d81e5e138 -r d3377a16d881 test-data/ASP14_3.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ASP14_3.tabular Wed Jan 14 09:30:42 2026 +0000 @@ -0,0 +1,1001 @@ +t_id chr strand start end t_name num_exons length gene_id gene_name cov FPKM +1 chr10 + 90652 92824 ENST00000416477.1 6 747 ENSG00000237297.1 RP11-631M21.6 0.000000 0.000000 +2 chr10 - 92828 96173 ENST00000447903.2 4 2273 MSTRG.1 TUBB8 4.797099 7.503808 +3 chr10 - 92832 95347 ENST00000309812.4 4 1669 MSTRG.1 TUBB8 0.000000 0.000000 +4 chr10 - 92860 96173 MSTRG.1.3 4 2409 MSTRG.1 . 0.000000 0.000000 +5 chr10 - 93434 95347 ENST00000332708.5 3 958 MSTRG.1 TUBB8 0.000000 0.000000 +6 chr10 - 93518 120103 ENST00000413237.3 5 1968 MSTRG.1 TUBB8 0.000000 0.000000 +7 chr10 - 93645 95347 ENST00000482075.1 3 934 MSTRG.1 TUBB8 0.000000 0.000000 +8 chr10 - 126334 132205 ENST00000423948.1 7 1312 ENSG00000232420.2 IL9RP2 0.000000 0.000000 +9 chr10 + 180359 300577 MSTRG.2.1 15 4363 MSTRG.2 . 29.333263 45.884232 +10 chr10 + 180405 283617 ENST00000439456.1 5 788 MSTRG.2 ZMYND11 0.000000 0.000000 +11 chr10 + 180424 295201 ENST00000381602.4 14 2287 MSTRG.2 ZMYND11 1.587166 2.482707 +12 chr10 + 180424 300577 ENST00000309776.4 15 4404 MSTRG.2 ZMYND11 13.638414 21.333736 +13 chr10 + 180643 295201 ENST00000509513.2 14 2065 MSTRG.2 ZMYND11 19.470909 30.457151 +14 chr10 + 180643 300577 MSTRG.2.5 14 4433 MSTRG.2 . 35.642887 55.753986 +15 chr10 + 180742 300577 ENST00000397959.3 13 3831 MSTRG.2 ZMYND11 16.059483 25.120865 +16 chr10 + 180742 300577 MSTRG.2.7 14 3924 MSTRG.2 . 36.317501 56.809242 +17 chr10 + 181009 300577 ENST00000381591.1 15 4229 MSTRG.2 ZMYND11 52.316956 81.836212 +18 chr10 + 181424 300577 ENST00000381607.4 14 3909 MSTRG.2 ZMYND11 38.898376 60.846348 +19 chr10 + 181424 300577 ENST00000403354.1 13 3831 MSTRG.2 ZMYND11 34.589352 54.106007 +20 chr10 + 181449 300577 ENST00000402736.1 14 3953 MSTRG.2 ZMYND11 51.003510 79.781670 +21 chr10 + 181449 300577 MSTRG.2.12 15 4046 MSTRG.2 . 53.839890 84.218445 +22 chr10 - 200771 200883 ENST00000391029.1 1 113 MSTRG.3 RNA5SP297 0.000000 0.000000 +23 chr10 + 225930 300577 ENST00000602682.1 12 3744 MSTRG.2 ZMYND11 3.528090 5.518775 +24 chr10 + 225933 300577 ENST00000381604.4 15 4091 MSTRG.2 ZMYND11 5.789258 9.055782 +25 chr10 + 225934 283617 ENST00000397955.2 6 673 MSTRG.2 ZMYND11 0.000000 0.000000 +26 chr10 + 225934 300577 ENST00000381584.1 15 4090 MSTRG.2 ZMYND11 46.057907 72.045563 +27 chr10 + 225953 295201 ENST00000558098.2 13 1859 MSTRG.2 ZMYND11 17.975800 28.118443 +28 chr10 + 255833 300577 ENST00000545619.1 11 3616 MSTRG.2 ZMYND11 30.006897 46.937950 +29 chr10 + 255891 300577 ENST00000535374.1 10 3492 MSTRG.2 ZMYND11 25.842836 40.424366 +30 chr10 + 285902 292939 ENST00000488275.1 4 581 MSTRG.2 ZMYND11 2.379018 3.721352 +31 chr10 + 290411 294548 ENST00000473115.1 4 680 MSTRG.2 ZMYND11 1.104755 1.728101 +32 chr10 - 309144 309545 MSTRG.4.1 2 247 MSTRG.4 . 0.000000 0.000000 +33 chr10 - 320130 735683 ENST00000280886.6 37 7971 MSTRG.5 DIP2C 28.017271 43.825703 +34 chr10 - 320192 735683 MSTRG.5.2 38 8077 MSTRG.5 . 69.413925 108.579956 +35 chr10 - 320204 566221 MSTRG.5.5 39 7926 MSTRG.5 . 0.000000 0.000000 +36 chr10 - 320204 644381 MSTRG.5.3 39 7922 MSTRG.5 . 0.000000 0.000000 +37 chr10 - 320204 644381 MSTRG.5.4 37 7724 MSTRG.5 . 0.000000 0.000000 +38 chr10 + 323124 323248 ENST00000579524.1 1 125 MSTRG.6 AL603831.1 0.000000 0.000000 +39 chr10 - 327955 328065 ENST00000364991.1 1 111 MSTRG.7 RNA5SP298 2.099099 3.283492 +40 chr10 - 370579 375541 ENST00000434695.2 3 721 MSTRG.5 DIP2C 0.000000 0.000000 +41 chr10 - 401488 629900 ENST00000381496.3 26 4205 MSTRG.5 DIP2C 0.000000 0.000000 +42 chr10 - 402180 419130 ENST00000540204.1 8 1358 MSTRG.5 DIP2C 0.000000 0.000000 +43 chr10 - 410902 433749 ENST00000421992.1 7 731 MSTRG.5 DIP2C 0.000000 0.000000 +44 chr10 - 476181 476444 ENST00000470784.2 1 264 MSTRG.8 RN7SL754P 0.000000 0.000000 +45 chr10 + 483501 487110 ENST00000425723.2 2 558 MSTRG.9 RP11-490E15.2 0.000000 0.000000 +46 chr10 - 486811 735683 ENST00000423550.1 5 727 MSTRG.5 DIP2C 0.000000 0.000000 +47 chr10 + 674578 677195 ENST00000451601.1 2 1657 MSTRG.10 RP11-809C18.3 0.000000 0.000000 +48 chr10 - 687629 687718 ENST00000578903.1 1 90 MSTRG.11 MIR5699 0.000000 0.000000 +49 chr10 + 695888 698593 ENST00000441152.2 3 2249 MSTRG.12 PRR26 0.000000 0.000000 +50 chr10 + 696017 711109 ENST00000381489.5 3 2838 MSTRG.12 PRR26 0.000000 0.000000 +51 chr10 + 709498 712562 ENST00000443662.1 2 550 MSTRG.12 RP11-809C18.5 0.000000 0.000000 +52 chr10 + 714400 715521 ENST00000608587.1 1 1122 MSTRG.13 RP11-809C18.4 0.000000 0.000000 +53 chr10 + 789932 790898 ENST00000412695.1 2 424 ENSG00000231601.1 RP11-164C1.2 0.000000 0.000000 +54 chr10 - 855213 936689 MSTRG.14.2 18 6075 MSTRG.14 . 3.684060 5.762750 +55 chr10 - 855213 977680 MSTRG.14.1 18 8034 MSTRG.14 . 18.273228 28.583691 +56 chr10 - 855482 977680 MSTRG.14.3 18 5953 MSTRG.14 . 116.547249 182.307724 +57 chr10 - 855482 977680 MSTRG.14.4 19 7836 MSTRG.14 . 21.492159 33.618866 +58 chr10 - 855484 931702 ENST00000316157.3 17 5640 MSTRG.14 LARP4B 5.428641 8.491691 +59 chr10 - 857746 866870 ENST00000609318.1 4 4848 MSTRG.14 LARP4B 2.781207 4.350472 +60 chr10 - 858446 871256 ENST00000448368.1 6 1510 MSTRG.14 LARP4B 5.517903 8.631318 +61 chr10 - 860382 863829 ENST00000608970.1 3 699 MSTRG.14 LARP4B 2.772921 4.337511 +62 chr10 - 860702 861655 ENST00000469487.1 2 859 MSTRG.14 LARP4B 2.371905 3.710226 +63 chr10 - 909683 977680 ENST00000476529.1 6 853 MSTRG.14 LARP4B 0.000000 0.000000 +64 chr10 - 909719 977680 ENST00000406525.2 6 797 MSTRG.14 LARP4B 0.000000 0.000000 +65 chr10 - 910094 977680 ENST00000481118.1 5 685 MSTRG.14 LARP4B 0.000000 0.000000 +66 chr10 - 910181 949455 ENST00000412411.1 5 432 MSTRG.14 LARP4B 0.000000 0.000000 +67 chr10 + 978966 988683 ENST00000435531.1 3 407 ENSG00000229869.1 RP11-363N22.2 0.000000 0.000000 +68 chr10 - 1017097 1034281 ENST00000381466.1 2 1875 ENSG00000205740.1 AL359878.1 0.000000 0.000000 +69 chr10 + 1034338 1065876 ENST00000360803.4 17 4696 MSTRG.15 GTPBP4 449.192871 702.644958 +70 chr10 + 1034402 1056460 ENST00000491635.1 11 2223 MSTRG.15 GTPBP4 25.653864 40.128769 +71 chr10 + 1034402 1065876 ENST00000538293.1 16 4528 MSTRG.15 GTPBP4 0.000000 0.000000 +72 chr10 + 1034646 1043248 ENST00000360059.5 5 756 MSTRG.15 GTPBP4 0.000000 0.000000 +73 chr10 + 1034655 1065876 ENST00000545048.1 17 4800 MSTRG.15 GTPBP4 100.339417 156.954803 +74 chr10 + 1051778 1053260 ENST00000491261.1 2 373 MSTRG.15 GTPBP4 3.637677 5.690196 +75 chr10 + 1058340 1065876 ENST00000483839.2 4 3335 MSTRG.15 GTPBP4 3.418981 5.348103 +76 chr10 - 1064847 1071799 ENST00000277517.1 5 1359 MSTRG.16 IDI2 0.000000 0.000000 +77 chr10 + 1068606 1090138 ENST00000536039.1 3 893 MSTRG.17 IDI2-AS1 0.000000 0.000000 +78 chr10 + 1068608 1090138 ENST00000420381.1 5 1187 MSTRG.17 IDI2-AS1 0.000000 0.000000 +79 chr10 + 1068608 1090138 ENST00000428780.2 4 1054 MSTRG.17 IDI2-AS1 0.000000 0.000000 +80 chr10 + 1068614 1081916 ENST00000434470.1 3 490 MSTRG.17 IDI2-AS1 0.000000 0.000000 +81 chr10 - 1085848 1095110 ENST00000381344.3 5 2301 MSTRG.18 IDI1 1421.486938 2223.545166 +82 chr10 - 1086843 1095110 ENST00000491735.1 4 1133 MSTRG.18 IDI1 72.107033 112.792618 +83 chr10 - 1088233 1088295 ENST00000459467.1 1 63 MSTRG.19 RNU7-163P 14.936508 23.364265 +84 chr10 - 1088489 1094803 ENST00000427898.1 3 907 MSTRG.18 IDI1 12.137464 18.985891 +85 chr10 - 1088572 1095110 ENST00000429642.1 4 1304 MSTRG.18 IDI1 5.617446 8.787026 +86 chr10 - 1088617 1095110 ENST00000482091.1 3 1264 MSTRG.18 IDI1 32.766621 51.254818 +87 chr10 + 1095478 1178557 ENST00000358220.1 14 4902 MSTRG.20 WDR37 0.000000 0.000000 +88 chr10 - 1095714 1102356 MSTRG.21.1 3 4349 MSTRG.21 . 8.297237 12.978861 +89 chr10 - 1096197 1102356 MSTRG.21.2 2 4097 MSTRG.21 . 17.446409 27.290352 +90 chr10 - 1096232 1100338 MSTRG.21.3 2 1740 MSTRG.21 . 1.911934 2.990721 +91 chr10 + 1102293 1178557 MSTRG.20.2 14 4826 MSTRG.20 . 0.000000 0.000000 +92 chr10 + 1102344 1142566 ENST00000381329.1 9 1307 MSTRG.20 WDR37 2.133064 3.336622 +93 chr10 + 1102344 1178557 MSTRG.20.3 14 4962 MSTRG.20 . 5.739637 8.978163 +94 chr10 + 1102382 1178557 MSTRG.20.5 14 4921 MSTRG.20 . 6.396139 10.005089 +95 chr10 + 1102420 1178557 MSTRG.20.6 13 4708 MSTRG.20 . 0.000000 0.000000 +96 chr10 + 1102713 1178557 MSTRG.20.7 14 4997 MSTRG.20 . 36.486103 57.072979 +97 chr10 + 1102713 1178557 MSTRG.20.8 14 4908 MSTRG.20 . 4.451065 6.962528 +98 chr10 + 1102743 1178557 MSTRG.20.9 12 4498 MSTRG.20 . 4.177024 6.533863 +99 chr10 + 1102750 1178557 MSTRG.20.10 12 4580 MSTRG.20 . 4.134717 6.467685 +100 chr10 + 1102763 1178557 MSTRG.20.11 14 4855 MSTRG.20 . 12.422224 19.431324 +101 chr10 + 1102798 1178557 ENST00000263150.4 14 4909 MSTRG.20 WDR37 1.147635 1.795175 +102 chr10 + 1120323 1142186 ENST00000436154.1 8 714 MSTRG.20 WDR37 0.000000 0.000000 +103 chr10 + 1169747 1178557 ENST00000482165.1 4 3951 MSTRG.20 WDR37 0.000000 0.000000 +104 chr10 + 1205708 1210612 ENST00000425630.1 3 2434 ENSG00000229205.2 LINC00200 0.000000 0.000000 +105 chr10 + 1205744 1206937 ENST00000583117.1 2 632 ENSG00000229205.2 LINC00200 0.000000 0.000000 +106 chr10 - 1228073 1779670 ENST00000381312.1 10 3606 MSTRG.22 ADARB2 0.000000 0.000000 +107 chr10 - 1228074 1246325 ENST00000381310.3 3 1835 MSTRG.22 ADARB2 0.000000 0.000000 +108 chr10 - 1228785 1232506 ENST00000474762.1 3 768 MSTRG.22 ADARB2 0.000000 0.000000 +109 chr10 - 1228983 1234186 ENST00000490172.1 3 599 MSTRG.22 ADARB2 0.000000 0.000000 +110 chr10 - 1229091 1246325 ENST00000381305.1 4 703 MSTRG.22 ADARB2 0.000000 0.000000 +111 chr10 - 1245386 1246325 ENST00000477140.1 2 697 MSTRG.22 ADARB2 0.000000 0.000000 +112 chr10 - 1261616 1282593 ENST00000469464.1 3 1741 MSTRG.22 ADARB2 0.000000 0.000000 +113 chr10 - 1403196 1403832 ENST00000432987.1 2 359 MSTRG.23 RP11-398B16.2 0.000000 0.000000 +114 chr10 + 1568832 1599179 ENST00000421697.2 2 637 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +115 chr10 + 1568958 1577868 ENST00000381301.3 3 625 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +116 chr10 - 2047667 2056542 ENST00000413603.1 3 2097 ENSG00000234962.1 LINC00700 0.000000 0.000000 +117 chr10 - 2054459 2056542 ENST00000438372.1 3 777 ENSG00000234962.1 LINC00700 0.000000 0.000000 +118 chr10 - 2054847 2055605 ENST00000454424.1 2 484 ENSG00000234962.1 LINC00700 0.000000 0.000000 +119 chr10 + 2114039 2123291 ENST00000435539.1 2 432 ENSG00000226694.2 RP11-69C17.2 0.000000 0.000000 +120 chr10 + 2140361 2140463 ENST00000517189.1 1 103 ENSG00000252998.1 RNU6-889P 0.000000 0.000000 +121 chr10 + 2208526 2211654 ENST00000421077.1 2 2321 ENSG00000227912.1 RP11-69C17.3 0.000000 0.000000 +122 chr10 - 2211334 2231668 ENST00000418524.2 5 587 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +123 chr10 - 2211341 2218626 ENST00000436003.2 2 196 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +124 chr10 + 2241581 2241682 ENST00000390854.1 1 102 ENSG00000212156.1 RNU6-576P 0.000000 0.000000 +125 chr10 - 2347277 2357269 ENST00000418295.1 3 742 ENSG00000234556.1 LINC00701 0.000000 0.000000 +126 chr10 - 2488447 2489546 ENST00000414107.1 2 756 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +127 chr10 - 2488447 2489546 ENST00000441907.1 2 764 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +128 chr10 - 2488452 2489546 ENST00000439973.1 2 714 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +129 chr10 - 2495329 2495418 ENST00000580586.1 1 90 ENSG00000264261.1 AC024908.1 0.000000 0.000000 +130 chr10 + 2541913 2542762 ENST00000431209.1 2 332 ENSG00000237500.1 RP11-526P5.1 0.000000 0.000000 +131 chr10 + 2543975 2609431 ENST00000438753.1 2 918 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +132 chr10 + 2543995 2579817 ENST00000437289.1 2 320 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +133 chr10 + 2978213 2978633 ENST00000419388.1 1 421 ENSG00000231743.1 RP11-89K18.1 0.000000 0.000000 +134 chr10 + 3052723 3055303 ENST00000439575.1 3 608 ENSG00000234182.1 RP11-118K6.2 0.000000 0.000000 +135 chr10 - 3107576 3109169 MSTRG.25.1 2 1232 MSTRG.25 . 2.805010 4.387706 +136 chr10 - 3107616 3108582 ENST00000607898.1 1 967 MSTRG.25 RP11-118K6.3 4.113990 6.435263 +137 chr10 + 3108525 3143746 ENST00000607886.1 4 432 MSTRG.26 PFKP 0.000000 0.000000 +138 chr10 + 3109712 3178985 ENST00000381125.4 22 2645 MSTRG.26 PFKP 1416.074341 2215.078369 +139 chr10 + 3109864 3111581 ENST00000495715.1 2 152 MSTRG.26 PFKP 0.000000 0.000000 +140 chr10 + 3110819 3178985 ENST00000381075.2 24 2769 MSTRG.26 PFKP 1.442151 2.255868 +141 chr10 + 3111425 3146136 ENST00000421751.1 5 665 MSTRG.26 PFKP 5.782478 9.045177 +142 chr10 + 3112437 3147693 ENST00000407806.2 7 733 MSTRG.26 PFKP 1.151807 1.801701 +143 chr10 + 3146916 3155710 ENST00000415005.1 8 1142 MSTRG.26 PFKP 6.992603 10.938100 +144 chr10 + 3146939 3151672 ENST00000468050.1 6 511 MSTRG.26 PFKP 1.514991 2.369808 +145 chr10 + 3147071 3149501 ENST00000460445.1 3 628 MSTRG.26 PFKP 4.314753 6.749304 +146 chr10 + 3155650 3172175 ENST00000413079.1 5 538 MSTRG.26 PFKP 18.392517 28.770288 +147 chr10 + 3171199 3178985 ENST00000381072.1 6 1698 MSTRG.26 PFKP 32.244682 50.438385 +148 chr10 + 3175427 3179904 ENST00000433193.1 4 453 MSTRG.26 PFKP 2.824726 4.418546 +149 chr10 - 3179920 3180807 ENST00000490510.1 2 778 MSTRG.27 PITRM1 1.598321 2.500156 +150 chr10 - 3179920 3191591 ENST00000464395.1 9 3240 MSTRG.27 PITRM1 31.002928 48.495979 +151 chr10 - 3179920 3215003 MSTRG.27.1 25 3258 MSTRG.27 . 179.242233 280.377655 +152 chr10 - 3179922 3215003 ENST00000224949.4 27 3454 MSTRG.27 PITRM1 243.992004 381.661743 +153 chr10 - 3179922 3215003 ENST00000380989.2 27 3457 MSTRG.27 PITRM1 56.958893 89.097313 +154 chr10 - 3179926 3200345 ENST00000380994.1 16 2645 MSTRG.27 PITRM1 7.032219 11.000070 +155 chr10 - 3180016 3215003 ENST00000451104.2 24 3059 MSTRG.27 PITRM1 3.168771 4.956715 +156 chr10 - 3180883 3186558 ENST00000455371.1 4 673 MSTRG.27 PITRM1 2.736481 4.280510 +157 chr10 - 3183700 3190255 ENST00000451454.1 7 883 MSTRG.27 PITRM1 2.500031 3.910645 +158 chr10 + 3183824 3206477 ENST00000601046.1 4 577 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +159 chr10 + 3183824 3210164 ENST00000598280.1 4 601 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +160 chr10 + 3183864 3190814 ENST00000441377.1 4 3998 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +161 chr10 + 3185241 3190814 ENST00000430356.2 3 3823 MSTRG.28 PITRM1-AS1 2.720166 4.254989 +162 chr10 - 3185675 3187908 ENST00000424714.1 3 489 MSTRG.27 PITRM1 2.945823 4.607971 +163 chr10 - 3193368 3201234 ENST00000430362.1 6 802 MSTRG.27 PITRM1 1.999817 3.128191 +164 chr10 - 3205324 3207526 ENST00000488065.1 2 851 MSTRG.27 PITRM1 5.350040 8.368740 +165 chr10 + 3266008 3269599 ENST00000445932.1 3 597 ENSG00000236968.1 RP11-298E9.5 0.000000 0.000000 +166 chr10 - 3282563 3299466 ENST00000417149.1 4 454 MSTRG.29 RP11-298E9.6 0.000000 0.000000 +167 chr10 + 3291138 3291944 MSTRG.30.1 2 618 MSTRG.30 . 2.362460 3.695451 +168 chr10 + 3308195 3309207 ENST00000436340.1 2 463 ENSG00000227338.1 RP11-195B3.1 0.000000 0.000000 +169 chr10 - 3474575 3478062 MSTRG.31.1 3 2349 MSTRG.31 . 0.000000 0.000000 +170 chr10 + 3494616 3543443 MSTRG.32.1 2 851 MSTRG.32 . 1.472385 2.303162 +171 chr10 - 3529086 3545030 ENST00000413993.1 5 832 MSTRG.33 RP11-482E14.1 0.000000 0.000000 +172 chr10 - 3574286 3579223 ENST00000426811.1 2 430 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +173 chr10 - 3577304 3579049 ENST00000413757.1 2 372 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +174 chr10 - 3599384 3614279 MSTRG.34.1 3 496 MSTRG.34 . 0.000000 0.000000 +175 chr10 - 3710520 3710836 MSTRG.35.1 1 317 MSTRG.35 . 5.312303 8.309711 +176 chr10 + 3793259 3805418 ENST00000421629.2 6 759 ENSG00000229672.2 RP11-184A2.3 0.000000 0.000000 +177 chr10 + 3810107 3810943 ENST00000415358.1 2 313 ENSG00000228353.1 RP11-184A2.2 0.000000 0.000000 +178 chr10 - 3818188 3822421 ENST00000461124.1 3 776 MSTRG.36 KLF6 0.000000 0.000000 +179 chr10 - 3818188 3827473 ENST00000497571.1 4 4662 MSTRG.36 KLF6 267.689667 418.730560 +180 chr10 - 3818189 3827473 ENST00000542957.1 3 4537 MSTRG.36 KLF6 104.941658 164.153809 +181 chr10 - 3821239 3824406 ENST00000173785.4 3 1088 MSTRG.36 KLF6 3.297782 5.158518 +182 chr10 - 3821742 3823832 ENST00000492125.1 2 1576 MSTRG.36 KLF6 19.135250 29.932100 +183 chr10 - 3822519 3827473 ENST00000469435.1 2 2257 MSTRG.36 KLF6 15.863073 24.813635 +184 chr10 - 3824000 3827473 ENST00000380946.3 3 842 MSTRG.36 KLF6 1.732037 2.709319 +185 chr10 + 3827756 3829407 MSTRG.37.1 1 1652 MSTRG.37 . 4.938862 7.725560 +186 chr10 + 3876142 3876920 ENST00000413339.1 2 536 ENSG00000230573.1 RP11-464C19.2 0.000000 0.000000 +187 chr10 + 3976711 3978005 ENST00000432452.2 2 591 ENSG00000226005.3 RP11-464C19.3 0.000000 0.000000 +188 chr10 + 4067132 4070586 ENST00000455525.1 2 633 ENSG00000227101.1 RP11-433J20.2 0.000000 0.000000 +189 chr10 + 4093918 4131205 ENST00000455199.1 4 2287 ENSG00000236990.1 RP11-433J20.1 0.000000 0.000000 +190 chr10 - 4243333 4286104 ENST00000608792.1 3 6300 MSTRG.38 LINC00702 0.000000 0.000000 +191 chr10 - 4277752 4285879 ENST00000454470.1 2 407 MSTRG.38 LINC00702 0.000000 0.000000 +192 chr10 - 4277752 4286104 MSTRG.38.2 3 497 MSTRG.38 . 0.000000 0.000000 +193 chr10 - 4285142 4285981 ENST00000418372.1 2 446 MSTRG.38 LINC00702 0.000000 0.000000 +194 chr10 + 4289424 4299004 MSTRG.39.1 2 1122 MSTRG.39 . 0.000000 0.000000 +195 chr10 + 4426438 4452804 ENST00000454152.1 2 2390 ENSG00000224382.1 LINC00703 0.000000 0.000000 +196 chr10 + 4448694 4451443 ENST00000434902.1 2 869 ENSG00000224382.1 LINC00703 0.000000 0.000000 +197 chr10 - 4457497 4468371 ENST00000420082.1 4 691 ENSG00000230096.1 RP11-34C15.2 0.000000 0.000000 +198 chr10 + 4557144 4557249 ENST00000384396.1 1 106 ENSG00000207124.1 RNU6-163P 0.000000 0.000000 +199 chr10 - 4621911 4720444 MSTRG.40.1 3 2062 MSTRG.40 . 0.000000 0.000000 +200 chr10 - 4692377 4720444 ENST00000430998.2 4 1576 MSTRG.40 LINC00704 0.000000 0.000000 +201 chr10 - 4693295 4699117 ENST00000443994.1 3 543 MSTRG.40 LINC00704 0.000000 0.000000 +202 chr10 - 4693353 4720444 ENST00000449712.1 5 823 MSTRG.40 LINC00704 0.000000 0.000000 +203 chr10 + 4697619 4704611 ENST00000417883.2 3 1745 MSTRG.41 LINC00705 0.000000 0.000000 +204 chr10 - 4728501 4729798 MSTRG.42.1 3 423 MSTRG.42 . 2.768322 4.330317 +205 chr10 - 4787905 4809844 MSTRG.43.1 3 4588 MSTRG.43 . 0.000000 0.000000 +206 chr10 - 4787905 4823145 MSTRG.43.2 3 3442 MSTRG.43 . 0.000000 0.000000 +207 chr10 - 4788110 4809844 MSTRG.43.4 3 2522 MSTRG.43 . 0.000000 0.000000 +208 chr10 - 4788110 4823145 MSTRG.43.3 3 1354 MSTRG.43 . 1.043552 1.632365 +209 chr10 - 4790140 4809844 MSTRG.43.5 2 3691 MSTRG.43 . 0.000000 0.000000 +210 chr10 - 4799235 4809844 MSTRG.43.6 2 3857 MSTRG.43 . 0.000000 0.000000 +211 chr10 + 4828821 4879775 ENST00000533295.1 6 754 MSTRG.44 AKR1E2 0.000000 0.000000 +212 chr10 + 4828901 4882018 ENST00000462718.3 6 693 MSTRG.44 AKR1E2 0.000000 0.000000 +213 chr10 + 4868330 4890575 MSTRG.44.3 7 2727 MSTRG.44 . 5.747055 8.989766 +214 chr10 + 4868359 4883976 MSTRG.44.4 6 3318 MSTRG.44 . 2.841708 4.445110 +215 chr10 + 4868369 4890575 ENST00000474119.1 10 1947 MSTRG.44 AKR1E2 0.000000 0.000000 +216 chr10 + 4868426 4890575 ENST00000463345.1 10 1976 MSTRG.44 AKR1E2 4.559699 7.132458 +217 chr10 + 4868430 4889491 MSTRG.44.7 7 861 MSTRG.44 . 0.000000 0.000000 +218 chr10 + 4868446 4890575 ENST00000298375.7 10 1887 MSTRG.44 AKR1E2 8.230836 12.874992 +219 chr10 + 4868447 4888733 ENST00000525281.1 6 1383 MSTRG.44 AKR1E2 0.000000 0.000000 +220 chr10 + 4868478 4879773 ENST00000525627.1 3 334 MSTRG.44 AKR1E2 0.000000 0.000000 +221 chr10 + 4868488 4888733 MSTRG.44.16 9 3214 MSTRG.44 . 7.205889 11.271731 +222 chr10 + 4868488 4889491 ENST00000532248.1 7 847 MSTRG.44 AKR1E2 4.995203 7.813690 +223 chr10 + 4868488 4889491 MSTRG.44.11 8 1894 MSTRG.44 . 5.535146 8.658290 +224 chr10 + 4868488 4890575 ENST00000334019.4 8 1674 MSTRG.44 AKR1E2 5.181139 8.104539 +225 chr10 + 4868488 4890575 ENST00000345253.5 7 1551 MSTRG.44 AKR1E2 2.731681 4.273001 +226 chr10 + 4868488 4890575 MSTRG.44.12 8 2029 MSTRG.44 . 6.939930 10.855708 +227 chr10 + 4868488 4890575 MSTRG.44.13 10 1897 MSTRG.44 . 5.732831 8.967517 +228 chr10 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0.000000 0.000000 +240 chr10 + 5005641 5014941 ENST00000442997.1 7 746 MSTRG.44 AKR1C1 5.379306 8.414519 +241 chr10 + 5005981 5012133 ENST00000380859.1 6 858 MSTRG.44 AKR1C1 2.822276 4.414714 +242 chr10 + 5007683 5010500 ENST00000476100.1 2 1973 MSTRG.44 AKR1C1 1.076892 1.684516 +243 chr10 - 5029967 5046215 ENST00000380753.4 9 3381 MSTRG.47 AKR1C2 0.000000 0.000000 +244 chr10 - 5029967 5060223 MSTRG.47.1 12 3914 MSTRG.47 . 0.000000 0.000000 +245 chr10 - 5030125 5060223 MSTRG.47.3 9 3083 MSTRG.47 . 3.363034 5.260588 +246 chr10 - 5031626 5046114 ENST00000421196.3 8 1543 MSTRG.47 AKR1C2 15.092622 23.608463 +247 chr10 - 5031966 5060223 ENST00000407674.1 11 1605 MSTRG.47 AKR1C2 0.000000 0.000000 +248 chr10 - 5031981 5046215 ENST00000460124.1 8 2639 MSTRG.47 AKR1C2 17.133755 26.801283 +249 chr10 + 5037680 5039586 ENST00000451575.2 3 445 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +250 chr10 - 5038026 5060223 ENST00000604507.1 7 821 MSTRG.47 AKR1C2 0.000000 0.000000 +251 chr10 + 5038074 5039586 ENST00000440414.1 3 316 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +252 chr10 - 5042103 5046114 ENST00000455190.1 4 1006 MSTRG.47 AKR1C2 0.000000 0.000000 +253 chr10 - 5042495 5046114 ENST00000604184.1 4 614 MSTRG.47 AKR1C2 0.000000 0.000000 +254 chr10 + 5046902 5047034 ENST00000459141.1 1 133 MSTRG.49 U8 0.000000 0.000000 +255 chr10 - 5048187 5060223 ENST00000604428.1 4 600 MSTRG.47 AKR1C2 0.000000 0.000000 +256 chr10 - 5048654 5060223 ENST00000604711.1 4 673 MSTRG.47 AKR1C2 0.000000 0.000000 +257 chr10 - 5052655 5058084 ENST00000603073.1 3 579 MSTRG.47 AKR1C2 0.000000 0.000000 +258 chr10 - 5055499 5057426 ENST00000604439.1 2 646 MSTRG.47 AKR1C2 0.000000 0.000000 +259 chr10 + 5077263 5149878 MSTRG.50.1 11 1895 MSTRG.50 . 434.888794 680.269958 +260 chr10 + 5077263 5149878 MSTRG.50.2 10 1725 MSTRG.50 . 324.198303 507.123566 +261 chr10 + 5077263 5149878 MSTRG.50.3 10 1739 MSTRG.50 . 407.698761 637.738220 +262 chr10 + 5077546 5144402 ENST00000605781.1 6 859 MSTRG.50 AKR1C3 249.226776 389.850189 +263 chr10 + 5077546 5149878 MSTRG.50.4 10 1412 MSTRG.50 . 1168.927368 1828.481567 +264 chr10 + 5077549 5139742 ENST00000470862.2 6 1013 MSTRG.50 AKR1C3 34.819935 54.466694 +265 chr10 + 5077550 5139742 ENST00000480822.1 5 808 MSTRG.50 AKR1C3 79.171501 123.843132 +266 chr10 - 5090055 5090173 ENST00000515931.1 1 119 MSTRG.51 U8 0.000000 0.000000 +267 chr10 + 5090981 5141641 ENST00000602997.1 6 671 MSTRG.50 AKR1C3 24.060040 37.635647 +268 chr10 + 5091004 5093862 ENST00000451627.1 2 125 MSTRG.50 RP11-499O7.4 2.596318 4.061261 +269 chr10 + 5119830 5149878 ENST00000605149.1 9 1411 MSTRG.50 AKR1C3 270.830383 423.643402 +270 chr10 + 5119973 5149878 ENST00000439082.2 9 1268 MSTRG.50 AKR1C3 1.345525 2.104722 +271 chr10 - 5135600 5135735 ENST00000459536.1 1 136 MSTRG.52 U8 0.000000 0.000000 +272 chr10 + 5135985 5149878 ENST00000380554.3 9 1807 MSTRG.50 AKR1C3 1482.693237 2319.286377 +273 chr10 + 5136606 5140368 ENST00000480697.2 3 1026 MSTRG.50 AKR1C3 9.923952 15.523430 +274 chr10 + 5136610 5142085 ENST00000605322.1 3 846 MSTRG.50 AKR1C3 31.048557 48.567356 +275 chr10 + 5138337 5139742 ENST00000603312.1 2 550 MSTRG.50 AKR1C3 35.573532 55.645496 +276 chr10 + 5147467 5149878 ENST00000603484.1 2 629 MSTRG.50 AKR1C3 15.352755 24.015373 +277 chr10 + 5152190 5156102 MSTRG.53.1 1 3913 MSTRG.53 . 6.151802 9.622887 +278 chr10 - 5164279 5177418 ENST00000427165.1 5 609 MSTRG.54 AKR1C5P 0.000000 0.000000 +279 chr10 - 5164295 5166124 MSTRG.54.2 3 1240 MSTRG.54 . 0.000000 0.000000 +280 chr10 - 5179314 5227150 MSTRG.55.1 10 1363 MSTRG.55 . 0.000000 0.000000 +281 chr10 - 5196335 5202333 ENST00000473890.1 5 645 MSTRG.55 AKR1CL1 0.000000 0.000000 +282 chr10 - 5196655 5202333 ENST00000465430.1 3 1716 MSTRG.55 AKR1CL1 0.000000 0.000000 +283 chr10 - 5202775 5227150 ENST00000472691.1 5 595 MSTRG.55 AKR1CL1 0.000000 0.000000 +284 chr10 - 5202775 5227150 ENST00000488756.1 4 539 MSTRG.55 AKR1CL1 0.000000 0.000000 +285 chr10 - 5202775 5326531 MSTRG.55.4 16 3182 MSTRG.55 . 0.000000 0.000000 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chr10 + 5488572 5494883 ENST00000486354.1 4 622 MSTRG.61 NET1 0.000000 0.000000 +310 chr10 + 5488572 5496485 ENST00000449083.1 4 637 MSTRG.61 NET1 0.000000 0.000000 +311 chr10 + 5488574 5500426 ENST00000380359.3 10 3253 MSTRG.61 NET1 159.772339 249.922104 +312 chr10 + 5494382 5495116 ENST00000465087.1 2 403 MSTRG.61 NET1 1.176665 1.840585 +313 chr10 + 5496344 5498493 ENST00000484741.1 3 757 MSTRG.61 NET1 0.000000 0.000000 +314 chr10 - 5540658 5541533 ENST00000380332.3 1 876 ENSG00000178372.6 CALML5 0.000000 0.000000 +315 chr10 - 5556207 5565140 ENST00000543008.1 2 4531 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +316 chr10 - 5559244 5568209 ENST00000542093.1 3 560 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +317 chr10 - 5559332 5568204 ENST00000545372.1 4 579 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +318 chr10 + 5566924 5568225 ENST00000315238.1 1 1302 ENSG00000178363.3 CALML3 0.000000 0.000000 +319 chr10 - 5566939 5567705 ENST00000442008.2 2 595 ENSG00000256462.1 RP11-116G8.5 0.000000 0.000000 +320 chr10 - 5592096 5592862 MSTRG.62.1 2 505 MSTRG.62 . 0.000000 0.000000 +321 chr10 - 5598987 5601960 MSTRG.63.1 3 464 MSTRG.63 . 0.000000 0.000000 +322 chr10 - 5636951 5638081 MSTRG.64.1 2 738 MSTRG.64 . 0.000000 0.000000 +323 chr10 - 5636954 5638081 ENST00000478294.1 2 697 MSTRG.64 RP13-463N16.6 1.668580 2.610058 +324 chr10 - 5650438 5652756 ENST00000425246.1 5 613 ENSG00000231483.1 RP11-336A10.5 0.000000 0.000000 +325 chr10 - 5658825 5660124 ENST00000427341.1 3 657 ENSG00000228951.1 RP11-336A10.4 0.000000 0.000000 +326 chr10 + 5666894 5667089 ENST00000441526.1 1 196 ENSG00000228685.1 RP11-336A10.7 0.000000 0.000000 +327 chr10 + 5673426 5673716 ENST00000495609.2 1 291 ENSG00000240577.2 RN7SL445P 0.000000 0.000000 +328 chr10 - 5680830 5683924 ENST00000493897.1 3 832 MSTRG.65 ASB13 1.763641 2.758756 +329 chr10 - 5680831 5708558 ENST00000357700.6 6 2716 MSTRG.65 ASB13 104.310143 163.165970 +330 chr10 - 5680831 5708558 ENST00000459912.1 7 2797 MSTRG.65 ASB13 21.921888 34.291069 +331 chr10 - 5680831 5708558 ENST00000479033.1 5 2565 MSTRG.65 ASB13 13.085373 20.468647 +332 chr10 - 5690935 5693531 ENST00000482921.1 2 489 MSTRG.65 ASB13 0.000000 0.000000 +333 chr10 + 5726801 5806473 ENST00000328090.5 21 9396 MSTRG.66 FAM208B 25.215935 39.443741 +334 chr10 + 5726801 5806473 MSTRG.66.1 24 9749 MSTRG.66 . 30.129799 47.130199 +335 chr10 + 5726801 5806473 MSTRG.66.2 23 9657 MSTRG.66 . 29.381769 45.960102 +336 chr10 + 5726801 5806473 MSTRG.66.3 21 9226 MSTRG.66 . 23.627413 36.958916 +337 chr10 + 5726801 5806473 MSTRG.66.4 24 9644 MSTRG.66 . 23.917133 37.412109 +338 chr10 + 5726801 5806473 MSTRG.66.5 20 9134 MSTRG.66 . 21.792637 34.088886 +339 chr10 + 5726801 5806473 MSTRG.66.6 22 9511 MSTRG.66 . 30.601681 47.868336 +340 chr10 + 5726801 5806473 MSTRG.66.7 23 9498 MSTRG.66 . 23.486691 36.738792 +341 chr10 + 5726905 5754502 ENST00000477043.1 3 514 MSTRG.66 FAM208B 0.000000 0.000000 +342 chr10 + 5726905 5756170 ENST00000473789.1 4 537 MSTRG.66 FAM208B 0.000000 0.000000 +343 chr10 + 5726911 5762631 ENST00000496681.1 4 522 MSTRG.66 FAM208B 0.000000 0.000000 +344 chr10 + 5726928 5762631 ENST00000480839.2 5 597 MSTRG.66 FAM208B 0.000000 0.000000 +345 chr10 + 5734779 5754881 ENST00000532424.1 4 479 MSTRG.66 FAM208B 0.000000 0.000000 +346 chr10 + 5741411 5751626 ENST00000482419.1 2 424 MSTRG.66 FAM208B 2.356108 3.685516 +347 chr10 + 5741456 5756170 ENST00000463468.1 4 560 MSTRG.66 FAM208B 0.000000 0.000000 +348 chr10 + 5751589 5756537 ENST00000527124.1 3 574 MSTRG.66 FAM208B 5.644855 8.829901 +349 chr10 - 5754137 5786030 ENST00000411512.2 2 736 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +350 chr10 - 5754383 5756386 ENST00000596567.1 2 945 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +351 chr10 + 5768789 5773166 ENST00000532080.1 3 912 MSTRG.66 FAM208B 0.000000 0.000000 +352 chr10 + 5772625 5782460 ENST00000380270.3 2 1422 MSTRG.66 FAM208B 0.000000 0.000000 +353 chr10 + 5800892 5803764 ENST00000487196.1 2 576 MSTRG.66 FAM208B 0.000000 0.000000 +354 chr10 + 5802803 5806473 ENST00000459693.1 2 2611 MSTRG.66 FAM208B 1.125538 1.760610 +355 chr10 - 5807186 5855512 ENST00000380191.4 11 2412 MSTRG.68 GDI2 2495.359863 3903.338379 +356 chr10 - 5807192 5811352 ENST00000479928.1 3 2499 MSTRG.68 GDI2 18.790035 29.392101 +357 chr10 - 5807812 5827944 ENST00000447751.1 6 893 MSTRG.68 GDI2 44.877419 70.198997 +358 chr10 - 5807884 5855512 ENST00000380132.4 12 1797 MSTRG.68 GDI2 147.332809 230.463699 +359 chr10 - 5807917 5855512 ENST00000380181.3 10 1546 MSTRG.68 GDI2 288.841492 451.817078 +360 chr10 - 5815805 5855512 ENST00000456041.1 7 1080 MSTRG.68 GDI2 20.860695 32.631107 +361 chr10 + 5818034 5818821 ENST00000603087.1 1 788 MSTRG.69 NRBF2P5 0.000000 0.000000 +362 chr10 - 5827829 5855512 ENST00000418688.1 4 756 MSTRG.68 GDI2 0.000000 0.000000 +363 chr10 - 5827945 5856292 ENST00000608581.1 5 634 MSTRG.68 GDI2 22.848413 35.740376 +364 chr10 - 5827969 5884095 ENST00000380127.1 7 584 MSTRG.68 GDI2 0.000000 0.000000 +365 chr10 - 5836871 5855512 ENST00000609712.1 5 739 MSTRG.68 GDI2 6.183686 9.672761 +366 chr10 + 5855610 5858572 MSTRG.70.1 1 2963 MSTRG.70 . 7.270330 11.372532 +367 chr10 + 5855948 5858572 ENST00000608273.1 2 2444 MSTRG.70 RP11-318E3.9 0.000000 0.000000 +368 chr10 - 5902878 5931954 MSTRG.71.1 8 3707 MSTRG.71 . 12.074533 18.887455 +369 chr10 - 5902878 5931954 MSTRG.71.2 9 3232 MSTRG.71 . 10.748424 16.813101 +370 chr10 - 5902878 5931954 MSTRG.71.3 9 3684 MSTRG.71 . 13.195441 20.640821 +371 chr10 - 5903580 5931954 ENST00000380094.5 8 2831 MSTRG.71 ANKRD16 3.757828 5.878140 +372 chr10 - 5903768 5904654 ENST00000430852.1 2 586 MSTRG.71 RP11-318E3.4 0.000000 0.000000 +373 chr10 - 5918136 5931954 MSTRG.71.6 8 2285 MSTRG.71 . 0.000000 0.000000 +374 chr10 - 5920050 5931954 ENST00000380092.4 7 1766 MSTRG.71 ANKRD16 13.313511 20.825510 +375 chr10 - 5920085 5931954 ENST00000191063.8 6 1652 MSTRG.71 ANKRD16 8.917851 13.949649 +376 chr10 - 5924666 5930030 ENST00000492368.1 4 838 MSTRG.71 ANKRD16 7.362673 11.516978 +377 chr10 + 5931535 5979556 ENST00000397269.3 22 3665 MSTRG.72 FBXO18 0.000000 0.000000 +378 chr10 + 5932194 5979556 ENST00000362091.4 21 3560 MSTRG.72 FBXO18 83.223892 130.182053 +379 chr10 + 5932211 5953091 ENST00000470089.1 5 1153 MSTRG.72 FBXO18 5.396347 8.441175 +380 chr10 + 5932211 5979168 MSTRG.72.3 22 3206 MSTRG.72 . 8.903598 13.927354 +381 chr10 + 5932243 5948595 ENST00000462507.1 4 917 MSTRG.72 FBXO18 0.000000 0.000000 +382 chr10 + 5932243 5969504 MSTRG.72.7 20 2993 MSTRG.72 . 19.230038 30.080372 +383 chr10 + 5932243 5979556 MSTRG.72.5 20 3355 MSTRG.72 . 55.343521 86.570480 +384 chr10 + 5932243 5979556 MSTRG.72.6 23 4178 MSTRG.72 . 101.009697 158.003281 +385 chr10 + 5933788 5969504 MSTRG.72.9 19 8474 MSTRG.72 . 31.582985 49.403328 +386 chr10 + 5936349 5979556 ENST00000379999.5 22 3702 MSTRG.72 FBXO18 32.940491 51.526794 +387 chr10 + 5945129 5951257 ENST00000469009.1 5 943 MSTRG.72 FBXO18 0.000000 0.000000 +388 chr10 + 5948469 5951441 ENST00000494526.1 3 578 MSTRG.72 FBXO18 4.148742 6.489624 +389 chr10 + 5956141 5957907 ENST00000460453.1 2 634 MSTRG.72 FBXO18 10.496360 16.418812 +390 chr10 + 5959025 5959639 ENST00000489042.1 2 533 MSTRG.72 FBXO18 0.000000 0.000000 +391 chr10 + 5963309 5966471 ENST00000475867.1 3 1022 MSTRG.72 FBXO18 4.684652 7.327914 +392 chr10 + 5963317 5979168 ENST00000461504.1 9 912 MSTRG.72 FBXO18 1.545961 2.418252 +393 chr10 + 5965534 5969504 ENST00000485290.1 4 557 MSTRG.72 FBXO18 0.000000 0.000000 +394 chr10 + 5967227 5969504 ENST00000496013.1 2 336 MSTRG.72 FBXO18 1.492070 2.333954 +395 chr10 + 5967374 5970636 ENST00000479433.1 3 527 MSTRG.72 FBXO18 1.904147 2.978541 +396 chr10 + 5967374 5971829 ENST00000470353.1 3 681 MSTRG.72 FBXO18 1.685040 2.635805 +397 chr10 - 5976233 5987876 ENST00000397264.4 2 3499 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +398 chr10 - 5977257 5987876 MSTRG.73.2 2 615 MSTRG.73 . 0.000000 0.000000 +399 chr10 + 5978596 5979556 ENST00000481029.1 2 486 MSTRG.72 FBXO18 1.544756 2.416367 +400 chr10 - 5985453 5987876 ENST00000448685.1 2 685 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +401 chr10 - 5985467 5987876 ENST00000454321.1 2 545 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +402 chr10 - 5990855 6002530 ENST00000435171.2 4 659 MSTRG.74 IL15RA 0.000000 0.000000 +403 chr10 - 5990898 6010891 MSTRG.74.2 6 5050 MSTRG.74 . 0.000000 0.000000 +404 chr10 - 5990898 6010891 MSTRG.74.3 7 5029 MSTRG.74 . 0.000000 0.000000 +405 chr10 - 5990938 6019177 MSTRG.74.5 6 5123 MSTRG.74 . 0.000000 0.000000 +406 chr10 - 5990938 6020150 MSTRG.74.4 8 5520 MSTRG.74 . 0.000000 0.000000 +407 chr10 - 5994142 6020150 MSTRG.74.6 7 2163 MSTRG.74 . 1.558875 2.438453 +408 chr10 - 5994334 6019739 ENST00000379977.3 7 1812 MSTRG.74 IL15RA 0.000000 0.000000 +409 chr10 - 5994335 6019739 ENST00000397248.2 7 1811 MSTRG.74 IL15RA 0.000000 0.000000 +410 chr10 - 5994335 6019739 ENST00000397251.3 6 1616 MSTRG.74 IL15RA 0.000000 0.000000 +411 chr10 - 5994344 6020150 ENST00000525219.2 7 1841 MSTRG.74 IL15RA 1.687195 2.639176 +412 chr10 - 5994349 6020150 ENST00000534292.1 7 1836 MSTRG.74 IL15RA 0.000000 0.000000 +413 chr10 - 5994356 6020150 ENST00000379972.2 6 1631 MSTRG.74 IL15RA 0.000000 0.000000 +414 chr10 - 5994356 6020150 ENST00000532948.1 6 1730 MSTRG.74 IL15RA 0.000000 0.000000 +415 chr10 - 5994756 6019739 ENST00000528354.1 6 1291 MSTRG.74 IL15RA 0.000000 0.000000 +416 chr10 - 5994784 6005801 ENST00000447291.1 5 912 MSTRG.74 IL15RA 0.000000 0.000000 +417 chr10 - 5994861 6020150 ENST00000379974.1 5 1030 MSTRG.74 IL15RA 0.000000 0.000000 +418 chr10 - 5995008 6008302 ENST00000532039.1 6 679 MSTRG.74 IL15RA 0.000000 0.000000 +419 chr10 - 5995014 6019739 ENST00000397250.2 5 838 MSTRG.74 IL15RA 0.000000 0.000000 +420 chr10 - 5995115 6019739 ENST00000379971.1 5 857 MSTRG.74 IL15RA 0.000000 0.000000 +421 chr10 - 5995223 6019739 ENST00000397255.3 7 1043 MSTRG.74 IL15RA 0.000000 0.000000 +422 chr10 - 5995223 6019739 ENST00000530685.1 6 944 MSTRG.74 IL15RA 0.000000 0.000000 +423 chr10 - 5998341 6020150 ENST00000397246.3 7 1180 MSTRG.74 IL15RA 0.000000 0.000000 +424 chr10 - 6001717 6019739 ENST00000429135.2 4 801 MSTRG.74 IL15RA 0.000000 0.000000 +425 chr10 - 6002358 6019177 ENST00000453922.1 4 730 MSTRG.74 IL15RA 0.000000 0.000000 +426 chr10 - 6052652 6104288 ENST00000379959.3 8 3176 ENSG00000134460.11 IL2RA 0.000000 0.000000 +427 chr10 - 6054034 6104272 ENST00000379954.1 7 1562 ENSG00000134460.11 IL2RA 0.000000 0.000000 +428 chr10 - 6054760 6104253 ENST00000256876.6 8 1006 ENSG00000134460.11 IL2RA 0.000000 0.000000 +429 chr10 - 6059017 6059157 ENST00000516113.1 1 141 ENSG00000251922.1 SNORA14 0.000000 0.000000 +430 chr10 - 6061416 6067964 ENST00000447847.1 3 326 ENSG00000134460.11 IL2RA 0.000000 0.000000 +431 chr10 + 6067941 6078390 ENST00000440436.1 3 480 ENSG00000229664.1 RP11-536K7.5 0.000000 0.000000 +432 chr10 - 6113477 6113881 ENST00000397237.2 1 405 ENSG00000214015.3 RP11-414H17.2 0.000000 0.000000 +433 chr10 + 6130950 6159420 ENST00000379888.4 12 3332 MSTRG.75 RBM17 97.617203 152.696609 +434 chr10 + 6130962 6159420 MSTRG.75.2 12 4027 MSTRG.75 . 253.046310 395.824860 +435 chr10 + 6131017 6154324 ENST00000437845.2 7 873 MSTRG.75 RBM17 4.013042 6.277356 +436 chr10 + 6131034 6152090 ENST00000432931.1 7 842 MSTRG.75 RBM17 117.517166 183.824905 +437 chr10 + 6131309 6159420 ENST00000446108.1 12 3751 MSTRG.75 RBM17 24.694992 38.628864 +438 chr10 + 6138873 6152090 ENST00000418631.1 6 860 MSTRG.75 RBM17 12.136757 18.984787 +439 chr10 + 6146909 6148340 ENST00000467214.1 2 389 MSTRG.75 RBM17 14.550412 22.760319 +440 chr10 + 6146934 6154664 ENST00000447032.1 5 916 MSTRG.75 RBM17 67.664154 105.842896 +441 chr10 + 6150451 6154664 ENST00000481147.1 3 889 MSTRG.75 RBM17 24.500692 38.324936 +442 chr10 + 6154665 6159420 ENST00000476706.1 5 2618 MSTRG.75 RBM17 10.841031 16.957960 +443 chr10 + 6155326 6159420 ENST00000465906.1 3 2537 MSTRG.75 RBM17 16.921934 26.469946 +444 chr10 + 6155870 6159420 ENST00000467080.1 2 2460 MSTRG.75 RBM17 2.242434 3.507702 +445 chr10 + 6156110 6159420 ENST00000496762.1 2 3170 MSTRG.75 RBM17 6.878033 10.758886 +446 chr10 + 6171977 6172984 MSTRG.76.1 2 758 MSTRG.76 . 0.000000 0.000000 +447 chr10 + 6186881 6277495 ENST00000536985.1 12 3923 MSTRG.77 PFKFB3 3.342962 5.229191 +448 chr10 + 6186897 6277495 ENST00000379789.4 15 4157 MSTRG.77 PFKFB3 75.016800 117.344185 +449 chr10 + 6188279 6277495 ENST00000540253.1 15 4258 MSTRG.77 PFKFB3 0.000000 0.000000 +450 chr10 + 6191586 6191903 ENST00000364711.1 1 318 MSTRG.78 RN7SKP78 0.000000 0.000000 +451 chr10 + 6194159 6194240 ENST00000577482.1 1 82 MSTRG.79 MIR3155A 0.000000 0.000000 +452 chr10 - 6239575 6244656 ENST00000427630.1 2 438 MSTRG.80 RP11-414H17.5 0.000000 0.000000 +453 chr10 + 6244829 6270258 ENST00000317350.4 15 2010 MSTRG.77 PFKFB3 0.000000 0.000000 +454 chr10 + 6244829 6270258 ENST00000461744.1 16 2098 MSTRG.77 PFKFB3 0.000000 0.000000 +455 chr10 + 6244829 6277495 ENST00000379785.1 17 4623 MSTRG.77 PFKFB3 0.000000 0.000000 +456 chr10 + 6244829 6277495 ENST00000467491.1 18 4711 MSTRG.77 PFKFB3 0.000000 0.000000 +457 chr10 + 6244829 6277495 ENST00000477914.1 16 4636 MSTRG.77 PFKFB3 0.000000 0.000000 +458 chr10 + 6244829 6277495 ENST00000490474.1 17 4659 MSTRG.77 PFKFB3 3.634557 5.685315 +459 chr10 + 6244840 6273277 ENST00000379782.3 16 1974 MSTRG.77 PFKFB3 0.000000 0.000000 +460 chr10 + 6244863 6277495 ENST00000360521.2 16 4537 MSTRG.77 PFKFB3 2.364183 3.698147 +461 chr10 + 6244894 6277495 ENST00000379775.4 15 4483 MSTRG.77 PFKFB3 137.151505 214.537704 +462 chr10 + 6263367 6277495 ENST00000450232.1 5 3020 MSTRG.77 PFKFB3 5.675109 8.877225 +463 chr10 + 6264671 6268410 ENST00000487989.1 4 661 MSTRG.77 PFKFB3 2.068587 3.235764 +464 chr10 + 6266129 6277495 ENST00000414237.1 5 2955 MSTRG.77 PFKFB3 1.627629 2.546000 +465 chr10 + 6266129 6277495 ENST00000441697.1 2 2686 MSTRG.77 PFKFB3 0.000000 0.000000 +466 chr10 + 6266129 6277495 ENST00000475881.1 4 2978 MSTRG.77 PFKFB3 0.000000 0.000000 +467 chr10 - 6287694 6287794 ENST00000459607.1 1 101 ENSG00000238366.1 Y_RNA 0.000000 0.000000 +468 chr10 + 6319650 6377944 ENST00000399868.2 7 3086 MSTRG.81 RP11-563J2.2 0.000000 0.000000 +469 chr10 - 6335063 6336647 ENST00000440192.1 4 890 MSTRG.82 SDCBPP1 0.000000 0.000000 +470 chr10 + 6392278 6394723 ENST00000391437.1 1 2446 ENSG00000212743.1 DKFZP667F0711 0.000000 0.000000 +471 chr10 - 6469105 6622263 ENST00000263125.5 18 3285 MSTRG.83 PRKCQ 0.000000 0.000000 +472 chr10 - 6469134 6622263 ENST00000397176.2 17 3067 MSTRG.83 PRKCQ 0.000000 0.000000 +473 chr10 - 6469983 6622263 ENST00000539722.1 17 2346 MSTRG.83 PRKCQ 0.000000 0.000000 +474 chr10 + 6622381 6626261 ENST00000445427.1 2 1133 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +475 chr10 + 6622387 6626079 ENST00000455810.1 3 1009 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +476 chr10 + 6625638 6627674 ENST00000414894.1 2 398 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +477 chr10 + 6625641 6626261 ENST00000449648.1 2 422 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +478 chr10 + 6625767 6630358 ENST00000607982.1 3 677 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +479 chr10 + 6625767 6633059 ENST00000608526.1 5 666 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +480 chr10 + 6628186 6628882 ENST00000561822.1 1 697 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +481 chr10 + 6649249 6657912 ENST00000609627.1 3 378 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +482 chr10 + 6649283 6657921 ENST00000607996.1 5 531 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +483 chr10 + 6650310 6658414 ENST00000609346.1 4 938 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +484 chr10 + 6650338 6658359 ENST00000608453.1 3 587 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +485 chr10 + 6660678 6667308 ENST00000448835.2 4 500 ENSG00000225948.2 RP11-554I8.1 0.000000 0.000000 +486 chr10 + 6779344 6780988 ENST00000417112.1 2 917 MSTRG.85 RP11-554I8.2 4.627590 7.238656 +487 chr10 - 6816341 6821132 MSTRG.86.1 2 617 MSTRG.86 . 1.132901 1.772128 +488 chr10 + 6821558 6884868 MSTRG.87.1 4 5454 MSTRG.87 . 0.000000 0.000000 +489 chr10 + 6821560 6884868 ENST00000436383.1 5 3070 MSTRG.87 LINC00707 0.000000 0.000000 +490 chr10 - 6867825 6868186 ENST00000451996.1 1 362 MSTRG.88 AL392086.1 0.000000 0.000000 +491 chr10 - 6933419 6962434 ENST00000457632.1 3 299 ENSG00000234248.1 RP11-799O21.2 0.000000 0.000000 +492 chr10 - 7100287 7100507 MSTRG.89.1 1 221 MSTRG.89 . 7.154451 11.191270 +493 chr10 + 7139114 7139637 ENST00000420049.1 2 436 ENSG00000223581.1 RP11-393K12.2 0.000000 0.000000 +494 chr10 + 7196082 7196198 ENST00000604136.1 1 117 ENSG00000270811.1 RP11-393K12.4 0.000000 0.000000 +495 chr10 - 7200586 7451303 ENST00000361972.4 21 7922 MSTRG.90 SFMBT2 0.000000 0.000000 +496 chr10 - 7200586 7452983 MSTRG.90.1 21 7852 MSTRG.90 . 12.040049 18.833511 +497 chr10 - 7200586 7452983 MSTRG.90.2 21 8043 MSTRG.90 . 24.278208 37.976913 +498 chr10 - 7200600 7452983 MSTRG.90.4 21 8049 MSTRG.90 . 8.309178 12.997540 +499 chr10 - 7204249 7453450 ENST00000397167.1 21 4363 MSTRG.90 SFMBT2 0.000000 0.000000 +500 chr10 - 7326144 7453450 ENST00000379713.3 5 2404 MSTRG.90 SFMBT2 2.996158 4.686707 +501 chr10 - 7337068 7337252 ENST00000421389.1 1 185 MSTRG.91 RP5-1092K5.2 0.000000 0.000000 +502 chr10 - 7390104 7450707 ENST00000379711.2 5 692 MSTRG.90 SFMBT2 0.000000 0.000000 +503 chr10 - 7390249 7453450 ENST00000397160.3 5 678 MSTRG.90 SFMBT2 0.000000 0.000000 +504 chr10 - 7487520 7513904 ENST00000420395.1 4 557 ENSG00000232591.1 RP5-1031D4.2 0.000000 0.000000 +505 chr10 - 7528665 7528771 ENST00000384722.1 1 107 ENSG00000207453.1 RNU6-535P 0.000000 0.000000 +506 chr10 + 7575169 7578527 ENST00000414631.1 3 714 ENSG00000230121.1 RP11-385N23.1 0.000000 0.000000 +507 chr10 - 7601232 7708961 ENST00000256861.6 14 6749 MSTRG.92 ITIH5 0.000000 0.000000 +508 chr10 - 7601756 7708961 ENST00000397146.2 12 2194 MSTRG.92 ITIH5 0.000000 0.000000 +509 chr10 - 7604386 7664440 ENST00000298441.6 10 5734 MSTRG.92 ITIH5 0.000000 0.000000 +510 chr10 - 7605045 7708961 ENST00000446830.2 14 2936 MSTRG.92 ITIH5 0.000000 0.000000 +511 chr10 - 7608000 7612363 ENST00000473591.1 3 782 MSTRG.92 ITIH5 0.000000 0.000000 +512 chr10 - 7611125 7618854 ENST00000492668.1 3 1116 MSTRG.92 ITIH5 0.000000 0.000000 +513 chr10 - 7613368 7682818 ENST00000434980.1 9 2727 MSTRG.92 ITIH5 0.000000 0.000000 +514 chr10 - 7613368 7708961 ENST00000397145.2 12 3132 MSTRG.92 ITIH5 0.000000 0.000000 +515 chr10 - 7614735 7620667 ENST00000468389.1 3 1393 MSTRG.92 ITIH5 0.000000 0.000000 +516 chr10 - 7614735 7664440 ENST00000476417.1 6 6945 MSTRG.92 ITIH5 0.000000 0.000000 +517 chr10 - 7618855 7659245 ENST00000461751.1 7 999 MSTRG.92 ITIH5 0.000000 0.000000 +518 chr10 + 7745232 7791483 ENST00000358415.4 21 3193 ENSG00000151655.13 ITIH2 0.000000 0.000000 +519 chr10 + 7745309 7755346 ENST00000473227.1 5 654 ENSG00000151655.13 ITIH2 0.000000 0.000000 +520 chr10 + 7745331 7762864 ENST00000480387.1 6 573 ENSG00000151655.13 ITIH2 0.000000 0.000000 +521 chr10 + 7745343 7763660 ENST00000429820.1 7 767 ENSG00000151655.13 ITIH2 0.000000 0.000000 +522 chr10 + 7745363 7791302 ENST00000379587.4 20 2848 ENSG00000151655.13 ITIH2 0.000000 0.000000 +523 chr10 + 7771828 7774436 ENST00000477751.1 3 591 ENSG00000151655.13 ITIH2 0.000000 0.000000 +524 chr10 - 7792925 7829990 ENST00000379562.4 13 6394 MSTRG.93 KIN 31.549065 49.350273 +525 chr10 - 7795188 7808066 ENST00000498098.1 6 817 MSTRG.93 KIN 0.000000 0.000000 +526 chr10 - 7795188 7829990 MSTRG.93.2 14 3782 MSTRG.93 . 12.393386 19.386215 +527 chr10 - 7795188 7829990 MSTRG.93.3 13 3687 MSTRG.93 . 5.700185 8.916450 +528 chr10 - 7795188 7829990 MSTRG.93.4 13 3684 MSTRG.93 . 2.464996 3.855843 +529 chr10 - 7795276 7829990 ENST00000535925.1 14 1618 MSTRG.93 KIN 8.769119 13.716996 +530 chr10 - 7797777 7808347 ENST00000463666.1 6 699 MSTRG.93 KIN 0.000000 0.000000 +531 chr10 - 7797798 7808347 ENST00000471320.1 5 910 MSTRG.93 KIN 1.351202 2.113603 +532 chr10 - 7801234 7829990 ENST00000543003.1 11 1737 MSTRG.93 KIN 2.980076 4.661551 +533 chr10 - 7803196 7816854 ENST00000460089.1 6 626 MSTRG.93 KIN 4.453817 6.966833 +534 chr10 + 7830092 7849778 ENST00000356708.7 10 1163 MSTRG.94 ATP5C1 554.064514 866.689270 +535 chr10 + 7830110 7849778 ENST00000493053.1 9 1110 MSTRG.94 ATP5C1 35.340385 55.280804 +536 chr10 + 7830122 7838551 ENST00000462760.1 2 573 MSTRG.94 ATP5C1 1.215658 1.901579 +537 chr10 + 7830138 7839009 ENST00000460362.1 3 565 MSTRG.94 ATP5C1 1.891397 2.958596 +538 chr10 + 7830140 7844838 ENST00000541227.1 7 907 MSTRG.94 ATP5C1 9.216933 14.417484 +539 chr10 + 7830140 7849778 ENST00000335698.4 9 1078 MSTRG.94 ATP5C1 2486.908936 3890.119629 +540 chr10 + 7830142 7849778 ENST00000465936.1 4 314 MSTRG.94 ATP5C1 0.000000 0.000000 +541 chr10 + 7830147 7844388 ENST00000460820.2 7 763 MSTRG.94 ATP5C1 0.000000 0.000000 +542 chr10 + 7830173 7841513 ENST00000472202.1 4 782 MSTRG.94 ATP5C1 40.317871 63.066776 +543 chr10 + 7842015 7849778 ENST00000473809.1 6 544 MSTRG.94 ATP5C1 5.940872 9.292943 +544 chr10 + 7844206 7849778 ENST00000480528.1 4 474 MSTRG.94 ATP5C1 5.480143 8.572252 +545 chr10 + 7860467 8058947 ENST00000344293.5 7 5229 MSTRG.95 TAF3 37.650532 58.894421 +546 chr10 + 7860475 8058947 MSTRG.95.2 7 5218 MSTRG.95 . 14.960210 23.401340 +547 chr10 - 7875581 7875920 ENST00000440219.1 1 340 MSTRG.96 RP11-401E9.3 1.936765 3.029563 +548 chr10 - 8092413 8095447 ENST00000355358.1 2 2214 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +549 chr10 - 8092439 8094458 ENST00000420815.1 3 650 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +550 chr10 - 8092439 8094458 ENST00000438755.1 3 675 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +551 chr10 + 8093504 8095047 ENST00000418270.1 3 402 ENSG00000232638.1 RP11-379F12.4 0.000000 0.000000 +552 chr10 - 8094205 8095219 ENST00000417359.1 2 565 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +553 chr10 - 8094206 8095412 ENST00000458727.1 2 820 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +554 chr10 + 8095567 8097859 ENST00000481743.1 2 785 MSTRG.97 GATA3 0.000000 0.000000 +555 chr10 + 8095567 8117161 MSTRG.97.1 6 3054 MSTRG.97 . 2.131921 3.334834 +556 chr10 + 8095593 8117161 MSTRG.97.3 6 3025 MSTRG.97 . 1.020968 1.597038 +557 chr10 + 8096656 8117161 ENST00000379328.3 6 3078 MSTRG.97 GATA3 2.524991 3.949689 +558 chr10 + 8096769 8117161 ENST00000346208.3 6 2962 MSTRG.97 GATA3 0.000000 0.000000 +559 chr10 + 8100362 8117161 ENST00000461472.1 3 2029 MSTRG.97 GATA3 0.000000 0.000000 +560 chr10 + 8203223 8204155 ENST00000451976.1 1 933 ENSG00000225053.1 PRPF38AP1 0.000000 0.000000 +561 chr10 - 8301294 8302767 ENST00000454056.1 2 365 ENSG00000232170.1 LINC00708 0.000000 0.000000 +562 chr10 - 8301294 8310268 ENST00000428165.1 5 916 ENSG00000232170.1 LINC00708 0.000000 0.000000 +563 chr10 + 8340860 8343630 ENST00000413941.1 2 901 ENSG00000226861.1 RP5-1119O21.2 0.000000 0.000000 +564 chr10 + 8442823 8503826 ENST00000413286.1 4 430 ENSG00000226990.1 RP11-543F8.2 0.000000 0.000000 +565 chr10 + 8514682 8514915 ENST00000603398.1 1 234 ENSG00000271251.1 RP11-543F8.3 0.000000 0.000000 +566 chr10 - 8555650 8557069 ENST00000451609.1 1 1420 ENSG00000213771.3 KRT8P37 0.000000 0.000000 +567 chr10 + 8661896 8662571 ENST00000425516.1 1 676 ENSG00000236420.1 CHCHD3P1 0.000000 0.000000 +568 chr10 - 8698679 8698794 ENST00000391203.1 1 116 ENSG00000212505.1 RNA5SP299 0.000000 0.000000 +569 chr10 + 8765973 8766251 ENST00000605632.1 1 279 ENSG00000270234.1 RP11-575N15.1 0.000000 0.000000 +570 chr10 + 8939952 8956559 ENST00000447297.1 4 366 ENSG00000234752.1 RP11-428L9.1 0.000000 0.000000 +571 chr10 + 9012088 9015431 ENST00000456526.1 2 677 ENSG00000223808.1 RP11-428L9.2 0.000000 0.000000 +572 chr10 + 9317796 9329020 ENST00000458168.1 2 494 ENSG00000230014.1 LINC00709 0.000000 0.000000 +573 chr10 - 9763926 9766379 ENST00000450068.1 1 2454 ENSG00000235838.1 HSP90AB7P 0.000000 0.000000 +574 chr10 - 9800746 9801200 ENST00000419836.1 2 344 ENSG00000228636.1 RP5-1051H14.2 0.000000 0.000000 +575 chr10 + 10100685 10105465 ENST00000429539.1 4 575 ENSG00000224788.1 RP5-933E2.1 0.000000 0.000000 +576 chr10 + 10216193 10216528 ENST00000535261.1 1 336 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +577 chr10 + 10216193 10216540 ENST00000439303.1 1 348 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +578 chr10 + 10274574 10274675 ENST00000363979.1 1 102 ENSG00000200849.1 Y_RNA 0.000000 0.000000 +579 chr10 - 10299132 10299429 ENST00000606426.1 1 298 ENSG00000272436.1 CUX2P1 0.000000 0.000000 +580 chr10 - 10407143 10408450 ENST00000455871.1 2 335 ENSG00000234306.1 RP11-271F18.1 0.000000 0.000000 +581 chr10 - 10461501 10504312 ENST00000602311.1 4 505 ENSG00000270111.1 RP11-271F18.4 0.000000 0.000000 +582 chr10 - 10818186 10818624 ENST00000448495.1 1 439 ENSG00000228997.1 RP1-186E20.1 0.000000 0.000000 +583 chr10 - 10826400 10836959 ENST00000415590.2 4 656 MSTRG.98 SFTA1P 0.000000 0.000000 +584 chr10 - 10826400 10836959 ENST00000602763.1 4 636 MSTRG.98 SFTA1P 0.000000 0.000000 +585 chr10 - 10826401 10836959 ENST00000434919.2 3 481 MSTRG.98 SFTA1P 0.000000 0.000000 +586 chr10 - 10826402 10836959 ENST00000446372.2 4 775 MSTRG.98 SFTA1P 0.000000 0.000000 +587 chr10 - 10826413 10836959 MSTRG.98.5 4 784 MSTRG.98 . 0.000000 0.000000 +588 chr10 - 10969021 10988765 ENST00000600516.1 6 659 ENSG00000229240.3 LINC00710 0.000000 0.000000 +589 chr10 - 10976487 10994058 ENST00000428520.2 6 1460 ENSG00000229240.3 LINC00710 0.000000 0.000000 +590 chr10 - 10976903 10978626 ENST00000441855.1 2 514 ENSG00000229240.3 LINC00710 0.000000 0.000000 +591 chr10 - 10988010 10994143 ENST00000596092.1 5 1025 ENSG00000229240.3 LINC00710 0.000000 0.000000 +592 chr10 - 10988011 10994197 ENST00000601050.2 6 994 ENSG00000229240.3 LINC00710 0.000000 0.000000 +593 chr10 - 10988821 10994058 ENST00000450174.2 3 873 ENSG00000229240.3 LINC00710 0.000000 0.000000 +594 chr10 - 10989127 10994129 ENST00000598573.1 2 666 ENSG00000229240.3 LINC00710 0.000000 0.000000 +595 chr10 + 11002114 11012779 ENST00000420825.1 3 537 ENSG00000231496.1 RP1-251M9.2 0.000000 0.000000 +596 chr10 + 11047259 11378666 ENST00000379261.4 14 9233 ENSG00000048740.13 CELF2 0.000000 0.000000 +597 chr10 + 11047351 11373245 ENST00000416382.2 14 2398 ENSG00000048740.13 CELF2 0.000000 0.000000 +598 chr10 - 11052127 11053082 ENST00000437825.1 2 244 ENSG00000228027.1 RP1-251M9.3 0.000000 0.000000 +599 chr10 + 11059893 11378666 ENST00000450189.1 15 7982 ENSG00000048740.13 CELF2 0.000000 0.000000 +600 chr10 + 11060053 11373245 ENST00000542579.1 14 2437 ENSG00000048740.13 CELF2 0.000000 0.000000 +601 chr10 + 11060106 11373245 ENST00000399850.3 14 2384 ENSG00000048740.13 CELF2 0.000000 0.000000 +602 chr10 + 11060106 11373245 ENST00000417956.2 14 2378 ENSG00000048740.13 CELF2 0.000000 0.000000 +603 chr10 + 11072297 11072831 ENST00000428853.2 2 433 ENSG00000229206.2 RP11-397O4.1 0.000000 0.000000 +604 chr10 - 11117094 11140436 ENST00000432370.2 4 853 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +605 chr10 - 11139277 11140123 ENST00000420634.1 2 144 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +606 chr10 + 11206993 11376357 ENST00000354440.2 13 7121 ENSG00000048740.13 CELF2 0.000000 0.000000 +607 chr10 + 11206993 11378666 ENST00000427450.1 15 8036 ENSG00000048740.13 CELF2 0.000000 0.000000 +608 chr10 + 11206993 11378674 ENST00000315874.4 14 8080 ENSG00000048740.13 CELF2 0.000000 0.000000 +609 chr10 + 11207103 11372602 ENST00000608830.1 14 1892 ENSG00000048740.13 CELF2 0.000000 0.000000 +610 chr10 + 11207447 11371252 ENST00000609870.1 10 1549 ENSG00000048740.13 CELF2 0.000000 0.000000 +611 chr10 + 11207447 11373240 ENST00000609692.1 12 2210 ENSG00000048740.13 CELF2 0.000000 0.000000 +612 chr10 + 11207449 11371242 ENST00000354897.3 13 1754 ENSG00000048740.13 CELF2 0.000000 0.000000 +613 chr10 + 11207491 11371055 ENST00000537122.1 11 1406 ENSG00000048740.13 CELF2 0.000000 0.000000 +614 chr10 - 11210885 11213339 ENST00000417273.1 2 430 ENSG00000230322.1 RP3-323N1.2 0.000000 0.000000 +615 chr10 - 11358797 11361847 ENST00000379256.3 2 2468 ENSG00000181800.5 CELF2-AS1 0.000000 0.000000 +616 chr10 - 11495945 11653753 ENST00000609104.1 15 11377 MSTRG.99 USP6NL 67.503510 105.591606 +617 chr10 - 11502509 11574274 ENST00000277575.5 14 4512 MSTRG.99 USP6NL 1.030093 1.611311 +618 chr10 - 11502509 11615840 ENST00000379237.2 14 4650 MSTRG.99 USP6NL 7.139987 11.168645 +619 chr10 - 11605186 11615604 ENST00000443016.1 2 2600 MSTRG.99 USP6NL 15.593418 24.391829 +620 chr10 - 11606126 11615840 ENST00000609853.1 2 1748 MSTRG.99 USP6NL 0.000000 0.000000 +621 chr10 - 11606126 11653753 ENST00000606752.1 3 1911 MSTRG.99 USP6NL 36.126133 56.509899 +622 chr10 + 11653304 11654226 ENST00000604634.1 1 923 MSTRG.100 RP11-138I18.1 0.000000 0.000000 +623 chr10 + 11721674 11722513 ENST00000604086.1 1 840 MSTRG.101 RP11-138I18.2 0.000000 0.000000 +624 chr10 + 11784365 11806069 ENST00000379215.4 5 1649 MSTRG.102 ECHDC3 50.408791 78.851387 +625 chr10 + 11784365 11806069 ENST00000496136.1 6 1767 MSTRG.102 ECHDC3 0.000000 0.000000 +626 chr10 + 11784445 11797607 ENST00000420401.1 4 881 MSTRG.102 ECHDC3 1.607996 2.515290 +627 chr10 + 11789274 11806069 ENST00000422887.1 4 1342 MSTRG.102 ECHDC3 7.920415 12.389420 +628 chr10 + 11789449 11800341 ENST00000495787.1 3 3117 MSTRG.102 ECHDC3 14.434191 22.578520 +629 chr10 + 11865338 11908782 ENST00000474155.1 4 735 MSTRG.103 PROSER2 8.455565 13.226523 +630 chr10 + 11865397 11914276 ENST00000277570.5 4 3333 MSTRG.103 PROSER2 34.361572 53.749706 +631 chr10 + 11873682 11908782 ENST00000444604.1 3 612 MSTRG.103 PROSER2 0.000000 0.000000 +632 chr10 - 11886804 11936699 MSTRG.104.1 5 7842 MSTRG.104 . 55.817513 87.311913 +633 chr10 - 11886873 11936699 MSTRG.104.2 7 8043 MSTRG.104 . 21.418468 33.503601 +634 chr10 - 11891612 11936699 ENST00000445498.1 6 3141 MSTRG.104 PROSER2-AS1 8.711897 13.627487 +635 chr10 - 11899288 11916794 ENST00000453242.1 4 475 MSTRG.104 PROSER2-AS1 0.000000 0.000000 +636 chr10 + 11911643 11914276 ENST00000379200.1 1 2634 MSTRG.103 PROSER2 0.000000 0.000000 +637 chr10 - 11962021 12077896 ENST00000356352.2 21 5569 MSTRG.105 UPF2 5.022993 7.857160 +638 chr10 - 11962021 12084833 ENST00000357604.5 22 5193 MSTRG.105 UPF2 116.195877 181.758102 +639 chr10 - 11962022 12085169 ENST00000397053.2 22 5369 MSTRG.105 UPF2 72.092285 112.769554 +640 chr10 + 11965180 11965287 ENST00000516148.1 1 108 MSTRG.106 RNU6-1095P 0.000000 0.000000 +641 chr10 - 12077058 12085169 ENST00000460569.1 2 640 MSTRG.105 UPF2 0.000000 0.000000 +642 chr10 + 12110960 12165505 MSTRG.107.1 16 5286 MSTRG.107 . 39.166004 61.264984 +643 chr10 + 12110971 12165505 ENST00000263035.4 17 5440 MSTRG.107 DHTKD1 161.315338 252.335709 +644 chr10 + 12111023 12133683 ENST00000437298.1 5 974 MSTRG.107 DHTKD1 0.000000 0.000000 +645 chr10 + 12123523 12139995 ENST00000465617.1 4 811 MSTRG.107 DHTKD1 0.000000 0.000000 +646 chr10 + 12131174 12136300 ENST00000415935.1 3 482 MSTRG.107 DHTKD1 0.000000 0.000000 +647 chr10 + 12136259 12155063 ENST00000448829.1 6 822 MSTRG.107 DHTKD1 0.000000 0.000000 +648 chr10 - 12158279 12158378 ENST00000606801.1 1 100 MSTRG.108 U6 0.000000 0.000000 +649 chr10 + 12160778 12162358 ENST00000479283.1 2 318 MSTRG.107 DHTKD1 1.665998 2.606019 +650 chr10 + 12171636 12197404 ENST00000379051.1 7 708 MSTRG.109 SEC61A2 2.301379 3.599906 +651 chr10 + 12171636 12207411 MSTRG.109.1 12 2481 MSTRG.109 . 30.942091 48.400818 +652 chr10 + 12171640 12207411 ENST00000379033.3 11 2470 MSTRG.109 SEC61A2 17.326698 27.103094 +653 chr10 + 12171664 12207411 MSTRG.109.4 11 2358 MSTRG.109 . 43.342999 67.798798 +654 chr10 + 12171665 12200104 ENST00000441368.1 7 833 MSTRG.109 SEC61A2 0.000000 0.000000 +655 chr10 + 12171693 12211960 ENST00000475268.1 13 2183 MSTRG.109 SEC61A2 1.357906 2.124089 +656 chr10 + 12171698 12207411 ENST00000298428.9 12 2478 MSTRG.109 SEC61A2 77.729889 121.588112 +657 chr10 + 12171698 12211960 ENST00000495368.1 14 2311 MSTRG.109 SEC61A2 4.914455 7.687381 +658 chr10 + 12171700 12211960 ENST00000304267.8 12 2035 MSTRG.109 SEC61A2 3.603996 5.637511 +659 chr10 + 12171701 12200104 ENST00000472221.1 8 907 MSTRG.109 SEC61A2 4.702255 7.355449 +660 chr10 + 12171726 12207411 ENST00000379020.4 11 2252 MSTRG.109 SEC61A2 2.045468 3.199600 +661 chr10 + 12171732 12197309 ENST00000379017.3 7 2090 MSTRG.109 SEC61A2 28.215855 44.136333 +662 chr10 - 12172759 12172815 ENST00000584402.1 1 57 MSTRG.110 MIR548AK 0.000000 0.000000 +663 chr10 + 12178108 12191766 ENST00000457034.1 3 314 MSTRG.109 SEC61A2 0.000000 0.000000 +664 chr10 + 12185139 12200104 ENST00000418772.1 4 496 MSTRG.109 SEC61A2 0.000000 0.000000 +665 chr10 + 12187662 12187765 ENST00000458754.1 1 104 MSTRG.111 snoU13 0.000000 0.000000 +666 chr10 + 12191855 12207411 ENST00000419021.1 5 1643 MSTRG.109 SEC61A2 0.000000 0.000000 +667 chr10 + 12199018 12200284 ENST00000466451.1 2 427 MSTRG.109 SEC61A2 0.000000 0.000000 +668 chr10 - 12207324 12238143 ENST00000491614.1 10 3453 MSTRG.112 NUDT5 367.803345 575.332214 +669 chr10 - 12209575 12238143 ENST00000378937.3 11 1241 MSTRG.112 NUDT5 61.269131 95.839554 +670 chr10 - 12209576 12238143 ENST00000537776.1 10 1201 MSTRG.112 NUDT5 18.967880 29.670294 +671 chr10 - 12209671 12238143 ENST00000378952.3 11 1201 MSTRG.112 NUDT5 51.295464 80.238358 +672 chr10 - 12209737 12221131 ENST00000476462.1 6 622 MSTRG.112 NUDT5 17.919935 28.031057 +673 chr10 - 12211721 12238143 ENST00000378940.3 10 1401 MSTRG.112 NUDT5 48.058495 75.174965 +674 chr10 - 12212231 12238143 ENST00000378927.3 8 1580 MSTRG.112 NUDT5 83.497353 130.609802 +675 chr10 - 12214489 12215812 ENST00000498825.1 2 473 MSTRG.112 NUDT5 14.688528 22.976366 +676 chr10 - 12219842 12238143 ENST00000444732.1 5 709 MSTRG.112 NUDT5 4.897160 7.660328 +677 chr10 + 12237964 12272995 ENST00000429258.2 8 664 MSTRG.113 CDC123 9.147004 14.308098 +678 chr10 + 12237965 12292588 ENST00000281141.4 13 1543 MSTRG.113 CDC123 1293.635742 2023.555054 +679 chr10 + 12238129 12291717 ENST00000455773.3 11 971 MSTRG.113 CDC123 59.493755 93.062439 +680 chr10 + 12238195 12240875 ENST00000467016.1 2 296 MSTRG.113 CDC123 0.000000 0.000000 +681 chr10 + 12238222 12292588 ENST00000378900.2 12 1163 MSTRG.113 CDC123 38.506397 60.233200 +682 chr10 + 12238231 12279265 ENST00000442050.1 8 606 MSTRG.113 CDC123 2.591294 4.053402 +683 chr10 + 12238231 12292588 MSTRG.113.6 11 1052 MSTRG.113 . 34.418991 53.839520 +684 chr10 + 12259413 12292588 ENST00000498747.1 9 950 MSTRG.113 CDC123 1.052489 1.646344 +685 chr10 + 12272947 12292588 ENST00000440613.1 6 685 MSTRG.113 CDC123 2.893688 4.526419 +686 chr10 - 12286750 12289107 ENST00000598961.1 2 1827 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +687 chr10 - 12287627 12289844 ENST00000421657.1 2 1914 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +688 chr10 + 12288053 12292588 ENST00000497963.1 2 1233 MSTRG.113 CDC123 35.744839 55.913460 +689 chr10 + 12303670 12303926 ENST00000582360.1 1 257 ENSG00000265824.1 RN7SL232P 0.000000 0.000000 +690 chr10 - 12370135 12370388 ENST00000583190.1 1 254 ENSG00000264036.1 RN7SL198P 0.000000 0.000000 +691 chr10 + 12391481 12877545 ENST00000378847.3 11 8154 MSTRG.115 CAMK1D 11.979149 18.738251 +692 chr10 + 12391481 12877545 MSTRG.115.1 12 8134 MSTRG.115 . 15.437836 24.148460 +693 chr10 + 12391651 12708948 ENST00000487696.1 2 473 MSTRG.115 CAMK1D 0.000000 0.000000 +694 chr10 + 12391732 12869446 ENST00000378845.1 10 2882 MSTRG.115 CAMK1D 12.969166 20.286873 +695 chr10 + 12391732 12877545 MSTRG.115.4 11 7907 MSTRG.115 . 0.000000 0.000000 +696 chr10 + 12391758 12823236 MSTRG.115.7 6 1421 MSTRG.115 . 2.495878 3.904149 +697 chr10 + 12391758 12877545 MSTRG.115.6 12 7853 MSTRG.115 . 68.960289 107.870361 +698 chr10 + 12457927 12457999 ENST00000516629.1 1 73 MSTRG.116 SNORD45 0.000000 0.000000 +699 chr10 + 12498482 12498630 ENST00000516309.1 1 149 MSTRG.117 RNU6ATAC39P 0.000000 0.000000 +700 chr10 + 12580266 12869446 MSTRG.115.8 10 2774 MSTRG.115 . 0.000000 0.000000 +701 chr10 + 12620752 12620822 ENST00000582492.1 1 71 MSTRG.118 MIR4480 0.000000 0.000000 +702 chr10 - 12767253 12767352 ENST00000408404.1 1 100 MSTRG.119 MIR548Q 0.000000 0.000000 +703 chr10 - 12938627 13043697 ENST00000378825.3 3 2729 MSTRG.120 CCDC3 24.651768 38.561253 +704 chr10 - 12938627 13141811 ENST00000378839.1 7 3339 MSTRG.120 CCDC3 0.000000 0.000000 +705 chr10 - 12966679 12966785 ENST00000391197.1 1 107 MSTRG.121 RNA5SP300 0.000000 0.000000 +706 chr10 - 13099902 13100676 ENST00000441148.1 1 775 MSTRG.122 RPL5P25 3.665161 5.733187 +707 chr10 - 13103634 13141811 MSTRG.120.3 4 895 MSTRG.120 . 0.000000 0.000000 +708 chr10 - 13140536 13141811 MSTRG.120.4 3 511 MSTRG.120 . 0.000000 0.000000 +709 chr10 + 13141449 13180375 ENST00000263036.5 15 3916 MSTRG.123 OPTN 0.000000 0.000000 +710 chr10 + 13141603 13180375 ENST00000378764.2 15 3744 MSTRG.123 OPTN 0.000000 0.000000 +711 chr10 + 13142069 13180375 MSTRG.123.3 15 3622 MSTRG.123 . 13.185466 20.625216 +712 chr10 + 13142070 13180375 MSTRG.123.4 14 3469 MSTRG.123 . 16.566109 25.913351 +713 chr10 + 13142070 13180375 MSTRG.123.5 16 3693 MSTRG.123 . 14.111333 22.073496 +714 chr10 + 13142159 13151662 ENST00000487935.1 3 511 MSTRG.123 OPTN 0.000000 0.000000 +715 chr10 + 13142163 13161040 ENST00000482140.1 5 727 MSTRG.123 OPTN 0.000000 0.000000 +716 chr10 + 13142169 13180375 ENST00000378757.2 14 3388 MSTRG.123 OPTN 17.212811 26.924948 +717 chr10 + 13142173 13158340 ENST00000430081.1 5 861 MSTRG.123 OPTN 2.229700 3.487783 +718 chr10 + 13142173 13180375 ENST00000378748.3 16 3605 MSTRG.123 OPTN 15.236580 23.833651 +719 chr10 + 13142173 13180375 ENST00000378752.3 16 3572 MSTRG.123 OPTN 13.563732 21.216915 +720 chr10 + 13142225 13180375 ENST00000378747.3 15 3484 MSTRG.123 OPTN 10.408482 16.281351 +721 chr10 - 13146574 13146793 ENST00000456003.1 1 220 MSTRG.124 SNRPGP5 6.281818 9.826263 +722 chr10 + 13154487 13158540 ENST00000486862.1 2 423 MSTRG.123 OPTN 1.278251 1.999490 +723 chr10 + 13158268 13165198 ENST00000424614.1 4 664 MSTRG.123 OPTN 11.259000 17.611765 +724 chr10 + 13173319 13180375 ENST00000469025.1 4 2099 MSTRG.123 OPTN 0.000000 0.000000 +725 chr10 - 13181196 13181533 ENST00000442321.1 1 338 ENSG00000234175.1 RP11-730A19.9 0.000000 0.000000 +726 chr10 - 13184185 13184977 ENST00000442900.1 1 793 ENSG00000228330.1 RP11-730A19.5 0.000000 0.000000 +727 chr10 - 13198684 13200136 ENST00000447253.1 1 1453 ENSG00000203414.2 BTBD7P1 0.000000 0.000000 +728 chr10 + 13200491 13201463 MSTRG.125.1 1 973 MSTRG.125 . 1.158273 1.811816 +729 chr10 - 13201477 13201777 ENST00000418616.1 1 301 MSTRG.126 RP11-730A19.7 0.000000 0.000000 +730 chr10 + 13203554 13253104 ENST00000378714.3 20 4547 MSTRG.127 MCM10 181.440582 283.816376 +731 chr10 + 13203579 13214480 ENST00000479669.1 3 475 MSTRG.127 MCM10 0.000000 0.000000 +732 chr10 + 13203579 13253104 ENST00000484800.2 20 4525 MSTRG.127 MCM10 220.473267 344.872833 +733 chr10 + 13206128 13253104 ENST00000378694.1 18 4587 MSTRG.127 MCM10 2.623058 4.103089 +734 chr10 + 13234491 13237580 ENST00000459751.1 2 618 MSTRG.127 MCM10 2.719789 4.254399 +735 chr10 + 13237086 13243872 ENST00000481292.1 4 900 MSTRG.127 MCM10 3.709404 5.802393 +736 chr10 + 13240763 13246526 ENST00000485659.1 3 467 MSTRG.127 MCM10 6.653497 10.407659 +737 chr10 + 13259269 13259375 ENST00000606623.1 1 107 MSTRG.128 RNU6-6P 158.962616 248.655487 +738 chr10 - 13263767 13276331 ENST00000378681.3 5 826 ENSG00000165623.5 UCMA 0.000000 0.000000 +739 chr10 - 13263767 13276334 ENST00000463405.2 4 763 ENSG00000165623.5 UCMA 0.000000 0.000000 +740 chr10 - 13319796 13341763 ENST00000396913.2 8 1732 MSTRG.129 PHYH 5.608641 8.773253 +741 chr10 - 13319800 13342101 ENST00000263038.4 9 1577 MSTRG.129 PHYH 133.292114 208.500687 +742 chr10 - 13319843 13344412 ENST00000396920.3 9 1829 MSTRG.129 PHYH 2.376870 3.717992 +743 chr10 - 13325690 13341763 ENST00000453759.2 7 1097 MSTRG.129 PHYH 1.073461 1.679149 +744 chr10 - 13330412 13342101 ENST00000479604.1 6 691 MSTRG.129 PHYH 0.000000 0.000000 +745 chr10 - 13333461 13336987 ENST00000464049.1 2 1012 MSTRG.129 PHYH 1.665794 2.605700 +746 chr10 - 13337228 13342101 ENST00000463730.1 3 572 MSTRG.129 PHYH 0.000000 0.000000 +747 chr10 - 13350145 13350447 ENST00000429930.1 1 303 ENSG00000226209.1 AL138764.1 0.000000 0.000000 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0.000000 +759 chr10 - 13480501 13570974 ENST00000396900.2 9 2672 MSTRG.132 BEND7 0.000000 0.000000 +760 chr10 - 13480637 13544976 ENST00000341083.3 9 2239 MSTRG.132 BEND7 0.000000 0.000000 +761 chr10 - 13483084 13570974 MSTRG.132.4 9 4034 MSTRG.132 . 2.770315 4.333434 +762 chr10 - 13483084 13570974 MSTRG.132.5 9 7172 MSTRG.132 . 3.629133 5.676831 +763 chr10 - 13483084 13570974 MSTRG.132.6 8 7895 MSTRG.132 . 4.953876 7.749045 +764 chr10 - 13483084 13570974 MSTRG.132.7 9 4335 MSTRG.132 . 1.268021 1.983488 +765 chr10 - 13483087 13570974 MSTRG.132.10 6 7401 MSTRG.132 . 0.000000 0.000000 +766 chr10 - 13483087 13570974 MSTRG.132.11 9 7133 MSTRG.132 . 2.869889 4.489192 +767 chr10 - 13483087 13570974 MSTRG.132.12 10 4091 MSTRG.132 . 0.000000 0.000000 +768 chr10 - 13483087 13570974 MSTRG.132.13 10 4049 MSTRG.132 . 0.000000 0.000000 +769 chr10 - 13483087 13570974 MSTRG.132.8 9 4034 MSTRG.132 . 1.769520 2.767952 +770 chr10 - 13483087 13570974 MSTRG.132.9 8 7853 MSTRG.132 . 3.980892 6.227066 +771 chr10 - 13483088 13523120 ENST00000440282.1 3 6571 MSTRG.132 BEND7 2.615886 4.091870 +772 chr10 - 13483088 13570974 MSTRG.132.14 9 4334 MSTRG.132 . 1.476804 2.310074 +773 chr10 - 13483090 13570974 ENST00000396898.2 9 2375 MSTRG.132 BEND7 0.000000 0.000000 +774 chr10 - 13483113 13570974 MSTRG.132.17 9 2156 MSTRG.132 . 0.000000 0.000000 +775 chr10 - 13483113 13570974 MSTRG.132.18 9 7146 MSTRG.132 . 1.106974 1.731572 +776 chr10 - 13483113 13570974 MSTRG.132.19 7 5631 MSTRG.132 . 0.000000 0.000000 +777 chr10 - 13483114 13570974 MSTRG.132.20 9 2116 MSTRG.132 . 0.000000 0.000000 +778 chr10 - 13483355 13544976 ENST00000378605.3 8 1640 MSTRG.132 BEND7 0.000000 0.000000 +779 chr10 - 13483355 13570974 MSTRG.132.21 10 3820 MSTRG.132 . 1.031882 1.614110 +780 chr10 - 13483399 13570974 MSTRG.132.23 9 6818 MSTRG.132 . 3.866271 6.047771 +781 chr10 - 13484980 13494658 ENST00000480703.1 3 598 MSTRG.132 BEND7 0.000000 0.000000 +782 chr10 - 13484980 13570974 MSTRG.132.24 10 4355 MSTRG.132 . 1.430391 2.237473 +783 chr10 - 13484980 13570974 MSTRG.132.25 9 2400 MSTRG.132 . 0.000000 0.000000 +784 chr10 - 13487290 13494658 ENST00000463303.1 3 442 MSTRG.132 BEND7 0.000000 0.000000 +785 chr10 - 13487316 13523120 ENST00000469555.1 5 695 MSTRG.132 BEND7 0.000000 0.000000 +786 chr10 - 13534692 13538929 ENST00000492675.1 2 349 MSTRG.132 BEND7 0.000000 0.000000 +787 chr10 - 13534692 13570974 MSTRG.132.29 5 1226 MSTRG.132 . 0.000000 0.000000 +788 chr10 - 13538788 13570974 ENST00000466271.1 4 990 MSTRG.132 BEND7 0.000000 0.000000 +789 chr10 - 13553206 13553313 ENST00000365638.1 1 108 MSTRG.133 Y_RNA 0.000000 0.000000 +790 chr10 + 13570516 13572262 ENST00000438431.1 2 380 MSTRG.134 RP11-214D15.2 0.000000 0.000000 +791 chr10 + 13628927 13673142 ENST00000378572.3 10 1991 MSTRG.135 PRPF18 11.532248 18.039188 +792 chr10 + 13628927 13697929 MSTRG.135.1 15 12325 MSTRG.135 . 24.576235 38.443100 +793 chr10 + 13628939 13656086 ENST00000417658.1 10 1088 MSTRG.135 PRPF18 1.124504 1.758993 +794 chr10 + 13628968 13653683 ENST00000320054.4 7 819 MSTRG.135 PRPF18 11.640902 18.209150 +795 chr10 + 13628968 13697929 MSTRG.135.4 15 10144 MSTRG.135 . 29.053736 45.446980 +796 chr10 - 13633460 13634323 ENST00000445338.1 1 864 MSTRG.136 RP11-295P9.2 0.000000 0.000000 +797 chr10 + 13652047 13697929 ENST00000601460.1 7 1204 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +798 chr10 + 13658531 13687074 ENST00000595538.1 5 734 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +799 chr10 + 13672284 13687074 ENST00000596044.1 5 824 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +800 chr10 + 13673143 13687074 ENST00000601075.1 4 923 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +801 chr10 + 13673288 13697929 ENST00000597920.1 4 1893 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +802 chr10 + 13673333 13690230 ENST00000440878.1 3 397 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +803 chr10 + 13673722 13696427 ENST00000601758.1 5 744 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +804 chr10 + 13673768 13697929 ENST00000599639.1 4 1099 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +805 chr10 + 13674680 13697929 ENST00000596499.1 6 1159 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +806 chr10 + 13678997 13687074 ENST00000599378.1 4 603 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +807 chr10 + 13680646 13686563 ENST00000610032.1 1 5918 MSTRG.135 RP11-295P9.3 3.350235 5.240567 +808 chr10 + 13680825 13688669 ENST00000437446.1 2 1852 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +809 chr10 + 13685644 13695446 ENST00000600249.1 6 773 MSTRG.135 RP11-295P9.3 1.798455 2.813213 +810 chr10 - 13685706 13900912 ENST00000358621.4 23 6407 MSTRG.137 FRMD4A 9.407345 14.715333 +811 chr10 - 13685706 13933775 MSTRG.137.2 24 6559 MSTRG.137 . 61.951775 96.907372 +812 chr10 - 13685706 14050897 MSTRG.137.1 23 7174 MSTRG.137 . 5.844533 9.142244 +813 chr10 - 13685712 14372883 ENST00000357447.2 25 6815 MSTRG.137 FRMD4A 0.000000 0.000000 +814 chr10 + 13686576 13690773 ENST00000600501.1 3 793 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +815 chr10 + 13686791 13697929 ENST00000596235.1 6 1237 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +816 chr10 - 13688056 14050897 MSTRG.137.5 24 4860 MSTRG.137 . 1.439801 2.252192 +817 chr10 - 13688272 13696526 ENST00000475325.1 2 875 MSTRG.137 FRMD4A 0.000000 0.000000 +818 chr10 - 13688334 13699173 ENST00000495956.1 3 1337 MSTRG.137 FRMD4A 2.421293 3.787481 +819 chr10 + 13688670 13697929 ENST00000419851.2 4 1380 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +820 chr10 + 13688844 13697929 ENST00000594575.1 5 1355 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +821 chr10 + 13690184 13710595 ENST00000593351.1 3 1120 MSTRG.135 RP11-295P9.3 3.784482 5.919834 +822 chr10 + 13691264 13697929 ENST00000600511.1 4 949 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +823 chr10 + 13691284 13697929 ENST00000593358.1 4 760 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +824 chr10 - 13693905 14372182 ENST00000378503.1 23 3201 MSTRG.137 FRMD4A 0.000000 0.000000 +825 chr10 + 13694052 13697929 ENST00000598625.1 3 1065 MSTRG.135 RP11-295P9.3 4.040743 6.320687 +826 chr10 + 13695825 13697929 ENST00000430721.1 2 1155 MSTRG.135 RP11-295P9.3 3.565126 5.576708 +827 chr10 - 13699174 13750043 MSTRG.137.11 12 2390 MSTRG.137 . 7.696796 12.039627 +828 chr10 - 13699174 13750043 MSTRG.137.13 12 2460 MSTRG.137 . 4.953238 7.748047 +829 chr10 - 13699174 13750043 MSTRG.137.14 10 2565 MSTRG.137 . 5.396943 8.442107 +830 chr10 - 13699174 13750043 MSTRG.137.15 9 2478 MSTRG.137 . 4.797254 7.504051 +831 chr10 - 13699174 13750043 MSTRG.137.17 11 3109 MSTRG.137 . 16.003437 25.033195 +832 chr10 - 13699174 13750043 MSTRG.137.9 11 2424 MSTRG.137 . 5.645667 8.831172 +833 chr10 - 13699174 13933775 MSTRG.137.10 22 2558 MSTRG.137 . 13.208149 20.660700 +834 chr10 - 13699174 14014369 MSTRG.137.16 21 3033 MSTRG.137 . 0.000000 0.000000 +835 chr10 - 13699174 14050897 MSTRG.137.12 23 3789 MSTRG.137 . 0.000000 0.000000 +836 chr10 - 13708224 14014369 ENST00000264546.6 17 2145 MSTRG.137 FRMD4A 0.000000 0.000000 +837 chr10 + 13717646 13717990 ENST00000609756.1 1 345 MSTRG.138 RP11-295P9.12 0.000000 0.000000 +838 chr10 + 13724521 13726874 ENST00000600850.1 2 1978 MSTRG.139 RP11-295P9.8 0.000000 0.000000 +839 chr10 - 13734169 13750043 ENST00000492155.1 3 3017 MSTRG.137 FRMD4A 3.278354 5.128129 +840 chr10 - 13735703 14050897 ENST00000342409.2 14 2106 MSTRG.137 FRMD4A 0.000000 0.000000 +841 chr10 - 13735983 13750043 ENST00000477221.1 4 971 MSTRG.137 FRMD4A 0.000000 0.000000 +842 chr10 + 13746978 13747072 ENST00000410303.1 1 95 MSTRG.140 AL157392.1 0.000000 0.000000 +843 chr10 + 13752415 13754054 ENST00000412388.1 2 373 MSTRG.141 RP11-295P9.6 0.000000 0.000000 +844 chr10 + 13769796 13769916 ENST00000362537.1 1 121 MSTRG.142 RNA5SP301 0.000000 0.000000 +845 chr10 + 13771383 13798200 ENST00000449462.1 3 474 MSTRG.143 RP11-353M9.1 0.000000 0.000000 +846 chr10 + 13912797 13913175 ENST00000475013.1 1 379 MSTRG.144 RP11-308K19.2 0.000000 0.000000 +847 chr10 + 14033815 14049525 ENST00000446193.1 3 570 MSTRG.145 RP11-142M10.2 0.000000 0.000000 +848 chr10 + 14053432 14063601 MSTRG.146.1 2 1693 MSTRG.146 . 0.000000 0.000000 +849 chr10 + 14116283 14129734 ENST00000451617.1 3 920 MSTRG.147 RP11-397C18.2 0.000000 0.000000 +850 chr10 + 14116283 14131638 MSTRG.147.1 5 1432 MSTRG.147 . 0.000000 0.000000 +851 chr10 + 14116702 14120540 MSTRG.147.4 2 235 MSTRG.147 . 0.000000 0.000000 +852 chr10 + 14116702 14128905 MSTRG.147.3 3 441 MSTRG.147 . 0.000000 0.000000 +853 chr10 - 14124946 14504141 ENST00000493380.1 4 1197 MSTRG.137 FRMD4A 0.000000 0.000000 +854 chr10 - 14368174 14504141 ENST00000475141.2 4 1233 MSTRG.137 FRMD4A 0.000000 0.000000 +855 chr10 + 14417237 14432137 MSTRG.148.1 3 3915 MSTRG.148 . 0.000000 0.000000 +856 chr10 + 14417459 14432137 MSTRG.148.2 4 3009 MSTRG.148 . 0.000000 0.000000 +857 chr10 + 14418734 14432137 MSTRG.148.3 3 1684 MSTRG.148 . 0.000000 0.000000 +858 chr10 + 14418887 14432137 MSTRG.148.4 4 2315 MSTRG.148 . 0.000000 0.000000 +859 chr10 + 14418887 14456385 MSTRG.148.5 3 2567 MSTRG.148 . 0.000000 0.000000 +860 chr10 - 14425199 14425276 ENST00000584305.1 1 78 MSTRG.149 MIR4293 0.000000 0.000000 +861 chr10 + 14460801 14481374 MSTRG.150.1 3 861 MSTRG.150 . 0.000000 0.000000 +862 chr10 + 14478575 14478660 ENST00000408444.1 1 86 MSTRG.151 MIR1265 0.000000 0.000000 +863 chr10 - 14560556 14590669 ENST00000378470.1 4 3316 MSTRG.152 FAM107B 240.395676 376.036255 +864 chr10 - 14560556 14598413 MSTRG.152.2 5 3204 MSTRG.152 . 54.118767 84.654678 +865 chr10 - 14560556 14646417 MSTRG.152.1 6 3404 MSTRG.152 . 23.870338 37.338909 +866 chr10 - 14560556 14646417 MSTRG.152.3 6 3387 MSTRG.152 . 0.000000 0.000000 +867 chr10 - 14560556 14646417 MSTRG.152.4 5 3338 MSTRG.152 . 0.000000 0.000000 +868 chr10 - 14560556 14646417 MSTRG.152.5 6 5580 MSTRG.152 . 40.181522 62.853497 +869 chr10 - 14560559 14816896 ENST00000181796.2 5 3785 MSTRG.152 FAM107B 0.000000 0.000000 +870 chr10 - 14561158 14646417 ENST00000468747.1 4 2662 MSTRG.152 FAM107B 7.646556 11.961039 +871 chr10 - 14561512 14646417 ENST00000378467.4 5 2374 MSTRG.152 FAM107B 1.984678 3.104510 +872 chr10 - 14561901 14816896 ENST00000487335.1 6 2509 MSTRG.152 FAM107B 0.000000 0.000000 +873 chr10 - 14562794 14614188 ENST00000378465.3 4 1113 MSTRG.152 FAM107B 0.000000 0.000000 +874 chr10 - 14562850 14614188 ENST00000378458.2 5 1284 MSTRG.152 FAM107B 0.000000 0.000000 +875 chr10 - 14563016 14598360 ENST00000478076.1 4 971 MSTRG.152 FAM107B 0.000000 0.000000 +876 chr10 - 14563072 14614188 ENST00000378462.1 4 768 MSTRG.152 FAM107B 0.000000 0.000000 +877 chr10 - 14563088 14590669 ENST00000481209.1 5 887 MSTRG.152 FAM107B 0.000000 0.000000 +878 chr10 - 14563095 14564224 ENST00000475858.1 2 568 MSTRG.152 FAM107B 0.000000 0.000000 +879 chr10 - 14563136 14596228 ENST00000496330.1 5 697 MSTRG.152 FAM107B 0.000000 0.000000 +880 chr10 - 14563136 14598413 ENST00000492700.1 4 558 MSTRG.152 FAM107B 0.000000 0.000000 +881 chr10 - 14563157 14614338 ENST00000479731.1 4 595 MSTRG.152 FAM107B 0.000000 0.000000 +882 chr10 - 14563193 14614338 ENST00000468492.1 5 625 MSTRG.152 FAM107B 0.000000 0.000000 +883 chr10 - 14563200 14614188 ENST00000452706.2 4 868 MSTRG.152 FAM107B 0.000000 0.000000 +884 chr10 - 14563206 14574709 ENST00000489100.1 4 559 MSTRG.152 FAM107B 0.000000 0.000000 +885 chr10 - 14563211 14598014 ENST00000494865.1 5 691 MSTRG.152 FAM107B 0.000000 0.000000 +886 chr10 - 14563280 14598360 ENST00000475786.1 5 773 MSTRG.152 FAM107B 0.000000 0.000000 +887 chr10 - 14563868 14614188 ENST00000488576.1 5 711 MSTRG.152 FAM107B 0.000000 0.000000 +888 chr10 - 14563869 14595482 ENST00000474143.1 3 496 MSTRG.152 FAM107B 0.000000 0.000000 +889 chr10 - 14563875 14654551 ENST00000442012.1 4 458 MSTRG.152 FAM107B 0.000000 0.000000 +890 chr10 - 14563893 14614188 ENST00000482277.1 4 642 MSTRG.152 FAM107B 0.000000 0.000000 +891 chr10 - 14563944 14614188 ENST00000472095.1 5 632 MSTRG.152 FAM107B 0.000000 0.000000 +892 chr10 - 14571527 14646417 ENST00000471815.1 3 1022 MSTRG.152 FAM107B 0.000000 0.000000 +893 chr10 - 14571954 14614188 ENST00000464952.1 4 748 MSTRG.152 FAM107B 0.000000 0.000000 +894 chr10 - 14576785 14614188 ENST00000495292.1 3 576 MSTRG.152 FAM107B 0.000000 0.000000 +895 chr10 - 14644456 14646417 ENST00000491458.1 2 573 MSTRG.152 FAM107B 4.937149 7.722880 +896 chr10 + 14694741 14703690 ENST00000443282.1 3 357 MSTRG.153 RP11-7C6.1 0.000000 0.000000 +897 chr10 - 14705394 14705493 ENST00000364896.1 1 100 MSTRG.154 RNA5SP302 0.000000 0.000000 +898 chr10 - 14765170 14766054 ENST00000456871.1 1 885 MSTRG.155 RP11-398C13.2 1.400654 2.190957 +899 chr10 - 14860113 14880071 MSTRG.156.1 5 2600 MSTRG.156 . 7.521896 11.766042 +900 chr10 - 14860273 14880071 MSTRG.156.2 6 2561 MSTRG.156 . 0.000000 0.000000 +901 chr10 - 14860304 14880071 MSTRG.156.3 6 2526 MSTRG.156 . 0.000000 0.000000 +902 chr10 - 14861249 14880574 ENST00000378442.1 6 1492 MSTRG.156 CDNF 0.000000 0.000000 +903 chr10 - 14861530 14880071 ENST00000378441.2 4 1041 MSTRG.156 CDNF 0.000000 0.000000 +904 chr10 - 14861884 14870271 ENST00000467405.1 3 529 MSTRG.156 CDNF 0.000000 0.000000 +905 chr10 - 14861887 14878293 ENST00000466269.1 4 585 MSTRG.156 CDNF 0.000000 0.000000 +906 chr10 - 14861979 14880071 ENST00000465530.1 4 690 MSTRG.156 CDNF 1.084274 1.696064 +907 chr10 + 14880163 14913740 ENST00000378372.3 14 1904 MSTRG.157 HSPA14 427.641296 668.933105 +908 chr10 + 14880228 14884845 ENST00000493863.1 4 1108 MSTRG.157 HSPA14 6.383805 9.985795 +909 chr10 + 14880228 14888988 MSTRG.157.2 5 4727 MSTRG.157 . 74.521072 116.568756 +910 chr10 + 14880301 14888988 ENST00000437161.2 4 3941 MSTRG.157 HSPA14 39.610886 61.960880 +911 chr10 + 14880330 14884845 ENST00000493178.1 5 1105 MSTRG.157 HSPA14 3.012537 4.712327 +912 chr10 + 14880436 14891719 ENST00000441647.1 6 630 MSTRG.157 HSPA14 19.053770 29.804647 +913 chr10 + 14892714 14896279 ENST00000470430.1 3 927 MSTRG.157 HSPA14 16.306938 25.507944 +914 chr10 - 14919687 14920685 ENST00000609399.1 1 999 MSTRG.158 RP11-398C13.6 8.811811 13.783778 +915 chr10 + 14920819 14954823 ENST00000378331.5 5 11468 MSTRG.159 SUV39H2 21.388285 33.456383 +916 chr10 + 14920819 14955409 MSTRG.159.1 6 11880 MSTRG.159 . 9.747412 15.247280 +917 chr10 + 14920847 14954823 ENST00000433779.1 6 11087 MSTRG.159 SUV39H2 0.000000 0.000000 +918 chr10 + 14920862 14954823 ENST00000378325.3 6 11031 MSTRG.159 SUV39H2 4.970121 7.774456 +919 chr10 + 14920888 14954823 ENST00000354919.6 6 11545 MSTRG.159 SUV39H2 15.792723 24.703590 +920 chr10 + 14920888 14954823 MSTRG.159.6 6 11586 MSTRG.159 . 9.215311 14.414947 +921 chr10 + 14920888 14955409 MSTRG.159.5 7 11957 MSTRG.159 . 10.085804 15.776606 +922 chr10 + 14920899 14954823 ENST00000313519.5 5 11596 MSTRG.159 SUV39H2 7.590284 11.873016 +923 chr10 + 14920921 14939516 ENST00000420416.1 2 711 MSTRG.159 SUV39H2 3.281562 5.133147 +924 chr10 + 14921123 14954823 MSTRG.159.10 6 11891 MSTRG.159 . 5.594440 8.751040 +925 chr10 + 14921815 14939516 ENST00000412254.1 3 1070 MSTRG.159 SUV39H2 0.000000 0.000000 +926 chr10 + 14923499 14954823 ENST00000358298.6 4 10842 MSTRG.159 SUV39H2 0.000000 0.000000 +927 chr10 - 14939358 14996431 ENST00000378289.4 14 3532 MSTRG.160 DCLRE1C 9.820187 15.361116 +928 chr10 - 14948897 14996431 ENST00000453695.2 14 4011 MSTRG.160 DCLRE1C 17.985121 28.133022 +929 chr10 - 14949878 14996431 ENST00000378246.2 13 2974 MSTRG.160 DCLRE1C 1.722199 2.693930 +930 chr10 - 14950165 14996431 ENST00000357717.2 12 2602 MSTRG.160 DCLRE1C 0.000000 0.000000 +931 chr10 - 14950170 14996431 ENST00000378249.1 12 2630 MSTRG.160 DCLRE1C 0.000000 0.000000 +932 chr10 - 14950170 14996431 ENST00000378254.1 15 2869 MSTRG.160 DCLRE1C 0.000000 0.000000 +933 chr10 - 14950170 14996431 ENST00000378255.1 16 3191 MSTRG.160 DCLRE1C 0.000000 0.000000 +934 chr10 - 14950170 14996431 ENST00000378258.1 15 2823 MSTRG.160 DCLRE1C 1.023161 1.600468 +935 chr10 - 14950170 14996431 ENST00000378278.2 14 2738 MSTRG.160 DCLRE1C 0.000000 0.000000 +936 chr10 - 14950170 14996431 ENST00000396817.2 16 3145 MSTRG.160 DCLRE1C 0.000000 0.000000 +937 chr10 - 14950187 14965674 ENST00000378242.1 3 1933 MSTRG.160 DCLRE1C 0.000000 0.000000 +938 chr10 - 14950187 14996431 MSTRG.160.11 16 2937 MSTRG.160 . 0.000000 0.000000 +939 chr10 - 14950741 14970141 ENST00000492201.1 6 1020 MSTRG.160 DCLRE1C 0.000000 0.000000 +940 chr10 - 14950741 14996431 MSTRG.160.13 15 2307 MSTRG.160 . 0.000000 0.000000 +941 chr10 - 14951169 14953321 ENST00000489845.1 2 294 MSTRG.160 DCLRE1C 0.000000 0.000000 +942 chr10 - 14951169 15059043 MSTRG.160.15 7 780 MSTRG.160 . 0.000000 0.000000 +943 chr10 - 14961795 14970141 ENST00000489161.1 3 253 MSTRG.160 DCLRE1C 0.000000 0.000000 +944 chr10 - 14961795 14996431 MSTRG.160.17 13 1549 MSTRG.160 . 1.219624 1.907783 +945 chr10 - 14970142 14996431 ENST00000418843.1 11 1302 MSTRG.160 DCLRE1C 0.000000 0.000000 +946 chr10 - 14976444 14996431 ENST00000378241.1 10 1247 MSTRG.160 DCLRE1C 0.000000 0.000000 +947 chr10 - 14976722 14996431 ENST00000456122.1 8 1290 MSTRG.160 DCLRE1C 0.000000 0.000000 +948 chr10 + 15001398 15030049 MSTRG.161.1 6 1215 MSTRG.161 . 1.863211 2.914507 +949 chr10 + 15001438 15014850 ENST00000407572.1 3 625 MSTRG.161 MEIG1 1.084114 1.695813 +950 chr10 + 15001438 15014850 ENST00000477770.1 2 458 MSTRG.161 MEIG1 0.000000 0.000000 +951 chr10 + 15001509 15014850 ENST00000496225.2 3 686 MSTRG.161 MEIG1 0.000000 0.000000 +952 chr10 + 15008438 15014850 ENST00000378240.1 2 507 MSTRG.161 MEIG1 0.000000 0.000000 +953 chr10 + 15014554 15030049 ENST00000467536.1 3 548 MSTRG.161 MEIG1 0.000000 0.000000 +954 chr10 - 15028941 15029514 ENST00000431186.2 1 574 MSTRG.162 OR7E110P 0.000000 0.000000 +955 chr10 - 15041049 15042054 ENST00000502808.2 1 1006 MSTRG.163 OR7E26P 0.000000 0.000000 +956 chr10 - 15049860 15050883 ENST00000382617.4 1 1024 MSTRG.164 OR7E115P 0.000000 0.000000 +957 chr10 - 15057071 15130775 ENST00000378211.3 8 997 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +958 chr10 - 15057369 15063862 ENST00000454630.1 5 470 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +959 chr10 + 15074226 15107752 ENST00000428897.1 6 859 MSTRG.165 OLAH 0.000000 0.000000 +960 chr10 + 15074252 15098981 ENST00000413672.1 4 583 MSTRG.165 OLAH 0.000000 0.000000 +961 chr10 + 15080621 15107752 ENST00000429028.1 6 797 MSTRG.165 OLAH 0.000000 0.000000 +962 chr10 + 15085895 15115851 ENST00000378228.3 8 1675 MSTRG.165 OLAH 0.000000 0.000000 +963 chr10 + 15085926 15104083 ENST00000378225.1 4 810 MSTRG.165 OLAH 0.000000 0.000000 +964 chr10 + 15085962 15115851 ENST00000378217.3 9 1767 MSTRG.165 OLAH 0.000000 0.000000 +965 chr10 + 15091722 15110069 ENST00000493912.1 5 491 MSTRG.165 OLAH 0.000000 0.000000 +966 chr10 + 15107537 15115851 ENST00000485251.1 2 982 MSTRG.165 OLAH 0.000000 0.000000 +967 chr10 - 15119522 15130775 ENST00000356189.5 4 1322 MSTRG.160 ACBD7 25.715496 40.225178 +968 chr10 - 15120486 15130715 ENST00000496890.1 4 709 MSTRG.160 ACBD7 0.000000 0.000000 +969 chr10 - 15135262 15135610 ENST00000452090.1 1 349 ENSG00000228312.1 GAPDHP45 0.000000 0.000000 +970 chr10 - 15137384 15139318 ENST00000378207.3 2 1714 MSTRG.166 C10orf111 0.000000 0.000000 +971 chr10 + 15139179 15146256 ENST00000378203.1 3 1302 MSTRG.167 RPP38 33.922192 53.062408 +972 chr10 + 15139214 15148129 ENST00000378201.2 5 833 MSTRG.167 RPP38 0.000000 0.000000 +973 chr10 + 15139236 15181817 ENST00000451677.1 3 323 MSTRG.167 RPP38 1.828722 2.860558 +974 chr10 + 15139330 15146256 ENST00000378202.5 2 1032 MSTRG.167 RPP38 50.241322 78.589424 +975 chr10 + 15139381 15146256 ENST00000378197.4 3 1457 MSTRG.167 RPP38 78.058128 122.101547 +976 chr10 + 15139419 15146256 ENST00000441850.1 2 1300 MSTRG.167 RPP38 36.191589 56.612286 +977 chr10 - 15144583 15151838 ENST00000466201.1 2 1238 MSTRG.168 NMT2 8.320796 13.015712 +978 chr10 - 15147758 15210692 MSTRG.168.2 12 2497 MSTRG.168 . 14.105386 22.064192 +979 chr10 - 15147758 15210692 MSTRG.168.3 13 2540 MSTRG.168 . 17.618786 27.559988 +980 chr10 - 15148372 15161512 ENST00000486786.1 4 803 MSTRG.168 NMT2 0.000000 0.000000 +981 chr10 - 15149865 15210692 ENST00000378165.4 12 2907 MSTRG.168 NMT2 44.074764 68.943451 +982 chr10 - 15150293 15210692 ENST00000378150.1 13 2522 MSTRG.168 NMT2 53.609417 83.857933 +983 chr10 - 15151020 15202124 ENST00000540259.1 12 1832 MSTRG.168 NMT2 1.198321 1.874460 +984 chr10 - 15151098 15210501 ENST00000535341.1 13 1669 MSTRG.168 NMT2 0.000000 0.000000 +985 chr10 - 15174816 15183352 ENST00000478580.1 5 840 MSTRG.168 NMT2 0.000000 0.000000 +986 chr10 - 15196801 15197319 ENST00000415473.1 1 519 MSTRG.169 PPIAP30 0.000000 0.000000 +987 chr10 - 15213035 15213277 ENST00000450788.1 1 243 ENSG00000228181.1 RP11-455B2.9 0.000000 0.000000 +988 chr10 - 15253642 15413061 ENST00000378116.4 8 3955 MSTRG.170 FAM171A1 281.828827 440.847565 +989 chr10 - 15256170 15290814 ENST00000477161.1 3 725 MSTRG.170 FAM171A1 1.337482 2.092141 +990 chr10 + 15279491 15283766 ENST00000433455.1 2 794 MSTRG.171 RP11-25G10.2 0.000000 0.000000 +991 chr10 - 15290638 15413061 ENST00000455654.1 4 605 MSTRG.170 FAM171A1 0.000000 0.000000 +992 chr10 - 15555948 15762124 ENST00000378076.3 30 6755 MSTRG.172 ITGA8 0.000000 0.000000 +993 chr10 - 15638512 15646286 ENST00000477064.1 2 867 MSTRG.172 ITGA8 0.000000 0.000000 +994 chr10 - 15653509 15686220 ENST00000468882.1 4 425 MSTRG.172 ITGA8 0.000000 0.000000 +995 chr10 - 15820169 15860007 ENST00000378036.1 6 2452 MSTRG.173 FAM188A 0.000000 0.000000 +996 chr10 - 15820169 15902519 ENST00000277632.3 15 2381 MSTRG.173 FAM188A 73.154449 114.431030 +997 chr10 - 15820169 15902519 ENST00000477891.1 14 2329 MSTRG.173 FAM188A 50.625961 79.191093 +998 chr10 - 15820853 15824334 ENST00000476912.1 2 469 MSTRG.173 FAM188A 3.519470 5.505291 +999 chr10 - 15820853 15902519 MSTRG.173.4 13 1528 MSTRG.173 . 28.011608 43.816845 +1000 chr10 - 15830827 15879317 ENST00000418767.1 7 986 MSTRG.173 FAM188A 9.777599 15.294500 diff -r 298d81e5e138 -r d3377a16d881 test-data/ASP14_doxycycline_1.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ASP14_doxycycline_1.tabular Wed Jan 14 09:30:42 2026 +0000 @@ -0,0 +1,1001 @@ +t_id chr strand start end t_name num_exons length gene_id gene_name cov FPKM +1 chr10 + 90652 92824 ENST00000416477.1 6 747 ENSG00000237297.1 RP11-631M21.6 0.000000 0.000000 +2 chr10 - 92828 96173 ENST00000447903.2 4 2273 MSTRG.1 TUBB8 0.000000 0.000000 +3 chr10 - 92832 95347 ENST00000309812.4 4 1669 MSTRG.1 TUBB8 0.000000 0.000000 +4 chr10 - 92860 96173 MSTRG.1.3 4 2409 MSTRG.1 . 0.000000 0.000000 +5 chr10 - 93434 95347 ENST00000332708.5 3 958 MSTRG.1 TUBB8 0.000000 0.000000 +6 chr10 - 93518 120103 ENST00000413237.3 5 1968 MSTRG.1 TUBB8 0.000000 0.000000 +7 chr10 - 93645 95347 ENST00000482075.1 3 934 MSTRG.1 TUBB8 0.000000 0.000000 +8 chr10 - 126334 132205 ENST00000423948.1 7 1312 ENSG00000232420.2 IL9RP2 0.000000 0.000000 +9 chr10 + 180359 300577 MSTRG.2.1 15 4363 MSTRG.2 . 29.013720 43.560997 +10 chr10 + 180405 283617 ENST00000439456.1 5 788 MSTRG.2 ZMYND11 0.000000 0.000000 +11 chr10 + 180424 295201 ENST00000381602.4 14 2287 MSTRG.2 ZMYND11 2.152267 3.231399 +12 chr10 + 180424 300577 ENST00000309776.4 15 4404 MSTRG.2 ZMYND11 37.661713 56.545036 +13 chr10 + 180643 295201 ENST00000509513.2 14 2065 MSTRG.2 ZMYND11 14.987186 22.501657 +14 chr10 + 180643 300577 MSTRG.2.5 14 4433 MSTRG.2 . 17.407885 26.136080 +15 chr10 + 180742 300577 ENST00000397959.3 13 3831 MSTRG.2 ZMYND11 19.282242 28.950224 +16 chr10 + 180742 300577 MSTRG.2.7 14 3924 MSTRG.2 . 30.453743 45.723042 +17 chr10 + 181009 300577 ENST00000381591.1 15 4229 MSTRG.2 ZMYND11 14.707173 22.081249 +18 chr10 + 181424 300577 ENST00000381607.4 14 3909 MSTRG.2 ZMYND11 32.572102 48.903526 +19 chr10 + 181424 300577 ENST00000403354.1 13 3831 MSTRG.2 ZMYND11 27.827616 41.780190 +20 chr10 + 181449 300577 ENST00000402736.1 14 3953 MSTRG.2 ZMYND11 40.070293 60.161259 +21 chr10 + 181449 300577 MSTRG.2.12 15 4046 MSTRG.2 . 41.476841 62.273045 +22 chr10 - 200771 200883 ENST00000391029.1 1 113 MSTRG.3 RNA5SP297 0.000000 0.000000 +23 chr10 + 225930 300577 ENST00000602682.1 12 3744 MSTRG.2 ZMYND11 10.770112 16.170174 +24 chr10 + 225933 300577 ENST00000381604.4 15 4091 MSTRG.2 ZMYND11 28.845724 43.308769 +25 chr10 + 225934 283617 ENST00000397955.2 6 673 MSTRG.2 ZMYND11 0.000000 0.000000 +26 chr10 + 225934 300577 ENST00000381584.1 15 4090 MSTRG.2 ZMYND11 38.919537 58.433525 +27 chr10 + 225953 295201 ENST00000558098.2 13 1859 MSTRG.2 ZMYND11 3.386396 5.084311 +28 chr10 + 255833 300577 ENST00000545619.1 11 3616 MSTRG.2 ZMYND11 25.042160 37.598125 +29 chr10 + 255891 300577 ENST00000535374.1 10 3492 MSTRG.2 ZMYND11 26.215017 39.359047 +30 chr10 + 285902 292939 ENST00000488275.1 4 581 MSTRG.2 ZMYND11 4.612303 6.924880 +31 chr10 + 290411 294548 ENST00000473115.1 4 680 MSTRG.2 ZMYND11 1.574206 2.363502 +32 chr10 - 309144 309545 MSTRG.4.1 2 247 MSTRG.4 . 2.307692 3.464753 +33 chr10 - 320130 735683 ENST00000280886.6 37 7971 MSTRG.5 DIP2C 62.379673 93.656410 +34 chr10 - 320192 735683 MSTRG.5.2 38 8077 MSTRG.5 . 29.348915 44.064259 +35 chr10 - 320204 566221 MSTRG.5.5 39 7926 MSTRG.5 . 1.439072 2.160613 +36 chr10 - 320204 644381 MSTRG.5.3 39 7922 MSTRG.5 . 0.000000 0.000000 +37 chr10 - 320204 644381 MSTRG.5.4 37 7724 MSTRG.5 . 0.000000 0.000000 +38 chr10 + 323124 323248 ENST00000579524.1 1 125 MSTRG.6 AL603831.1 0.000000 0.000000 +39 chr10 - 327955 328065 ENST00000364991.1 1 111 MSTRG.7 RNA5SP298 0.000000 0.000000 +40 chr10 - 370579 375541 ENST00000434695.2 3 721 MSTRG.5 DIP2C 0.000000 0.000000 +41 chr10 - 401488 629900 ENST00000381496.3 26 4205 MSTRG.5 DIP2C 0.000000 0.000000 +42 chr10 - 402180 419130 ENST00000540204.1 8 1358 MSTRG.5 DIP2C 0.000000 0.000000 +43 chr10 - 410902 433749 ENST00000421992.1 7 731 MSTRG.5 DIP2C 0.000000 0.000000 +44 chr10 - 476181 476444 ENST00000470784.2 1 264 MSTRG.8 RN7SL754P 0.000000 0.000000 +45 chr10 + 483501 487110 ENST00000425723.2 2 558 MSTRG.9 RP11-490E15.2 0.000000 0.000000 +46 chr10 - 486811 735683 ENST00000423550.1 5 727 MSTRG.5 DIP2C 0.000000 0.000000 +47 chr10 + 674578 677195 ENST00000451601.1 2 1657 MSTRG.10 RP11-809C18.3 0.000000 0.000000 +48 chr10 - 687629 687718 ENST00000578903.1 1 90 MSTRG.11 MIR5699 0.000000 0.000000 +49 chr10 + 695888 698593 ENST00000441152.2 3 2249 MSTRG.12 PRR26 0.000000 0.000000 +50 chr10 + 696017 711109 ENST00000381489.5 3 2838 MSTRG.12 PRR26 0.000000 0.000000 +51 chr10 + 709498 712562 ENST00000443662.1 2 550 MSTRG.12 RP11-809C18.5 0.000000 0.000000 +52 chr10 + 714400 715521 ENST00000608587.1 1 1122 MSTRG.13 RP11-809C18.4 0.000000 0.000000 +53 chr10 + 789932 790898 ENST00000412695.1 2 424 ENSG00000231601.1 RP11-164C1.2 0.000000 0.000000 +54 chr10 - 855213 936689 MSTRG.14.2 18 6075 MSTRG.14 . 7.488032 11.242479 +55 chr10 - 855213 977680 MSTRG.14.1 18 8034 MSTRG.14 . 13.566360 20.368441 +56 chr10 - 855482 977680 MSTRG.14.3 18 5953 MSTRG.14 . 81.587563 122.495003 +57 chr10 - 855482 977680 MSTRG.14.4 19 7836 MSTRG.14 . 13.861415 20.811434 +58 chr10 - 855484 931702 ENST00000316157.3 17 5640 MSTRG.14 LARP4B 4.809031 7.220246 +59 chr10 - 857746 866870 ENST00000609318.1 4 4848 MSTRG.14 LARP4B 2.868809 4.307210 +60 chr10 - 858446 871256 ENST00000448368.1 6 1510 MSTRG.14 LARP4B 2.470201 3.708743 +61 chr10 - 860382 863829 ENST00000608970.1 3 699 MSTRG.14 LARP4B 0.000000 0.000000 +62 chr10 - 860702 861655 ENST00000469487.1 2 859 MSTRG.14 LARP4B 0.000000 0.000000 +63 chr10 - 909683 977680 ENST00000476529.1 6 853 MSTRG.14 LARP4B 0.000000 0.000000 +64 chr10 - 909719 977680 ENST00000406525.2 6 797 MSTRG.14 LARP4B 0.000000 0.000000 +65 chr10 - 910094 977680 ENST00000481118.1 5 685 MSTRG.14 LARP4B 0.000000 0.000000 +66 chr10 - 910181 949455 ENST00000412411.1 5 432 MSTRG.14 LARP4B 0.000000 0.000000 +67 chr10 + 978966 988683 ENST00000435531.1 3 407 ENSG00000229869.1 RP11-363N22.2 0.000000 0.000000 +68 chr10 - 1017097 1034281 ENST00000381466.1 2 1875 ENSG00000205740.1 AL359878.1 0.000000 0.000000 +69 chr10 + 1034338 1065876 ENST00000360803.4 17 4696 MSTRG.15 GTPBP4 350.936707 526.893921 +70 chr10 + 1034402 1056460 ENST00000491635.1 11 2223 MSTRG.15 GTPBP4 20.049452 30.102108 +71 chr10 + 1034402 1065876 ENST00000538293.1 16 4528 MSTRG.15 GTPBP4 0.000000 0.000000 +72 chr10 + 1034646 1043248 ENST00000360059.5 5 756 MSTRG.15 GTPBP4 0.000000 0.000000 +73 chr10 + 1034655 1065876 ENST00000545048.1 17 4800 MSTRG.15 GTPBP4 42.689007 64.092979 +74 chr10 + 1051778 1053260 ENST00000491261.1 2 373 MSTRG.15 GTPBP4 4.127571 6.197107 +75 chr10 + 1058340 1065876 ENST00000483839.2 4 3335 MSTRG.15 GTPBP4 2.509986 3.768476 +76 chr10 - 1064847 1071799 ENST00000277517.1 5 1359 MSTRG.16 IDI2 0.000000 0.000000 +77 chr10 + 1068606 1090138 ENST00000536039.1 3 893 MSTRG.17 IDI2-AS1 1.938983 2.911175 +78 chr10 + 1068608 1090138 ENST00000420381.1 5 1187 MSTRG.17 IDI2-AS1 0.000000 0.000000 +79 chr10 + 1068608 1090138 ENST00000428780.2 4 1054 MSTRG.17 IDI2-AS1 0.000000 0.000000 +80 chr10 + 1068614 1081916 ENST00000434470.1 3 490 MSTRG.17 IDI2-AS1 0.000000 0.000000 +81 chr10 - 1085848 1095110 ENST00000381344.3 5 2301 MSTRG.18 IDI1 318.922302 478.827728 +82 chr10 - 1086843 1095110 ENST00000491735.1 4 1133 MSTRG.18 IDI1 13.239539 19.877752 +83 chr10 - 1088233 1088295 ENST00000459467.1 1 63 MSTRG.19 RNU7-163P 2.444444 3.670071 +84 chr10 - 1088489 1094803 ENST00000427898.1 3 907 MSTRG.18 IDI1 2.388896 3.586672 +85 chr10 - 1088572 1095110 ENST00000429642.1 4 1304 MSTRG.18 IDI1 1.719813 2.582115 +86 chr10 - 1088617 1095110 ENST00000482091.1 3 1264 MSTRG.18 IDI1 11.783767 17.692066 +87 chr10 + 1095478 1178557 ENST00000358220.1 14 4902 MSTRG.20 WDR37 5.225303 7.845234 +88 chr10 - 1095714 1102356 MSTRG.21.1 3 4349 MSTRG.21 . 3.727283 5.596117 +89 chr10 - 1096197 1102356 MSTRG.21.2 2 4097 MSTRG.21 . 13.520062 20.298929 +90 chr10 - 1096232 1100338 MSTRG.21.3 2 1740 MSTRG.21 . 1.365184 2.049678 +91 chr10 + 1102293 1178557 MSTRG.20.2 14 4826 MSTRG.20 . 0.000000 0.000000 +92 chr10 + 1102344 1142566 ENST00000381329.1 9 1307 MSTRG.20 WDR37 3.286864 4.934875 +93 chr10 + 1102344 1178557 MSTRG.20.3 14 4962 MSTRG.20 . 5.321936 7.990319 +94 chr10 + 1102382 1178557 MSTRG.20.5 14 4921 MSTRG.20 . 14.214319 21.341280 +95 chr10 + 1102420 1178557 MSTRG.20.6 13 4708 MSTRG.20 . 2.505866 3.762290 +96 chr10 + 1102713 1178557 MSTRG.20.7 14 4997 MSTRG.20 . 18.481386 27.747826 +97 chr10 + 1102713 1178557 MSTRG.20.8 14 4908 MSTRG.20 . 16.031778 24.070002 +98 chr10 + 1102743 1178557 MSTRG.20.9 12 4498 MSTRG.20 . 9.675159 14.526217 +99 chr10 + 1102750 1178557 MSTRG.20.10 12 4580 MSTRG.20 . 11.802509 17.720205 +100 chr10 + 1102763 1178557 MSTRG.20.11 14 4855 MSTRG.20 . 15.719169 23.600653 +101 chr10 + 1102798 1178557 ENST00000263150.4 14 4909 MSTRG.20 WDR37 18.994318 28.517937 +102 chr10 + 1120323 1142186 ENST00000436154.1 8 714 MSTRG.20 WDR37 0.000000 0.000000 +103 chr10 + 1169747 1178557 ENST00000482165.1 4 3951 MSTRG.20 WDR37 0.000000 0.000000 +104 chr10 + 1205708 1210612 ENST00000425630.1 3 2434 ENSG00000229205.2 LINC00200 0.000000 0.000000 +105 chr10 + 1205744 1206937 ENST00000583117.1 2 632 ENSG00000229205.2 LINC00200 0.000000 0.000000 +106 chr10 - 1228073 1779670 ENST00000381312.1 10 3606 MSTRG.22 ADARB2 0.000000 0.000000 +107 chr10 - 1228074 1246325 ENST00000381310.3 3 1835 MSTRG.22 ADARB2 0.000000 0.000000 +108 chr10 - 1228785 1232506 ENST00000474762.1 3 768 MSTRG.22 ADARB2 0.000000 0.000000 +109 chr10 - 1228983 1234186 ENST00000490172.1 3 599 MSTRG.22 ADARB2 0.000000 0.000000 +110 chr10 - 1229091 1246325 ENST00000381305.1 4 703 MSTRG.22 ADARB2 0.000000 0.000000 +111 chr10 - 1245386 1246325 ENST00000477140.1 2 697 MSTRG.22 ADARB2 0.000000 0.000000 +112 chr10 - 1261616 1282593 ENST00000469464.1 3 1741 MSTRG.22 ADARB2 2.569213 3.857399 +113 chr10 - 1403196 1403832 ENST00000432987.1 2 359 MSTRG.23 RP11-398B16.2 0.000000 0.000000 +114 chr10 + 1568832 1599179 ENST00000421697.2 2 637 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +115 chr10 + 1568958 1577868 ENST00000381301.3 3 625 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +116 chr10 - 2047667 2056542 ENST00000413603.1 3 2097 ENSG00000234962.1 LINC00700 0.000000 0.000000 +117 chr10 - 2054459 2056542 ENST00000438372.1 3 777 ENSG00000234962.1 LINC00700 0.000000 0.000000 +118 chr10 - 2054847 2055605 ENST00000454424.1 2 484 ENSG00000234962.1 LINC00700 0.000000 0.000000 +119 chr10 + 2114039 2123291 ENST00000435539.1 2 432 ENSG00000226694.2 RP11-69C17.2 0.000000 0.000000 +120 chr10 + 2140361 2140463 ENST00000517189.1 1 103 ENSG00000252998.1 RNU6-889P 0.000000 0.000000 +121 chr10 + 2208526 2211654 ENST00000421077.1 2 2321 ENSG00000227912.1 RP11-69C17.3 0.000000 0.000000 +122 chr10 - 2211334 2231668 ENST00000418524.2 5 587 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +123 chr10 - 2211341 2218626 ENST00000436003.2 2 196 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +124 chr10 + 2241581 2241682 ENST00000390854.1 1 102 ENSG00000212156.1 RNU6-576P 0.000000 0.000000 +125 chr10 - 2347277 2357269 ENST00000418295.1 3 742 ENSG00000234556.1 LINC00701 0.000000 0.000000 +126 chr10 - 2488447 2489546 ENST00000414107.1 2 756 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +127 chr10 - 2488447 2489546 ENST00000441907.1 2 764 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +128 chr10 - 2488452 2489546 ENST00000439973.1 2 714 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +129 chr10 - 2495329 2495418 ENST00000580586.1 1 90 ENSG00000264261.1 AC024908.1 0.000000 0.000000 +130 chr10 + 2541913 2542762 ENST00000431209.1 2 332 ENSG00000237500.1 RP11-526P5.1 0.000000 0.000000 +131 chr10 + 2543975 2609431 ENST00000438753.1 2 918 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +132 chr10 + 2543995 2579817 ENST00000437289.1 2 320 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +133 chr10 + 2978213 2978633 ENST00000419388.1 1 421 ENSG00000231743.1 RP11-89K18.1 0.000000 0.000000 +134 chr10 + 3052723 3055303 ENST00000439575.1 3 608 ENSG00000234182.1 RP11-118K6.2 0.000000 0.000000 +135 chr10 - 3107576 3109169 MSTRG.25.1 2 1232 MSTRG.25 . 0.000000 0.000000 +136 chr10 - 3107616 3108582 ENST00000607898.1 1 967 MSTRG.25 RP11-118K6.3 5.710427 8.573595 +137 chr10 + 3108525 3143746 ENST00000607886.1 4 432 MSTRG.26 PFKP 0.000000 0.000000 +138 chr10 + 3109712 3178985 ENST00000381125.4 22 2645 MSTRG.26 PFKP 916.953491 1376.707642 +139 chr10 + 3109864 3111581 ENST00000495715.1 2 152 MSTRG.26 PFKP 0.000000 0.000000 +140 chr10 + 3110819 3178985 ENST00000381075.2 24 2769 MSTRG.26 PFKP 18.683353 28.051058 +141 chr10 + 3111425 3146136 ENST00000421751.1 5 665 MSTRG.26 PFKP 2.389844 3.588095 +142 chr10 + 3112437 3147693 ENST00000407806.2 7 733 MSTRG.26 PFKP 0.000000 0.000000 +143 chr10 + 3146916 3155710 ENST00000415005.1 8 1142 MSTRG.26 PFKP 6.107875 9.170321 +144 chr10 + 3146939 3151672 ENST00000468050.1 6 511 MSTRG.26 PFKP 0.000000 0.000000 +145 chr10 + 3147071 3149501 ENST00000460445.1 3 628 MSTRG.26 PFKP 3.971926 5.963422 +146 chr10 + 3155650 3172175 ENST00000413079.1 5 538 MSTRG.26 PFKP 11.917623 17.893036 +147 chr10 + 3171199 3178985 ENST00000381072.1 6 1698 MSTRG.26 PFKP 16.354887 24.555115 +148 chr10 + 3175427 3179904 ENST00000433193.1 4 453 MSTRG.26 PFKP 3.285432 4.932725 +149 chr10 - 3179920 3180807 ENST00000490510.1 2 778 MSTRG.27 PITRM1 1.753268 2.632344 +150 chr10 - 3179920 3191591 ENST00000464395.1 9 3240 MSTRG.27 PITRM1 69.521469 104.379051 +151 chr10 - 3179920 3215003 MSTRG.27.1 25 3258 MSTRG.27 . 273.697693 410.927826 +152 chr10 - 3179922 3215003 ENST00000224949.4 27 3454 MSTRG.27 PITRM1 188.917419 283.639313 +153 chr10 - 3179922 3215003 ENST00000380989.2 27 3457 MSTRG.27 PITRM1 121.352203 182.197357 +154 chr10 - 3179926 3200345 ENST00000380994.1 16 2645 MSTRG.27 PITRM1 19.127602 28.718048 +155 chr10 - 3180016 3215003 ENST00000451104.2 24 3059 MSTRG.27 PITRM1 0.000000 0.000000 +156 chr10 - 3180883 3186558 ENST00000455371.1 4 673 MSTRG.27 PITRM1 4.982227 7.480281 +157 chr10 - 3183700 3190255 ENST00000451454.1 7 883 MSTRG.27 PITRM1 8.394741 12.603806 +158 chr10 + 3183824 3206477 ENST00000601046.1 4 577 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +159 chr10 + 3183824 3210164 ENST00000598280.1 4 601 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +160 chr10 + 3183864 3190814 ENST00000441377.1 4 3998 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +161 chr10 + 3185241 3190814 ENST00000430356.2 3 3823 MSTRG.28 PITRM1-AS1 1.994077 2.993893 +162 chr10 - 3185675 3187908 ENST00000424714.1 3 489 MSTRG.27 PITRM1 4.644296 6.972914 +163 chr10 - 3193368 3201234 ENST00000430362.1 6 802 MSTRG.27 PITRM1 6.197556 9.304968 +164 chr10 - 3205324 3207526 ENST00000488065.1 2 851 MSTRG.27 PITRM1 7.201329 10.812026 +165 chr10 + 3266008 3269599 ENST00000445932.1 3 597 ENSG00000236968.1 RP11-298E9.5 0.000000 0.000000 +166 chr10 - 3282563 3299466 ENST00000417149.1 4 454 MSTRG.29 RP11-298E9.6 0.000000 0.000000 +167 chr10 + 3291138 3291944 MSTRG.30.1 2 618 MSTRG.30 . 1.553398 2.332261 +168 chr10 + 3308195 3309207 ENST00000436340.1 2 463 ENSG00000227338.1 RP11-195B3.1 0.000000 0.000000 +169 chr10 - 3474575 3478062 MSTRG.31.1 3 2349 MSTRG.31 . 9.644742 14.480549 +170 chr10 + 3494616 3543443 MSTRG.32.1 2 851 MSTRG.32 . 3.571093 5.361614 +171 chr10 - 3529086 3545030 ENST00000413993.1 5 832 MSTRG.33 RP11-482E14.1 0.000000 0.000000 +172 chr10 - 3574286 3579223 ENST00000426811.1 2 430 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +173 chr10 - 3577304 3579049 ENST00000413757.1 2 372 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +174 chr10 - 3599384 3614279 MSTRG.34.1 3 496 MSTRG.34 . 1.064516 1.598257 +175 chr10 - 3710520 3710836 MSTRG.35.1 1 317 MSTRG.35 . 1.072555 1.610327 +176 chr10 + 3793259 3805418 ENST00000421629.2 6 759 ENSG00000229672.2 RP11-184A2.3 0.000000 0.000000 +177 chr10 + 3810107 3810943 ENST00000415358.1 2 313 ENSG00000228353.1 RP11-184A2.2 0.000000 0.000000 +178 chr10 - 3818188 3822421 ENST00000461124.1 3 776 MSTRG.36 KLF6 0.000000 0.000000 +179 chr10 - 3818188 3827473 ENST00000497571.1 4 4662 MSTRG.36 KLF6 701.639099 1053.436157 +180 chr10 - 3818189 3827473 ENST00000542957.1 3 4537 MSTRG.36 KLF6 243.444458 365.505829 +181 chr10 - 3821239 3824406 ENST00000173785.4 3 1088 MSTRG.36 KLF6 1.963534 2.948036 +182 chr10 - 3821742 3823832 ENST00000492125.1 2 1576 MSTRG.36 KLF6 42.888756 64.392883 +183 chr10 - 3822519 3827473 ENST00000469435.1 2 2257 MSTRG.36 KLF6 46.144051 69.280357 +184 chr10 - 3824000 3827473 ENST00000380946.3 3 842 MSTRG.36 KLF6 5.656623 8.492815 +185 chr10 + 3827756 3829407 MSTRG.37.1 1 1652 MSTRG.37 . 1.602300 2.405682 +186 chr10 + 3876142 3876920 ENST00000413339.1 2 536 ENSG00000230573.1 RP11-464C19.2 0.000000 0.000000 +187 chr10 + 3976711 3978005 ENST00000432452.2 2 591 ENSG00000226005.3 RP11-464C19.3 0.000000 0.000000 +188 chr10 + 4067132 4070586 ENST00000455525.1 2 633 ENSG00000227101.1 RP11-433J20.2 0.000000 0.000000 +189 chr10 + 4093918 4131205 ENST00000455199.1 4 2287 ENSG00000236990.1 RP11-433J20.1 0.000000 0.000000 +190 chr10 - 4243333 4286104 ENST00000608792.1 3 6300 MSTRG.38 LINC00702 15.207516 22.832460 +191 chr10 - 4277752 4285879 ENST00000454470.1 2 407 MSTRG.38 LINC00702 1.073287 1.611426 +192 chr10 - 4277752 4286104 MSTRG.38.2 3 497 MSTRG.38 . 4.734791 7.108782 +193 chr10 - 4285142 4285981 ENST00000418372.1 2 446 MSTRG.38 LINC00702 12.176290 18.281397 +194 chr10 + 4289424 4299004 MSTRG.39.1 2 1122 MSTRG.39 . 19.676470 29.542116 +195 chr10 + 4426438 4452804 ENST00000454152.1 2 2390 ENSG00000224382.1 LINC00703 0.000000 0.000000 +196 chr10 + 4448694 4451443 ENST00000434902.1 2 869 ENSG00000224382.1 LINC00703 0.000000 0.000000 +197 chr10 - 4457497 4468371 ENST00000420082.1 4 691 ENSG00000230096.1 RP11-34C15.2 0.000000 0.000000 +198 chr10 + 4557144 4557249 ENST00000384396.1 1 106 ENSG00000207124.1 RNU6-163P 0.000000 0.000000 +199 chr10 - 4621911 4720444 MSTRG.40.1 3 2062 MSTRG.40 . 3.346722 5.024745 +200 chr10 - 4692377 4720444 ENST00000430998.2 4 1576 MSTRG.40 LINC00704 7.810430 11.726525 +201 chr10 - 4693295 4699117 ENST00000443994.1 3 543 MSTRG.40 LINC00704 1.211457 1.818873 +202 chr10 - 4693353 4720444 ENST00000449712.1 5 823 MSTRG.40 LINC00704 0.000000 0.000000 +203 chr10 + 4697619 4704611 ENST00000417883.2 3 1745 MSTRG.41 LINC00705 0.000000 0.000000 +204 chr10 - 4728501 4729798 MSTRG.42.1 3 423 MSTRG.42 . 1.004728 1.508492 +205 chr10 - 4787905 4809844 MSTRG.43.1 3 4588 MSTRG.43 . 1.152806 1.730815 +206 chr10 - 4787905 4823145 MSTRG.43.2 3 3442 MSTRG.43 . 3.505030 5.262428 +207 chr10 - 4788110 4809844 MSTRG.43.4 3 2522 MSTRG.43 . 0.000000 0.000000 +208 chr10 - 4788110 4823145 MSTRG.43.3 3 1354 MSTRG.43 . 0.000000 0.000000 +209 chr10 - 4790140 4809844 MSTRG.43.5 2 3691 MSTRG.43 . 0.000000 0.000000 +210 chr10 - 4799235 4809844 MSTRG.43.6 2 3857 MSTRG.43 . 3.002345 4.507700 +211 chr10 + 4828821 4879775 ENST00000533295.1 6 754 MSTRG.44 AKR1E2 0.000000 0.000000 +212 chr10 + 4828901 4882018 ENST00000462718.3 6 693 MSTRG.44 AKR1E2 0.000000 0.000000 +213 chr10 + 4868330 4890575 MSTRG.44.3 7 2727 MSTRG.44 . 2.036853 3.058117 +214 chr10 + 4868359 4883976 MSTRG.44.4 6 3318 MSTRG.44 . 1.515843 2.275876 +215 chr10 + 4868369 4890575 ENST00000474119.1 10 1947 MSTRG.44 AKR1E2 0.000000 0.000000 +216 chr10 + 4868426 4890575 ENST00000463345.1 10 1976 MSTRG.44 AKR1E2 6.072341 9.116971 +217 chr10 + 4868430 4889491 MSTRG.44.7 7 861 MSTRG.44 . 0.000000 0.000000 +218 chr10 + 4868446 4890575 ENST00000298375.7 10 1887 MSTRG.44 AKR1E2 4.518377 6.783860 +219 chr10 + 4868447 4888733 ENST00000525281.1 6 1383 MSTRG.44 AKR1E2 0.000000 0.000000 +220 chr10 + 4868478 4879773 ENST00000525627.1 3 334 MSTRG.44 AKR1E2 0.000000 0.000000 +221 chr10 + 4868488 4888733 MSTRG.44.16 9 3214 MSTRG.44 . 0.000000 0.000000 +222 chr10 + 4868488 4889491 ENST00000532248.1 7 847 MSTRG.44 AKR1E2 0.000000 0.000000 +223 chr10 + 4868488 4889491 MSTRG.44.11 8 1894 MSTRG.44 . 0.000000 0.000000 +224 chr10 + 4868488 4890575 ENST00000334019.4 8 1674 MSTRG.44 AKR1E2 1.177081 1.767261 +225 chr10 + 4868488 4890575 ENST00000345253.5 7 1551 MSTRG.44 AKR1E2 0.000000 0.000000 +226 chr10 + 4868488 4890575 MSTRG.44.12 8 2029 MSTRG.44 . 2.283445 3.428349 +227 chr10 + 4868488 4890575 MSTRG.44.13 10 1897 MSTRG.44 . 0.000000 0.000000 +228 chr10 + 4868488 4995278 MSTRG.44.14 15 2744 MSTRG.44 . 1.544577 2.319017 +229 chr10 + 4868488 4995278 MSTRG.44.17 14 1627 MSTRG.44 . 1.008548 1.514227 +230 chr10 + 4868488 5025475 MSTRG.44.15 20 9882 MSTRG.44 . 3.388950 5.088146 +231 chr10 + 4875547 4888733 ENST00000441590.1 5 1218 MSTRG.44 AKR1E2 0.000000 0.000000 +232 chr10 + 4875592 4884049 ENST00000525572.1 5 506 MSTRG.44 AKR1E2 0.000000 0.000000 +233 chr10 + 4881976 4889679 ENST00000487985.1 4 523 MSTRG.44 AKR1E2 0.000000 0.000000 +234 chr10 - 4914093 4934167 ENST00000432950.1 9 983 MSTRG.45 AKR1C6P 0.000000 0.000000 +235 chr10 - 4927673 4934167 ENST00000281339.5 5 495 MSTRG.45 AKR1C6P 0.000000 0.000000 +236 chr10 + 4934796 5025475 ENST00000434459.2 14 7354 MSTRG.44 AKR1C1 0.000000 0.000000 +237 chr10 - 5004628 5004760 ENST00000459095.1 1 133 MSTRG.46 U8 0.000000 0.000000 +238 chr10 + 5005445 5025475 ENST00000380872.4 9 6705 MSTRG.44 AKR1C1 1.448777 2.175184 +239 chr10 + 5005445 5025475 ENST00000477661.1 8 7970 MSTRG.44 AKR1C1 0.000000 0.000000 +240 chr10 + 5005641 5014941 ENST00000442997.1 7 746 MSTRG.44 AKR1C1 1.617256 2.428137 +241 chr10 + 5005981 5012133 ENST00000380859.1 6 858 MSTRG.44 AKR1C1 0.000000 0.000000 +242 chr10 + 5007683 5010500 ENST00000476100.1 2 1973 MSTRG.44 AKR1C1 0.000000 0.000000 +243 chr10 - 5029967 5046215 ENST00000380753.4 9 3381 MSTRG.47 AKR1C2 2.652925 3.983083 +244 chr10 - 5029967 5060223 MSTRG.47.1 12 3914 MSTRG.47 . 0.000000 0.000000 +245 chr10 - 5030125 5060223 MSTRG.47.3 9 3083 MSTRG.47 . 0.000000 0.000000 +246 chr10 - 5031626 5046114 ENST00000421196.3 8 1543 MSTRG.47 AKR1C2 0.000000 0.000000 +247 chr10 - 5031966 5060223 ENST00000407674.1 11 1605 MSTRG.47 AKR1C2 0.000000 0.000000 +248 chr10 - 5031981 5046215 ENST00000460124.1 8 2639 MSTRG.47 AKR1C2 0.000000 0.000000 +249 chr10 + 5037680 5039586 ENST00000451575.2 3 445 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +250 chr10 - 5038026 5060223 ENST00000604507.1 7 821 MSTRG.47 AKR1C2 0.000000 0.000000 +251 chr10 + 5038074 5039586 ENST00000440414.1 3 316 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +252 chr10 - 5042103 5046114 ENST00000455190.1 4 1006 MSTRG.47 AKR1C2 0.000000 0.000000 +253 chr10 - 5042495 5046114 ENST00000604184.1 4 614 MSTRG.47 AKR1C2 0.000000 0.000000 +254 chr10 + 5046902 5047034 ENST00000459141.1 1 133 MSTRG.49 U8 0.000000 0.000000 +255 chr10 - 5048187 5060223 ENST00000604428.1 4 600 MSTRG.47 AKR1C2 0.000000 0.000000 +256 chr10 - 5048654 5060223 ENST00000604711.1 4 673 MSTRG.47 AKR1C2 0.000000 0.000000 +257 chr10 - 5052655 5058084 ENST00000603073.1 3 579 MSTRG.47 AKR1C2 0.000000 0.000000 +258 chr10 - 5055499 5057426 ENST00000604439.1 2 646 MSTRG.47 AKR1C2 0.000000 0.000000 +259 chr10 + 5077263 5149878 MSTRG.50.1 11 1895 MSTRG.50 . 178.147217 267.468994 +260 chr10 + 5077263 5149878 MSTRG.50.2 10 1725 MSTRG.50 . 55.041931 82.639572 +261 chr10 + 5077263 5149878 MSTRG.50.3 10 1739 MSTRG.50 . 31.182974 46.817902 +262 chr10 + 5077546 5144402 ENST00000605781.1 6 859 MSTRG.50 AKR1C3 14.769787 22.175257 +263 chr10 + 5077546 5149878 MSTRG.50.4 10 1412 MSTRG.50 . 78.048599 117.181633 +264 chr10 + 5077549 5139742 ENST00000470862.2 6 1013 MSTRG.50 AKR1C3 0.000000 0.000000 +265 chr10 + 5077550 5139742 ENST00000480822.1 5 808 MSTRG.50 AKR1C3 2.846815 4.274189 +266 chr10 - 5090055 5090173 ENST00000515931.1 1 119 MSTRG.51 U8 0.000000 0.000000 +267 chr10 + 5090981 5141641 ENST00000602997.1 6 671 MSTRG.50 AKR1C3 3.584735 5.382096 +268 chr10 + 5091004 5093862 ENST00000451627.1 2 125 MSTRG.50 RP11-499O7.4 0.000000 0.000000 +269 chr10 + 5119830 5149878 ENST00000605149.1 9 1411 MSTRG.50 AKR1C3 36.351387 54.577721 +270 chr10 + 5119973 5149878 ENST00000439082.2 9 1268 MSTRG.50 AKR1C3 1.498330 2.249582 +271 chr10 - 5135600 5135735 ENST00000459536.1 1 136 MSTRG.52 U8 0.000000 0.000000 +272 chr10 + 5135985 5149878 ENST00000380554.3 9 1807 MSTRG.50 AKR1C3 162.986038 244.706100 +273 chr10 + 5136606 5140368 ENST00000480697.2 3 1026 MSTRG.50 AKR1C3 3.030812 4.550440 +274 chr10 + 5136610 5142085 ENST00000605322.1 3 846 MSTRG.50 AKR1C3 9.367517 14.064325 +275 chr10 + 5138337 5139742 ENST00000603312.1 2 550 MSTRG.50 AKR1C3 5.441215 8.169403 +276 chr10 + 5147467 5149878 ENST00000603484.1 2 629 MSTRG.50 AKR1C3 2.016670 3.027814 +277 chr10 + 5152190 5156102 MSTRG.53.1 1 3913 MSTRG.53 . 0.000000 0.000000 +278 chr10 - 5164279 5177418 ENST00000427165.1 5 609 MSTRG.54 AKR1C5P 0.000000 0.000000 +279 chr10 - 5164295 5166124 MSTRG.54.2 3 1240 MSTRG.54 . 1.770161 2.657707 +280 chr10 - 5179314 5227150 MSTRG.55.1 10 1363 MSTRG.55 . 2.486747 3.733585 +281 chr10 - 5196335 5202333 ENST00000473890.1 5 645 MSTRG.55 AKR1CL1 0.000000 0.000000 +282 chr10 - 5196655 5202333 ENST00000465430.1 3 1716 MSTRG.55 AKR1CL1 0.000000 0.000000 +283 chr10 - 5202775 5227150 ENST00000472691.1 5 595 MSTRG.55 AKR1CL1 0.000000 0.000000 +284 chr10 - 5202775 5227150 ENST00000488756.1 4 539 MSTRG.55 AKR1CL1 0.000000 0.000000 +285 chr10 - 5202775 5326531 MSTRG.55.4 16 3182 MSTRG.55 . 0.000000 0.000000 +286 chr10 - 5203694 5227150 ENST00000334314.3 4 498 MSTRG.55 AKR1CL1 0.000000 0.000000 +287 chr10 - 5226975 5244449 ENST00000445191.1 2 81 MSTRG.55 AKR1CL1 0.000000 0.000000 +288 chr10 + 5237425 5238914 ENST00000469875.2 2 837 MSTRG.56 AKR1C4 0.000000 0.000000 +289 chr10 + 5237426 5260912 ENST00000380448.1 11 1414 MSTRG.56 AKR1C4 0.000000 0.000000 +290 chr10 - 5237847 5237936 ENST00000516100.1 1 90 MSTRG.57 U8 0.000000 0.000000 +291 chr10 + 5238798 5260912 ENST00000263126.1 9 1194 MSTRG.56 AKR1C4 0.000000 0.000000 +292 chr10 + 5249132 5249705 ENST00000441452.1 1 574 MSTRG.58 RP11-445P17.6 0.000000 0.000000 +293 chr10 - 5257183 5333847 MSTRG.55.9 13 4052 MSTRG.55 . 0.000000 0.000000 +294 chr10 + 5276321 5305371 ENST00000428920.2 2 680 MSTRG.59 RP11-445P17.3 0.000000 0.000000 +295 chr10 - 5305897 5333847 MSTRG.55.10 11 2734 MSTRG.55 . 1.673779 2.513000 +296 chr10 - 5305973 5333847 MSTRG.55.11 10 2491 MSTRG.55 . 2.508297 3.765940 +297 chr10 - 5306256 5326531 MSTRG.55.12 8 1358 MSTRG.55 . 0.000000 0.000000 +298 chr10 - 5307136 5326531 MSTRG.55.13 6 2330 MSTRG.55 . 1.639497 2.461530 +299 chr10 - 5307996 5313416 ENST00000449457.1 2 909 MSTRG.55 RP11-445P17.8 0.000000 0.000000 +300 chr10 - 5317136 5330433 ENST00000305623.8 8 895 MSTRG.55 AKR1C7P 0.000000 0.000000 +301 chr10 - 5317169 5327975 ENST00000432689.2 6 685 MSTRG.55 AKR1C7P 0.000000 0.000000 +302 chr10 - 5319027 5326531 MSTRG.55.17 4 1603 MSTRG.55 . 4.989338 7.490958 +303 chr10 - 5346394 5346828 ENST00000451325.1 1 435 ENSG00000223987.1 RP11-445P17.5 0.000000 0.000000 +304 chr10 + 5406972 5416169 ENST00000380433.3 2 714 ENSG00000178473.5 UCN3 0.000000 0.000000 +305 chr10 - 5435061 5446793 ENST00000380419.3 4 1798 MSTRG.60 TUBAL3 0.000000 0.000000 +306 chr10 - 5435232 5446793 ENST00000479328.1 4 1507 MSTRG.60 TUBAL3 0.000000 0.000000 +307 chr10 + 5454514 5500426 ENST00000355029.4 12 3402 MSTRG.61 NET1 81.261208 122.005020 +308 chr10 + 5455752 5500426 ENST00000542715.1 12 3184 MSTRG.61 NET1 0.000000 0.000000 +309 chr10 + 5488572 5494883 ENST00000486354.1 4 622 MSTRG.61 NET1 0.000000 0.000000 +310 chr10 + 5488572 5496485 ENST00000449083.1 4 637 MSTRG.61 NET1 0.000000 0.000000 +311 chr10 + 5488574 5500426 ENST00000380359.3 10 3253 MSTRG.61 NET1 51.694874 77.614326 +312 chr10 + 5494382 5495116 ENST00000465087.1 2 403 MSTRG.61 NET1 0.000000 0.000000 +313 chr10 + 5496344 5498493 ENST00000484741.1 3 757 MSTRG.61 NET1 0.000000 0.000000 +314 chr10 - 5540658 5541533 ENST00000380332.3 1 876 ENSG00000178372.6 CALML5 0.000000 0.000000 +315 chr10 - 5556207 5565140 ENST00000543008.1 2 4531 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +316 chr10 - 5559244 5568209 ENST00000542093.1 3 560 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +317 chr10 - 5559332 5568204 ENST00000545372.1 4 579 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +318 chr10 + 5566924 5568225 ENST00000315238.1 1 1302 ENSG00000178363.3 CALML3 0.000000 0.000000 +319 chr10 - 5566939 5567705 ENST00000442008.2 2 595 ENSG00000256462.1 RP11-116G8.5 0.000000 0.000000 +320 chr10 - 5592096 5592862 MSTRG.62.1 2 505 MSTRG.62 . 1.285149 1.929514 +321 chr10 - 5598987 5601960 MSTRG.63.1 3 464 MSTRG.63 . 1.174569 1.763490 +322 chr10 - 5636951 5638081 MSTRG.64.1 2 738 MSTRG.64 . 5.606099 8.416959 +323 chr10 - 5636954 5638081 ENST00000478294.1 2 697 MSTRG.64 RP13-463N16.6 13.724101 20.605270 +324 chr10 - 5650438 5652756 ENST00000425246.1 5 613 ENSG00000231483.1 RP11-336A10.5 0.000000 0.000000 +325 chr10 - 5658825 5660124 ENST00000427341.1 3 657 ENSG00000228951.1 RP11-336A10.4 0.000000 0.000000 +326 chr10 + 5666894 5667089 ENST00000441526.1 1 196 ENSG00000228685.1 RP11-336A10.7 0.000000 0.000000 +327 chr10 + 5673426 5673716 ENST00000495609.2 1 291 ENSG00000240577.2 RN7SL445P 0.000000 0.000000 +328 chr10 - 5680830 5683924 ENST00000493897.1 3 832 MSTRG.65 ASB13 1.634656 2.454261 +329 chr10 - 5680831 5708558 ENST00000357700.6 6 2716 MSTRG.65 ASB13 53.947643 80.996620 +330 chr10 - 5680831 5708558 ENST00000459912.1 7 2797 MSTRG.65 ASB13 2.082179 3.126169 +331 chr10 - 5680831 5708558 ENST00000479033.1 5 2565 MSTRG.65 ASB13 2.235693 3.356654 +332 chr10 - 5690935 5693531 ENST00000482921.1 2 489 MSTRG.65 ASB13 0.000000 0.000000 +333 chr10 + 5726801 5806473 ENST00000328090.5 21 9396 MSTRG.66 FAM208B 15.827752 23.763678 +334 chr10 + 5726801 5806473 MSTRG.66.1 24 9749 MSTRG.66 . 32.295082 48.487614 +335 chr10 + 5726801 5806473 MSTRG.66.2 23 9657 MSTRG.66 . 35.975483 54.013344 +336 chr10 + 5726801 5806473 MSTRG.66.3 21 9226 MSTRG.66 . 31.943901 47.960354 +337 chr10 + 5726801 5806473 MSTRG.66.4 24 9644 MSTRG.66 . 0.000000 0.000000 +338 chr10 + 5726801 5806473 MSTRG.66.5 20 9134 MSTRG.66 . 36.548588 54.873798 +339 chr10 + 5726801 5806473 MSTRG.66.6 22 9511 MSTRG.66 . 36.452915 54.730152 +340 chr10 + 5726801 5806473 MSTRG.66.7 23 9498 MSTRG.66 . 0.000000 0.000000 +341 chr10 + 5726905 5754502 ENST00000477043.1 3 514 MSTRG.66 FAM208B 0.000000 0.000000 +342 chr10 + 5726905 5756170 ENST00000473789.1 4 537 MSTRG.66 FAM208B 0.000000 0.000000 +343 chr10 + 5726911 5762631 ENST00000496681.1 4 522 MSTRG.66 FAM208B 0.000000 0.000000 +344 chr10 + 5726928 5762631 ENST00000480839.2 5 597 MSTRG.66 FAM208B 0.000000 0.000000 +345 chr10 + 5734779 5754881 ENST00000532424.1 4 479 MSTRG.66 FAM208B 0.000000 0.000000 +346 chr10 + 5741411 5751626 ENST00000482419.1 2 424 MSTRG.66 FAM208B 1.432831 2.151243 +347 chr10 + 5741456 5756170 ENST00000463468.1 4 560 MSTRG.66 FAM208B 0.000000 0.000000 +348 chr10 + 5751589 5756537 ENST00000527124.1 3 574 MSTRG.66 FAM208B 8.311824 12.479315 +349 chr10 - 5754137 5786030 ENST00000411512.2 2 736 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +350 chr10 - 5754383 5756386 ENST00000596567.1 2 945 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +351 chr10 + 5768789 5773166 ENST00000532080.1 3 912 MSTRG.66 FAM208B 0.000000 0.000000 +352 chr10 + 5772625 5782460 ENST00000380270.3 2 1422 MSTRG.66 FAM208B 0.000000 0.000000 +353 chr10 + 5800892 5803764 ENST00000487196.1 2 576 MSTRG.66 FAM208B 0.000000 0.000000 +354 chr10 + 5802803 5806473 ENST00000459693.1 2 2611 MSTRG.66 FAM208B 1.666993 2.502812 +355 chr10 - 5807186 5855512 ENST00000380191.4 11 2412 MSTRG.68 GDI2 2094.187012 3144.197998 +356 chr10 - 5807192 5811352 ENST00000479928.1 3 2499 MSTRG.68 GDI2 8.486591 12.741710 +357 chr10 - 5807812 5827944 ENST00000447751.1 6 893 MSTRG.68 GDI2 86.040565 129.180710 +358 chr10 - 5807884 5855512 ENST00000380132.4 12 1797 MSTRG.68 GDI2 91.640198 137.587967 +359 chr10 - 5807917 5855512 ENST00000380181.3 10 1546 MSTRG.68 GDI2 144.331970 216.699020 +360 chr10 - 5815805 5855512 ENST00000456041.1 7 1080 MSTRG.68 GDI2 9.615858 14.437182 +361 chr10 + 5818034 5818821 ENST00000603087.1 1 788 MSTRG.69 NRBF2P5 0.000000 0.000000 +362 chr10 - 5827829 5855512 ENST00000418688.1 4 756 MSTRG.68 GDI2 1.393477 2.092157 +363 chr10 - 5827945 5856292 ENST00000608581.1 5 634 MSTRG.68 GDI2 16.027639 24.063787 +364 chr10 - 5827969 5884095 ENST00000380127.1 7 584 MSTRG.68 GDI2 0.000000 0.000000 +365 chr10 - 5836871 5855512 ENST00000609712.1 5 739 MSTRG.68 GDI2 6.372757 9.568013 +366 chr10 + 5855610 5858572 MSTRG.70.1 1 2963 MSTRG.70 . 3.745290 5.623153 +367 chr10 + 5855948 5858572 ENST00000608273.1 2 2444 MSTRG.70 RP11-318E3.9 0.000000 0.000000 +368 chr10 - 5902878 5931954 MSTRG.71.1 8 3707 MSTRG.71 . 15.704882 23.579203 +369 chr10 - 5902878 5931954 MSTRG.71.2 9 3232 MSTRG.71 . 0.000000 0.000000 +370 chr10 - 5902878 5931954 MSTRG.71.3 9 3684 MSTRG.71 . 1.325257 1.989732 +371 chr10 - 5903580 5931954 ENST00000380094.5 8 2831 MSTRG.71 ANKRD16 6.322493 9.492547 +372 chr10 - 5903768 5904654 ENST00000430852.1 2 586 MSTRG.71 RP11-318E3.4 0.000000 0.000000 +373 chr10 - 5918136 5931954 MSTRG.71.6 8 2285 MSTRG.71 . 4.871504 7.314043 +374 chr10 - 5920050 5931954 ENST00000380092.4 7 1766 MSTRG.71 ANKRD16 2.827475 4.245152 +375 chr10 - 5920085 5931954 ENST00000191063.8 6 1652 MSTRG.71 ANKRD16 6.228397 9.351273 +376 chr10 - 5924666 5930030 ENST00000492368.1 4 838 MSTRG.71 ANKRD16 2.083036 3.127456 +377 chr10 + 5931535 5979556 ENST00000397269.3 22 3665 MSTRG.72 FBXO18 0.000000 0.000000 +378 chr10 + 5932194 5979556 ENST00000362091.4 21 3560 MSTRG.72 FBXO18 67.939606 102.004059 +379 chr10 + 5932211 5953091 ENST00000470089.1 5 1153 MSTRG.72 FBXO18 2.349391 3.527360 +380 chr10 + 5932211 5979168 MSTRG.72.3 22 3206 MSTRG.72 . 16.667360 25.024260 +381 chr10 + 5932243 5948595 ENST00000462507.1 4 917 MSTRG.72 FBXO18 0.000000 0.000000 +382 chr10 + 5932243 5969504 MSTRG.72.7 20 2993 MSTRG.72 . 4.733488 7.106826 +383 chr10 + 5932243 5979556 MSTRG.72.5 20 3355 MSTRG.72 . 51.900688 77.923332 +384 chr10 + 5932243 5979556 MSTRG.72.6 23 4178 MSTRG.72 . 74.655098 112.086647 +385 chr10 + 5933788 5969504 MSTRG.72.9 19 8474 MSTRG.72 . 31.182348 46.816963 +386 chr10 + 5936349 5979556 ENST00000379999.5 22 3702 MSTRG.72 FBXO18 38.050041 57.128071 +387 chr10 + 5945129 5951257 ENST00000469009.1 5 943 MSTRG.72 FBXO18 1.849998 2.777574 +388 chr10 + 5948469 5951441 ENST00000494526.1 3 578 MSTRG.72 FBXO18 1.508530 2.264897 +389 chr10 + 5956141 5957907 ENST00000460453.1 2 634 MSTRG.72 FBXO18 9.760585 14.654474 +390 chr10 + 5959025 5959639 ENST00000489042.1 2 533 MSTRG.72 FBXO18 1.995825 2.996518 +391 chr10 + 5963309 5966471 ENST00000475867.1 3 1022 MSTRG.72 FBXO18 2.588534 3.886407 +392 chr10 + 5963317 5979168 ENST00000461504.1 9 912 MSTRG.72 FBXO18 4.790583 7.192549 +393 chr10 + 5965534 5969504 ENST00000485290.1 4 557 MSTRG.72 FBXO18 0.000000 0.000000 +394 chr10 + 5967227 5969504 ENST00000496013.1 2 336 MSTRG.72 FBXO18 2.775922 4.167750 +395 chr10 + 5967374 5970636 ENST00000479433.1 3 527 MSTRG.72 FBXO18 2.182142 3.276253 +396 chr10 + 5967374 5971829 ENST00000470353.1 3 681 MSTRG.72 FBXO18 0.000000 0.000000 +397 chr10 - 5976233 5987876 ENST00000397264.4 2 3499 MSTRG.73 RP11-536K7.3 1.191468 1.788862 +398 chr10 - 5977257 5987876 MSTRG.73.2 2 615 MSTRG.73 . 0.000000 0.000000 +399 chr10 + 5978596 5979556 ENST00000481029.1 2 486 MSTRG.72 FBXO18 0.000000 0.000000 +400 chr10 - 5985453 5987876 ENST00000448685.1 2 685 MSTRG.73 RP11-536K7.3 2.183839 3.278801 +401 chr10 - 5985467 5987876 ENST00000454321.1 2 545 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +402 chr10 - 5990855 6002530 ENST00000435171.2 4 659 MSTRG.74 IL15RA 2.045332 3.070847 +403 chr10 - 5990898 6010891 MSTRG.74.2 6 5050 MSTRG.74 . 5.933389 8.908350 +404 chr10 - 5990898 6010891 MSTRG.74.3 7 5029 MSTRG.74 . 3.023180 4.538981 +405 chr10 - 5990938 6019177 MSTRG.74.5 6 5123 MSTRG.74 . 0.000000 0.000000 +406 chr10 - 5990938 6020150 MSTRG.74.4 8 5520 MSTRG.74 . 0.000000 0.000000 +407 chr10 - 5994142 6020150 MSTRG.74.6 7 2163 MSTRG.74 . 22.804487 34.238503 +408 chr10 - 5994334 6019739 ENST00000379977.3 7 1812 MSTRG.74 IL15RA 5.024849 7.544273 +409 chr10 - 5994335 6019739 ENST00000397248.2 7 1811 MSTRG.74 IL15RA 5.000984 7.508443 +410 chr10 - 5994335 6019739 ENST00000397251.3 6 1616 MSTRG.74 IL15RA 0.000000 0.000000 +411 chr10 - 5994344 6020150 ENST00000525219.2 7 1841 MSTRG.74 IL15RA 4.402999 6.610632 +412 chr10 - 5994349 6020150 ENST00000534292.1 7 1836 MSTRG.74 IL15RA 3.668354 5.507641 +413 chr10 - 5994356 6020150 ENST00000379972.2 6 1631 MSTRG.74 IL15RA 1.081722 1.624090 +414 chr10 - 5994356 6020150 ENST00000532948.1 6 1730 MSTRG.74 IL15RA 2.933051 4.403663 +415 chr10 - 5994756 6019739 ENST00000528354.1 6 1291 MSTRG.74 IL15RA 0.000000 0.000000 +416 chr10 - 5994784 6005801 ENST00000447291.1 5 912 MSTRG.74 IL15RA 0.000000 0.000000 +417 chr10 - 5994861 6020150 ENST00000379974.1 5 1030 MSTRG.74 IL15RA 1.913288 2.872597 +418 chr10 - 5995008 6008302 ENST00000532039.1 6 679 MSTRG.74 IL15RA 0.000000 0.000000 +419 chr10 - 5995014 6019739 ENST00000397250.2 5 838 MSTRG.74 IL15RA 2.134876 3.205288 +420 chr10 - 5995115 6019739 ENST00000379971.1 5 857 MSTRG.74 IL15RA 0.000000 0.000000 +421 chr10 - 5995223 6019739 ENST00000397255.3 7 1043 MSTRG.74 IL15RA 1.152446 1.730275 +422 chr10 - 5995223 6019739 ENST00000530685.1 6 944 MSTRG.74 IL15RA 0.000000 0.000000 +423 chr10 - 5998341 6020150 ENST00000397246.3 7 1180 MSTRG.74 IL15RA 0.000000 0.000000 +424 chr10 - 6001717 6019739 ENST00000429135.2 4 801 MSTRG.74 IL15RA 0.000000 0.000000 +425 chr10 - 6002358 6019177 ENST00000453922.1 4 730 MSTRG.74 IL15RA 0.000000 0.000000 +426 chr10 - 6052652 6104288 ENST00000379959.3 8 3176 ENSG00000134460.11 IL2RA 0.000000 0.000000 +427 chr10 - 6054034 6104272 ENST00000379954.1 7 1562 ENSG00000134460.11 IL2RA 0.000000 0.000000 +428 chr10 - 6054760 6104253 ENST00000256876.6 8 1006 ENSG00000134460.11 IL2RA 0.000000 0.000000 +429 chr10 - 6059017 6059157 ENST00000516113.1 1 141 ENSG00000251922.1 SNORA14 0.000000 0.000000 +430 chr10 - 6061416 6067964 ENST00000447847.1 3 326 ENSG00000134460.11 IL2RA 0.000000 0.000000 +431 chr10 + 6067941 6078390 ENST00000440436.1 3 480 ENSG00000229664.1 RP11-536K7.5 0.000000 0.000000 +432 chr10 - 6113477 6113881 ENST00000397237.2 1 405 ENSG00000214015.3 RP11-414H17.2 0.000000 0.000000 +433 chr10 + 6130950 6159420 ENST00000379888.4 12 3332 MSTRG.75 RBM17 122.783821 184.346771 +434 chr10 + 6130962 6159420 MSTRG.75.2 12 4027 MSTRG.75 . 136.307205 204.650696 +435 chr10 + 6131017 6154324 ENST00000437845.2 7 873 MSTRG.75 RBM17 0.000000 0.000000 +436 chr10 + 6131034 6152090 ENST00000432931.1 7 842 MSTRG.75 RBM17 6.457520 9.695276 +437 chr10 + 6131309 6159420 ENST00000446108.1 12 3751 MSTRG.75 RBM17 8.342314 12.525093 +438 chr10 + 6138873 6152090 ENST00000418631.1 6 860 MSTRG.75 RBM17 2.003664 3.008287 +439 chr10 + 6146909 6148340 ENST00000467214.1 2 389 MSTRG.75 RBM17 16.403645 24.628319 +440 chr10 + 6146934 6154664 ENST00000447032.1 5 916 MSTRG.75 RBM17 35.518501 53.327232 +441 chr10 + 6150451 6154664 ENST00000481147.1 3 889 MSTRG.75 RBM17 18.282387 27.449051 +442 chr10 + 6154665 6159420 ENST00000476706.1 5 2618 MSTRG.75 RBM17 5.360858 8.048756 +443 chr10 + 6155326 6159420 ENST00000465906.1 3 2537 MSTRG.75 RBM17 12.964934 19.465464 +444 chr10 + 6155870 6159420 ENST00000467080.1 2 2460 MSTRG.75 RBM17 1.656209 2.486621 +445 chr10 + 6156110 6159420 ENST00000496762.1 2 3170 MSTRG.75 RBM17 4.258085 6.393059 +446 chr10 + 6171977 6172984 MSTRG.76.1 2 758 MSTRG.76 . 4.083114 6.130360 +447 chr10 + 6186881 6277495 ENST00000536985.1 12 3923 MSTRG.77 PFKFB3 1.451944 2.179939 +448 chr10 + 6186897 6277495 ENST00000379789.4 15 4157 MSTRG.77 PFKFB3 96.973747 145.595718 +449 chr10 + 6188279 6277495 ENST00000540253.1 15 4258 MSTRG.77 PFKFB3 0.000000 0.000000 +450 chr10 + 6191586 6191903 ENST00000364711.1 1 318 MSTRG.78 RN7SKP78 0.000000 0.000000 +451 chr10 + 6194159 6194240 ENST00000577482.1 1 82 MSTRG.79 MIR3155A 0.000000 0.000000 +452 chr10 - 6239575 6244656 ENST00000427630.1 2 438 MSTRG.80 RP11-414H17.5 0.000000 0.000000 +453 chr10 + 6244829 6270258 ENST00000317350.4 15 2010 MSTRG.77 PFKFB3 0.000000 0.000000 +454 chr10 + 6244829 6270258 ENST00000461744.1 16 2098 MSTRG.77 PFKFB3 0.000000 0.000000 +455 chr10 + 6244829 6277495 ENST00000379785.1 17 4623 MSTRG.77 PFKFB3 0.000000 0.000000 +456 chr10 + 6244829 6277495 ENST00000467491.1 18 4711 MSTRG.77 PFKFB3 0.000000 0.000000 +457 chr10 + 6244829 6277495 ENST00000477914.1 16 4636 MSTRG.77 PFKFB3 9.786742 14.693747 +458 chr10 + 6244829 6277495 ENST00000490474.1 17 4659 MSTRG.77 PFKFB3 7.727974 11.602727 +459 chr10 + 6244840 6273277 ENST00000379782.3 16 1974 MSTRG.77 PFKFB3 0.000000 0.000000 +460 chr10 + 6244863 6277495 ENST00000360521.2 16 4537 MSTRG.77 PFKFB3 64.554405 96.921539 +461 chr10 + 6244894 6277495 ENST00000379775.4 15 4483 MSTRG.77 PFKFB3 351.873413 528.300293 +462 chr10 + 6263367 6277495 ENST00000450232.1 5 3020 MSTRG.77 PFKFB3 21.949953 32.955509 +463 chr10 + 6264671 6268410 ENST00000487989.1 4 661 MSTRG.77 PFKFB3 4.264553 6.402771 +464 chr10 + 6266129 6277495 ENST00000414237.1 5 2955 MSTRG.77 PFKFB3 1.472747 2.211172 +465 chr10 + 6266129 6277495 ENST00000441697.1 2 2686 MSTRG.77 PFKFB3 4.255954 6.389860 +466 chr10 + 6266129 6277495 ENST00000475881.1 4 2978 MSTRG.77 PFKFB3 1.708752 2.565508 +467 chr10 - 6287694 6287794 ENST00000459607.1 1 101 ENSG00000238366.1 Y_RNA 0.000000 0.000000 +468 chr10 + 6319650 6377944 ENST00000399868.2 7 3086 MSTRG.81 RP11-563J2.2 0.000000 0.000000 +469 chr10 - 6335063 6336647 ENST00000440192.1 4 890 MSTRG.82 SDCBPP1 0.000000 0.000000 +470 chr10 + 6392278 6394723 ENST00000391437.1 1 2446 ENSG00000212743.1 DKFZP667F0711 0.000000 0.000000 +471 chr10 - 6469105 6622263 ENST00000263125.5 18 3285 MSTRG.83 PRKCQ 0.000000 0.000000 +472 chr10 - 6469134 6622263 ENST00000397176.2 17 3067 MSTRG.83 PRKCQ 0.000000 0.000000 +473 chr10 - 6469983 6622263 ENST00000539722.1 17 2346 MSTRG.83 PRKCQ 0.000000 0.000000 +474 chr10 + 6622381 6626261 ENST00000445427.1 2 1133 MSTRG.84 PRKCQ-AS1 2.535779 3.807201 +475 chr10 + 6622387 6626079 ENST00000455810.1 3 1009 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +476 chr10 + 6625638 6627674 ENST00000414894.1 2 398 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +477 chr10 + 6625641 6626261 ENST00000449648.1 2 422 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +478 chr10 + 6625767 6630358 ENST00000607982.1 3 677 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +479 chr10 + 6625767 6633059 ENST00000608526.1 5 666 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +480 chr10 + 6628186 6628882 ENST00000561822.1 1 697 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +481 chr10 + 6649249 6657912 ENST00000609627.1 3 378 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +482 chr10 + 6649283 6657921 ENST00000607996.1 5 531 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +483 chr10 + 6650310 6658414 ENST00000609346.1 4 938 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +484 chr10 + 6650338 6658359 ENST00000608453.1 3 587 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +485 chr10 + 6660678 6667308 ENST00000448835.2 4 500 ENSG00000225948.2 RP11-554I8.1 0.000000 0.000000 +486 chr10 + 6779344 6780988 ENST00000417112.1 2 917 MSTRG.85 RP11-554I8.2 1.310796 1.968020 +487 chr10 - 6816341 6821132 MSTRG.86.1 2 617 MSTRG.86 . 2.055105 3.085521 +488 chr10 + 6821558 6884868 MSTRG.87.1 4 5454 MSTRG.87 . 5.995472 9.001560 +489 chr10 + 6821560 6884868 ENST00000436383.1 5 3070 MSTRG.87 LINC00707 1.056252 1.585850 +490 chr10 - 6867825 6868186 ENST00000451996.1 1 362 MSTRG.88 AL392086.1 0.000000 0.000000 +491 chr10 - 6933419 6962434 ENST00000457632.1 3 299 ENSG00000234248.1 RP11-799O21.2 0.000000 0.000000 +492 chr10 - 7100287 7100507 MSTRG.89.1 1 221 MSTRG.89 . 0.000000 0.000000 +493 chr10 + 7139114 7139637 ENST00000420049.1 2 436 ENSG00000223581.1 RP11-393K12.2 0.000000 0.000000 +494 chr10 + 7196082 7196198 ENST00000604136.1 1 117 ENSG00000270811.1 RP11-393K12.4 0.000000 0.000000 +495 chr10 - 7200586 7451303 ENST00000361972.4 21 7922 MSTRG.90 SFMBT2 0.000000 0.000000 +496 chr10 - 7200586 7452983 MSTRG.90.1 21 7852 MSTRG.90 . 21.558451 32.367710 +497 chr10 - 7200586 7452983 MSTRG.90.2 21 8043 MSTRG.90 . 3.492578 5.243732 +498 chr10 - 7200600 7452983 MSTRG.90.4 21 8049 MSTRG.90 . 0.000000 0.000000 +499 chr10 - 7204249 7453450 ENST00000397167.1 21 4363 MSTRG.90 SFMBT2 0.000000 0.000000 +500 chr10 - 7326144 7453450 ENST00000379713.3 5 2404 MSTRG.90 SFMBT2 0.000000 0.000000 +501 chr10 - 7337068 7337252 ENST00000421389.1 1 185 MSTRG.91 RP5-1092K5.2 0.000000 0.000000 +502 chr10 - 7390104 7450707 ENST00000379711.2 5 692 MSTRG.90 SFMBT2 0.000000 0.000000 +503 chr10 - 7390249 7453450 ENST00000397160.3 5 678 MSTRG.90 SFMBT2 0.000000 0.000000 +504 chr10 - 7487520 7513904 ENST00000420395.1 4 557 ENSG00000232591.1 RP5-1031D4.2 0.000000 0.000000 +505 chr10 - 7528665 7528771 ENST00000384722.1 1 107 ENSG00000207453.1 RNU6-535P 0.000000 0.000000 +506 chr10 + 7575169 7578527 ENST00000414631.1 3 714 ENSG00000230121.1 RP11-385N23.1 0.000000 0.000000 +507 chr10 - 7601232 7708961 ENST00000256861.6 14 6749 MSTRG.92 ITIH5 0.000000 0.000000 +508 chr10 - 7601756 7708961 ENST00000397146.2 12 2194 MSTRG.92 ITIH5 0.000000 0.000000 +509 chr10 - 7604386 7664440 ENST00000298441.6 10 5734 MSTRG.92 ITIH5 0.000000 0.000000 +510 chr10 - 7605045 7708961 ENST00000446830.2 14 2936 MSTRG.92 ITIH5 0.000000 0.000000 +511 chr10 - 7608000 7612363 ENST00000473591.1 3 782 MSTRG.92 ITIH5 0.000000 0.000000 +512 chr10 - 7611125 7618854 ENST00000492668.1 3 1116 MSTRG.92 ITIH5 0.000000 0.000000 +513 chr10 - 7613368 7682818 ENST00000434980.1 9 2727 MSTRG.92 ITIH5 0.000000 0.000000 +514 chr10 - 7613368 7708961 ENST00000397145.2 12 3132 MSTRG.92 ITIH5 0.000000 0.000000 +515 chr10 - 7614735 7620667 ENST00000468389.1 3 1393 MSTRG.92 ITIH5 0.000000 0.000000 +516 chr10 - 7614735 7664440 ENST00000476417.1 6 6945 MSTRG.92 ITIH5 0.000000 0.000000 +517 chr10 - 7618855 7659245 ENST00000461751.1 7 999 MSTRG.92 ITIH5 0.000000 0.000000 +518 chr10 + 7745232 7791483 ENST00000358415.4 21 3193 ENSG00000151655.13 ITIH2 0.000000 0.000000 +519 chr10 + 7745309 7755346 ENST00000473227.1 5 654 ENSG00000151655.13 ITIH2 0.000000 0.000000 +520 chr10 + 7745331 7762864 ENST00000480387.1 6 573 ENSG00000151655.13 ITIH2 0.000000 0.000000 +521 chr10 + 7745343 7763660 ENST00000429820.1 7 767 ENSG00000151655.13 ITIH2 0.000000 0.000000 +522 chr10 + 7745363 7791302 ENST00000379587.4 20 2848 ENSG00000151655.13 ITIH2 0.000000 0.000000 +523 chr10 + 7771828 7774436 ENST00000477751.1 3 591 ENSG00000151655.13 ITIH2 0.000000 0.000000 +524 chr10 - 7792925 7829990 ENST00000379562.4 13 6394 MSTRG.93 KIN 29.968353 44.994278 +525 chr10 - 7795188 7808066 ENST00000498098.1 6 817 MSTRG.93 KIN 0.000000 0.000000 +526 chr10 - 7795188 7829990 MSTRG.93.2 14 3782 MSTRG.93 . 6.451521 9.686269 +527 chr10 - 7795188 7829990 MSTRG.93.3 13 3687 MSTRG.93 . 5.118848 7.685403 +528 chr10 - 7795188 7829990 MSTRG.93.4 13 3684 MSTRG.93 . 2.781408 4.175987 +529 chr10 - 7795276 7829990 ENST00000535925.1 14 1618 MSTRG.93 KIN 2.328037 3.495299 +530 chr10 - 7797777 7808347 ENST00000463666.1 6 699 MSTRG.93 KIN 0.000000 0.000000 +531 chr10 - 7797798 7808347 ENST00000471320.1 5 910 MSTRG.93 KIN 0.000000 0.000000 +532 chr10 - 7801234 7829990 ENST00000543003.1 11 1737 MSTRG.93 KIN 4.894532 7.348617 +533 chr10 - 7803196 7816854 ENST00000460089.1 6 626 MSTRG.93 KIN 0.000000 0.000000 +534 chr10 + 7830092 7849778 ENST00000356708.7 10 1163 MSTRG.94 ATP5C1 507.049500 761.280640 +535 chr10 + 7830110 7849778 ENST00000493053.1 9 1110 MSTRG.94 ATP5C1 50.599995 75.970482 +536 chr10 + 7830122 7838551 ENST00000462760.1 2 573 MSTRG.94 ATP5C1 2.237944 3.360034 +537 chr10 + 7830138 7839009 ENST00000460362.1 3 565 MSTRG.94 ATP5C1 0.000000 0.000000 +538 chr10 + 7830140 7844838 ENST00000541227.1 7 907 MSTRG.94 ATP5C1 10.240479 15.374985 +539 chr10 + 7830140 7849778 ENST00000335698.4 9 1078 MSTRG.94 ATP5C1 1454.129028 2183.219238 +540 chr10 + 7830142 7849778 ENST00000465936.1 4 314 MSTRG.94 ATP5C1 0.000000 0.000000 +541 chr10 + 7830147 7844388 ENST00000460820.2 7 763 MSTRG.94 ATP5C1 0.000000 0.000000 +542 chr10 + 7830173 7841513 ENST00000472202.1 4 782 MSTRG.94 ATP5C1 48.087498 72.198242 +543 chr10 + 7842015 7849778 ENST00000473809.1 6 544 MSTRG.94 ATP5C1 2.710940 4.070187 +544 chr10 + 7844206 7849778 ENST00000480528.1 4 474 MSTRG.94 ATP5C1 0.000000 0.000000 +545 chr10 + 7860467 8058947 ENST00000344293.5 7 5229 MSTRG.95 TAF3 25.491325 38.272499 +546 chr10 + 7860475 8058947 MSTRG.95.2 7 5218 MSTRG.95 . 6.040793 9.069605 +547 chr10 - 7875581 7875920 ENST00000440219.1 1 340 MSTRG.96 RP11-401E9.3 0.000000 0.000000 +548 chr10 - 8092413 8095447 ENST00000355358.1 2 2214 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +549 chr10 - 8092439 8094458 ENST00000420815.1 3 650 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +550 chr10 - 8092439 8094458 ENST00000438755.1 3 675 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +551 chr10 + 8093504 8095047 ENST00000418270.1 3 402 ENSG00000232638.1 RP11-379F12.4 0.000000 0.000000 +552 chr10 - 8094205 8095219 ENST00000417359.1 2 565 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +553 chr10 - 8094206 8095412 ENST00000458727.1 2 820 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +554 chr10 + 8095567 8097859 ENST00000481743.1 2 785 MSTRG.97 GATA3 0.000000 0.000000 +555 chr10 + 8095567 8117161 MSTRG.97.1 6 3054 MSTRG.97 . 0.000000 0.000000 +556 chr10 + 8095593 8117161 MSTRG.97.3 6 3025 MSTRG.97 . 0.000000 0.000000 +557 chr10 + 8096656 8117161 ENST00000379328.3 6 3078 MSTRG.97 GATA3 3.216914 4.829853 +558 chr10 + 8096769 8117161 ENST00000346208.3 6 2962 MSTRG.97 GATA3 1.149676 1.726115 +559 chr10 + 8100362 8117161 ENST00000461472.1 3 2029 MSTRG.97 GATA3 0.000000 0.000000 +560 chr10 + 8203223 8204155 ENST00000451976.1 1 933 ENSG00000225053.1 PRPF38AP1 0.000000 0.000000 +561 chr10 - 8301294 8302767 ENST00000454056.1 2 365 ENSG00000232170.1 LINC00708 0.000000 0.000000 +562 chr10 - 8301294 8310268 ENST00000428165.1 5 916 ENSG00000232170.1 LINC00708 0.000000 0.000000 +563 chr10 + 8340860 8343630 ENST00000413941.1 2 901 ENSG00000226861.1 RP5-1119O21.2 0.000000 0.000000 +564 chr10 + 8442823 8503826 ENST00000413286.1 4 430 ENSG00000226990.1 RP11-543F8.2 0.000000 0.000000 +565 chr10 + 8514682 8514915 ENST00000603398.1 1 234 ENSG00000271251.1 RP11-543F8.3 0.000000 0.000000 +566 chr10 - 8555650 8557069 ENST00000451609.1 1 1420 ENSG00000213771.3 KRT8P37 0.000000 0.000000 +567 chr10 + 8661896 8662571 ENST00000425516.1 1 676 ENSG00000236420.1 CHCHD3P1 0.000000 0.000000 +568 chr10 - 8698679 8698794 ENST00000391203.1 1 116 ENSG00000212505.1 RNA5SP299 0.000000 0.000000 +569 chr10 + 8765973 8766251 ENST00000605632.1 1 279 ENSG00000270234.1 RP11-575N15.1 0.000000 0.000000 +570 chr10 + 8939952 8956559 ENST00000447297.1 4 366 ENSG00000234752.1 RP11-428L9.1 0.000000 0.000000 +571 chr10 + 9012088 9015431 ENST00000456526.1 2 677 ENSG00000223808.1 RP11-428L9.2 0.000000 0.000000 +572 chr10 + 9317796 9329020 ENST00000458168.1 2 494 ENSG00000230014.1 LINC00709 0.000000 0.000000 +573 chr10 - 9763926 9766379 ENST00000450068.1 1 2454 ENSG00000235838.1 HSP90AB7P 0.000000 0.000000 +574 chr10 - 9800746 9801200 ENST00000419836.1 2 344 ENSG00000228636.1 RP5-1051H14.2 0.000000 0.000000 +575 chr10 + 10100685 10105465 ENST00000429539.1 4 575 ENSG00000224788.1 RP5-933E2.1 0.000000 0.000000 +576 chr10 + 10216193 10216528 ENST00000535261.1 1 336 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +577 chr10 + 10216193 10216540 ENST00000439303.1 1 348 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +578 chr10 + 10274574 10274675 ENST00000363979.1 1 102 ENSG00000200849.1 Y_RNA 0.000000 0.000000 +579 chr10 - 10299132 10299429 ENST00000606426.1 1 298 ENSG00000272436.1 CUX2P1 0.000000 0.000000 +580 chr10 - 10407143 10408450 ENST00000455871.1 2 335 ENSG00000234306.1 RP11-271F18.1 0.000000 0.000000 +581 chr10 - 10461501 10504312 ENST00000602311.1 4 505 ENSG00000270111.1 RP11-271F18.4 0.000000 0.000000 +582 chr10 - 10818186 10818624 ENST00000448495.1 1 439 ENSG00000228997.1 RP1-186E20.1 0.000000 0.000000 +583 chr10 - 10826400 10836959 ENST00000415590.2 4 656 MSTRG.98 SFTA1P 0.000000 0.000000 +584 chr10 - 10826400 10836959 ENST00000602763.1 4 636 MSTRG.98 SFTA1P 2.122738 3.187064 +585 chr10 - 10826401 10836959 ENST00000434919.2 3 481 MSTRG.98 SFTA1P 0.000000 0.000000 +586 chr10 - 10826402 10836959 ENST00000446372.2 4 775 MSTRG.98 SFTA1P 2.252263 3.381532 +587 chr10 - 10826413 10836959 MSTRG.98.5 4 784 MSTRG.98 . 3.406839 5.115004 +588 chr10 - 10969021 10988765 ENST00000600516.1 6 659 ENSG00000229240.3 LINC00710 0.000000 0.000000 +589 chr10 - 10976487 10994058 ENST00000428520.2 6 1460 ENSG00000229240.3 LINC00710 0.000000 0.000000 +590 chr10 - 10976903 10978626 ENST00000441855.1 2 514 ENSG00000229240.3 LINC00710 0.000000 0.000000 +591 chr10 - 10988010 10994143 ENST00000596092.1 5 1025 ENSG00000229240.3 LINC00710 0.000000 0.000000 +592 chr10 - 10988011 10994197 ENST00000601050.2 6 994 ENSG00000229240.3 LINC00710 0.000000 0.000000 +593 chr10 - 10988821 10994058 ENST00000450174.2 3 873 ENSG00000229240.3 LINC00710 0.000000 0.000000 +594 chr10 - 10989127 10994129 ENST00000598573.1 2 666 ENSG00000229240.3 LINC00710 0.000000 0.000000 +595 chr10 + 11002114 11012779 ENST00000420825.1 3 537 ENSG00000231496.1 RP1-251M9.2 0.000000 0.000000 +596 chr10 + 11047259 11378666 ENST00000379261.4 14 9233 ENSG00000048740.13 CELF2 0.000000 0.000000 +597 chr10 + 11047351 11373245 ENST00000416382.2 14 2398 ENSG00000048740.13 CELF2 0.000000 0.000000 +598 chr10 - 11052127 11053082 ENST00000437825.1 2 244 ENSG00000228027.1 RP1-251M9.3 0.000000 0.000000 +599 chr10 + 11059893 11378666 ENST00000450189.1 15 7982 ENSG00000048740.13 CELF2 0.000000 0.000000 +600 chr10 + 11060053 11373245 ENST00000542579.1 14 2437 ENSG00000048740.13 CELF2 0.000000 0.000000 +601 chr10 + 11060106 11373245 ENST00000399850.3 14 2384 ENSG00000048740.13 CELF2 0.000000 0.000000 +602 chr10 + 11060106 11373245 ENST00000417956.2 14 2378 ENSG00000048740.13 CELF2 0.000000 0.000000 +603 chr10 + 11072297 11072831 ENST00000428853.2 2 433 ENSG00000229206.2 RP11-397O4.1 0.000000 0.000000 +604 chr10 - 11117094 11140436 ENST00000432370.2 4 853 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +605 chr10 - 11139277 11140123 ENST00000420634.1 2 144 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +606 chr10 + 11206993 11376357 ENST00000354440.2 13 7121 ENSG00000048740.13 CELF2 0.000000 0.000000 +607 chr10 + 11206993 11378666 ENST00000427450.1 15 8036 ENSG00000048740.13 CELF2 0.000000 0.000000 +608 chr10 + 11206993 11378674 ENST00000315874.4 14 8080 ENSG00000048740.13 CELF2 0.000000 0.000000 +609 chr10 + 11207103 11372602 ENST00000608830.1 14 1892 ENSG00000048740.13 CELF2 0.000000 0.000000 +610 chr10 + 11207447 11371252 ENST00000609870.1 10 1549 ENSG00000048740.13 CELF2 0.000000 0.000000 +611 chr10 + 11207447 11373240 ENST00000609692.1 12 2210 ENSG00000048740.13 CELF2 0.000000 0.000000 +612 chr10 + 11207449 11371242 ENST00000354897.3 13 1754 ENSG00000048740.13 CELF2 0.000000 0.000000 +613 chr10 + 11207491 11371055 ENST00000537122.1 11 1406 ENSG00000048740.13 CELF2 0.000000 0.000000 +614 chr10 - 11210885 11213339 ENST00000417273.1 2 430 ENSG00000230322.1 RP3-323N1.2 0.000000 0.000000 +615 chr10 - 11358797 11361847 ENST00000379256.3 2 2468 ENSG00000181800.5 CELF2-AS1 0.000000 0.000000 +616 chr10 - 11495945 11653753 ENST00000609104.1 15 11377 MSTRG.99 USP6NL 53.799053 80.773521 +617 chr10 - 11502509 11574274 ENST00000277575.5 14 4512 MSTRG.99 USP6NL 1.501744 2.254708 +618 chr10 - 11502509 11615840 ENST00000379237.2 14 4650 MSTRG.99 USP6NL 19.113306 28.696587 +619 chr10 - 11605186 11615604 ENST00000443016.1 2 2600 MSTRG.99 USP6NL 10.382935 15.588867 +620 chr10 - 11606126 11615840 ENST00000609853.1 2 1748 MSTRG.99 USP6NL 0.000000 0.000000 +621 chr10 - 11606126 11653753 ENST00000606752.1 3 1911 MSTRG.99 USP6NL 24.188240 36.316055 +622 chr10 + 11653304 11654226 ENST00000604634.1 1 923 MSTRG.100 RP11-138I18.1 0.000000 0.000000 +623 chr10 + 11721674 11722513 ENST00000604086.1 1 840 MSTRG.101 RP11-138I18.2 0.000000 0.000000 +624 chr10 + 11784365 11806069 ENST00000379215.4 5 1649 MSTRG.102 ECHDC3 32.007885 48.056419 +625 chr10 + 11784365 11806069 ENST00000496136.1 6 1767 MSTRG.102 ECHDC3 0.000000 0.000000 +626 chr10 + 11784445 11797607 ENST00000420401.1 4 881 MSTRG.102 ECHDC3 1.119195 1.680352 +627 chr10 + 11789274 11806069 ENST00000422887.1 4 1342 MSTRG.102 ECHDC3 2.068204 3.105187 +628 chr10 + 11789449 11800341 ENST00000495787.1 3 3117 MSTRG.102 ECHDC3 10.654637 15.996799 +629 chr10 + 11865338 11908782 ENST00000474155.1 4 735 MSTRG.103 PROSER2 3.476408 5.219455 +630 chr10 + 11865397 11914276 ENST00000277570.5 4 3333 MSTRG.103 PROSER2 10.926579 16.405092 +631 chr10 + 11873682 11908782 ENST00000444604.1 3 612 MSTRG.103 PROSER2 0.000000 0.000000 +632 chr10 - 11886804 11936699 MSTRG.104.1 5 7842 MSTRG.104 . 22.177277 33.296810 +633 chr10 - 11886873 11936699 MSTRG.104.2 7 8043 MSTRG.104 . 13.309088 19.982172 +634 chr10 - 11891612 11936699 ENST00000445498.1 6 3141 MSTRG.104 PROSER2-AS1 4.652959 6.985920 +635 chr10 - 11899288 11916794 ENST00000453242.1 4 475 MSTRG.104 PROSER2-AS1 0.000000 0.000000 +636 chr10 + 11911643 11914276 ENST00000379200.1 1 2634 MSTRG.103 PROSER2 0.000000 0.000000 +637 chr10 - 11962021 12077896 ENST00000356352.2 21 5569 MSTRG.105 UPF2 11.192912 16.804960 +638 chr10 - 11962021 12084833 ENST00000357604.5 22 5193 MSTRG.105 UPF2 137.675430 206.704926 +639 chr10 - 11962022 12085169 ENST00000397053.2 22 5369 MSTRG.105 UPF2 9.430462 14.158830 +640 chr10 + 11965180 11965287 ENST00000516148.1 1 108 MSTRG.106 RNU6-1095P 0.000000 0.000000 +641 chr10 - 12077058 12085169 ENST00000460569.1 2 640 MSTRG.105 UPF2 0.000000 0.000000 +642 chr10 + 12110960 12165505 MSTRG.107.1 16 5286 MSTRG.107 . 25.563810 38.381329 +643 chr10 + 12110971 12165505 ENST00000263035.4 17 5440 MSTRG.107 DHTKD1 47.172867 70.825020 +644 chr10 + 12111023 12133683 ENST00000437298.1 5 974 MSTRG.107 DHTKD1 0.000000 0.000000 +645 chr10 + 12123523 12139995 ENST00000465617.1 4 811 MSTRG.107 DHTKD1 0.000000 0.000000 +646 chr10 + 12131174 12136300 ENST00000415935.1 3 482 MSTRG.107 DHTKD1 0.000000 0.000000 +647 chr10 + 12136259 12155063 ENST00000448829.1 6 822 MSTRG.107 DHTKD1 0.000000 0.000000 +648 chr10 - 12158279 12158378 ENST00000606801.1 1 100 MSTRG.108 U6 0.000000 0.000000 +649 chr10 + 12160778 12162358 ENST00000479283.1 2 318 MSTRG.107 DHTKD1 0.000000 0.000000 +650 chr10 + 12171636 12197404 ENST00000379051.1 7 708 MSTRG.109 SEC61A2 0.000000 0.000000 +651 chr10 + 12171636 12207411 MSTRG.109.1 12 2481 MSTRG.109 . 18.891390 28.363401 +652 chr10 + 12171640 12207411 ENST00000379033.3 11 2470 MSTRG.109 SEC61A2 9.313019 13.982502 +653 chr10 + 12171664 12207411 MSTRG.109.4 11 2358 MSTRG.109 . 18.424944 27.663084 +654 chr10 + 12171665 12200104 ENST00000441368.1 7 833 MSTRG.109 SEC61A2 0.000000 0.000000 +655 chr10 + 12171693 12211960 ENST00000475268.1 13 2183 MSTRG.109 SEC61A2 0.000000 0.000000 +656 chr10 + 12171698 12207411 ENST00000298428.9 12 2478 MSTRG.109 SEC61A2 25.655600 38.519138 +657 chr10 + 12171698 12211960 ENST00000495368.1 14 2311 MSTRG.109 SEC61A2 1.289657 1.936282 +658 chr10 + 12171700 12211960 ENST00000304267.8 12 2035 MSTRG.109 SEC61A2 8.110664 12.177296 +659 chr10 + 12171701 12200104 ENST00000472221.1 8 907 MSTRG.109 SEC61A2 4.494958 6.748699 +660 chr10 + 12171726 12207411 ENST00000379020.4 11 2252 MSTRG.109 SEC61A2 0.000000 0.000000 +661 chr10 + 12171732 12197309 ENST00000379017.3 7 2090 MSTRG.109 SEC61A2 21.586386 32.409649 +662 chr10 - 12172759 12172815 ENST00000584402.1 1 57 MSTRG.110 MIR548AK 0.000000 0.000000 +663 chr10 + 12178108 12191766 ENST00000457034.1 3 314 MSTRG.109 SEC61A2 0.000000 0.000000 +664 chr10 + 12185139 12200104 ENST00000418772.1 4 496 MSTRG.109 SEC61A2 0.000000 0.000000 +665 chr10 + 12187662 12187765 ENST00000458754.1 1 104 MSTRG.111 snoU13 0.000000 0.000000 +666 chr10 + 12191855 12207411 ENST00000419021.1 5 1643 MSTRG.109 SEC61A2 0.000000 0.000000 +667 chr10 + 12199018 12200284 ENST00000466451.1 2 427 MSTRG.109 SEC61A2 1.245201 1.869536 +668 chr10 - 12207324 12238143 ENST00000491614.1 10 3453 MSTRG.112 NUDT5 203.516907 305.558868 +669 chr10 - 12209575 12238143 ENST00000378937.3 11 1241 MSTRG.112 NUDT5 30.731365 46.139858 +670 chr10 - 12209576 12238143 ENST00000537776.1 10 1201 MSTRG.112 NUDT5 4.068078 6.107784 +671 chr10 - 12209671 12238143 ENST00000378952.3 11 1201 MSTRG.112 NUDT5 44.452251 66.740303 +672 chr10 - 12209737 12221131 ENST00000476462.1 6 622 MSTRG.112 NUDT5 4.602143 6.909626 +673 chr10 - 12211721 12238143 ENST00000378940.3 10 1401 MSTRG.112 NUDT5 25.224062 37.871235 +674 chr10 - 12212231 12238143 ENST00000378927.3 8 1580 MSTRG.112 NUDT5 24.298885 36.482178 +675 chr10 - 12214489 12215812 ENST00000498825.1 2 473 MSTRG.112 NUDT5 7.129675 10.704445 +676 chr10 - 12219842 12238143 ENST00000444732.1 5 709 MSTRG.112 NUDT5 1.759801 2.642153 +677 chr10 + 12237964 12272995 ENST00000429258.2 8 664 MSTRG.113 CDC123 2.448430 3.676056 +678 chr10 + 12237965 12292588 ENST00000281141.4 13 1543 MSTRG.113 CDC123 734.090637 1102.158569 +679 chr10 + 12238129 12291717 ENST00000455773.3 11 971 MSTRG.113 CDC123 7.196745 10.805143 +680 chr10 + 12238195 12240875 ENST00000467016.1 2 296 MSTRG.113 CDC123 0.000000 0.000000 +681 chr10 + 12238222 12292588 ENST00000378900.2 12 1163 MSTRG.113 CDC123 18.895266 28.369223 +682 chr10 + 12238231 12279265 ENST00000442050.1 8 606 MSTRG.113 CDC123 2.501469 3.755688 +683 chr10 + 12238231 12292588 MSTRG.113.6 11 1052 MSTRG.113 . 20.723003 31.113375 +684 chr10 + 12259413 12292588 ENST00000498747.1 9 950 MSTRG.113 CDC123 0.000000 0.000000 +685 chr10 + 12272947 12292588 ENST00000440613.1 6 685 MSTRG.113 CDC123 1.984951 2.980192 +686 chr10 - 12286750 12289107 ENST00000598961.1 2 1827 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +687 chr10 - 12287627 12289844 ENST00000421657.1 2 1914 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +688 chr10 + 12288053 12292588 ENST00000497963.1 2 1233 MSTRG.113 CDC123 12.684372 19.044230 +689 chr10 + 12303670 12303926 ENST00000582360.1 1 257 ENSG00000265824.1 RN7SL232P 0.000000 0.000000 +690 chr10 - 12370135 12370388 ENST00000583190.1 1 254 ENSG00000264036.1 RN7SL198P 0.000000 0.000000 +691 chr10 + 12391481 12877545 ENST00000378847.3 11 8154 MSTRG.115 CAMK1D 6.504722 9.766145 +692 chr10 + 12391481 12877545 MSTRG.115.1 12 8134 MSTRG.115 . 8.534557 12.813725 +693 chr10 + 12391651 12708948 ENST00000487696.1 2 473 MSTRG.115 CAMK1D 0.000000 0.000000 +694 chr10 + 12391732 12869446 ENST00000378845.1 10 2882 MSTRG.115 CAMK1D 9.232329 13.861356 +695 chr10 + 12391732 12877545 MSTRG.115.4 11 7907 MSTRG.115 . 1.928658 2.895674 +696 chr10 + 12391758 12823236 MSTRG.115.7 6 1421 MSTRG.115 . 3.127103 4.695011 +697 chr10 + 12391758 12877545 MSTRG.115.6 12 7853 MSTRG.115 . 67.353546 101.124153 +698 chr10 + 12457927 12457999 ENST00000516629.1 1 73 MSTRG.116 SNORD45 0.000000 0.000000 +699 chr10 + 12498482 12498630 ENST00000516309.1 1 149 MSTRG.117 RNU6ATAC39P 0.000000 0.000000 +700 chr10 + 12580266 12869446 MSTRG.115.8 10 2774 MSTRG.115 . 0.000000 0.000000 +701 chr10 + 12620752 12620822 ENST00000582492.1 1 71 MSTRG.118 MIR4480 0.000000 0.000000 +702 chr10 - 12767253 12767352 ENST00000408404.1 1 100 MSTRG.119 MIR548Q 0.000000 0.000000 +703 chr10 - 12938627 13043697 ENST00000378825.3 3 2729 MSTRG.120 CCDC3 31.668880 47.547440 +704 chr10 - 12938627 13141811 ENST00000378839.1 7 3339 MSTRG.120 CCDC3 1.754488 2.634176 +705 chr10 - 12966679 12966785 ENST00000391197.1 1 107 MSTRG.121 RNA5SP300 0.000000 0.000000 +706 chr10 - 13099902 13100676 ENST00000441148.1 1 775 MSTRG.122 RPL5P25 3.600000 5.405015 +707 chr10 - 13103634 13141811 MSTRG.120.3 4 895 MSTRG.120 . 0.000000 0.000000 +708 chr10 - 13140536 13141811 MSTRG.120.4 3 511 MSTRG.120 . 0.000000 0.000000 +709 chr10 + 13141449 13180375 ENST00000263036.5 15 3916 MSTRG.123 OPTN 5.888237 8.840559 +710 chr10 + 13141603 13180375 ENST00000378764.2 15 3744 MSTRG.123 OPTN 6.625837 9.947986 +711 chr10 + 13142069 13180375 MSTRG.123.3 15 3622 MSTRG.123 . 92.837242 139.385193 +712 chr10 + 13142070 13180375 MSTRG.123.4 14 3469 MSTRG.123 . 94.711594 142.199341 +713 chr10 + 13142070 13180375 MSTRG.123.5 16 3693 MSTRG.123 . 90.055580 135.208832 +714 chr10 + 13142159 13151662 ENST00000487935.1 3 511 MSTRG.123 OPTN 0.000000 0.000000 +715 chr10 + 13142163 13161040 ENST00000482140.1 5 727 MSTRG.123 OPTN 2.141361 3.215025 +716 chr10 + 13142169 13180375 ENST00000378757.2 14 3388 MSTRG.123 OPTN 90.886459 136.456299 +717 chr10 + 13142173 13158340 ENST00000430081.1 5 861 MSTRG.123 OPTN 51.076462 76.685844 +718 chr10 + 13142173 13180375 ENST00000378748.3 16 3605 MSTRG.123 OPTN 116.551399 174.989471 +719 chr10 + 13142173 13180375 ENST00000378752.3 16 3572 MSTRG.123 OPTN 87.346672 131.141693 +720 chr10 + 13142225 13180375 ENST00000378747.3 15 3484 MSTRG.123 OPTN 80.153778 120.342331 +721 chr10 - 13146574 13146793 ENST00000456003.1 1 220 MSTRG.124 SNRPGP5 2.231818 3.350836 +722 chr10 + 13154487 13158540 ENST00000486862.1 2 423 MSTRG.123 OPTN 7.297231 10.956013 +723 chr10 + 13158268 13165198 ENST00000424614.1 4 664 MSTRG.123 OPTN 37.098366 55.699230 +724 chr10 + 13173319 13180375 ENST00000469025.1 4 2099 MSTRG.123 OPTN 0.000000 0.000000 +725 chr10 - 13181196 13181533 ENST00000442321.1 1 338 ENSG00000234175.1 RP11-730A19.9 0.000000 0.000000 +726 chr10 - 13184185 13184977 ENST00000442900.1 1 793 ENSG00000228330.1 RP11-730A19.5 0.000000 0.000000 +727 chr10 - 13198684 13200136 ENST00000447253.1 1 1453 ENSG00000203414.2 BTBD7P1 0.000000 0.000000 +728 chr10 + 13200491 13201463 MSTRG.125.1 1 973 MSTRG.125 . 6.612538 9.928019 +729 chr10 - 13201477 13201777 ENST00000418616.1 1 301 MSTRG.126 RP11-730A19.7 0.000000 0.000000 +730 chr10 + 13203554 13253104 ENST00000378714.3 20 4547 MSTRG.127 MCM10 13.979832 20.989222 +731 chr10 + 13203579 13214480 ENST00000479669.1 3 475 MSTRG.127 MCM10 0.000000 0.000000 +732 chr10 + 13203579 13253104 ENST00000484800.2 20 4525 MSTRG.127 MCM10 20.338480 30.536053 +733 chr10 + 13206128 13253104 ENST00000378694.1 18 4587 MSTRG.127 MCM10 1.467268 2.202946 +734 chr10 + 13234491 13237580 ENST00000459751.1 2 618 MSTRG.127 MCM10 0.000000 0.000000 +735 chr10 + 13237086 13243872 ENST00000481292.1 4 900 MSTRG.127 MCM10 0.000000 0.000000 +736 chr10 + 13240763 13246526 ENST00000485659.1 3 467 MSTRG.127 MCM10 0.000000 0.000000 +737 chr10 + 13259269 13259375 ENST00000606623.1 1 107 MSTRG.128 RNU6-6P 137.794388 206.883545 +738 chr10 - 13263767 13276331 ENST00000378681.3 5 826 ENSG00000165623.5 UCMA 0.000000 0.000000 +739 chr10 - 13263767 13276334 ENST00000463405.2 4 763 ENSG00000165623.5 UCMA 0.000000 0.000000 +740 chr10 - 13319796 13341763 ENST00000396913.2 8 1732 MSTRG.129 PHYH 29.053120 43.620155 +741 chr10 - 13319800 13342101 ENST00000263038.4 9 1577 MSTRG.129 PHYH 85.397118 128.214645 +742 chr10 - 13319843 13344412 ENST00000396920.3 9 1829 MSTRG.129 PHYH 4.857213 7.292586 +743 chr10 - 13325690 13341763 ENST00000453759.2 7 1097 MSTRG.129 PHYH 0.000000 0.000000 +744 chr10 - 13330412 13342101 ENST00000479604.1 6 691 MSTRG.129 PHYH 0.000000 0.000000 +745 chr10 - 13333461 13336987 ENST00000464049.1 2 1012 MSTRG.129 PHYH 3.088645 4.637270 +746 chr10 - 13337228 13342101 ENST00000463730.1 3 572 MSTRG.129 PHYH 0.000000 0.000000 +747 chr10 - 13350145 13350447 ENST00000429930.1 1 303 ENSG00000226209.1 AL138764.1 0.000000 0.000000 +748 chr10 - 13359424 13389358 MSTRG.130.1 9 3057 MSTRG.130 . 139.653427 209.674698 +749 chr10 - 13359424 13390297 ENST00000327347.5 9 3273 MSTRG.130 SEPHS1 274.140259 411.592316 +750 chr10 - 13360080 13390297 ENST00000378614.4 8 2404 MSTRG.130 SEPHS1 1.629672 2.446778 +751 chr10 - 13360083 13390297 ENST00000545675.1 10 2706 MSTRG.130 SEPHS1 2.153077 3.232615 +752 chr10 - 13360590 13390297 ENST00000537130.1 8 1836 MSTRG.130 SEPHS1 6.491055 9.745625 +753 chr10 - 13375877 13389358 ENST00000413411.1 5 660 MSTRG.130 SEPHS1 0.000000 0.000000 +754 chr10 - 13375901 13382790 ENST00000425947.1 4 383 MSTRG.130 SEPHS1 4.312658 6.474995 +755 chr10 - 13380716 13387460 ENST00000494329.1 2 796 MSTRG.130 SEPHS1 16.983124 25.498344 +756 chr10 + 13390362 13390978 MSTRG.131.1 1 617 MSTRG.131 . 4.423015 6.640684 +757 chr10 + 13457202 13465133 ENST00000448272.1 2 454 ENSG00000233256.1 RP11-445K13.2 0.000000 0.000000 +758 chr10 - 13480484 13502083 ENST00000486542.1 4 1764 MSTRG.132 BEND7 0.000000 0.000000 +759 chr10 - 13480501 13570974 ENST00000396900.2 9 2672 MSTRG.132 BEND7 0.000000 0.000000 +760 chr10 - 13480637 13544976 ENST00000341083.3 9 2239 MSTRG.132 BEND7 0.000000 0.000000 +761 chr10 - 13483084 13570974 MSTRG.132.4 9 4034 MSTRG.132 . 15.247412 22.892359 +762 chr10 - 13483084 13570974 MSTRG.132.5 9 7172 MSTRG.132 . 1.555953 2.336097 +763 chr10 - 13483084 13570974 MSTRG.132.6 8 7895 MSTRG.132 . 1.783909 2.678349 +764 chr10 - 13483084 13570974 MSTRG.132.7 9 4335 MSTRG.132 . 1.537333 2.308141 +765 chr10 - 13483087 13570974 MSTRG.132.10 6 7401 MSTRG.132 . 1.066257 1.600871 +766 chr10 - 13483087 13570974 MSTRG.132.11 9 7133 MSTRG.132 . 2.227433 3.344253 +767 chr10 - 13483087 13570974 MSTRG.132.12 10 4091 MSTRG.132 . 2.552535 3.832359 +768 chr10 - 13483087 13570974 MSTRG.132.13 10 4049 MSTRG.132 . 2.196652 3.298038 +769 chr10 - 13483087 13570974 MSTRG.132.8 9 4034 MSTRG.132 . 7.195125 10.802711 +770 chr10 - 13483087 13570974 MSTRG.132.9 8 7853 MSTRG.132 . 2.376769 3.568465 +771 chr10 - 13483088 13523120 ENST00000440282.1 3 6571 MSTRG.132 BEND7 29.347219 44.061714 +772 chr10 - 13483088 13570974 MSTRG.132.14 9 4334 MSTRG.132 . 1.564270 2.348584 +773 chr10 - 13483090 13570974 ENST00000396898.2 9 2375 MSTRG.132 BEND7 1.532315 2.300607 +774 chr10 - 13483113 13570974 MSTRG.132.17 9 2156 MSTRG.132 . 1.247584 1.873114 +775 chr10 - 13483113 13570974 MSTRG.132.18 9 7146 MSTRG.132 . 1.698926 2.550756 +776 chr10 - 13483113 13570974 MSTRG.132.19 7 5631 MSTRG.132 . 1.406456 2.111643 +777 chr10 - 13483114 13570974 MSTRG.132.20 9 2116 MSTRG.132 . 1.389332 2.085934 +778 chr10 - 13483355 13544976 ENST00000378605.3 8 1640 MSTRG.132 BEND7 1.881795 2.825314 +779 chr10 - 13483355 13570974 MSTRG.132.21 10 3820 MSTRG.132 . 1.680913 2.523711 +780 chr10 - 13483399 13570974 MSTRG.132.23 9 6818 MSTRG.132 . 1.979426 2.971897 +781 chr10 - 13484980 13494658 ENST00000480703.1 3 598 MSTRG.132 BEND7 5.078050 7.624150 +782 chr10 - 13484980 13570974 MSTRG.132.24 10 4355 MSTRG.132 . 0.000000 0.000000 +783 chr10 - 13484980 13570974 MSTRG.132.25 9 2400 MSTRG.132 . 1.159470 1.740820 +784 chr10 - 13487290 13494658 ENST00000463303.1 3 442 MSTRG.132 BEND7 0.000000 0.000000 +785 chr10 - 13487316 13523120 ENST00000469555.1 5 695 MSTRG.132 BEND7 0.000000 0.000000 +786 chr10 - 13534692 13538929 ENST00000492675.1 2 349 MSTRG.132 BEND7 0.000000 0.000000 +787 chr10 - 13534692 13570974 MSTRG.132.29 5 1226 MSTRG.132 . 1.609298 2.416189 +788 chr10 - 13538788 13570974 ENST00000466271.1 4 990 MSTRG.132 BEND7 0.000000 0.000000 +789 chr10 - 13553206 13553313 ENST00000365638.1 1 108 MSTRG.133 Y_RNA 1.000000 1.501393 +790 chr10 + 13570516 13572262 ENST00000438431.1 2 380 MSTRG.134 RP11-214D15.2 0.000000 0.000000 +791 chr10 + 13628927 13673142 ENST00000378572.3 10 1991 MSTRG.135 PRPF18 33.482147 50.269867 +792 chr10 + 13628927 13697929 MSTRG.135.1 15 12325 MSTRG.135 . 43.169544 64.814461 +793 chr10 + 13628939 13656086 ENST00000417658.1 10 1088 MSTRG.135 PRPF18 0.000000 0.000000 +794 chr10 + 13628968 13653683 ENST00000320054.4 7 819 MSTRG.135 PRPF18 9.906383 14.873375 +795 chr10 + 13628968 13697929 MSTRG.135.4 15 10144 MSTRG.135 . 0.000000 0.000000 +796 chr10 - 13633460 13634323 ENST00000445338.1 1 864 MSTRG.136 RP11-295P9.2 1.741637 2.614882 +797 chr10 + 13652047 13697929 ENST00000601460.1 7 1204 MSTRG.135 RP11-295P9.3 3.137599 4.710770 +798 chr10 + 13658531 13687074 ENST00000595538.1 5 734 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +799 chr10 + 13672284 13687074 ENST00000596044.1 5 824 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +800 chr10 + 13673143 13687074 ENST00000601075.1 4 923 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +801 chr10 + 13673288 13697929 ENST00000597920.1 4 1893 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +802 chr10 + 13673333 13690230 ENST00000440878.1 3 397 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +803 chr10 + 13673722 13696427 ENST00000601758.1 5 744 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +804 chr10 + 13673768 13697929 ENST00000599639.1 4 1099 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +805 chr10 + 13674680 13697929 ENST00000596499.1 6 1159 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +806 chr10 + 13678997 13687074 ENST00000599378.1 4 603 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +807 chr10 + 13680646 13686563 ENST00000610032.1 1 5918 MSTRG.135 RP11-295P9.3 7.721727 11.593348 +808 chr10 + 13680825 13688669 ENST00000437446.1 2 1852 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +809 chr10 + 13685644 13695446 ENST00000600249.1 6 773 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +810 chr10 - 13685706 13900912 ENST00000358621.4 23 6407 MSTRG.137 FRMD4A 39.755573 59.688747 +811 chr10 - 13685706 13933775 MSTRG.137.2 24 6559 MSTRG.137 . 164.385056 246.806595 +812 chr10 - 13685706 14050897 MSTRG.137.1 23 7174 MSTRG.137 . 154.090637 231.350616 +813 chr10 - 13685712 14372883 ENST00000357447.2 25 6815 MSTRG.137 FRMD4A 0.000000 0.000000 +814 chr10 + 13686576 13690773 ENST00000600501.1 3 793 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +815 chr10 + 13686791 13697929 ENST00000596235.1 6 1237 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +816 chr10 - 13688056 14050897 MSTRG.137.5 24 4860 MSTRG.137 . 40.336399 60.560795 +817 chr10 - 13688272 13696526 ENST00000475325.1 2 875 MSTRG.137 FRMD4A 2.257269 3.389048 +818 chr10 - 13688334 13699173 ENST00000495956.1 3 1337 MSTRG.137 FRMD4A 0.000000 0.000000 +819 chr10 + 13688670 13697929 ENST00000419851.2 4 1380 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +820 chr10 + 13688844 13697929 ENST00000594575.1 5 1355 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +821 chr10 + 13690184 13710595 ENST00000593351.1 3 1120 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +822 chr10 + 13691264 13697929 ENST00000600511.1 4 949 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +823 chr10 + 13691284 13697929 ENST00000593358.1 4 760 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +824 chr10 - 13693905 14372182 ENST00000378503.1 23 3201 MSTRG.137 FRMD4A 0.000000 0.000000 +825 chr10 + 13694052 13697929 ENST00000598625.1 3 1065 MSTRG.135 RP11-295P9.3 2.520025 3.783548 +826 chr10 + 13695825 13697929 ENST00000430721.1 2 1155 MSTRG.135 RP11-295P9.3 2.445020 3.670936 +827 chr10 - 13699174 13750043 MSTRG.137.11 12 2390 MSTRG.137 . 15.003537 22.526207 +828 chr10 - 13699174 13750043 MSTRG.137.13 12 2460 MSTRG.137 . 12.358953 18.555649 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ENST00000342409.2 14 2106 MSTRG.137 FRMD4A 0.000000 0.000000 +841 chr10 - 13735983 13750043 ENST00000477221.1 4 971 MSTRG.137 FRMD4A 32.405895 48.653988 +842 chr10 + 13746978 13747072 ENST00000410303.1 1 95 MSTRG.140 AL157392.1 0.000000 0.000000 +843 chr10 + 13752415 13754054 ENST00000412388.1 2 373 MSTRG.141 RP11-295P9.6 0.000000 0.000000 +844 chr10 + 13769796 13769916 ENST00000362537.1 1 121 MSTRG.142 RNA5SP301 0.000000 0.000000 +845 chr10 + 13771383 13798200 ENST00000449462.1 3 474 MSTRG.143 RP11-353M9.1 0.000000 0.000000 +846 chr10 + 13912797 13913175 ENST00000475013.1 1 379 MSTRG.144 RP11-308K19.2 0.000000 0.000000 +847 chr10 + 14033815 14049525 ENST00000446193.1 3 570 MSTRG.145 RP11-142M10.2 0.000000 0.000000 +848 chr10 + 14053432 14063601 MSTRG.146.1 2 1693 MSTRG.146 . 1.911991 2.870650 +849 chr10 + 14116283 14129734 ENST00000451617.1 3 920 MSTRG.147 RP11-397C18.2 0.000000 0.000000 +850 chr10 + 14116283 14131638 MSTRG.147.1 5 1432 MSTRG.147 . 1.677719 2.518916 +851 chr10 + 14116702 14120540 MSTRG.147.4 2 235 MSTRG.147 . 2.323004 3.487742 +852 chr10 + 14116702 14128905 MSTRG.147.3 3 441 MSTRG.147 . 2.621739 3.936261 +853 chr10 - 14124946 14504141 ENST00000493380.1 4 1197 MSTRG.137 FRMD4A 0.000000 0.000000 +854 chr10 - 14368174 14504141 ENST00000475141.2 4 1233 MSTRG.137 FRMD4A 0.000000 0.000000 +855 chr10 + 14417237 14432137 MSTRG.148.1 3 3915 MSTRG.148 . 19.642202 29.490667 +856 chr10 + 14417459 14432137 MSTRG.148.2 4 3009 MSTRG.148 . 60.456059 90.768311 +857 chr10 + 14418734 14432137 MSTRG.148.3 3 1684 MSTRG.148 . 226.303741 339.770874 +858 chr10 + 14418887 14432137 MSTRG.148.4 4 2315 MSTRG.148 . 53.651073 80.551353 +859 chr10 + 14418887 14456385 MSTRG.148.5 3 2567 MSTRG.148 . 24.527899 36.826019 +860 chr10 - 14425199 14425276 ENST00000584305.1 1 78 MSTRG.149 MIR4293 0.000000 0.000000 +861 chr10 + 14460801 14481374 MSTRG.150.1 3 861 MSTRG.150 . 1.692218 2.540684 +862 chr10 + 14478575 14478660 ENST00000408444.1 1 86 MSTRG.151 MIR1265 0.000000 0.000000 +863 chr10 - 14560556 14590669 ENST00000378470.1 4 3316 MSTRG.152 FAM107B 319.031433 478.991608 +864 chr10 - 14560556 14598413 MSTRG.152.2 5 3204 MSTRG.152 . 58.612175 87.999916 +865 chr10 - 14560556 14646417 MSTRG.152.1 6 3404 MSTRG.152 . 30.810141 46.258133 +866 chr10 - 14560556 14646417 MSTRG.152.3 6 3387 MSTRG.152 . 42.644135 64.025612 +867 chr10 - 14560556 14646417 MSTRG.152.4 5 3338 MSTRG.152 . 57.255219 85.962593 +868 chr10 - 14560556 14646417 MSTRG.152.5 6 5580 MSTRG.152 . 73.359589 110.141579 +869 chr10 - 14560559 14816896 ENST00000181796.2 5 3785 MSTRG.152 FAM107B 0.000000 0.000000 +870 chr10 - 14561158 14646417 ENST00000468747.1 4 2662 MSTRG.152 FAM107B 9.144736 13.729845 +871 chr10 - 14561512 14646417 ENST00000378467.4 5 2374 MSTRG.152 FAM107B 1.286109 1.930955 +872 chr10 - 14561901 14816896 ENST00000487335.1 6 2509 MSTRG.152 FAM107B 0.000000 0.000000 +873 chr10 - 14562794 14614188 ENST00000378465.3 4 1113 MSTRG.152 FAM107B 0.000000 0.000000 +874 chr10 - 14562850 14614188 ENST00000378458.2 5 1284 MSTRG.152 FAM107B 0.000000 0.000000 +875 chr10 - 14563016 14598360 ENST00000478076.1 4 971 MSTRG.152 FAM107B 0.000000 0.000000 +876 chr10 - 14563072 14614188 ENST00000378462.1 4 768 MSTRG.152 FAM107B 0.000000 0.000000 +877 chr10 - 14563088 14590669 ENST00000481209.1 5 887 MSTRG.152 FAM107B 0.000000 0.000000 +878 chr10 - 14563095 14564224 ENST00000475858.1 2 568 MSTRG.152 FAM107B 0.000000 0.000000 +879 chr10 - 14563136 14596228 ENST00000496330.1 5 697 MSTRG.152 FAM107B 0.000000 0.000000 +880 chr10 - 14563136 14598413 ENST00000492700.1 4 558 MSTRG.152 FAM107B 0.000000 0.000000 +881 chr10 - 14563157 14614338 ENST00000479731.1 4 595 MSTRG.152 FAM107B 0.000000 0.000000 +882 chr10 - 14563193 14614338 ENST00000468492.1 5 625 MSTRG.152 FAM107B 0.000000 0.000000 +883 chr10 - 14563200 14614188 ENST00000452706.2 4 868 MSTRG.152 FAM107B 0.000000 0.000000 +884 chr10 - 14563206 14574709 ENST00000489100.1 4 559 MSTRG.152 FAM107B 0.000000 0.000000 +885 chr10 - 14563211 14598014 ENST00000494865.1 5 691 MSTRG.152 FAM107B 0.000000 0.000000 +886 chr10 - 14563280 14598360 ENST00000475786.1 5 773 MSTRG.152 FAM107B 0.000000 0.000000 +887 chr10 - 14563868 14614188 ENST00000488576.1 5 711 MSTRG.152 FAM107B 0.000000 0.000000 +888 chr10 - 14563869 14595482 ENST00000474143.1 3 496 MSTRG.152 FAM107B 0.000000 0.000000 +889 chr10 - 14563875 14654551 ENST00000442012.1 4 458 MSTRG.152 FAM107B 0.000000 0.000000 +890 chr10 - 14563893 14614188 ENST00000482277.1 4 642 MSTRG.152 FAM107B 0.000000 0.000000 +891 chr10 - 14563944 14614188 ENST00000472095.1 5 632 MSTRG.152 FAM107B 0.000000 0.000000 +892 chr10 - 14571527 14646417 ENST00000471815.1 3 1022 MSTRG.152 FAM107B 0.000000 0.000000 +893 chr10 - 14571954 14614188 ENST00000464952.1 4 748 MSTRG.152 FAM107B 0.000000 0.000000 +894 chr10 - 14576785 14614188 ENST00000495292.1 3 576 MSTRG.152 FAM107B 0.000000 0.000000 +895 chr10 - 14644456 14646417 ENST00000491458.1 2 573 MSTRG.152 FAM107B 1.499958 2.252027 +896 chr10 + 14694741 14703690 ENST00000443282.1 3 357 MSTRG.153 RP11-7C6.1 0.000000 0.000000 +897 chr10 - 14705394 14705493 ENST00000364896.1 1 100 MSTRG.154 RNA5SP302 0.000000 0.000000 +898 chr10 - 14765170 14766054 ENST00000456871.1 1 885 MSTRG.155 RP11-398C13.2 0.000000 0.000000 +899 chr10 - 14860113 14880071 MSTRG.156.1 5 2600 MSTRG.156 . 4.395773 6.599783 +900 chr10 - 14860273 14880071 MSTRG.156.2 6 2561 MSTRG.156 . 0.000000 0.000000 +901 chr10 - 14860304 14880071 MSTRG.156.3 6 2526 MSTRG.156 . 5.814252 8.729478 +902 chr10 - 14861249 14880574 ENST00000378442.1 6 1492 MSTRG.156 CDNF 0.000000 0.000000 +903 chr10 - 14861530 14880071 ENST00000378441.2 4 1041 MSTRG.156 CDNF 0.000000 0.000000 +904 chr10 - 14861884 14870271 ENST00000467405.1 3 529 MSTRG.156 CDNF 0.000000 0.000000 +905 chr10 - 14861887 14878293 ENST00000466269.1 4 585 MSTRG.156 CDNF 0.000000 0.000000 +906 chr10 - 14861979 14880071 ENST00000465530.1 4 690 MSTRG.156 CDNF 1.193226 1.791501 +907 chr10 + 14880163 14913740 ENST00000378372.3 14 1904 MSTRG.157 HSPA14 183.789368 275.940094 +908 chr10 + 14880228 14884845 ENST00000493863.1 4 1108 MSTRG.157 HSPA14 0.000000 0.000000 +909 chr10 + 14880228 14888988 MSTRG.157.2 5 4727 MSTRG.157 . 63.752823 95.718048 +910 chr10 + 14880301 14888988 ENST00000437161.2 4 3941 MSTRG.157 HSPA14 17.541985 26.337414 +911 chr10 + 14880330 14884845 ENST00000493178.1 5 1105 MSTRG.157 HSPA14 3.276608 4.919477 +912 chr10 + 14880436 14891719 ENST00000441647.1 6 630 MSTRG.157 HSPA14 7.526527 11.300276 +913 chr10 + 14892714 14896279 ENST00000470430.1 3 927 MSTRG.157 HSPA14 13.831849 20.767042 +914 chr10 - 14919687 14920685 ENST00000609399.1 1 999 MSTRG.158 RP11-398C13.6 7.741742 11.623398 +915 chr10 + 14920819 14954823 ENST00000378331.5 5 11468 MSTRG.159 SUV39H2 5.051112 7.583704 +916 chr10 + 14920819 14955409 MSTRG.159.1 6 11880 MSTRG.159 . 0.000000 0.000000 +917 chr10 + 14920847 14954823 ENST00000433779.1 6 11087 MSTRG.159 SUV39H2 1.994061 2.993870 +918 chr10 + 14920862 14954823 ENST00000378325.3 6 11031 MSTRG.159 SUV39H2 1.591255 2.389099 +919 chr10 + 14920888 14954823 ENST00000354919.6 6 11545 MSTRG.159 SUV39H2 4.395483 6.599348 +920 chr10 + 14920888 14954823 MSTRG.159.6 6 11586 MSTRG.159 . 2.759420 4.142974 +921 chr10 + 14920888 14955409 MSTRG.159.5 7 11957 MSTRG.159 . 0.000000 0.000000 +922 chr10 + 14920899 14954823 ENST00000313519.5 5 11596 MSTRG.159 SUV39H2 0.000000 0.000000 +923 chr10 + 14920921 14939516 ENST00000420416.1 2 711 MSTRG.159 SUV39H2 0.000000 0.000000 +924 chr10 + 14921123 14954823 MSTRG.159.10 6 11891 MSTRG.159 . 5.136600 7.712056 +925 chr10 + 14921815 14939516 ENST00000412254.1 3 1070 MSTRG.159 SUV39H2 0.000000 0.000000 +926 chr10 + 14923499 14954823 ENST00000358298.6 4 10842 MSTRG.159 SUV39H2 0.000000 0.000000 +927 chr10 - 14939358 14996431 ENST00000378289.4 14 3532 MSTRG.160 DCLRE1C 7.582049 11.383636 +928 chr10 - 14948897 14996431 ENST00000453695.2 14 4011 MSTRG.160 DCLRE1C 17.650900 26.500938 +929 chr10 - 14949878 14996431 ENST00000378246.2 13 2974 MSTRG.160 DCLRE1C 0.000000 0.000000 +930 chr10 - 14950165 14996431 ENST00000357717.2 12 2602 MSTRG.160 DCLRE1C 0.000000 0.000000 +931 chr10 - 14950170 14996431 ENST00000378249.1 12 2630 MSTRG.160 DCLRE1C 0.000000 0.000000 +932 chr10 - 14950170 14996431 ENST00000378254.1 15 2869 MSTRG.160 DCLRE1C 0.000000 0.000000 +933 chr10 - 14950170 14996431 ENST00000378255.1 16 3191 MSTRG.160 DCLRE1C 0.000000 0.000000 +934 chr10 - 14950170 14996431 ENST00000378258.1 15 2823 MSTRG.160 DCLRE1C 0.000000 0.000000 +935 chr10 - 14950170 14996431 ENST00000378278.2 14 2738 MSTRG.160 DCLRE1C 0.000000 0.000000 +936 chr10 - 14950170 14996431 ENST00000396817.2 16 3145 MSTRG.160 DCLRE1C 0.000000 0.000000 +937 chr10 - 14950187 14965674 ENST00000378242.1 3 1933 MSTRG.160 DCLRE1C 0.000000 0.000000 +938 chr10 - 14950187 14996431 MSTRG.160.11 16 2937 MSTRG.160 . 0.000000 0.000000 +939 chr10 - 14950741 14970141 ENST00000492201.1 6 1020 MSTRG.160 DCLRE1C 0.000000 0.000000 +940 chr10 - 14950741 14996431 MSTRG.160.13 15 2307 MSTRG.160 . 0.000000 0.000000 +941 chr10 - 14951169 14953321 ENST00000489845.1 2 294 MSTRG.160 DCLRE1C 0.000000 0.000000 +942 chr10 - 14951169 15059043 MSTRG.160.15 7 780 MSTRG.160 . 0.000000 0.000000 +943 chr10 - 14961795 14970141 ENST00000489161.1 3 253 MSTRG.160 DCLRE1C 0.000000 0.000000 +944 chr10 - 14961795 14996431 MSTRG.160.17 13 1549 MSTRG.160 . 0.000000 0.000000 +945 chr10 - 14970142 14996431 ENST00000418843.1 11 1302 MSTRG.160 DCLRE1C 0.000000 0.000000 +946 chr10 - 14976444 14996431 ENST00000378241.1 10 1247 MSTRG.160 DCLRE1C 0.000000 0.000000 +947 chr10 - 14976722 14996431 ENST00000456122.1 8 1290 MSTRG.160 DCLRE1C 0.000000 0.000000 +948 chr10 + 15001398 15030049 MSTRG.161.1 6 1215 MSTRG.161 . 1.515085 2.274738 +949 chr10 + 15001438 15014850 ENST00000407572.1 3 625 MSTRG.161 MEIG1 0.000000 0.000000 +950 chr10 + 15001438 15014850 ENST00000477770.1 2 458 MSTRG.161 MEIG1 0.000000 0.000000 +951 chr10 + 15001509 15014850 ENST00000496225.2 3 686 MSTRG.161 MEIG1 0.000000 0.000000 +952 chr10 + 15008438 15014850 ENST00000378240.1 2 507 MSTRG.161 MEIG1 0.000000 0.000000 +953 chr10 + 15014554 15030049 ENST00000467536.1 3 548 MSTRG.161 MEIG1 0.000000 0.000000 +954 chr10 - 15028941 15029514 ENST00000431186.2 1 574 MSTRG.162 OR7E110P 0.000000 0.000000 +955 chr10 - 15041049 15042054 ENST00000502808.2 1 1006 MSTRG.163 OR7E26P 0.000000 0.000000 +956 chr10 - 15049860 15050883 ENST00000382617.4 1 1024 MSTRG.164 OR7E115P 0.000000 0.000000 +957 chr10 - 15057071 15130775 ENST00000378211.3 8 997 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +958 chr10 - 15057369 15063862 ENST00000454630.1 5 470 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +959 chr10 + 15074226 15107752 ENST00000428897.1 6 859 MSTRG.165 OLAH 0.000000 0.000000 +960 chr10 + 15074252 15098981 ENST00000413672.1 4 583 MSTRG.165 OLAH 0.000000 0.000000 +961 chr10 + 15080621 15107752 ENST00000429028.1 6 797 MSTRG.165 OLAH 0.000000 0.000000 +962 chr10 + 15085895 15115851 ENST00000378228.3 8 1675 MSTRG.165 OLAH 1.291759 1.939438 +963 chr10 + 15085926 15104083 ENST00000378225.1 4 810 MSTRG.165 OLAH 0.000000 0.000000 +964 chr10 + 15085962 15115851 ENST00000378217.3 9 1767 MSTRG.165 OLAH 0.000000 0.000000 +965 chr10 + 15091722 15110069 ENST00000493912.1 5 491 MSTRG.165 OLAH 0.000000 0.000000 +966 chr10 + 15107537 15115851 ENST00000485251.1 2 982 MSTRG.165 OLAH 0.000000 0.000000 +967 chr10 - 15119522 15130775 ENST00000356189.5 4 1322 MSTRG.160 ACBD7 14.512321 21.788700 +968 chr10 - 15120486 15130715 ENST00000496890.1 4 709 MSTRG.160 ACBD7 0.000000 0.000000 +969 chr10 - 15135262 15135610 ENST00000452090.1 1 349 ENSG00000228312.1 GAPDHP45 0.000000 0.000000 +970 chr10 - 15137384 15139318 ENST00000378207.3 2 1714 MSTRG.166 C10orf111 0.000000 0.000000 +971 chr10 + 15139179 15146256 ENST00000378203.1 3 1302 MSTRG.167 RPP38 38.159927 57.293056 +972 chr10 + 15139214 15148129 ENST00000378201.2 5 833 MSTRG.167 RPP38 0.000000 0.000000 +973 chr10 + 15139236 15181817 ENST00000451677.1 3 323 MSTRG.167 RPP38 0.000000 0.000000 +974 chr10 + 15139330 15146256 ENST00000378202.5 2 1032 MSTRG.167 RPP38 25.470892 38.241821 +975 chr10 + 15139381 15146256 ENST00000378197.4 3 1457 MSTRG.167 RPP38 76.158447 114.343765 +976 chr10 + 15139419 15146256 ENST00000441850.1 2 1300 MSTRG.167 RPP38 15.982506 23.996025 +977 chr10 - 15144583 15151838 ENST00000466201.1 2 1238 MSTRG.168 NMT2 4.162977 6.250266 +978 chr10 - 15147758 15210692 MSTRG.168.2 12 2497 MSTRG.168 . 23.072605 34.641048 +979 chr10 - 15147758 15210692 MSTRG.168.3 13 2540 MSTRG.168 . 24.736826 37.139698 +980 chr10 - 15148372 15161512 ENST00000486786.1 4 803 MSTRG.168 NMT2 3.533793 5.305613 +981 chr10 - 15149865 15210692 ENST00000378165.4 12 2907 MSTRG.168 NMT2 51.161301 76.813225 +982 chr10 - 15150293 15210692 ENST00000378150.1 13 2522 MSTRG.168 NMT2 50.602943 75.974907 +983 chr10 - 15151020 15202124 ENST00000540259.1 12 1832 MSTRG.168 NMT2 0.000000 0.000000 +984 chr10 - 15151098 15210501 ENST00000535341.1 13 1669 MSTRG.168 NMT2 0.000000 0.000000 +985 chr10 - 15174816 15183352 ENST00000478580.1 5 840 MSTRG.168 NMT2 1.371959 2.059850 +986 chr10 - 15196801 15197319 ENST00000415473.1 1 519 MSTRG.169 PPIAP30 0.000000 0.000000 +987 chr10 - 15213035 15213277 ENST00000450788.1 1 243 ENSG00000228181.1 RP11-455B2.9 0.000000 0.000000 +988 chr10 - 15253642 15413061 ENST00000378116.4 8 3955 MSTRG.170 FAM171A1 183.600555 275.656616 +989 chr10 - 15256170 15290814 ENST00000477161.1 3 725 MSTRG.170 FAM171A1 0.000000 0.000000 +990 chr10 + 15279491 15283766 ENST00000433455.1 2 794 MSTRG.171 RP11-25G10.2 0.000000 0.000000 +991 chr10 - 15290638 15413061 ENST00000455654.1 4 605 MSTRG.170 FAM171A1 0.000000 0.000000 +992 chr10 - 15555948 15762124 ENST00000378076.3 30 6755 MSTRG.172 ITGA8 17.906363 26.884489 +993 chr10 - 15638512 15646286 ENST00000477064.1 2 867 MSTRG.172 ITGA8 0.000000 0.000000 +994 chr10 - 15653509 15686220 ENST00000468882.1 4 425 MSTRG.172 ITGA8 0.000000 0.000000 +995 chr10 - 15820169 15860007 ENST00000378036.1 6 2452 MSTRG.173 FAM188A 0.000000 0.000000 +996 chr10 - 15820169 15902519 ENST00000277632.3 15 2381 MSTRG.173 FAM188A 93.082359 139.753220 +997 chr10 - 15820169 15902519 ENST00000477891.1 14 2329 MSTRG.173 FAM188A 32.711163 49.112312 +998 chr10 - 15820853 15824334 ENST00000476912.1 2 469 MSTRG.173 FAM188A 3.858670 5.793381 +999 chr10 - 15820853 15902519 MSTRG.173.4 13 1528 MSTRG.173 . 26.808538 40.250156 +1000 chr10 - 15830827 15879317 ENST00000418767.1 7 986 MSTRG.173 FAM188A 8.585159 12.889699 diff -r 298d81e5e138 -r d3377a16d881 test-data/ASP14_doxycycline_2.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ASP14_doxycycline_2.tabular Wed Jan 14 09:30:42 2026 +0000 @@ -0,0 +1,1001 @@ +t_id chr strand start end t_name num_exons length gene_id gene_name cov FPKM +1 chr10 + 90652 92824 ENST00000416477.1 6 747 ENSG00000237297.1 RP11-631M21.6 0.000000 0.000000 +2 chr10 - 92828 96173 ENST00000447903.2 4 2273 MSTRG.1 TUBB8 0.000000 0.000000 +3 chr10 - 92832 95347 ENST00000309812.4 4 1669 MSTRG.1 TUBB8 0.000000 0.000000 +4 chr10 - 92860 96173 MSTRG.1.3 4 2409 MSTRG.1 . 0.000000 0.000000 +5 chr10 - 93434 95347 ENST00000332708.5 3 958 MSTRG.1 TUBB8 0.000000 0.000000 +6 chr10 - 93518 120103 ENST00000413237.3 5 1968 MSTRG.1 TUBB8 0.000000 0.000000 +7 chr10 - 93645 95347 ENST00000482075.1 3 934 MSTRG.1 TUBB8 0.000000 0.000000 +8 chr10 - 126334 132205 ENST00000423948.1 7 1312 ENSG00000232420.2 IL9RP2 0.000000 0.000000 +9 chr10 + 180359 300577 MSTRG.2.1 15 4363 MSTRG.2 . 16.705826 26.546362 +10 chr10 + 180405 283617 ENST00000439456.1 5 788 MSTRG.2 ZMYND11 0.000000 0.000000 +11 chr10 + 180424 295201 ENST00000381602.4 14 2287 MSTRG.2 ZMYND11 0.000000 0.000000 +12 chr10 + 180424 300577 ENST00000309776.4 15 4404 MSTRG.2 ZMYND11 32.461979 51.583649 +13 chr10 + 180643 295201 ENST00000509513.2 14 2065 MSTRG.2 ZMYND11 1.597874 2.539099 +14 chr10 + 180643 300577 MSTRG.2.5 14 4433 MSTRG.2 . 38.024357 60.422531 +15 chr10 + 180742 300577 ENST00000397959.3 13 3831 MSTRG.2 ZMYND11 18.533684 29.450916 +16 chr10 + 180742 300577 MSTRG.2.7 14 3924 MSTRG.2 . 57.818035 91.875641 +17 chr10 + 181009 300577 ENST00000381591.1 15 4229 MSTRG.2 ZMYND11 69.100494 109.804016 +18 chr10 + 181424 300577 ENST00000381607.4 14 3909 MSTRG.2 ZMYND11 9.623902 15.292844 +19 chr10 + 181424 300577 ENST00000403354.1 13 3831 MSTRG.2 ZMYND11 5.873708 9.333604 +20 chr10 + 181449 300577 ENST00000402736.1 14 3953 MSTRG.2 ZMYND11 8.221348 13.064117 +21 chr10 + 181449 300577 MSTRG.2.12 15 4046 MSTRG.2 . 68.136765 108.272598 +22 chr10 - 200771 200883 ENST00000391029.1 1 113 MSTRG.3 RNA5SP297 0.000000 0.000000 +23 chr10 + 225930 300577 ENST00000602682.1 12 3744 MSTRG.2 ZMYND11 17.080246 27.141335 +24 chr10 + 225933 300577 ENST00000381604.4 15 4091 MSTRG.2 ZMYND11 2.388996 3.796229 +25 chr10 + 225934 283617 ENST00000397955.2 6 673 MSTRG.2 ZMYND11 0.000000 0.000000 +26 chr10 + 225934 300577 ENST00000381584.1 15 4090 MSTRG.2 ZMYND11 26.719284 42.458229 +27 chr10 + 225953 295201 ENST00000558098.2 13 1859 MSTRG.2 ZMYND11 0.000000 0.000000 +28 chr10 + 255833 300577 ENST00000545619.1 11 3616 MSTRG.2 ZMYND11 1.174925 1.867012 +29 chr10 + 255891 300577 ENST00000535374.1 10 3492 MSTRG.2 ZMYND11 28.156216 44.741581 +30 chr10 + 285902 292939 ENST00000488275.1 4 581 MSTRG.2 ZMYND11 2.534698 4.027757 +31 chr10 + 290411 294548 ENST00000473115.1 4 680 MSTRG.2 ZMYND11 2.763863 4.391912 +32 chr10 - 309144 309545 MSTRG.4.1 2 247 MSTRG.4 . 0.000000 0.000000 +33 chr10 - 320130 735683 ENST00000280886.6 37 7971 MSTRG.5 DIP2C 69.299042 110.119522 +34 chr10 - 320192 735683 MSTRG.5.2 38 8077 MSTRG.5 . 17.186779 27.310619 +35 chr10 - 320204 566221 MSTRG.5.5 39 7926 MSTRG.5 . 0.000000 0.000000 +36 chr10 - 320204 644381 MSTRG.5.3 39 7922 MSTRG.5 . 0.000000 0.000000 +37 chr10 - 320204 644381 MSTRG.5.4 37 7724 MSTRG.5 . 0.000000 0.000000 +38 chr10 + 323124 323248 ENST00000579524.1 1 125 MSTRG.6 AL603831.1 0.000000 0.000000 +39 chr10 - 327955 328065 ENST00000364991.1 1 111 MSTRG.7 RNA5SP298 0.000000 0.000000 +40 chr10 - 370579 375541 ENST00000434695.2 3 721 MSTRG.5 DIP2C 1.019969 1.620780 +41 chr10 - 401488 629900 ENST00000381496.3 26 4205 MSTRG.5 DIP2C 0.000000 0.000000 +42 chr10 - 402180 419130 ENST00000540204.1 8 1358 MSTRG.5 DIP2C 0.000000 0.000000 +43 chr10 - 410902 433749 ENST00000421992.1 7 731 MSTRG.5 DIP2C 0.000000 0.000000 +44 chr10 - 476181 476444 ENST00000470784.2 1 264 MSTRG.8 RN7SL754P 0.000000 0.000000 +45 chr10 + 483501 487110 ENST00000425723.2 2 558 MSTRG.9 RP11-490E15.2 0.000000 0.000000 +46 chr10 - 486811 735683 ENST00000423550.1 5 727 MSTRG.5 DIP2C 0.000000 0.000000 +47 chr10 + 674578 677195 ENST00000451601.1 2 1657 MSTRG.10 RP11-809C18.3 0.000000 0.000000 +48 chr10 - 687629 687718 ENST00000578903.1 1 90 MSTRG.11 MIR5699 0.000000 0.000000 +49 chr10 + 695888 698593 ENST00000441152.2 3 2249 MSTRG.12 PRR26 0.000000 0.000000 +50 chr10 + 696017 711109 ENST00000381489.5 3 2838 MSTRG.12 PRR26 0.000000 0.000000 +51 chr10 + 709498 712562 ENST00000443662.1 2 550 MSTRG.12 RP11-809C18.5 0.000000 0.000000 +52 chr10 + 714400 715521 ENST00000608587.1 1 1122 MSTRG.13 RP11-809C18.4 0.000000 0.000000 +53 chr10 + 789932 790898 ENST00000412695.1 2 424 ENSG00000231601.1 RP11-164C1.2 0.000000 0.000000 +54 chr10 - 855213 936689 MSTRG.14.2 18 6075 MSTRG.14 . 0.000000 0.000000 +55 chr10 - 855213 977680 MSTRG.14.1 18 8034 MSTRG.14 . 8.509968 13.522749 +56 chr10 - 855482 977680 MSTRG.14.3 18 5953 MSTRG.14 . 92.837784 147.523712 +57 chr10 - 855482 977680 MSTRG.14.4 19 7836 MSTRG.14 . 8.546453 13.580727 +58 chr10 - 855484 931702 ENST00000316157.3 17 5640 MSTRG.14 LARP4B 0.000000 0.000000 +59 chr10 - 857746 866870 ENST00000609318.1 4 4848 MSTRG.14 LARP4B 1.650936 2.623417 +60 chr10 - 858446 871256 ENST00000448368.1 6 1510 MSTRG.14 LARP4B 2.007583 3.190146 +61 chr10 - 860382 863829 ENST00000608970.1 3 699 MSTRG.14 LARP4B 2.229409 3.542638 +62 chr10 - 860702 861655 ENST00000469487.1 2 859 MSTRG.14 LARP4B 0.000000 0.000000 +63 chr10 - 909683 977680 ENST00000476529.1 6 853 MSTRG.14 LARP4B 0.000000 0.000000 +64 chr10 - 909719 977680 ENST00000406525.2 6 797 MSTRG.14 LARP4B 0.000000 0.000000 +65 chr10 - 910094 977680 ENST00000481118.1 5 685 MSTRG.14 LARP4B 0.000000 0.000000 +66 chr10 - 910181 949455 ENST00000412411.1 5 432 MSTRG.14 LARP4B 0.000000 0.000000 +67 chr10 + 978966 988683 ENST00000435531.1 3 407 ENSG00000229869.1 RP11-363N22.2 0.000000 0.000000 +68 chr10 - 1017097 1034281 ENST00000381466.1 2 1875 ENSG00000205740.1 AL359878.1 0.000000 0.000000 +69 chr10 + 1034338 1065876 ENST00000360803.4 17 4696 MSTRG.15 GTPBP4 260.685791 414.242279 +70 chr10 + 1034402 1056460 ENST00000491635.1 11 2223 MSTRG.15 GTPBP4 17.095716 27.165918 +71 chr10 + 1034402 1065876 ENST00000538293.1 16 4528 MSTRG.15 GTPBP4 0.000000 0.000000 +72 chr10 + 1034646 1043248 ENST00000360059.5 5 756 MSTRG.15 GTPBP4 0.000000 0.000000 +73 chr10 + 1034655 1065876 ENST00000545048.1 17 4800 MSTRG.15 GTPBP4 107.848740 171.376831 +74 chr10 + 1051778 1053260 ENST00000491261.1 2 373 MSTRG.15 GTPBP4 5.127032 8.147100 +75 chr10 + 1058340 1065876 ENST00000483839.2 4 3335 MSTRG.15 GTPBP4 2.573201 4.088940 +76 chr10 - 1064847 1071799 ENST00000277517.1 5 1359 MSTRG.16 IDI2 0.000000 0.000000 +77 chr10 + 1068606 1090138 ENST00000536039.1 3 893 MSTRG.17 IDI2-AS1 0.000000 0.000000 +78 chr10 + 1068608 1090138 ENST00000420381.1 5 1187 MSTRG.17 IDI2-AS1 0.000000 0.000000 +79 chr10 + 1068608 1090138 ENST00000428780.2 4 1054 MSTRG.17 IDI2-AS1 0.000000 0.000000 +80 chr10 + 1068614 1081916 ENST00000434470.1 3 490 MSTRG.17 IDI2-AS1 0.000000 0.000000 +81 chr10 - 1085848 1095110 ENST00000381344.3 5 2301 MSTRG.18 IDI1 291.384003 463.023224 +82 chr10 - 1086843 1095110 ENST00000491735.1 4 1133 MSTRG.18 IDI1 10.977642 17.444002 +83 chr10 - 1088233 1088295 ENST00000459467.1 1 63 MSTRG.19 RNU7-163P 5.587302 8.878492 +84 chr10 - 1088489 1094803 ENST00000427898.1 3 907 MSTRG.18 IDI1 1.888516 3.000943 +85 chr10 - 1088572 1095110 ENST00000429642.1 4 1304 MSTRG.18 IDI1 2.474758 3.932509 +86 chr10 - 1088617 1095110 ENST00000482091.1 3 1264 MSTRG.18 IDI1 10.336736 16.425570 +87 chr10 + 1095478 1178557 ENST00000358220.1 14 4902 MSTRG.20 WDR37 1.538368 2.444541 +88 chr10 - 1095714 1102356 MSTRG.21.1 3 4349 MSTRG.21 . 6.150342 9.773190 +89 chr10 - 1096197 1102356 MSTRG.21.2 2 4097 MSTRG.21 . 10.640073 16.907589 +90 chr10 - 1096232 1100338 MSTRG.21.3 2 1740 MSTRG.21 . 1.664031 2.644225 +91 chr10 + 1102293 1178557 MSTRG.20.2 14 4826 MSTRG.20 . 0.000000 0.000000 +92 chr10 + 1102344 1142566 ENST00000381329.1 9 1307 MSTRG.20 WDR37 3.644711 5.791621 +93 chr10 + 1102344 1178557 MSTRG.20.3 14 4962 MSTRG.20 . 8.054183 12.798485 +94 chr10 + 1102382 1178557 MSTRG.20.5 14 4921 MSTRG.20 . 18.576464 29.518896 +95 chr10 + 1102420 1178557 MSTRG.20.6 13 4708 MSTRG.20 . 3.409241 5.417449 +96 chr10 + 1102713 1178557 MSTRG.20.7 14 4997 MSTRG.20 . 18.062338 28.701925 +97 chr10 + 1102713 1178557 MSTRG.20.8 14 4908 MSTRG.20 . 16.874331 26.814123 +98 chr10 + 1102743 1178557 MSTRG.20.9 12 4498 MSTRG.20 . 7.179796 11.409041 +99 chr10 + 1102750 1178557 MSTRG.20.10 12 4580 MSTRG.20 . 7.271785 11.555217 +100 chr10 + 1102763 1178557 MSTRG.20.11 14 4855 MSTRG.20 . 17.144062 27.242741 +101 chr10 + 1102798 1178557 ENST00000263150.4 14 4909 MSTRG.20 WDR37 11.025998 17.520842 +102 chr10 + 1120323 1142186 ENST00000436154.1 8 714 MSTRG.20 WDR37 0.000000 0.000000 +103 chr10 + 1169747 1178557 ENST00000482165.1 4 3951 MSTRG.20 WDR37 1.411334 2.242678 +104 chr10 + 1205708 1210612 ENST00000425630.1 3 2434 ENSG00000229205.2 LINC00200 0.000000 0.000000 +105 chr10 + 1205744 1206937 ENST00000583117.1 2 632 ENSG00000229205.2 LINC00200 0.000000 0.000000 +106 chr10 - 1228073 1779670 ENST00000381312.1 10 3606 MSTRG.22 ADARB2 0.000000 0.000000 +107 chr10 - 1228074 1246325 ENST00000381310.3 3 1835 MSTRG.22 ADARB2 0.000000 0.000000 +108 chr10 - 1228785 1232506 ENST00000474762.1 3 768 MSTRG.22 ADARB2 0.000000 0.000000 +109 chr10 - 1228983 1234186 ENST00000490172.1 3 599 MSTRG.22 ADARB2 0.000000 0.000000 +110 chr10 - 1229091 1246325 ENST00000381305.1 4 703 MSTRG.22 ADARB2 0.000000 0.000000 +111 chr10 - 1245386 1246325 ENST00000477140.1 2 697 MSTRG.22 ADARB2 0.000000 0.000000 +112 chr10 - 1261616 1282593 ENST00000469464.1 3 1741 MSTRG.22 ADARB2 1.195926 1.900384 +113 chr10 - 1403196 1403832 ENST00000432987.1 2 359 MSTRG.23 RP11-398B16.2 0.000000 0.000000 +114 chr10 + 1568832 1599179 ENST00000421697.2 2 637 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +115 chr10 + 1568958 1577868 ENST00000381301.3 3 625 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +116 chr10 - 2047667 2056542 ENST00000413603.1 3 2097 ENSG00000234962.1 LINC00700 0.000000 0.000000 +117 chr10 - 2054459 2056542 ENST00000438372.1 3 777 ENSG00000234962.1 LINC00700 0.000000 0.000000 +118 chr10 - 2054847 2055605 ENST00000454424.1 2 484 ENSG00000234962.1 LINC00700 0.000000 0.000000 +119 chr10 + 2114039 2123291 ENST00000435539.1 2 432 ENSG00000226694.2 RP11-69C17.2 0.000000 0.000000 +120 chr10 + 2140361 2140463 ENST00000517189.1 1 103 ENSG00000252998.1 RNU6-889P 0.000000 0.000000 +121 chr10 + 2208526 2211654 ENST00000421077.1 2 2321 ENSG00000227912.1 RP11-69C17.3 0.000000 0.000000 +122 chr10 - 2211334 2231668 ENST00000418524.2 5 587 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +123 chr10 - 2211341 2218626 ENST00000436003.2 2 196 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +124 chr10 + 2241581 2241682 ENST00000390854.1 1 102 ENSG00000212156.1 RNU6-576P 0.000000 0.000000 +125 chr10 - 2347277 2357269 ENST00000418295.1 3 742 ENSG00000234556.1 LINC00701 0.000000 0.000000 +126 chr10 - 2488447 2489546 ENST00000414107.1 2 756 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +127 chr10 - 2488447 2489546 ENST00000441907.1 2 764 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +128 chr10 - 2488452 2489546 ENST00000439973.1 2 714 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +129 chr10 - 2495329 2495418 ENST00000580586.1 1 90 ENSG00000264261.1 AC024908.1 0.000000 0.000000 +130 chr10 + 2541913 2542762 ENST00000431209.1 2 332 ENSG00000237500.1 RP11-526P5.1 0.000000 0.000000 +131 chr10 + 2543975 2609431 ENST00000438753.1 2 918 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +132 chr10 + 2543995 2579817 ENST00000437289.1 2 320 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +133 chr10 + 2978213 2978633 ENST00000419388.1 1 421 ENSG00000231743.1 RP11-89K18.1 0.000000 0.000000 +134 chr10 + 3052723 3055303 ENST00000439575.1 3 608 ENSG00000234182.1 RP11-118K6.2 0.000000 0.000000 +135 chr10 - 3107576 3109169 MSTRG.25.1 2 1232 MSTRG.25 . 1.201670 1.909512 +136 chr10 - 3107616 3108582 ENST00000607898.1 1 967 MSTRG.25 RP11-118K6.3 4.368711 6.942092 +137 chr10 + 3108525 3143746 ENST00000607886.1 4 432 MSTRG.26 PFKP 0.000000 0.000000 +138 chr10 + 3109712 3178985 ENST00000381125.4 22 2645 MSTRG.26 PFKP 886.491882 1408.678345 +139 chr10 + 3109864 3111581 ENST00000495715.1 2 152 MSTRG.26 PFKP 0.000000 0.000000 +140 chr10 + 3110819 3178985 ENST00000381075.2 24 2769 MSTRG.26 PFKP 1.117904 1.776403 +141 chr10 + 3111425 3146136 ENST00000421751.1 5 665 MSTRG.26 PFKP 4.998899 7.943491 +142 chr10 + 3112437 3147693 ENST00000407806.2 7 733 MSTRG.26 PFKP 0.000000 0.000000 +143 chr10 + 3146916 3155710 ENST00000415005.1 8 1142 MSTRG.26 PFKP 5.663424 8.999454 +144 chr10 + 3146939 3151672 ENST00000468050.1 6 511 MSTRG.26 PFKP 0.000000 0.000000 +145 chr10 + 3147071 3149501 ENST00000460445.1 3 628 MSTRG.26 PFKP 2.833507 4.502579 +146 chr10 + 3155650 3172175 ENST00000413079.1 5 538 MSTRG.26 PFKP 7.564445 12.020267 +147 chr10 + 3171199 3178985 ENST00000381072.1 6 1698 MSTRG.26 PFKP 12.963472 20.599583 +148 chr10 + 3175427 3179904 ENST00000433193.1 4 453 MSTRG.26 PFKP 2.643326 4.200372 +149 chr10 - 3179920 3180807 ENST00000490510.1 2 778 MSTRG.27 PITRM1 2.993899 4.757450 +150 chr10 - 3179920 3191591 ENST00000464395.1 9 3240 MSTRG.27 PITRM1 58.241043 92.547829 +151 chr10 - 3179920 3215003 MSTRG.27.1 25 3258 MSTRG.27 . 207.674438 330.004700 +152 chr10 - 3179922 3215003 ENST00000224949.4 27 3454 MSTRG.27 PITRM1 261.279327 415.185455 +153 chr10 - 3179922 3215003 ENST00000380989.2 27 3457 MSTRG.27 PITRM1 88.703140 140.953568 +154 chr10 - 3179926 3200345 ENST00000380994.1 16 2645 MSTRG.27 PITRM1 7.511549 11.936213 +155 chr10 - 3180016 3215003 ENST00000451104.2 24 3059 MSTRG.27 PITRM1 0.000000 0.000000 +156 chr10 - 3180883 3186558 ENST00000455371.1 4 673 MSTRG.27 PITRM1 3.014834 4.790716 +157 chr10 - 3183700 3190255 ENST00000451454.1 7 883 MSTRG.27 PITRM1 7.070848 11.235918 +158 chr10 + 3183824 3206477 ENST00000601046.1 4 577 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +159 chr10 + 3183824 3210164 ENST00000598280.1 4 601 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +160 chr10 + 3183864 3190814 ENST00000441377.1 4 3998 MSTRG.28 PITRM1-AS1 1.584230 2.517418 +161 chr10 + 3185241 3190814 ENST00000430356.2 3 3823 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +162 chr10 - 3185675 3187908 ENST00000424714.1 3 489 MSTRG.27 PITRM1 4.735440 7.524842 +163 chr10 - 3193368 3201234 ENST00000430362.1 6 802 MSTRG.27 PITRM1 1.630963 2.591679 +164 chr10 - 3205324 3207526 ENST00000488065.1 2 851 MSTRG.27 PITRM1 6.746887 10.721128 +165 chr10 + 3266008 3269599 ENST00000445932.1 3 597 ENSG00000236968.1 RP11-298E9.5 0.000000 0.000000 +166 chr10 - 3282563 3299466 ENST00000417149.1 4 454 MSTRG.29 RP11-298E9.6 0.000000 0.000000 +167 chr10 + 3291138 3291944 MSTRG.30.1 2 618 MSTRG.30 . 1.113269 1.769038 +168 chr10 + 3308195 3309207 ENST00000436340.1 2 463 ENSG00000227338.1 RP11-195B3.1 0.000000 0.000000 +169 chr10 - 3474575 3478062 MSTRG.31.1 3 2349 MSTRG.31 . 6.008940 9.548495 +170 chr10 + 3494616 3543443 MSTRG.32.1 2 851 MSTRG.32 . 2.542891 4.040776 +171 chr10 - 3529086 3545030 ENST00000413993.1 5 832 MSTRG.33 RP11-482E14.1 0.000000 0.000000 +172 chr10 - 3574286 3579223 ENST00000426811.1 2 430 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +173 chr10 - 3577304 3579049 ENST00000413757.1 2 372 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +174 chr10 - 3599384 3614279 MSTRG.34.1 3 496 MSTRG.34 . 1.405242 2.232997 +175 chr10 - 3710520 3710836 MSTRG.35.1 1 317 MSTRG.35 . 1.006309 1.599074 +176 chr10 + 3793259 3805418 ENST00000421629.2 6 759 ENSG00000229672.2 RP11-184A2.3 0.000000 0.000000 +177 chr10 + 3810107 3810943 ENST00000415358.1 2 313 ENSG00000228353.1 RP11-184A2.2 0.000000 0.000000 +178 chr10 - 3818188 3822421 ENST00000461124.1 3 776 MSTRG.36 KLF6 0.000000 0.000000 +179 chr10 - 3818188 3827473 ENST00000497571.1 4 4662 MSTRG.36 KLF6 584.908081 929.447083 +180 chr10 - 3818189 3827473 ENST00000542957.1 3 4537 MSTRG.36 KLF6 284.980591 452.847870 +181 chr10 - 3821239 3824406 ENST00000173785.4 3 1088 MSTRG.36 KLF6 1.549775 2.462667 +182 chr10 - 3821742 3823832 ENST00000492125.1 2 1576 MSTRG.36 KLF6 37.857975 60.158150 +183 chr10 - 3822519 3827473 ENST00000469435.1 2 2257 MSTRG.36 KLF6 39.974010 63.520630 +184 chr10 - 3824000 3827473 ENST00000380946.3 3 842 MSTRG.36 KLF6 4.900860 7.787703 +185 chr10 + 3827756 3829407 MSTRG.37.1 1 1652 MSTRG.37 . 1.023002 1.625600 +186 chr10 + 3876142 3876920 ENST00000413339.1 2 536 ENSG00000230573.1 RP11-464C19.2 0.000000 0.000000 +187 chr10 + 3976711 3978005 ENST00000432452.2 2 591 ENSG00000226005.3 RP11-464C19.3 0.000000 0.000000 +188 chr10 + 4067132 4070586 ENST00000455525.1 2 633 ENSG00000227101.1 RP11-433J20.2 0.000000 0.000000 +189 chr10 + 4093918 4131205 ENST00000455199.1 4 2287 ENSG00000236990.1 RP11-433J20.1 0.000000 0.000000 +190 chr10 - 4243333 4286104 ENST00000608792.1 3 6300 MSTRG.38 LINC00702 13.718229 21.798927 +191 chr10 - 4277752 4285879 ENST00000454470.1 2 407 MSTRG.38 LINC00702 4.731789 7.519041 +192 chr10 - 4277752 4286104 MSTRG.38.2 3 497 MSTRG.38 . 3.125779 4.967013 +193 chr10 - 4285142 4285981 ENST00000418372.1 2 446 MSTRG.38 LINC00702 10.826925 17.204506 +194 chr10 + 4289424 4299004 MSTRG.39.1 2 1122 MSTRG.39 . 17.302139 27.493933 +195 chr10 + 4426438 4452804 ENST00000454152.1 2 2390 ENSG00000224382.1 LINC00703 0.000000 0.000000 +196 chr10 + 4448694 4451443 ENST00000434902.1 2 869 ENSG00000224382.1 LINC00703 0.000000 0.000000 +197 chr10 - 4457497 4468371 ENST00000420082.1 4 691 ENSG00000230096.1 RP11-34C15.2 0.000000 0.000000 +198 chr10 + 4557144 4557249 ENST00000384396.1 1 106 ENSG00000207124.1 RNU6-163P 0.000000 0.000000 +199 chr10 - 4621911 4720444 MSTRG.40.1 3 2062 MSTRG.40 . 3.742178 5.946501 +200 chr10 - 4692377 4720444 ENST00000430998.2 4 1576 MSTRG.40 LINC00704 5.851576 9.298436 +201 chr10 - 4693295 4699117 ENST00000443994.1 3 543 MSTRG.40 LINC00704 2.422735 3.849842 +202 chr10 - 4693353 4720444 ENST00000449712.1 5 823 MSTRG.40 LINC00704 0.000000 0.000000 +203 chr10 + 4697619 4704611 ENST00000417883.2 3 1745 MSTRG.41 LINC00705 0.000000 0.000000 +204 chr10 - 4728501 4729798 MSTRG.42.1 3 423 MSTRG.42 . 1.536643 2.441800 +205 chr10 - 4787905 4809844 MSTRG.43.1 3 4588 MSTRG.43 . 1.305061 2.073805 +206 chr10 - 4787905 4823145 MSTRG.43.2 3 3442 MSTRG.43 . 2.039804 3.241347 +207 chr10 - 4788110 4809844 MSTRG.43.4 3 2522 MSTRG.43 . 0.000000 0.000000 +208 chr10 - 4788110 4823145 MSTRG.43.3 3 1354 MSTRG.43 . 0.000000 0.000000 +209 chr10 - 4790140 4809844 MSTRG.43.5 2 3691 MSTRG.43 . 0.000000 0.000000 +210 chr10 - 4799235 4809844 MSTRG.43.6 2 3857 MSTRG.43 . 1.184243 1.881819 +211 chr10 + 4828821 4879775 ENST00000533295.1 6 754 MSTRG.44 AKR1E2 0.000000 0.000000 +212 chr10 + 4828901 4882018 ENST00000462718.3 6 693 MSTRG.44 AKR1E2 0.000000 0.000000 +213 chr10 + 4868330 4890575 MSTRG.44.3 7 2727 MSTRG.44 . 0.000000 0.000000 +214 chr10 + 4868359 4883976 MSTRG.44.4 6 3318 MSTRG.44 . 3.050440 4.847296 +215 chr10 + 4868369 4890575 ENST00000474119.1 10 1947 MSTRG.44 AKR1E2 0.000000 0.000000 +216 chr10 + 4868426 4890575 ENST00000463345.1 10 1976 MSTRG.44 AKR1E2 2.373500 3.771606 +217 chr10 + 4868430 4889491 MSTRG.44.7 7 861 MSTRG.44 . 1.440055 2.288317 +218 chr10 + 4868446 4890575 ENST00000298375.7 10 1887 MSTRG.44 AKR1E2 4.256743 6.764170 +219 chr10 + 4868447 4888733 ENST00000525281.1 6 1383 MSTRG.44 AKR1E2 0.000000 0.000000 +220 chr10 + 4868478 4879773 ENST00000525627.1 3 334 MSTRG.44 AKR1E2 0.000000 0.000000 +221 chr10 + 4868488 4888733 MSTRG.44.16 9 3214 MSTRG.44 . 0.000000 0.000000 +222 chr10 + 4868488 4889491 ENST00000532248.1 7 847 MSTRG.44 AKR1E2 0.000000 0.000000 +223 chr10 + 4868488 4889491 MSTRG.44.11 8 1894 MSTRG.44 . 4.497838 7.147281 +224 chr10 + 4868488 4890575 ENST00000334019.4 8 1674 MSTRG.44 AKR1E2 1.500882 2.384974 +225 chr10 + 4868488 4890575 ENST00000345253.5 7 1551 MSTRG.44 AKR1E2 0.000000 0.000000 +226 chr10 + 4868488 4890575 MSTRG.44.12 8 2029 MSTRG.44 . 1.308647 2.079503 +227 chr10 + 4868488 4890575 MSTRG.44.13 10 1897 MSTRG.44 . 0.000000 0.000000 +228 chr10 + 4868488 4995278 MSTRG.44.14 15 2744 MSTRG.44 . 2.335550 3.711301 +229 chr10 + 4868488 4995278 MSTRG.44.17 14 1627 MSTRG.44 . 0.000000 0.000000 +230 chr10 + 4868488 5025475 MSTRG.44.15 20 9882 MSTRG.44 . 2.330488 3.703258 +231 chr10 + 4875547 4888733 ENST00000441590.1 5 1218 MSTRG.44 AKR1E2 0.000000 0.000000 +232 chr10 + 4875592 4884049 ENST00000525572.1 5 506 MSTRG.44 AKR1E2 0.000000 0.000000 +233 chr10 + 4881976 4889679 ENST00000487985.1 4 523 MSTRG.44 AKR1E2 0.000000 0.000000 +234 chr10 - 4914093 4934167 ENST00000432950.1 9 983 MSTRG.45 AKR1C6P 0.000000 0.000000 +235 chr10 - 4927673 4934167 ENST00000281339.5 5 495 MSTRG.45 AKR1C6P 0.000000 0.000000 +236 chr10 + 4934796 5025475 ENST00000434459.2 14 7354 MSTRG.44 AKR1C1 0.000000 0.000000 +237 chr10 - 5004628 5004760 ENST00000459095.1 1 133 MSTRG.46 U8 0.000000 0.000000 +238 chr10 + 5005445 5025475 ENST00000380872.4 9 6705 MSTRG.44 AKR1C1 1.781415 2.830754 +239 chr10 + 5005445 5025475 ENST00000477661.1 8 7970 MSTRG.44 AKR1C1 0.000000 0.000000 +240 chr10 + 5005641 5014941 ENST00000442997.1 7 746 MSTRG.44 AKR1C1 0.000000 0.000000 +241 chr10 + 5005981 5012133 ENST00000380859.1 6 858 MSTRG.44 AKR1C1 0.000000 0.000000 +242 chr10 + 5007683 5010500 ENST00000476100.1 2 1973 MSTRG.44 AKR1C1 0.000000 0.000000 +243 chr10 - 5029967 5046215 ENST00000380753.4 9 3381 MSTRG.47 AKR1C2 0.000000 0.000000 +244 chr10 - 5029967 5060223 MSTRG.47.1 12 3914 MSTRG.47 . 2.084012 3.311595 +245 chr10 - 5030125 5060223 MSTRG.47.3 9 3083 MSTRG.47 . 0.000000 0.000000 +246 chr10 - 5031626 5046114 ENST00000421196.3 8 1543 MSTRG.47 AKR1C2 0.000000 0.000000 +247 chr10 - 5031966 5060223 ENST00000407674.1 11 1605 MSTRG.47 AKR1C2 0.000000 0.000000 +248 chr10 - 5031981 5046215 ENST00000460124.1 8 2639 MSTRG.47 AKR1C2 0.000000 0.000000 +249 chr10 + 5037680 5039586 ENST00000451575.2 3 445 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +250 chr10 - 5038026 5060223 ENST00000604507.1 7 821 MSTRG.47 AKR1C2 0.000000 0.000000 +251 chr10 + 5038074 5039586 ENST00000440414.1 3 316 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +252 chr10 - 5042103 5046114 ENST00000455190.1 4 1006 MSTRG.47 AKR1C2 0.000000 0.000000 +253 chr10 - 5042495 5046114 ENST00000604184.1 4 614 MSTRG.47 AKR1C2 0.000000 0.000000 +254 chr10 + 5046902 5047034 ENST00000459141.1 1 133 MSTRG.49 U8 0.000000 0.000000 +255 chr10 - 5048187 5060223 ENST00000604428.1 4 600 MSTRG.47 AKR1C2 0.000000 0.000000 +256 chr10 - 5048654 5060223 ENST00000604711.1 4 673 MSTRG.47 AKR1C2 0.000000 0.000000 +257 chr10 - 5052655 5058084 ENST00000603073.1 3 579 MSTRG.47 AKR1C2 0.000000 0.000000 +258 chr10 - 5055499 5057426 ENST00000604439.1 2 646 MSTRG.47 AKR1C2 0.000000 0.000000 +259 chr10 + 5077263 5149878 MSTRG.50.1 11 1895 MSTRG.50 . 32.091507 50.994949 +260 chr10 + 5077263 5149878 MSTRG.50.2 10 1725 MSTRG.50 . 20.995779 33.363304 +261 chr10 + 5077263 5149878 MSTRG.50.3 10 1739 MSTRG.50 . 16.667147 26.484898 +262 chr10 + 5077546 5144402 ENST00000605781.1 6 859 MSTRG.50 AKR1C3 105.087563 166.989197 +263 chr10 + 5077546 5149878 MSTRG.50.4 10 1412 MSTRG.50 . 147.916458 235.046371 +264 chr10 + 5077549 5139742 ENST00000470862.2 6 1013 MSTRG.50 AKR1C3 0.000000 0.000000 +265 chr10 + 5077550 5139742 ENST00000480822.1 5 808 MSTRG.50 AKR1C3 15.130700 24.043411 +266 chr10 - 5090055 5090173 ENST00000515931.1 1 119 MSTRG.51 U8 0.000000 0.000000 +267 chr10 + 5090981 5141641 ENST00000602997.1 6 671 MSTRG.50 AKR1C3 4.740484 7.532857 +268 chr10 + 5091004 5093862 ENST00000451627.1 2 125 MSTRG.50 RP11-499O7.4 0.000000 0.000000 +269 chr10 + 5119830 5149878 ENST00000605149.1 9 1411 MSTRG.50 AKR1C3 4.569381 7.260967 +270 chr10 + 5119973 5149878 ENST00000439082.2 9 1268 MSTRG.50 AKR1C3 12.345332 19.617327 +271 chr10 - 5135600 5135735 ENST00000459536.1 1 136 MSTRG.52 U8 0.000000 0.000000 +272 chr10 + 5135985 5149878 ENST00000380554.3 9 1807 MSTRG.50 AKR1C3 248.535355 394.934631 +273 chr10 + 5136606 5140368 ENST00000480697.2 3 1026 MSTRG.50 AKR1C3 4.297321 6.828650 +274 chr10 + 5136610 5142085 ENST00000605322.1 3 846 MSTRG.50 AKR1C3 5.304494 8.429096 +275 chr10 + 5138337 5139742 ENST00000603312.1 2 550 MSTRG.50 AKR1C3 4.564631 7.253418 +276 chr10 + 5147467 5149878 ENST00000603484.1 2 629 MSTRG.50 AKR1C3 3.122358 4.961577 +277 chr10 + 5152190 5156102 MSTRG.53.1 1 3913 MSTRG.53 . 0.000000 0.000000 +278 chr10 - 5164279 5177418 ENST00000427165.1 5 609 MSTRG.54 AKR1C5P 0.000000 0.000000 +279 chr10 - 5164295 5166124 MSTRG.54.2 3 1240 MSTRG.54 . 0.000000 0.000000 +280 chr10 - 5179314 5227150 MSTRG.55.1 10 1363 MSTRG.55 . 2.362436 3.754025 +281 chr10 - 5196335 5202333 ENST00000473890.1 5 645 MSTRG.55 AKR1CL1 0.000000 0.000000 +282 chr10 - 5196655 5202333 ENST00000465430.1 3 1716 MSTRG.55 AKR1CL1 0.000000 0.000000 +283 chr10 - 5202775 5227150 ENST00000472691.1 5 595 MSTRG.55 AKR1CL1 0.000000 0.000000 +284 chr10 - 5202775 5227150 ENST00000488756.1 4 539 MSTRG.55 AKR1CL1 0.000000 0.000000 +285 chr10 - 5202775 5326531 MSTRG.55.4 16 3182 MSTRG.55 . 0.000000 0.000000 +286 chr10 - 5203694 5227150 ENST00000334314.3 4 498 MSTRG.55 AKR1CL1 0.000000 0.000000 +287 chr10 - 5226975 5244449 ENST00000445191.1 2 81 MSTRG.55 AKR1CL1 0.000000 0.000000 +288 chr10 + 5237425 5238914 ENST00000469875.2 2 837 MSTRG.56 AKR1C4 0.000000 0.000000 +289 chr10 + 5237426 5260912 ENST00000380448.1 11 1414 MSTRG.56 AKR1C4 0.000000 0.000000 +290 chr10 - 5237847 5237936 ENST00000516100.1 1 90 MSTRG.57 U8 0.000000 0.000000 +291 chr10 + 5238798 5260912 ENST00000263126.1 9 1194 MSTRG.56 AKR1C4 0.000000 0.000000 +292 chr10 + 5249132 5249705 ENST00000441452.1 1 574 MSTRG.58 RP11-445P17.6 0.000000 0.000000 +293 chr10 - 5257183 5333847 MSTRG.55.9 13 4052 MSTRG.55 . 0.000000 0.000000 +294 chr10 + 5276321 5305371 ENST00000428920.2 2 680 MSTRG.59 RP11-445P17.3 0.000000 0.000000 +295 chr10 - 5305897 5333847 MSTRG.55.10 11 2734 MSTRG.55 . 0.000000 0.000000 +296 chr10 - 5305973 5333847 MSTRG.55.11 10 2491 MSTRG.55 . 2.542032 4.039412 +297 chr10 - 5306256 5326531 MSTRG.55.12 8 1358 MSTRG.55 . 0.000000 0.000000 +298 chr10 - 5307136 5326531 MSTRG.55.13 6 2330 MSTRG.55 . 1.802825 2.864776 +299 chr10 - 5307996 5313416 ENST00000449457.1 2 909 MSTRG.55 RP11-445P17.8 0.000000 0.000000 +300 chr10 - 5317136 5330433 ENST00000305623.8 8 895 MSTRG.55 AKR1C7P 0.000000 0.000000 +301 chr10 - 5317169 5327975 ENST00000432689.2 6 685 MSTRG.55 AKR1C7P 0.000000 0.000000 +302 chr10 - 5319027 5326531 MSTRG.55.17 4 1603 MSTRG.55 . 5.998774 9.532341 +303 chr10 - 5346394 5346828 ENST00000451325.1 1 435 ENSG00000223987.1 RP11-445P17.5 0.000000 0.000000 +304 chr10 + 5406972 5416169 ENST00000380433.3 2 714 ENSG00000178473.5 UCN3 0.000000 0.000000 +305 chr10 - 5435061 5446793 ENST00000380419.3 4 1798 MSTRG.60 TUBAL3 0.000000 0.000000 +306 chr10 - 5435232 5446793 ENST00000479328.1 4 1507 MSTRG.60 TUBAL3 0.000000 0.000000 +307 chr10 + 5454514 5500426 ENST00000355029.4 12 3402 MSTRG.61 NET1 89.097839 141.580765 +308 chr10 + 5455752 5500426 ENST00000542715.1 12 3184 MSTRG.61 NET1 0.000000 0.000000 +309 chr10 + 5488572 5494883 ENST00000486354.1 4 622 MSTRG.61 NET1 0.000000 0.000000 +310 chr10 + 5488572 5496485 ENST00000449083.1 4 637 MSTRG.61 NET1 0.000000 0.000000 +311 chr10 + 5488574 5500426 ENST00000380359.3 10 3253 MSTRG.61 NET1 30.302380 48.151943 +312 chr10 + 5494382 5495116 ENST00000465087.1 2 403 MSTRG.61 NET1 1.543249 2.452297 +313 chr10 + 5496344 5498493 ENST00000484741.1 3 757 MSTRG.61 NET1 0.000000 0.000000 +314 chr10 - 5540658 5541533 ENST00000380332.3 1 876 ENSG00000178372.6 CALML5 0.000000 0.000000 +315 chr10 - 5556207 5565140 ENST00000543008.1 2 4531 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +316 chr10 - 5559244 5568209 ENST00000542093.1 3 560 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +317 chr10 - 5559332 5568204 ENST00000545372.1 4 579 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +318 chr10 + 5566924 5568225 ENST00000315238.1 1 1302 ENSG00000178363.3 CALML3 0.000000 0.000000 +319 chr10 - 5566939 5567705 ENST00000442008.2 2 595 ENSG00000256462.1 RP11-116G8.5 0.000000 0.000000 +320 chr10 - 5592096 5592862 MSTRG.62.1 2 505 MSTRG.62 . 1.889109 3.001885 +321 chr10 - 5598987 5601960 MSTRG.63.1 3 464 MSTRG.63 . 2.693965 4.280840 +322 chr10 - 5636951 5638081 MSTRG.64.1 2 738 MSTRG.64 . 2.168862 3.446427 +323 chr10 - 5636954 5638081 ENST00000478294.1 2 697 MSTRG.64 RP13-463N16.6 10.426657 16.568460 +324 chr10 - 5650438 5652756 ENST00000425246.1 5 613 ENSG00000231483.1 RP11-336A10.5 0.000000 0.000000 +325 chr10 - 5658825 5660124 ENST00000427341.1 3 657 ENSG00000228951.1 RP11-336A10.4 0.000000 0.000000 +326 chr10 + 5666894 5667089 ENST00000441526.1 1 196 ENSG00000228685.1 RP11-336A10.7 0.000000 0.000000 +327 chr10 + 5673426 5673716 ENST00000495609.2 1 291 ENSG00000240577.2 RN7SL445P 0.000000 0.000000 +328 chr10 - 5680830 5683924 ENST00000493897.1 3 832 MSTRG.65 ASB13 0.000000 0.000000 +329 chr10 - 5680831 5708558 ENST00000357700.6 6 2716 MSTRG.65 ASB13 57.149845 90.813858 +330 chr10 - 5680831 5708558 ENST00000459912.1 7 2797 MSTRG.65 ASB13 0.000000 0.000000 +331 chr10 - 5680831 5708558 ENST00000479033.1 5 2565 MSTRG.65 ASB13 1.140118 1.811702 +332 chr10 - 5690935 5693531 ENST00000482921.1 2 489 MSTRG.65 ASB13 0.000000 0.000000 +333 chr10 + 5726801 5806473 ENST00000328090.5 21 9396 MSTRG.66 FAM208B 23.825567 37.859974 +334 chr10 + 5726801 5806473 MSTRG.66.1 24 9749 MSTRG.66 . 20.323685 32.295315 +335 chr10 + 5726801 5806473 MSTRG.66.2 23 9657 MSTRG.66 . 23.564362 37.444904 +336 chr10 + 5726801 5806473 MSTRG.66.3 21 9226 MSTRG.66 . 19.469715 30.938316 +337 chr10 + 5726801 5806473 MSTRG.66.4 24 9644 MSTRG.66 . 18.667225 29.663120 +338 chr10 + 5726801 5806473 MSTRG.66.5 20 9134 MSTRG.66 . 20.813938 33.074352 +339 chr10 + 5726801 5806473 MSTRG.66.6 22 9511 MSTRG.66 . 20.154051 32.025757 +340 chr10 + 5726801 5806473 MSTRG.66.7 23 9498 MSTRG.66 . 18.157598 28.853298 +341 chr10 + 5726905 5754502 ENST00000477043.1 3 514 MSTRG.66 FAM208B 0.000000 0.000000 +342 chr10 + 5726905 5756170 ENST00000473789.1 4 537 MSTRG.66 FAM208B 0.000000 0.000000 +343 chr10 + 5726911 5762631 ENST00000496681.1 4 522 MSTRG.66 FAM208B 0.000000 0.000000 +344 chr10 + 5726928 5762631 ENST00000480839.2 5 597 MSTRG.66 FAM208B 0.000000 0.000000 +345 chr10 + 5734779 5754881 ENST00000532424.1 4 479 MSTRG.66 FAM208B 0.000000 0.000000 +346 chr10 + 5741411 5751626 ENST00000482419.1 2 424 MSTRG.66 FAM208B 0.000000 0.000000 +347 chr10 + 5741456 5756170 ENST00000463468.1 4 560 MSTRG.66 FAM208B 0.000000 0.000000 +348 chr10 + 5751589 5756537 ENST00000527124.1 3 574 MSTRG.66 FAM208B 6.162882 9.793117 +349 chr10 - 5754137 5786030 ENST00000411512.2 2 736 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +350 chr10 - 5754383 5756386 ENST00000596567.1 2 945 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +351 chr10 + 5768789 5773166 ENST00000532080.1 3 912 MSTRG.66 FAM208B 1.185189 1.883322 +352 chr10 + 5772625 5782460 ENST00000380270.3 2 1422 MSTRG.66 FAM208B 0.000000 0.000000 +353 chr10 + 5800892 5803764 ENST00000487196.1 2 576 MSTRG.66 FAM208B 0.000000 0.000000 +354 chr10 + 5802803 5806473 ENST00000459693.1 2 2611 MSTRG.66 FAM208B 1.432330 2.276041 +355 chr10 - 5807186 5855512 ENST00000380191.4 11 2412 MSTRG.68 GDI2 2049.746338 3257.145752 +356 chr10 - 5807192 5811352 ENST00000479928.1 3 2499 MSTRG.68 GDI2 14.143758 22.475111 +357 chr10 - 5807812 5827944 ENST00000447751.1 6 893 MSTRG.68 GDI2 54.534718 86.658295 +358 chr10 - 5807884 5855512 ENST00000380132.4 12 1797 MSTRG.68 GDI2 53.869919 85.601898 +359 chr10 - 5807917 5855512 ENST00000380181.3 10 1546 MSTRG.68 GDI2 129.162766 205.245850 +360 chr10 - 5815805 5855512 ENST00000456041.1 7 1080 MSTRG.68 GDI2 9.649193 15.333033 +361 chr10 + 5818034 5818821 ENST00000603087.1 1 788 MSTRG.69 NRBF2P5 0.000000 0.000000 +362 chr10 - 5827829 5855512 ENST00000418688.1 4 756 MSTRG.68 GDI2 1.069064 1.698794 +363 chr10 - 5827945 5856292 ENST00000608581.1 5 634 MSTRG.68 GDI2 18.570879 29.510021 +364 chr10 - 5827969 5884095 ENST00000380127.1 7 584 MSTRG.68 GDI2 0.000000 0.000000 +365 chr10 - 5836871 5855512 ENST00000609712.1 5 739 MSTRG.68 GDI2 5.033591 7.998618 +366 chr10 + 5855610 5858572 MSTRG.70.1 1 2963 MSTRG.70 . 3.468889 5.512232 +367 chr10 + 5855948 5858572 ENST00000608273.1 2 2444 MSTRG.70 RP11-318E3.9 0.000000 0.000000 +368 chr10 - 5902878 5931954 MSTRG.71.1 8 3707 MSTRG.71 . 5.470044 8.692163 +369 chr10 - 5902878 5931954 MSTRG.71.2 9 3232 MSTRG.71 . 6.088904 9.675561 +370 chr10 - 5902878 5931954 MSTRG.71.3 9 3684 MSTRG.71 . 8.785335 13.960320 +371 chr10 - 5903580 5931954 ENST00000380094.5 8 2831 MSTRG.71 ANKRD16 3.153466 5.011010 +372 chr10 - 5903768 5904654 ENST00000430852.1 2 586 MSTRG.71 RP11-318E3.4 0.000000 0.000000 +373 chr10 - 5918136 5931954 MSTRG.71.6 8 2285 MSTRG.71 . 0.000000 0.000000 +374 chr10 - 5920050 5931954 ENST00000380092.4 7 1766 MSTRG.71 ANKRD16 2.915279 4.632518 +375 chr10 - 5920085 5931954 ENST00000191063.8 6 1652 MSTRG.71 ANKRD16 3.507359 5.573362 +376 chr10 - 5924666 5930030 ENST00000492368.1 4 838 MSTRG.71 ANKRD16 1.248764 1.984346 +377 chr10 + 5931535 5979556 ENST00000397269.3 22 3665 MSTRG.72 FBXO18 0.000000 0.000000 +378 chr10 + 5932194 5979556 ENST00000362091.4 21 3560 MSTRG.72 FBXO18 77.613853 123.332146 +379 chr10 + 5932211 5953091 ENST00000470089.1 5 1153 MSTRG.72 FBXO18 3.319462 5.274785 +380 chr10 + 5932211 5979168 MSTRG.72.3 22 3206 MSTRG.72 . 16.843466 26.765078 +381 chr10 + 5932243 5948595 ENST00000462507.1 4 917 MSTRG.72 FBXO18 0.000000 0.000000 +382 chr10 + 5932243 5969504 MSTRG.72.7 20 2993 MSTRG.72 . 20.548735 32.652931 +383 chr10 + 5932243 5979556 MSTRG.72.5 20 3355 MSTRG.72 . 76.079124 120.893387 +384 chr10 + 5932243 5979556 MSTRG.72.6 23 4178 MSTRG.72 . 55.361023 87.971336 +385 chr10 + 5933788 5969504 MSTRG.72.9 19 8474 MSTRG.72 . 32.519424 51.674931 +386 chr10 + 5936349 5979556 ENST00000379999.5 22 3702 MSTRG.72 FBXO18 0.000000 0.000000 +387 chr10 + 5945129 5951257 ENST00000469009.1 5 943 MSTRG.72 FBXO18 1.156430 1.837623 +388 chr10 + 5948469 5951441 ENST00000494526.1 3 578 MSTRG.72 FBXO18 1.724905 2.740957 +389 chr10 + 5956141 5957907 ENST00000460453.1 2 634 MSTRG.72 FBXO18 7.917181 12.580782 +390 chr10 + 5959025 5959639 ENST00000489042.1 2 533 MSTRG.72 FBXO18 1.933203 3.071953 +391 chr10 + 5963309 5966471 ENST00000475867.1 3 1022 MSTRG.72 FBXO18 4.074639 6.474797 +392 chr10 + 5963317 5979168 ENST00000461504.1 9 912 MSTRG.72 FBXO18 9.967685 15.839131 +393 chr10 + 5965534 5969504 ENST00000485290.1 4 557 MSTRG.72 FBXO18 0.000000 0.000000 +394 chr10 + 5967227 5969504 ENST00000496013.1 2 336 MSTRG.72 FBXO18 0.000000 0.000000 +395 chr10 + 5967374 5970636 ENST00000479433.1 3 527 MSTRG.72 FBXO18 0.000000 0.000000 +396 chr10 + 5967374 5971829 ENST00000470353.1 3 681 MSTRG.72 FBXO18 1.571074 2.496512 +397 chr10 - 5976233 5987876 ENST00000397264.4 2 3499 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +398 chr10 - 5977257 5987876 MSTRG.73.2 2 615 MSTRG.73 . 2.314639 3.678073 +399 chr10 + 5978596 5979556 ENST00000481029.1 2 486 MSTRG.72 FBXO18 0.000000 0.000000 +400 chr10 - 5985453 5987876 ENST00000448685.1 2 685 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +401 chr10 - 5985467 5987876 ENST00000454321.1 2 545 MSTRG.73 RP11-536K7.3 1.627735 2.586549 +402 chr10 - 5990855 6002530 ENST00000435171.2 4 659 MSTRG.74 IL15RA 0.000000 0.000000 +403 chr10 - 5990898 6010891 MSTRG.74.2 6 5050 MSTRG.74 . 1.574885 2.502568 +404 chr10 - 5990898 6010891 MSTRG.74.3 7 5029 MSTRG.74 . 1.102129 1.751336 +405 chr10 - 5990938 6019177 MSTRG.74.5 6 5123 MSTRG.74 . 6.005974 9.543782 +406 chr10 - 5990938 6020150 MSTRG.74.4 8 5520 MSTRG.74 . 6.967500 11.071693 +407 chr10 - 5994142 6020150 MSTRG.74.6 7 2163 MSTRG.74 . 6.041915 9.600894 +408 chr10 - 5994334 6019739 ENST00000379977.3 7 1812 MSTRG.74 IL15RA 5.482951 8.712673 +409 chr10 - 5994335 6019739 ENST00000397248.2 7 1811 MSTRG.74 IL15RA 5.070690 8.057571 +410 chr10 - 5994335 6019739 ENST00000397251.3 6 1616 MSTRG.74 IL15RA 1.432171 2.275789 +411 chr10 - 5994344 6020150 ENST00000525219.2 7 1841 MSTRG.74 IL15RA 4.969723 7.897130 +412 chr10 - 5994349 6020150 ENST00000534292.1 7 1836 MSTRG.74 IL15RA 4.467148 7.098513 +413 chr10 - 5994356 6020150 ENST00000379972.2 6 1631 MSTRG.74 IL15RA 0.000000 0.000000 +414 chr10 - 5994356 6020150 ENST00000532948.1 6 1730 MSTRG.74 IL15RA 3.821658 6.072798 +415 chr10 - 5994756 6019739 ENST00000528354.1 6 1291 MSTRG.74 IL15RA 0.000000 0.000000 +416 chr10 - 5994784 6005801 ENST00000447291.1 5 912 MSTRG.74 IL15RA 0.000000 0.000000 +417 chr10 - 5994861 6020150 ENST00000379974.1 5 1030 MSTRG.74 IL15RA 0.000000 0.000000 +418 chr10 - 5995008 6008302 ENST00000532039.1 6 679 MSTRG.74 IL15RA 0.000000 0.000000 +419 chr10 - 5995014 6019739 ENST00000397250.2 5 838 MSTRG.74 IL15RA 0.000000 0.000000 +420 chr10 - 5995115 6019739 ENST00000379971.1 5 857 MSTRG.74 IL15RA 0.000000 0.000000 +421 chr10 - 5995223 6019739 ENST00000397255.3 7 1043 MSTRG.74 IL15RA 0.000000 0.000000 +422 chr10 - 5995223 6019739 ENST00000530685.1 6 944 MSTRG.74 IL15RA 0.000000 0.000000 +423 chr10 - 5998341 6020150 ENST00000397246.3 7 1180 MSTRG.74 IL15RA 0.000000 0.000000 +424 chr10 - 6001717 6019739 ENST00000429135.2 4 801 MSTRG.74 IL15RA 0.000000 0.000000 +425 chr10 - 6002358 6019177 ENST00000453922.1 4 730 MSTRG.74 IL15RA 0.000000 0.000000 +426 chr10 - 6052652 6104288 ENST00000379959.3 8 3176 ENSG00000134460.11 IL2RA 0.000000 0.000000 +427 chr10 - 6054034 6104272 ENST00000379954.1 7 1562 ENSG00000134460.11 IL2RA 0.000000 0.000000 +428 chr10 - 6054760 6104253 ENST00000256876.6 8 1006 ENSG00000134460.11 IL2RA 0.000000 0.000000 +429 chr10 - 6059017 6059157 ENST00000516113.1 1 141 ENSG00000251922.1 SNORA14 0.000000 0.000000 +430 chr10 - 6061416 6067964 ENST00000447847.1 3 326 ENSG00000134460.11 IL2RA 0.000000 0.000000 +431 chr10 + 6067941 6078390 ENST00000440436.1 3 480 ENSG00000229664.1 RP11-536K7.5 0.000000 0.000000 +432 chr10 - 6113477 6113881 ENST00000397237.2 1 405 ENSG00000214015.3 RP11-414H17.2 0.000000 0.000000 +433 chr10 + 6130950 6159420 ENST00000379888.4 12 3332 MSTRG.75 RBM17 117.169121 186.187378 +434 chr10 + 6130962 6159420 MSTRG.75.2 12 4027 MSTRG.75 . 124.985115 198.607361 +435 chr10 + 6131017 6154324 ENST00000437845.2 7 873 MSTRG.75 RBM17 0.000000 0.000000 +436 chr10 + 6131034 6152090 ENST00000432931.1 7 842 MSTRG.75 RBM17 0.000000 0.000000 +437 chr10 + 6131309 6159420 ENST00000446108.1 12 3751 MSTRG.75 RBM17 0.000000 0.000000 +438 chr10 + 6138873 6152090 ENST00000418631.1 6 860 MSTRG.75 RBM17 2.343063 3.723240 +439 chr10 + 6146909 6148340 ENST00000467214.1 2 389 MSTRG.75 RBM17 12.588202 20.003260 +440 chr10 + 6146934 6154664 ENST00000447032.1 5 916 MSTRG.75 RBM17 45.778282 72.743896 +441 chr10 + 6150451 6154664 ENST00000481147.1 3 889 MSTRG.75 RBM17 15.377993 24.436371 +442 chr10 + 6154665 6159420 ENST00000476706.1 5 2618 MSTRG.75 RBM17 13.433390 21.346304 +443 chr10 + 6155326 6159420 ENST00000465906.1 3 2537 MSTRG.75 RBM17 12.112776 19.247786 +444 chr10 + 6155870 6159420 ENST00000467080.1 2 2460 MSTRG.75 RBM17 1.759334 2.795666 +445 chr10 + 6156110 6159420 ENST00000496762.1 2 3170 MSTRG.75 RBM17 2.801610 4.451893 +446 chr10 + 6171977 6172984 MSTRG.76.1 2 758 MSTRG.76 . 4.601583 7.312137 +447 chr10 + 6186881 6277495 ENST00000536985.1 12 3923 MSTRG.77 PFKFB3 1.451384 2.306319 +448 chr10 + 6186897 6277495 ENST00000379789.4 15 4157 MSTRG.77 PFKFB3 42.922760 68.206329 +449 chr10 + 6188279 6277495 ENST00000540253.1 15 4258 MSTRG.77 PFKFB3 0.000000 0.000000 +450 chr10 + 6191586 6191903 ENST00000364711.1 1 318 MSTRG.78 RN7SKP78 0.000000 0.000000 +451 chr10 + 6194159 6194240 ENST00000577482.1 1 82 MSTRG.79 MIR3155A 0.000000 0.000000 +452 chr10 - 6239575 6244656 ENST00000427630.1 2 438 MSTRG.80 RP11-414H17.5 0.000000 0.000000 +453 chr10 + 6244829 6270258 ENST00000317350.4 15 2010 MSTRG.77 PFKFB3 2.336724 3.713167 +454 chr10 + 6244829 6270258 ENST00000461744.1 16 2098 MSTRG.77 PFKFB3 2.182393 3.467928 +455 chr10 + 6244829 6277495 ENST00000379785.1 17 4623 MSTRG.77 PFKFB3 0.000000 0.000000 +456 chr10 + 6244829 6277495 ENST00000467491.1 18 4711 MSTRG.77 PFKFB3 0.000000 0.000000 +457 chr10 + 6244829 6277495 ENST00000477914.1 16 4636 MSTRG.77 PFKFB3 13.423911 21.331242 +458 chr10 + 6244829 6277495 ENST00000490474.1 17 4659 MSTRG.77 PFKFB3 9.754256 15.499983 +459 chr10 + 6244840 6273277 ENST00000379782.3 16 1974 MSTRG.77 PFKFB3 0.000000 0.000000 +460 chr10 + 6244863 6277495 ENST00000360521.2 16 4537 MSTRG.77 PFKFB3 85.135399 135.284256 +461 chr10 + 6244894 6277495 ENST00000379775.4 15 4483 MSTRG.77 PFKFB3 344.724762 547.784241 +462 chr10 + 6263367 6277495 ENST00000450232.1 5 3020 MSTRG.77 PFKFB3 12.206081 19.396051 +463 chr10 + 6264671 6268410 ENST00000487989.1 4 661 MSTRG.77 PFKFB3 4.961694 7.884370 +464 chr10 + 6266129 6277495 ENST00000414237.1 5 2955 MSTRG.77 PFKFB3 1.320094 2.097693 +465 chr10 + 6266129 6277495 ENST00000441697.1 2 2686 MSTRG.77 PFKFB3 6.902914 10.969063 +466 chr10 + 6266129 6277495 ENST00000475881.1 4 2978 MSTRG.77 PFKFB3 2.889349 4.591314 +467 chr10 - 6287694 6287794 ENST00000459607.1 1 101 ENSG00000238366.1 Y_RNA 0.000000 0.000000 +468 chr10 + 6319650 6377944 ENST00000399868.2 7 3086 MSTRG.81 RP11-563J2.2 1.046986 1.663711 +469 chr10 - 6335063 6336647 ENST00000440192.1 4 890 MSTRG.82 SDCBPP1 0.000000 0.000000 +470 chr10 + 6392278 6394723 ENST00000391437.1 1 2446 ENSG00000212743.1 DKFZP667F0711 0.000000 0.000000 +471 chr10 - 6469105 6622263 ENST00000263125.5 18 3285 MSTRG.83 PRKCQ 0.000000 0.000000 +472 chr10 - 6469134 6622263 ENST00000397176.2 17 3067 MSTRG.83 PRKCQ 0.000000 0.000000 +473 chr10 - 6469983 6622263 ENST00000539722.1 17 2346 MSTRG.83 PRKCQ 0.000000 0.000000 +474 chr10 + 6622381 6626261 ENST00000445427.1 2 1133 MSTRG.84 PRKCQ-AS1 1.061088 1.686120 +475 chr10 + 6622387 6626079 ENST00000455810.1 3 1009 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +476 chr10 + 6625638 6627674 ENST00000414894.1 2 398 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +477 chr10 + 6625641 6626261 ENST00000449648.1 2 422 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +478 chr10 + 6625767 6630358 ENST00000607982.1 3 677 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +479 chr10 + 6625767 6633059 ENST00000608526.1 5 666 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +480 chr10 + 6628186 6628882 ENST00000561822.1 1 697 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +481 chr10 + 6649249 6657912 ENST00000609627.1 3 378 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +482 chr10 + 6649283 6657921 ENST00000607996.1 5 531 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +483 chr10 + 6650310 6658414 ENST00000609346.1 4 938 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +484 chr10 + 6650338 6658359 ENST00000608453.1 3 587 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +485 chr10 + 6660678 6667308 ENST00000448835.2 4 500 ENSG00000225948.2 RP11-554I8.1 0.000000 0.000000 +486 chr10 + 6779344 6780988 ENST00000417112.1 2 917 MSTRG.85 RP11-554I8.2 0.000000 0.000000 +487 chr10 - 6816341 6821132 MSTRG.86.1 2 617 MSTRG.86 . 2.679092 4.257206 +488 chr10 + 6821558 6884868 MSTRG.87.1 4 5454 MSTRG.87 . 4.585797 7.287052 +489 chr10 + 6821560 6884868 ENST00000436383.1 5 3070 MSTRG.87 LINC00707 2.221194 3.529584 +490 chr10 - 6867825 6868186 ENST00000451996.1 1 362 MSTRG.88 AL392086.1 1.016575 1.615387 +491 chr10 - 6933419 6962434 ENST00000457632.1 3 299 ENSG00000234248.1 RP11-799O21.2 0.000000 0.000000 +492 chr10 - 7100287 7100507 MSTRG.89.1 1 221 MSTRG.89 . 0.000000 0.000000 +493 chr10 + 7139114 7139637 ENST00000420049.1 2 436 ENSG00000223581.1 RP11-393K12.2 0.000000 0.000000 +494 chr10 + 7196082 7196198 ENST00000604136.1 1 117 ENSG00000270811.1 RP11-393K12.4 0.000000 0.000000 +495 chr10 - 7200586 7451303 ENST00000361972.4 21 7922 MSTRG.90 SFMBT2 0.000000 0.000000 +496 chr10 - 7200586 7452983 MSTRG.90.1 21 7852 MSTRG.90 . 13.284186 21.109211 +497 chr10 - 7200586 7452983 MSTRG.90.2 21 8043 MSTRG.90 . 10.784484 17.137066 +498 chr10 - 7200600 7452983 MSTRG.90.4 21 8049 MSTRG.90 . 0.000000 0.000000 +499 chr10 - 7204249 7453450 ENST00000397167.1 21 4363 MSTRG.90 SFMBT2 0.000000 0.000000 +500 chr10 - 7326144 7453450 ENST00000379713.3 5 2404 MSTRG.90 SFMBT2 0.000000 0.000000 +501 chr10 - 7337068 7337252 ENST00000421389.1 1 185 MSTRG.91 RP5-1092K5.2 0.000000 0.000000 +502 chr10 - 7390104 7450707 ENST00000379711.2 5 692 MSTRG.90 SFMBT2 0.000000 0.000000 +503 chr10 - 7390249 7453450 ENST00000397160.3 5 678 MSTRG.90 SFMBT2 0.000000 0.000000 +504 chr10 - 7487520 7513904 ENST00000420395.1 4 557 ENSG00000232591.1 RP5-1031D4.2 0.000000 0.000000 +505 chr10 - 7528665 7528771 ENST00000384722.1 1 107 ENSG00000207453.1 RNU6-535P 0.000000 0.000000 +506 chr10 + 7575169 7578527 ENST00000414631.1 3 714 ENSG00000230121.1 RP11-385N23.1 0.000000 0.000000 +507 chr10 - 7601232 7708961 ENST00000256861.6 14 6749 MSTRG.92 ITIH5 0.000000 0.000000 +508 chr10 - 7601756 7708961 ENST00000397146.2 12 2194 MSTRG.92 ITIH5 0.000000 0.000000 +509 chr10 - 7604386 7664440 ENST00000298441.6 10 5734 MSTRG.92 ITIH5 0.000000 0.000000 +510 chr10 - 7605045 7708961 ENST00000446830.2 14 2936 MSTRG.92 ITIH5 0.000000 0.000000 +511 chr10 - 7608000 7612363 ENST00000473591.1 3 782 MSTRG.92 ITIH5 0.000000 0.000000 +512 chr10 - 7611125 7618854 ENST00000492668.1 3 1116 MSTRG.92 ITIH5 0.000000 0.000000 +513 chr10 - 7613368 7682818 ENST00000434980.1 9 2727 MSTRG.92 ITIH5 0.000000 0.000000 +514 chr10 - 7613368 7708961 ENST00000397145.2 12 3132 MSTRG.92 ITIH5 0.000000 0.000000 +515 chr10 - 7614735 7620667 ENST00000468389.1 3 1393 MSTRG.92 ITIH5 0.000000 0.000000 +516 chr10 - 7614735 7664440 ENST00000476417.1 6 6945 MSTRG.92 ITIH5 0.000000 0.000000 +517 chr10 - 7618855 7659245 ENST00000461751.1 7 999 MSTRG.92 ITIH5 0.000000 0.000000 +518 chr10 + 7745232 7791483 ENST00000358415.4 21 3193 ENSG00000151655.13 ITIH2 0.000000 0.000000 +519 chr10 + 7745309 7755346 ENST00000473227.1 5 654 ENSG00000151655.13 ITIH2 0.000000 0.000000 +520 chr10 + 7745331 7762864 ENST00000480387.1 6 573 ENSG00000151655.13 ITIH2 0.000000 0.000000 +521 chr10 + 7745343 7763660 ENST00000429820.1 7 767 ENSG00000151655.13 ITIH2 0.000000 0.000000 +522 chr10 + 7745363 7791302 ENST00000379587.4 20 2848 ENSG00000151655.13 ITIH2 0.000000 0.000000 +523 chr10 + 7771828 7774436 ENST00000477751.1 3 591 ENSG00000151655.13 ITIH2 0.000000 0.000000 +524 chr10 - 7792925 7829990 ENST00000379562.4 13 6394 MSTRG.93 KIN 21.728493 34.527622 +525 chr10 - 7795188 7808066 ENST00000498098.1 6 817 MSTRG.93 KIN 0.000000 0.000000 +526 chr10 - 7795188 7829990 MSTRG.93.2 14 3782 MSTRG.93 . 7.246812 11.515532 +527 chr10 - 7795188 7829990 MSTRG.93.3 13 3687 MSTRG.93 . 6.811386 10.823620 +528 chr10 - 7795188 7829990 MSTRG.93.4 13 3684 MSTRG.93 . 7.316925 11.626946 +529 chr10 - 7795276 7829990 ENST00000535925.1 14 1618 MSTRG.93 KIN 8.006538 12.722775 +530 chr10 - 7797777 7808347 ENST00000463666.1 6 699 MSTRG.93 KIN 0.000000 0.000000 +531 chr10 - 7797798 7808347 ENST00000471320.1 5 910 MSTRG.93 KIN 0.000000 0.000000 +532 chr10 - 7801234 7829990 ENST00000543003.1 11 1737 MSTRG.93 KIN 1.952744 3.103004 +533 chr10 - 7803196 7816854 ENST00000460089.1 6 626 MSTRG.93 KIN 0.000000 0.000000 +534 chr10 + 7830092 7849778 ENST00000356708.7 10 1163 MSTRG.94 ATP5C1 323.679962 514.343079 +535 chr10 + 7830110 7849778 ENST00000493053.1 9 1110 MSTRG.94 ATP5C1 8.079430 12.838603 +536 chr10 + 7830122 7838551 ENST00000462760.1 2 573 MSTRG.94 ATP5C1 0.000000 0.000000 +537 chr10 + 7830138 7839009 ENST00000460362.1 3 565 MSTRG.94 ATP5C1 0.000000 0.000000 +538 chr10 + 7830140 7844838 ENST00000541227.1 7 907 MSTRG.94 ATP5C1 4.554031 7.236575 +539 chr10 + 7830140 7849778 ENST00000335698.4 9 1078 MSTRG.94 ATP5C1 1562.113892 2482.274170 +540 chr10 + 7830142 7849778 ENST00000465936.1 4 314 MSTRG.94 ATP5C1 0.000000 0.000000 +541 chr10 + 7830147 7844388 ENST00000460820.2 7 763 MSTRG.94 ATP5C1 0.000000 0.000000 +542 chr10 + 7830173 7841513 ENST00000472202.1 4 782 MSTRG.94 ATP5C1 24.135801 38.352951 +543 chr10 + 7842015 7849778 ENST00000473809.1 6 544 MSTRG.94 ATP5C1 3.357323 5.334948 +544 chr10 + 7844206 7849778 ENST00000480528.1 4 474 MSTRG.94 ATP5C1 2.704615 4.297764 +545 chr10 + 7860467 8058947 ENST00000344293.5 7 5229 MSTRG.95 TAF3 20.899988 33.211086 +546 chr10 + 7860475 8058947 MSTRG.95.2 7 5218 MSTRG.95 . 7.893247 12.542749 +547 chr10 - 7875581 7875920 ENST00000440219.1 1 340 MSTRG.96 RP11-401E9.3 1.164706 1.850774 +548 chr10 - 8092413 8095447 ENST00000355358.1 2 2214 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +549 chr10 - 8092439 8094458 ENST00000420815.1 3 650 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +550 chr10 - 8092439 8094458 ENST00000438755.1 3 675 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +551 chr10 + 8093504 8095047 ENST00000418270.1 3 402 ENSG00000232638.1 RP11-379F12.4 0.000000 0.000000 +552 chr10 - 8094205 8095219 ENST00000417359.1 2 565 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +553 chr10 - 8094206 8095412 ENST00000458727.1 2 820 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +554 chr10 + 8095567 8097859 ENST00000481743.1 2 785 MSTRG.97 GATA3 0.000000 0.000000 +555 chr10 + 8095567 8117161 MSTRG.97.1 6 3054 MSTRG.97 . 1.807896 2.872834 +556 chr10 + 8095593 8117161 MSTRG.97.3 6 3025 MSTRG.97 . 0.000000 0.000000 +557 chr10 + 8096656 8117161 ENST00000379328.3 6 3078 MSTRG.97 GATA3 0.000000 0.000000 +558 chr10 + 8096769 8117161 ENST00000346208.3 6 2962 MSTRG.97 GATA3 0.000000 0.000000 +559 chr10 + 8100362 8117161 ENST00000461472.1 3 2029 MSTRG.97 GATA3 0.000000 0.000000 +560 chr10 + 8203223 8204155 ENST00000451976.1 1 933 ENSG00000225053.1 PRPF38AP1 0.000000 0.000000 +561 chr10 - 8301294 8302767 ENST00000454056.1 2 365 ENSG00000232170.1 LINC00708 0.000000 0.000000 +562 chr10 - 8301294 8310268 ENST00000428165.1 5 916 ENSG00000232170.1 LINC00708 0.000000 0.000000 +563 chr10 + 8340860 8343630 ENST00000413941.1 2 901 ENSG00000226861.1 RP5-1119O21.2 0.000000 0.000000 +564 chr10 + 8442823 8503826 ENST00000413286.1 4 430 ENSG00000226990.1 RP11-543F8.2 0.000000 0.000000 +565 chr10 + 8514682 8514915 ENST00000603398.1 1 234 ENSG00000271251.1 RP11-543F8.3 0.000000 0.000000 +566 chr10 - 8555650 8557069 ENST00000451609.1 1 1420 ENSG00000213771.3 KRT8P37 0.000000 0.000000 +567 chr10 + 8661896 8662571 ENST00000425516.1 1 676 ENSG00000236420.1 CHCHD3P1 0.000000 0.000000 +568 chr10 - 8698679 8698794 ENST00000391203.1 1 116 ENSG00000212505.1 RNA5SP299 0.000000 0.000000 +569 chr10 + 8765973 8766251 ENST00000605632.1 1 279 ENSG00000270234.1 RP11-575N15.1 0.000000 0.000000 +570 chr10 + 8939952 8956559 ENST00000447297.1 4 366 ENSG00000234752.1 RP11-428L9.1 0.000000 0.000000 +571 chr10 + 9012088 9015431 ENST00000456526.1 2 677 ENSG00000223808.1 RP11-428L9.2 0.000000 0.000000 +572 chr10 + 9317796 9329020 ENST00000458168.1 2 494 ENSG00000230014.1 LINC00709 0.000000 0.000000 +573 chr10 - 9763926 9766379 ENST00000450068.1 1 2454 ENSG00000235838.1 HSP90AB7P 0.000000 0.000000 +574 chr10 - 9800746 9801200 ENST00000419836.1 2 344 ENSG00000228636.1 RP5-1051H14.2 0.000000 0.000000 +575 chr10 + 10100685 10105465 ENST00000429539.1 4 575 ENSG00000224788.1 RP5-933E2.1 0.000000 0.000000 +576 chr10 + 10216193 10216528 ENST00000535261.1 1 336 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +577 chr10 + 10216193 10216540 ENST00000439303.1 1 348 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +578 chr10 + 10274574 10274675 ENST00000363979.1 1 102 ENSG00000200849.1 Y_RNA 0.000000 0.000000 +579 chr10 - 10299132 10299429 ENST00000606426.1 1 298 ENSG00000272436.1 CUX2P1 0.000000 0.000000 +580 chr10 - 10407143 10408450 ENST00000455871.1 2 335 ENSG00000234306.1 RP11-271F18.1 0.000000 0.000000 +581 chr10 - 10461501 10504312 ENST00000602311.1 4 505 ENSG00000270111.1 RP11-271F18.4 0.000000 0.000000 +582 chr10 - 10818186 10818624 ENST00000448495.1 1 439 ENSG00000228997.1 RP1-186E20.1 0.000000 0.000000 +583 chr10 - 10826400 10836959 ENST00000415590.2 4 656 MSTRG.98 SFTA1P 1.128667 1.793506 +584 chr10 - 10826400 10836959 ENST00000602763.1 4 636 MSTRG.98 SFTA1P 1.654186 2.628581 +585 chr10 - 10826401 10836959 ENST00000434919.2 3 481 MSTRG.98 SFTA1P 0.000000 0.000000 +586 chr10 - 10826402 10836959 ENST00000446372.2 4 775 MSTRG.98 SFTA1P 2.097927 3.333707 +587 chr10 - 10826413 10836959 MSTRG.98.5 4 784 MSTRG.98 . 1.934488 3.073995 +588 chr10 - 10969021 10988765 ENST00000600516.1 6 659 ENSG00000229240.3 LINC00710 0.000000 0.000000 +589 chr10 - 10976487 10994058 ENST00000428520.2 6 1460 ENSG00000229240.3 LINC00710 0.000000 0.000000 +590 chr10 - 10976903 10978626 ENST00000441855.1 2 514 ENSG00000229240.3 LINC00710 0.000000 0.000000 +591 chr10 - 10988010 10994143 ENST00000596092.1 5 1025 ENSG00000229240.3 LINC00710 0.000000 0.000000 +592 chr10 - 10988011 10994197 ENST00000601050.2 6 994 ENSG00000229240.3 LINC00710 0.000000 0.000000 +593 chr10 - 10988821 10994058 ENST00000450174.2 3 873 ENSG00000229240.3 LINC00710 0.000000 0.000000 +594 chr10 - 10989127 10994129 ENST00000598573.1 2 666 ENSG00000229240.3 LINC00710 0.000000 0.000000 +595 chr10 + 11002114 11012779 ENST00000420825.1 3 537 ENSG00000231496.1 RP1-251M9.2 0.000000 0.000000 +596 chr10 + 11047259 11378666 ENST00000379261.4 14 9233 ENSG00000048740.13 CELF2 0.000000 0.000000 +597 chr10 + 11047351 11373245 ENST00000416382.2 14 2398 ENSG00000048740.13 CELF2 0.000000 0.000000 +598 chr10 - 11052127 11053082 ENST00000437825.1 2 244 ENSG00000228027.1 RP1-251M9.3 0.000000 0.000000 +599 chr10 + 11059893 11378666 ENST00000450189.1 15 7982 ENSG00000048740.13 CELF2 0.000000 0.000000 +600 chr10 + 11060053 11373245 ENST00000542579.1 14 2437 ENSG00000048740.13 CELF2 0.000000 0.000000 +601 chr10 + 11060106 11373245 ENST00000399850.3 14 2384 ENSG00000048740.13 CELF2 0.000000 0.000000 +602 chr10 + 11060106 11373245 ENST00000417956.2 14 2378 ENSG00000048740.13 CELF2 0.000000 0.000000 +603 chr10 + 11072297 11072831 ENST00000428853.2 2 433 ENSG00000229206.2 RP11-397O4.1 0.000000 0.000000 +604 chr10 - 11117094 11140436 ENST00000432370.2 4 853 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +605 chr10 - 11139277 11140123 ENST00000420634.1 2 144 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +606 chr10 + 11206993 11376357 ENST00000354440.2 13 7121 ENSG00000048740.13 CELF2 0.000000 0.000000 +607 chr10 + 11206993 11378666 ENST00000427450.1 15 8036 ENSG00000048740.13 CELF2 0.000000 0.000000 +608 chr10 + 11206993 11378674 ENST00000315874.4 14 8080 ENSG00000048740.13 CELF2 0.000000 0.000000 +609 chr10 + 11207103 11372602 ENST00000608830.1 14 1892 ENSG00000048740.13 CELF2 0.000000 0.000000 +610 chr10 + 11207447 11371252 ENST00000609870.1 10 1549 ENSG00000048740.13 CELF2 0.000000 0.000000 +611 chr10 + 11207447 11373240 ENST00000609692.1 12 2210 ENSG00000048740.13 CELF2 0.000000 0.000000 +612 chr10 + 11207449 11371242 ENST00000354897.3 13 1754 ENSG00000048740.13 CELF2 0.000000 0.000000 +613 chr10 + 11207491 11371055 ENST00000537122.1 11 1406 ENSG00000048740.13 CELF2 0.000000 0.000000 +614 chr10 - 11210885 11213339 ENST00000417273.1 2 430 ENSG00000230322.1 RP3-323N1.2 0.000000 0.000000 +615 chr10 - 11358797 11361847 ENST00000379256.3 2 2468 ENSG00000181800.5 CELF2-AS1 0.000000 0.000000 +616 chr10 - 11495945 11653753 ENST00000609104.1 15 11377 MSTRG.99 USP6NL 56.241283 89.370110 +617 chr10 - 11502509 11574274 ENST00000277575.5 14 4512 MSTRG.99 USP6NL 2.307028 3.665979 +618 chr10 - 11502509 11615840 ENST00000379237.2 14 4650 MSTRG.99 USP6NL 1.473204 2.340992 +619 chr10 - 11605186 11615604 ENST00000443016.1 2 2600 MSTRG.99 USP6NL 11.818350 18.779926 +620 chr10 - 11606126 11615840 ENST00000609853.1 2 1748 MSTRG.99 USP6NL 0.000000 0.000000 +621 chr10 - 11606126 11653753 ENST00000606752.1 3 1911 MSTRG.99 USP6NL 22.466799 35.700829 +622 chr10 + 11653304 11654226 ENST00000604634.1 1 923 MSTRG.100 RP11-138I18.1 0.000000 0.000000 +623 chr10 + 11721674 11722513 ENST00000604086.1 1 840 MSTRG.101 RP11-138I18.2 1.182143 1.878482 +624 chr10 + 11784365 11806069 ENST00000379215.4 5 1649 MSTRG.102 ECHDC3 24.067448 38.244331 +625 chr10 + 11784365 11806069 ENST00000496136.1 6 1767 MSTRG.102 ECHDC3 9.524833 15.135417 +626 chr10 + 11784445 11797607 ENST00000420401.1 4 881 MSTRG.102 ECHDC3 1.898869 3.017394 +627 chr10 + 11789274 11806069 ENST00000422887.1 4 1342 MSTRG.102 ECHDC3 1.812882 2.880757 +628 chr10 + 11789449 11800341 ENST00000495787.1 3 3117 MSTRG.102 ECHDC3 7.863848 12.496034 +629 chr10 + 11865338 11908782 ENST00000474155.1 4 735 MSTRG.103 PROSER2 2.083722 3.311135 +630 chr10 + 11865397 11914276 ENST00000277570.5 4 3333 MSTRG.103 PROSER2 11.875981 18.871506 +631 chr10 + 11873682 11908782 ENST00000444604.1 3 612 MSTRG.103 PROSER2 0.000000 0.000000 +632 chr10 - 11886804 11936699 MSTRG.104.1 5 7842 MSTRG.104 . 23.877703 37.942822 +633 chr10 - 11886873 11936699 MSTRG.104.2 7 8043 MSTRG.104 . 8.418868 13.377987 +634 chr10 - 11891612 11936699 ENST00000445498.1 6 3141 MSTRG.104 PROSER2-AS1 2.084360 3.312148 +635 chr10 - 11899288 11916794 ENST00000453242.1 4 475 MSTRG.104 PROSER2-AS1 0.000000 0.000000 +636 chr10 + 11911643 11914276 ENST00000379200.1 1 2634 MSTRG.103 PROSER2 0.000000 0.000000 +637 chr10 - 11962021 12077896 ENST00000356352.2 21 5569 MSTRG.105 UPF2 0.000000 0.000000 +638 chr10 - 11962021 12084833 ENST00000357604.5 22 5193 MSTRG.105 UPF2 138.608841 220.256119 +639 chr10 - 11962022 12085169 ENST00000397053.2 22 5369 MSTRG.105 UPF2 2.375305 3.774474 +640 chr10 + 11965180 11965287 ENST00000516148.1 1 108 MSTRG.106 RNU6-1095P 0.000000 0.000000 +641 chr10 - 12077058 12085169 ENST00000460569.1 2 640 MSTRG.105 UPF2 0.000000 0.000000 +642 chr10 + 12110960 12165505 MSTRG.107.1 16 5286 MSTRG.107 . 11.264146 17.899269 +643 chr10 + 12110971 12165505 ENST00000263035.4 17 5440 MSTRG.107 DHTKD1 55.141590 87.622643 +644 chr10 + 12111023 12133683 ENST00000437298.1 5 974 MSTRG.107 DHTKD1 0.000000 0.000000 +645 chr10 + 12123523 12139995 ENST00000465617.1 4 811 MSTRG.107 DHTKD1 0.000000 0.000000 +646 chr10 + 12131174 12136300 ENST00000415935.1 3 482 MSTRG.107 DHTKD1 0.000000 0.000000 +647 chr10 + 12136259 12155063 ENST00000448829.1 6 822 MSTRG.107 DHTKD1 0.000000 0.000000 +648 chr10 - 12158279 12158378 ENST00000606801.1 1 100 MSTRG.108 U6 0.000000 0.000000 +649 chr10 + 12160778 12162358 ENST00000479283.1 2 318 MSTRG.107 DHTKD1 0.000000 0.000000 +650 chr10 + 12171636 12197404 ENST00000379051.1 7 708 MSTRG.109 SEC61A2 0.000000 0.000000 +651 chr10 + 12171636 12207411 MSTRG.109.1 12 2481 MSTRG.109 . 21.684380 34.457523 +652 chr10 + 12171640 12207411 ENST00000379033.3 11 2470 MSTRG.109 SEC61A2 0.000000 0.000000 +653 chr10 + 12171664 12207411 MSTRG.109.4 11 2358 MSTRG.109 . 18.860781 29.970690 +654 chr10 + 12171665 12200104 ENST00000441368.1 7 833 MSTRG.109 SEC61A2 0.000000 0.000000 +655 chr10 + 12171693 12211960 ENST00000475268.1 13 2183 MSTRG.109 SEC61A2 2.679028 4.257104 +656 chr10 + 12171698 12207411 ENST00000298428.9 12 2478 MSTRG.109 SEC61A2 18.834297 29.928604 +657 chr10 + 12171698 12211960 ENST00000495368.1 14 2311 MSTRG.109 SEC61A2 2.907670 4.620428 +658 chr10 + 12171700 12211960 ENST00000304267.8 12 2035 MSTRG.109 SEC61A2 0.000000 0.000000 +659 chr10 + 12171701 12200104 ENST00000472221.1 8 907 MSTRG.109 SEC61A2 1.624525 2.581448 +660 chr10 + 12171726 12207411 ENST00000379020.4 11 2252 MSTRG.109 SEC61A2 0.000000 0.000000 +661 chr10 + 12171732 12197309 ENST00000379017.3 7 2090 MSTRG.109 SEC61A2 20.100960 31.941395 +662 chr10 - 12172759 12172815 ENST00000584402.1 1 57 MSTRG.110 MIR548AK 0.000000 0.000000 +663 chr10 + 12178108 12191766 ENST00000457034.1 3 314 MSTRG.109 SEC61A2 0.000000 0.000000 +664 chr10 + 12185139 12200104 ENST00000418772.1 4 496 MSTRG.109 SEC61A2 0.000000 0.000000 +665 chr10 + 12187662 12187765 ENST00000458754.1 1 104 MSTRG.111 snoU13 0.000000 0.000000 +666 chr10 + 12191855 12207411 ENST00000419021.1 5 1643 MSTRG.109 SEC61A2 0.000000 0.000000 +667 chr10 + 12199018 12200284 ENST00000466451.1 2 427 MSTRG.109 SEC61A2 2.660100 4.227027 +668 chr10 - 12207324 12238143 ENST00000491614.1 10 3453 MSTRG.112 NUDT5 190.984283 303.483246 +669 chr10 - 12209575 12238143 ENST00000378937.3 11 1241 MSTRG.112 NUDT5 18.743765 29.784746 +670 chr10 - 12209576 12238143 ENST00000537776.1 10 1201 MSTRG.112 NUDT5 7.269458 11.551518 +671 chr10 - 12209671 12238143 ENST00000378952.3 11 1201 MSTRG.112 NUDT5 18.539244 29.459751 +672 chr10 - 12209737 12221131 ENST00000476462.1 6 622 MSTRG.112 NUDT5 7.873569 12.511480 +673 chr10 - 12211721 12238143 ENST00000378940.3 10 1401 MSTRG.112 NUDT5 30.474625 48.425648 +674 chr10 - 12212231 12238143 ENST00000378927.3 8 1580 MSTRG.112 NUDT5 29.722816 47.230988 +675 chr10 - 12214489 12215812 ENST00000498825.1 2 473 MSTRG.112 NUDT5 7.063801 11.224720 +676 chr10 - 12219842 12238143 ENST00000444732.1 5 709 MSTRG.112 NUDT5 1.139697 1.811033 +677 chr10 + 12237964 12272995 ENST00000429258.2 8 664 MSTRG.113 CDC123 6.357702 10.102695 +678 chr10 + 12237965 12292588 ENST00000281141.4 13 1543 MSTRG.113 CDC123 624.188965 991.866333 +679 chr10 + 12238129 12291717 ENST00000455773.3 11 971 MSTRG.113 CDC123 110.492744 175.578293 +680 chr10 + 12238195 12240875 ENST00000467016.1 2 296 MSTRG.113 CDC123 0.000000 0.000000 +681 chr10 + 12238222 12292588 ENST00000378900.2 12 1163 MSTRG.113 CDC123 10.378538 16.491997 +682 chr10 + 12238231 12279265 ENST00000442050.1 8 606 MSTRG.113 CDC123 179.337814 284.976440 +683 chr10 + 12238231 12292588 MSTRG.113.6 11 1052 MSTRG.113 . 4.430060 7.039579 +684 chr10 + 12259413 12292588 ENST00000498747.1 9 950 MSTRG.113 CDC123 0.000000 0.000000 +685 chr10 + 12272947 12292588 ENST00000440613.1 6 685 MSTRG.113 CDC123 0.000000 0.000000 +686 chr10 - 12286750 12289107 ENST00000598961.1 2 1827 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +687 chr10 - 12287627 12289844 ENST00000421657.1 2 1914 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +688 chr10 + 12288053 12292588 ENST00000497963.1 2 1233 MSTRG.113 CDC123 12.260038 19.481792 +689 chr10 + 12303670 12303926 ENST00000582360.1 1 257 ENSG00000265824.1 RN7SL232P 0.000000 0.000000 +690 chr10 - 12370135 12370388 ENST00000583190.1 1 254 ENSG00000264036.1 RN7SL198P 0.000000 0.000000 +691 chr10 + 12391481 12877545 ENST00000378847.3 11 8154 MSTRG.115 CAMK1D 20.320959 32.290981 +692 chr10 + 12391481 12877545 MSTRG.115.1 12 8134 MSTRG.115 . 13.427520 21.336975 +693 chr10 + 12391651 12708948 ENST00000487696.1 2 473 MSTRG.115 CAMK1D 0.000000 0.000000 +694 chr10 + 12391732 12869446 ENST00000378845.1 10 2882 MSTRG.115 CAMK1D 9.231364 14.669083 +695 chr10 + 12391732 12877545 MSTRG.115.4 11 7907 MSTRG.115 . 1.731075 2.750762 +696 chr10 + 12391758 12823236 MSTRG.115.7 6 1421 MSTRG.115 . 1.745926 2.774361 +697 chr10 + 12391758 12877545 MSTRG.115.6 12 7853 MSTRG.115 . 45.167038 71.772598 +698 chr10 + 12457927 12457999 ENST00000516629.1 1 73 MSTRG.116 SNORD45 0.000000 0.000000 +699 chr10 + 12498482 12498630 ENST00000516309.1 1 149 MSTRG.117 RNU6ATAC39P 0.000000 0.000000 +700 chr10 + 12580266 12869446 MSTRG.115.8 10 2774 MSTRG.115 . 0.000000 0.000000 +701 chr10 + 12620752 12620822 ENST00000582492.1 1 71 MSTRG.118 MIR4480 0.000000 0.000000 +702 chr10 - 12767253 12767352 ENST00000408404.1 1 100 MSTRG.119 MIR548Q 0.000000 0.000000 +703 chr10 - 12938627 13043697 ENST00000378825.3 3 2729 MSTRG.120 CCDC3 31.774546 50.491283 +704 chr10 - 12938627 13141811 ENST00000378839.1 7 3339 MSTRG.120 CCDC3 0.000000 0.000000 +705 chr10 - 12966679 12966785 ENST00000391197.1 1 107 MSTRG.121 RNA5SP300 0.000000 0.000000 +706 chr10 - 13099902 13100676 ENST00000441148.1 1 775 MSTRG.122 RPL5P25 3.215484 5.109559 +707 chr10 - 13103634 13141811 MSTRG.120.3 4 895 MSTRG.120 . 1.309402 2.080703 +708 chr10 - 13140536 13141811 MSTRG.120.4 3 511 MSTRG.120 . 0.000000 0.000000 +709 chr10 + 13141449 13180375 ENST00000263036.5 15 3916 MSTRG.123 OPTN 1.364136 2.167678 +710 chr10 + 13141603 13180375 ENST00000378764.2 15 3744 MSTRG.123 OPTN 1.345236 2.137645 +711 chr10 + 13142069 13180375 MSTRG.123.3 15 3622 MSTRG.123 . 92.399864 146.827835 +712 chr10 + 13142070 13180375 MSTRG.123.4 14 3469 MSTRG.123 . 101.727821 161.650406 +713 chr10 + 13142070 13180375 MSTRG.123.5 16 3693 MSTRG.123 . 88.028458 139.881454 +714 chr10 + 13142159 13151662 ENST00000487935.1 3 511 MSTRG.123 OPTN 0.000000 0.000000 +715 chr10 + 13142163 13161040 ENST00000482140.1 5 727 MSTRG.123 OPTN 0.000000 0.000000 +716 chr10 + 13142169 13180375 ENST00000378757.2 14 3388 MSTRG.123 OPTN 101.879845 161.891968 +717 chr10 + 13142173 13158340 ENST00000430081.1 5 861 MSTRG.123 OPTN 23.467991 37.291767 +718 chr10 + 13142173 13180375 ENST00000378748.3 16 3605 MSTRG.123 OPTN 95.397919 151.591888 +719 chr10 + 13142173 13180375 ENST00000378752.3 16 3572 MSTRG.123 OPTN 85.979126 136.624969 +720 chr10 + 13142225 13180375 ENST00000378747.3 15 3484 MSTRG.123 OPTN 54.516827 86.629860 +721 chr10 - 13146574 13146793 ENST00000456003.1 1 220 MSTRG.124 SNRPGP5 3.145455 4.998279 +722 chr10 + 13154487 13158540 ENST00000486862.1 2 423 MSTRG.123 OPTN 4.574824 7.269616 +723 chr10 + 13158268 13165198 ENST00000424614.1 4 664 MSTRG.123 OPTN 27.851444 44.257286 +724 chr10 + 13173319 13180375 ENST00000469025.1 4 2099 MSTRG.123 OPTN 0.000000 0.000000 +725 chr10 - 13181196 13181533 ENST00000442321.1 1 338 ENSG00000234175.1 RP11-730A19.9 0.000000 0.000000 +726 chr10 - 13184185 13184977 ENST00000442900.1 1 793 ENSG00000228330.1 RP11-730A19.5 0.000000 0.000000 +727 chr10 - 13198684 13200136 ENST00000447253.1 1 1453 ENSG00000203414.2 BTBD7P1 0.000000 0.000000 +728 chr10 + 13200491 13201463 MSTRG.125.1 1 973 MSTRG.125 . 5.493472 8.729392 +729 chr10 - 13201477 13201777 ENST00000418616.1 1 301 MSTRG.126 RP11-730A19.7 0.000000 0.000000 +730 chr10 + 13203554 13253104 ENST00000378714.3 20 4547 MSTRG.127 MCM10 22.202826 35.281357 +731 chr10 + 13203579 13214480 ENST00000479669.1 3 475 MSTRG.127 MCM10 0.000000 0.000000 +732 chr10 + 13203579 13253104 ENST00000484800.2 20 4525 MSTRG.127 MCM10 10.055976 15.979430 +733 chr10 + 13206128 13253104 ENST00000378694.1 18 4587 MSTRG.127 MCM10 1.045083 1.660687 +734 chr10 + 13234491 13237580 ENST00000459751.1 2 618 MSTRG.127 MCM10 0.000000 0.000000 +735 chr10 + 13237086 13243872 ENST00000481292.1 4 900 MSTRG.127 MCM10 0.000000 0.000000 +736 chr10 + 13240763 13246526 ENST00000485659.1 3 467 MSTRG.127 MCM10 0.000000 0.000000 +737 chr10 + 13259269 13259375 ENST00000606623.1 1 107 MSTRG.128 RNU6-6P 117.196259 186.230499 +738 chr10 - 13263767 13276331 ENST00000378681.3 5 826 ENSG00000165623.5 UCMA 0.000000 0.000000 +739 chr10 - 13263767 13276334 ENST00000463405.2 4 763 ENSG00000165623.5 UCMA 0.000000 0.000000 +740 chr10 - 13319796 13341763 ENST00000396913.2 8 1732 MSTRG.129 PHYH 0.000000 0.000000 +741 chr10 - 13319800 13342101 ENST00000263038.4 9 1577 MSTRG.129 PHYH 112.719124 179.116119 +742 chr10 - 13319843 13344412 ENST00000396920.3 9 1829 MSTRG.129 PHYH 2.999464 4.766293 +743 chr10 - 13325690 13341763 ENST00000453759.2 7 1097 MSTRG.129 PHYH 0.000000 0.000000 +744 chr10 - 13330412 13342101 ENST00000479604.1 6 691 MSTRG.129 PHYH 0.000000 0.000000 +745 chr10 - 13333461 13336987 ENST00000464049.1 2 1012 MSTRG.129 PHYH 1.449223 2.302885 +746 chr10 - 13337228 13342101 ENST00000463730.1 3 572 MSTRG.129 PHYH 2.646471 4.205370 +747 chr10 - 13350145 13350447 ENST00000429930.1 1 303 ENSG00000226209.1 AL138764.1 0.000000 0.000000 +748 chr10 - 13359424 13389358 MSTRG.130.1 9 3057 MSTRG.130 . 255.202179 405.528564 +749 chr10 - 13359424 13390297 ENST00000327347.5 9 3273 MSTRG.130 SEPHS1 98.375259 156.323029 +750 chr10 - 13360080 13390297 ENST00000378614.4 8 2404 MSTRG.130 SEPHS1 42.034279 66.794495 +751 chr10 - 13360083 13390297 ENST00000545675.1 10 2706 MSTRG.130 SEPHS1 3.277784 5.208557 +752 chr10 - 13360590 13390297 ENST00000537130.1 8 1836 MSTRG.130 SEPHS1 7.662659 12.176334 +753 chr10 - 13375877 13389358 ENST00000413411.1 5 660 MSTRG.130 SEPHS1 0.000000 0.000000 +754 chr10 - 13375901 13382790 ENST00000425947.1 4 383 MSTRG.130 SEPHS1 3.582602 5.692927 +755 chr10 - 13380716 13387460 ENST00000494329.1 2 796 MSTRG.130 SEPHS1 16.570055 26.330614 +756 chr10 + 13390362 13390978 MSTRG.131.1 1 617 MSTRG.131 . 1.970827 3.131739 +757 chr10 + 13457202 13465133 ENST00000448272.1 2 454 ENSG00000233256.1 RP11-445K13.2 0.000000 0.000000 +758 chr10 - 13480484 13502083 ENST00000486542.1 4 1764 MSTRG.132 BEND7 0.000000 0.000000 +759 chr10 - 13480501 13570974 ENST00000396900.2 9 2672 MSTRG.132 BEND7 0.000000 0.000000 +760 chr10 - 13480637 13544976 ENST00000341083.3 9 2239 MSTRG.132 BEND7 0.000000 0.000000 +761 chr10 - 13483084 13570974 MSTRG.132.4 9 4034 MSTRG.132 . 8.577904 13.630702 +762 chr10 - 13483084 13570974 MSTRG.132.5 9 7172 MSTRG.132 . 2.092040 3.324353 +763 chr10 - 13483084 13570974 MSTRG.132.6 8 7895 MSTRG.132 . 6.075597 9.654416 +764 chr10 - 13483084 13570974 MSTRG.132.7 9 4335 MSTRG.132 . 1.973730 3.136352 +765 chr10 - 13483087 13570974 MSTRG.132.10 6 7401 MSTRG.132 . 1.921975 3.054111 +766 chr10 - 13483087 13570974 MSTRG.132.11 9 7133 MSTRG.132 . 1.529100 2.429813 +767 chr10 - 13483087 13570974 MSTRG.132.12 10 4091 MSTRG.132 . 2.390522 3.798655 +768 chr10 - 13483087 13570974 MSTRG.132.13 10 4049 MSTRG.132 . 1.465116 2.328140 +769 chr10 - 13483087 13570974 MSTRG.132.8 9 4034 MSTRG.132 . 3.317868 5.272252 +770 chr10 - 13483087 13570974 MSTRG.132.9 8 7853 MSTRG.132 . 4.406462 7.002080 +771 chr10 - 13483088 13523120 ENST00000440282.1 3 6571 MSTRG.132 BEND7 21.672350 34.438408 +772 chr10 - 13483088 13570974 MSTRG.132.14 9 4334 MSTRG.132 . 2.815480 4.473933 +773 chr10 - 13483090 13570974 ENST00000396898.2 9 2375 MSTRG.132 BEND7 1.103821 1.754025 +774 chr10 - 13483113 13570974 MSTRG.132.17 9 2156 MSTRG.132 . 0.000000 0.000000 +775 chr10 - 13483113 13570974 MSTRG.132.18 9 7146 MSTRG.132 . 2.765521 4.394547 +776 chr10 - 13483113 13570974 MSTRG.132.19 7 5631 MSTRG.132 . 0.000000 0.000000 +777 chr10 - 13483114 13570974 MSTRG.132.20 9 2116 MSTRG.132 . 0.000000 0.000000 +778 chr10 - 13483355 13544976 ENST00000378605.3 8 1640 MSTRG.132 BEND7 0.000000 0.000000 +779 chr10 - 13483355 13570974 MSTRG.132.21 10 3820 MSTRG.132 . 1.804886 2.868051 +780 chr10 - 13483399 13570974 MSTRG.132.23 9 6818 MSTRG.132 . 1.232684 1.958794 +781 chr10 - 13484980 13494658 ENST00000480703.1 3 598 MSTRG.132 BEND7 6.118214 9.722137 +782 chr10 - 13484980 13570974 MSTRG.132.24 10 4355 MSTRG.132 . 0.000000 0.000000 +783 chr10 - 13484980 13570974 MSTRG.132.25 9 2400 MSTRG.132 . 0.000000 0.000000 +784 chr10 - 13487290 13494658 ENST00000463303.1 3 442 MSTRG.132 BEND7 0.000000 0.000000 +785 chr10 - 13487316 13523120 ENST00000469555.1 5 695 MSTRG.132 BEND7 0.000000 0.000000 +786 chr10 - 13534692 13538929 ENST00000492675.1 2 349 MSTRG.132 BEND7 0.000000 0.000000 +787 chr10 - 13534692 13570974 MSTRG.132.29 5 1226 MSTRG.132 . 2.339186 3.717079 +788 chr10 - 13538788 13570974 ENST00000466271.1 4 990 MSTRG.132 BEND7 0.000000 0.000000 +789 chr10 - 13553206 13553313 ENST00000365638.1 1 108 MSTRG.133 Y_RNA 0.000000 0.000000 +790 chr10 + 13570516 13572262 ENST00000438431.1 2 380 MSTRG.134 RP11-214D15.2 0.000000 0.000000 +791 chr10 + 13628927 13673142 ENST00000378572.3 10 1991 MSTRG.135 PRPF18 32.061138 50.946693 +792 chr10 + 13628927 13697929 MSTRG.135.1 15 12325 MSTRG.135 . 39.673809 63.043598 +793 chr10 + 13628939 13656086 ENST00000417658.1 10 1088 MSTRG.135 PRPF18 0.000000 0.000000 +794 chr10 + 13628968 13653683 ENST00000320054.4 7 819 MSTRG.135 PRPF18 7.749913 12.314985 +795 chr10 + 13628968 13697929 MSTRG.135.4 15 10144 MSTRG.135 . 0.000000 0.000000 +796 chr10 - 13633460 13634323 ENST00000445338.1 1 864 MSTRG.136 RP11-295P9.2 1.622343 2.577981 +797 chr10 + 13652047 13697929 ENST00000601460.1 7 1204 MSTRG.135 RP11-295P9.3 1.399022 2.223113 +798 chr10 + 13658531 13687074 ENST00000595538.1 5 734 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +799 chr10 + 13672284 13687074 ENST00000596044.1 5 824 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +800 chr10 + 13673143 13687074 ENST00000601075.1 4 923 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +801 chr10 + 13673288 13697929 ENST00000597920.1 4 1893 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +802 chr10 + 13673333 13690230 ENST00000440878.1 3 397 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +803 chr10 + 13673722 13696427 ENST00000601758.1 5 744 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +804 chr10 + 13673768 13697929 ENST00000599639.1 4 1099 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +805 chr10 + 13674680 13697929 ENST00000596499.1 6 1159 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +806 chr10 + 13678997 13687074 ENST00000599378.1 4 603 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +807 chr10 + 13680646 13686563 ENST00000610032.1 1 5918 MSTRG.135 RP11-295P9.3 5.899525 9.374630 +808 chr10 + 13680825 13688669 ENST00000437446.1 2 1852 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +809 chr10 + 13685644 13695446 ENST00000600249.1 6 773 MSTRG.135 RP11-295P9.3 1.073967 1.706585 +810 chr10 - 13685706 13900912 ENST00000358621.4 23 6407 MSTRG.137 FRMD4A 10.594850 16.835726 +811 chr10 - 13685706 13933775 MSTRG.137.2 24 6559 MSTRG.137 . 241.448471 383.673248 +812 chr10 - 13685706 14050897 MSTRG.137.1 23 7174 MSTRG.137 . 89.887604 142.835739 +813 chr10 - 13685712 14372883 ENST00000357447.2 25 6815 MSTRG.137 FRMD4A 0.000000 0.000000 +814 chr10 + 13686576 13690773 ENST00000600501.1 3 793 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +815 chr10 + 13686791 13697929 ENST00000596235.1 6 1237 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +816 chr10 - 13688056 14050897 MSTRG.137.5 24 4860 MSTRG.137 . 19.117176 30.378115 +817 chr10 - 13688272 13696526 ENST00000475325.1 2 875 MSTRG.137 FRMD4A 3.221116 5.118509 +818 chr10 - 13688334 13699173 ENST00000495956.1 3 1337 MSTRG.137 FRMD4A 1.642963 2.610748 +819 chr10 + 13688670 13697929 ENST00000419851.2 4 1380 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +820 chr10 + 13688844 13697929 ENST00000594575.1 5 1355 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +821 chr10 + 13690184 13710595 ENST00000593351.1 3 1120 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +822 chr10 + 13691264 13697929 ENST00000600511.1 4 949 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +823 chr10 + 13691284 13697929 ENST00000593358.1 4 760 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +824 chr10 - 13693905 14372182 ENST00000378503.1 23 3201 MSTRG.137 FRMD4A 0.000000 0.000000 +825 chr10 + 13694052 13697929 ENST00000598625.1 3 1065 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +826 chr10 + 13695825 13697929 ENST00000430721.1 2 1155 MSTRG.135 RP11-295P9.3 1.103017 1.752747 +827 chr10 - 13699174 13750043 MSTRG.137.11 12 2390 MSTRG.137 . 28.740498 45.670036 +828 chr10 - 13699174 13750043 MSTRG.137.13 12 2460 MSTRG.137 . 18.682514 29.687414 +829 chr10 - 13699174 13750043 MSTRG.137.14 10 2565 MSTRG.137 . 19.901947 31.625154 +830 chr10 - 13699174 13750043 MSTRG.137.15 9 2478 MSTRG.137 . 16.114895 25.607344 +831 chr10 - 13699174 13750043 MSTRG.137.17 11 3109 MSTRG.137 . 56.240311 89.368568 +832 chr10 - 13699174 13750043 MSTRG.137.9 11 2424 MSTRG.137 . 20.118090 31.968615 +833 chr10 - 13699174 13933775 MSTRG.137.10 22 2558 MSTRG.137 . 7.842427 12.461994 +834 chr10 - 13699174 14014369 MSTRG.137.16 21 3033 MSTRG.137 . 6.492716 10.317239 +835 chr10 - 13699174 14050897 MSTRG.137.12 23 3789 MSTRG.137 . 3.532186 5.612814 +836 chr10 - 13708224 14014369 ENST00000264546.6 17 2145 MSTRG.137 FRMD4A 2.766706 4.396429 +837 chr10 + 13717646 13717990 ENST00000609756.1 1 345 MSTRG.138 RP11-295P9.12 1.194203 1.897646 +838 chr10 + 13724521 13726874 ENST00000600850.1 2 1978 MSTRG.139 RP11-295P9.8 0.000000 0.000000 +839 chr10 - 13734169 13750043 ENST00000492155.1 3 3017 MSTRG.137 FRMD4A 12.591168 20.007973 +840 chr10 - 13735703 14050897 ENST00000342409.2 14 2106 MSTRG.137 FRMD4A 0.000000 0.000000 +841 chr10 - 13735983 13750043 ENST00000477221.1 4 971 MSTRG.137 FRMD4A 0.000000 0.000000 +842 chr10 + 13746978 13747072 ENST00000410303.1 1 95 MSTRG.140 AL157392.1 0.000000 0.000000 +843 chr10 + 13752415 13754054 ENST00000412388.1 2 373 MSTRG.141 RP11-295P9.6 0.000000 0.000000 +844 chr10 + 13769796 13769916 ENST00000362537.1 1 121 MSTRG.142 RNA5SP301 0.000000 0.000000 +845 chr10 + 13771383 13798200 ENST00000449462.1 3 474 MSTRG.143 RP11-353M9.1 0.000000 0.000000 +846 chr10 + 13912797 13913175 ENST00000475013.1 1 379 MSTRG.144 RP11-308K19.2 0.000000 0.000000 +847 chr10 + 14033815 14049525 ENST00000446193.1 3 570 MSTRG.145 RP11-142M10.2 0.000000 0.000000 +848 chr10 + 14053432 14063601 MSTRG.146.1 2 1693 MSTRG.146 . 1.939161 3.081420 +849 chr10 + 14116283 14129734 ENST00000451617.1 3 920 MSTRG.147 RP11-397C18.2 0.000000 0.000000 +850 chr10 + 14116283 14131638 MSTRG.147.1 5 1432 MSTRG.147 . 1.564724 2.486422 +851 chr10 + 14116702 14120540 MSTRG.147.4 2 235 MSTRG.147 . 0.000000 0.000000 +852 chr10 + 14116702 14128905 MSTRG.147.3 3 441 MSTRG.147 . 0.000000 0.000000 +853 chr10 - 14124946 14504141 ENST00000493380.1 4 1197 MSTRG.137 FRMD4A 0.000000 0.000000 +854 chr10 - 14368174 14504141 ENST00000475141.2 4 1233 MSTRG.137 FRMD4A 0.000000 0.000000 +855 chr10 + 14417237 14432137 MSTRG.148.1 3 3915 MSTRG.148 . 46.412018 73.750931 +856 chr10 + 14417459 14432137 MSTRG.148.2 4 3009 MSTRG.148 . 59.458916 94.483086 +857 chr10 + 14418734 14432137 MSTRG.148.3 3 1684 MSTRG.148 . 90.815506 144.310211 +858 chr10 + 14418887 14432137 MSTRG.148.4 4 2315 MSTRG.148 . 67.796425 107.731789 +859 chr10 + 14418887 14456385 MSTRG.148.5 3 2567 MSTRG.148 . 20.907917 33.223686 +860 chr10 - 14425199 14425276 ENST00000584305.1 1 78 MSTRG.149 MIR4293 0.000000 0.000000 +861 chr10 + 14460801 14481374 MSTRG.150.1 3 861 MSTRG.150 . 1.125436 1.788372 +862 chr10 + 14478575 14478660 ENST00000408444.1 1 86 MSTRG.151 MIR1265 0.000000 0.000000 +863 chr10 - 14560556 14590669 ENST00000378470.1 4 3316 MSTRG.152 FAM107B 226.487152 359.898987 +864 chr10 - 14560556 14598413 MSTRG.152.2 5 3204 MSTRG.152 . 293.620819 466.577606 +865 chr10 - 14560556 14646417 MSTRG.152.1 6 3404 MSTRG.152 . 15.879981 25.234055 +866 chr10 - 14560556 14646417 MSTRG.152.3 6 3387 MSTRG.152 . 13.429928 21.340803 +867 chr10 - 14560556 14646417 MSTRG.152.4 5 3338 MSTRG.152 . 13.138416 20.877577 +868 chr10 - 14560556 14646417 MSTRG.152.5 6 5580 MSTRG.152 . 34.109810 54.202133 +869 chr10 - 14560559 14816896 ENST00000181796.2 5 3785 MSTRG.152 FAM107B 0.000000 0.000000 +870 chr10 - 14561158 14646417 ENST00000468747.1 4 2662 MSTRG.152 FAM107B 8.457435 13.439271 +871 chr10 - 14561512 14646417 ENST00000378467.4 5 2374 MSTRG.152 FAM107B 0.000000 0.000000 +872 chr10 - 14561901 14816896 ENST00000487335.1 6 2509 MSTRG.152 FAM107B 0.000000 0.000000 +873 chr10 - 14562794 14614188 ENST00000378465.3 4 1113 MSTRG.152 FAM107B 0.000000 0.000000 +874 chr10 - 14562850 14614188 ENST00000378458.2 5 1284 MSTRG.152 FAM107B 0.000000 0.000000 +875 chr10 - 14563016 14598360 ENST00000478076.1 4 971 MSTRG.152 FAM107B 0.000000 0.000000 +876 chr10 - 14563072 14614188 ENST00000378462.1 4 768 MSTRG.152 FAM107B 0.000000 0.000000 +877 chr10 - 14563088 14590669 ENST00000481209.1 5 887 MSTRG.152 FAM107B 0.000000 0.000000 +878 chr10 - 14563095 14564224 ENST00000475858.1 2 568 MSTRG.152 FAM107B 0.000000 0.000000 +879 chr10 - 14563136 14596228 ENST00000496330.1 5 697 MSTRG.152 FAM107B 0.000000 0.000000 +880 chr10 - 14563136 14598413 ENST00000492700.1 4 558 MSTRG.152 FAM107B 0.000000 0.000000 +881 chr10 - 14563157 14614338 ENST00000479731.1 4 595 MSTRG.152 FAM107B 0.000000 0.000000 +882 chr10 - 14563193 14614338 ENST00000468492.1 5 625 MSTRG.152 FAM107B 0.000000 0.000000 +883 chr10 - 14563200 14614188 ENST00000452706.2 4 868 MSTRG.152 FAM107B 0.000000 0.000000 +884 chr10 - 14563206 14574709 ENST00000489100.1 4 559 MSTRG.152 FAM107B 0.000000 0.000000 +885 chr10 - 14563211 14598014 ENST00000494865.1 5 691 MSTRG.152 FAM107B 0.000000 0.000000 +886 chr10 - 14563280 14598360 ENST00000475786.1 5 773 MSTRG.152 FAM107B 0.000000 0.000000 +887 chr10 - 14563868 14614188 ENST00000488576.1 5 711 MSTRG.152 FAM107B 0.000000 0.000000 +888 chr10 - 14563869 14595482 ENST00000474143.1 3 496 MSTRG.152 FAM107B 0.000000 0.000000 +889 chr10 - 14563875 14654551 ENST00000442012.1 4 458 MSTRG.152 FAM107B 0.000000 0.000000 +890 chr10 - 14563893 14614188 ENST00000482277.1 4 642 MSTRG.152 FAM107B 0.000000 0.000000 +891 chr10 - 14563944 14614188 ENST00000472095.1 5 632 MSTRG.152 FAM107B 0.000000 0.000000 +892 chr10 - 14571527 14646417 ENST00000471815.1 3 1022 MSTRG.152 FAM107B 0.000000 0.000000 +893 chr10 - 14571954 14614188 ENST00000464952.1 4 748 MSTRG.152 FAM107B 0.000000 0.000000 +894 chr10 - 14576785 14614188 ENST00000495292.1 3 576 MSTRG.152 FAM107B 0.000000 0.000000 +895 chr10 - 14644456 14646417 ENST00000491458.1 2 573 MSTRG.152 FAM107B 2.046128 3.251396 +896 chr10 + 14694741 14703690 ENST00000443282.1 3 357 MSTRG.153 RP11-7C6.1 0.000000 0.000000 +897 chr10 - 14705394 14705493 ENST00000364896.1 1 100 MSTRG.154 RNA5SP302 0.000000 0.000000 +898 chr10 - 14765170 14766054 ENST00000456871.1 1 885 MSTRG.155 RP11-398C13.2 0.000000 0.000000 +899 chr10 - 14860113 14880071 MSTRG.156.1 5 2600 MSTRG.156 . 0.000000 0.000000 +900 chr10 - 14860273 14880071 MSTRG.156.2 6 2561 MSTRG.156 . 9.412458 14.956850 +901 chr10 - 14860304 14880071 MSTRG.156.3 6 2526 MSTRG.156 . 0.000000 0.000000 +902 chr10 - 14861249 14880574 ENST00000378442.1 6 1492 MSTRG.156 CDNF 0.000000 0.000000 +903 chr10 - 14861530 14880071 ENST00000378441.2 4 1041 MSTRG.156 CDNF 0.000000 0.000000 +904 chr10 - 14861884 14870271 ENST00000467405.1 3 529 MSTRG.156 CDNF 0.000000 0.000000 +905 chr10 - 14861887 14878293 ENST00000466269.1 4 585 MSTRG.156 CDNF 0.000000 0.000000 +906 chr10 - 14861979 14880071 ENST00000465530.1 4 690 MSTRG.156 CDNF 1.066417 1.694588 +907 chr10 + 14880163 14913740 ENST00000378372.3 14 1904 MSTRG.157 HSPA14 159.023819 252.696518 +908 chr10 + 14880228 14884845 ENST00000493863.1 4 1108 MSTRG.157 HSPA14 0.000000 0.000000 +909 chr10 + 14880228 14888988 MSTRG.157.2 5 4727 MSTRG.157 . 65.633698 104.295105 +910 chr10 + 14880301 14888988 ENST00000437161.2 4 3941 MSTRG.157 HSPA14 9.068725 14.410640 +911 chr10 + 14880330 14884845 ENST00000493178.1 5 1105 MSTRG.157 HSPA14 1.884595 2.994712 +912 chr10 + 14880436 14891719 ENST00000441647.1 6 630 MSTRG.157 HSPA14 7.690227 12.220141 +913 chr10 + 14892714 14896279 ENST00000470430.1 3 927 MSTRG.157 HSPA14 11.650598 18.513361 +914 chr10 - 14919687 14920685 ENST00000609399.1 1 999 MSTRG.158 RP11-398C13.6 7.663664 12.177931 +915 chr10 + 14920819 14954823 ENST00000378331.5 5 11468 MSTRG.159 SUV39H2 2.161720 3.435077 +916 chr10 + 14920819 14955409 MSTRG.159.1 6 11880 MSTRG.159 . 3.354701 5.330781 +917 chr10 + 14920847 14954823 ENST00000433779.1 6 11087 MSTRG.159 SUV39H2 1.309712 2.081195 +918 chr10 + 14920862 14954823 ENST00000378325.3 6 11031 MSTRG.159 SUV39H2 2.169802 3.447920 +919 chr10 + 14920888 14954823 ENST00000354919.6 6 11545 MSTRG.159 SUV39H2 2.465459 3.917733 +920 chr10 + 14920888 14954823 MSTRG.159.6 6 11586 MSTRG.159 . 1.881723 2.990149 +921 chr10 + 14920888 14955409 MSTRG.159.5 7 11957 MSTRG.159 . 2.977428 4.731277 +922 chr10 + 14920899 14954823 ENST00000313519.5 5 11596 MSTRG.159 SUV39H2 1.387253 2.204412 +923 chr10 + 14920921 14939516 ENST00000420416.1 2 711 MSTRG.159 SUV39H2 0.000000 0.000000 +924 chr10 + 14921123 14954823 MSTRG.159.10 6 11891 MSTRG.159 . 0.000000 0.000000 +925 chr10 + 14921815 14939516 ENST00000412254.1 3 1070 MSTRG.159 SUV39H2 0.000000 0.000000 +926 chr10 + 14923499 14954823 ENST00000358298.6 4 10842 MSTRG.159 SUV39H2 1.078900 1.714424 +927 chr10 - 14939358 14996431 ENST00000378289.4 14 3532 MSTRG.160 DCLRE1C 6.873483 10.922296 +928 chr10 - 14948897 14996431 ENST00000453695.2 14 4011 MSTRG.160 DCLRE1C 18.098337 28.759130 +929 chr10 - 14949878 14996431 ENST00000378246.2 13 2974 MSTRG.160 DCLRE1C 0.000000 0.000000 +930 chr10 - 14950165 14996431 ENST00000357717.2 12 2602 MSTRG.160 DCLRE1C 0.000000 0.000000 +931 chr10 - 14950170 14996431 ENST00000378249.1 12 2630 MSTRG.160 DCLRE1C 0.000000 0.000000 +932 chr10 - 14950170 14996431 ENST00000378254.1 15 2869 MSTRG.160 DCLRE1C 0.000000 0.000000 +933 chr10 - 14950170 14996431 ENST00000378255.1 16 3191 MSTRG.160 DCLRE1C 0.000000 0.000000 +934 chr10 - 14950170 14996431 ENST00000378258.1 15 2823 MSTRG.160 DCLRE1C 2.340702 3.719488 +935 chr10 - 14950170 14996431 ENST00000378278.2 14 2738 MSTRG.160 DCLRE1C 0.000000 0.000000 +936 chr10 - 14950170 14996431 ENST00000396817.2 16 3145 MSTRG.160 DCLRE1C 0.000000 0.000000 +937 chr10 - 14950187 14965674 ENST00000378242.1 3 1933 MSTRG.160 DCLRE1C 0.000000 0.000000 +938 chr10 - 14950187 14996431 MSTRG.160.11 16 2937 MSTRG.160 . 1.247367 1.982126 +939 chr10 - 14950741 14970141 ENST00000492201.1 6 1020 MSTRG.160 DCLRE1C 0.000000 0.000000 +940 chr10 - 14950741 14996431 MSTRG.160.13 15 2307 MSTRG.160 . 0.000000 0.000000 +941 chr10 - 14951169 14953321 ENST00000489845.1 2 294 MSTRG.160 DCLRE1C 0.000000 0.000000 +942 chr10 - 14951169 15059043 MSTRG.160.15 7 780 MSTRG.160 . 0.000000 0.000000 +943 chr10 - 14961795 14970141 ENST00000489161.1 3 253 MSTRG.160 DCLRE1C 0.000000 0.000000 +944 chr10 - 14961795 14996431 MSTRG.160.17 13 1549 MSTRG.160 . 0.000000 0.000000 +945 chr10 - 14970142 14996431 ENST00000418843.1 11 1302 MSTRG.160 DCLRE1C 0.000000 0.000000 +946 chr10 - 14976444 14996431 ENST00000378241.1 10 1247 MSTRG.160 DCLRE1C 0.000000 0.000000 +947 chr10 - 14976722 14996431 ENST00000456122.1 8 1290 MSTRG.160 DCLRE1C 0.000000 0.000000 +948 chr10 + 15001398 15030049 MSTRG.161.1 6 1215 MSTRG.161 . 0.000000 0.000000 +949 chr10 + 15001438 15014850 ENST00000407572.1 3 625 MSTRG.161 MEIG1 0.000000 0.000000 +950 chr10 + 15001438 15014850 ENST00000477770.1 2 458 MSTRG.161 MEIG1 0.000000 0.000000 +951 chr10 + 15001509 15014850 ENST00000496225.2 3 686 MSTRG.161 MEIG1 0.000000 0.000000 +952 chr10 + 15008438 15014850 ENST00000378240.1 2 507 MSTRG.161 MEIG1 0.000000 0.000000 +953 chr10 + 15014554 15030049 ENST00000467536.1 3 548 MSTRG.161 MEIG1 0.000000 0.000000 +954 chr10 - 15028941 15029514 ENST00000431186.2 1 574 MSTRG.162 OR7E110P 0.000000 0.000000 +955 chr10 - 15041049 15042054 ENST00000502808.2 1 1006 MSTRG.163 OR7E26P 0.000000 0.000000 +956 chr10 - 15049860 15050883 ENST00000382617.4 1 1024 MSTRG.164 OR7E115P 0.000000 0.000000 +957 chr10 - 15057071 15130775 ENST00000378211.3 8 997 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +958 chr10 - 15057369 15063862 ENST00000454630.1 5 470 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +959 chr10 + 15074226 15107752 ENST00000428897.1 6 859 MSTRG.165 OLAH 0.000000 0.000000 +960 chr10 + 15074252 15098981 ENST00000413672.1 4 583 MSTRG.165 OLAH 0.000000 0.000000 +961 chr10 + 15080621 15107752 ENST00000429028.1 6 797 MSTRG.165 OLAH 0.000000 0.000000 +962 chr10 + 15085895 15115851 ENST00000378228.3 8 1675 MSTRG.165 OLAH 0.000000 0.000000 +963 chr10 + 15085926 15104083 ENST00000378225.1 4 810 MSTRG.165 OLAH 0.000000 0.000000 +964 chr10 + 15085962 15115851 ENST00000378217.3 9 1767 MSTRG.165 OLAH 0.000000 0.000000 +965 chr10 + 15091722 15110069 ENST00000493912.1 5 491 MSTRG.165 OLAH 0.000000 0.000000 +966 chr10 + 15107537 15115851 ENST00000485251.1 2 982 MSTRG.165 OLAH 0.000000 0.000000 +967 chr10 - 15119522 15130775 ENST00000356189.5 4 1322 MSTRG.160 ACBD7 11.725418 18.632256 +968 chr10 - 15120486 15130715 ENST00000496890.1 4 709 MSTRG.160 ACBD7 0.000000 0.000000 +969 chr10 - 15135262 15135610 ENST00000452090.1 1 349 ENSG00000228312.1 GAPDHP45 0.000000 0.000000 +970 chr10 - 15137384 15139318 ENST00000378207.3 2 1714 MSTRG.166 C10orf111 0.000000 0.000000 +971 chr10 + 15139179 15146256 ENST00000378203.1 3 1302 MSTRG.167 RPP38 32.201931 51.170418 +972 chr10 + 15139214 15148129 ENST00000378201.2 5 833 MSTRG.167 RPP38 0.000000 0.000000 +973 chr10 + 15139236 15181817 ENST00000451677.1 3 323 MSTRG.167 RPP38 0.000000 0.000000 +974 chr10 + 15139330 15146256 ENST00000378202.5 2 1032 MSTRG.167 RPP38 49.379433 78.466301 +975 chr10 + 15139381 15146256 ENST00000378197.4 3 1457 MSTRG.167 RPP38 62.037983 98.581345 +976 chr10 + 15139419 15146256 ENST00000441850.1 2 1300 MSTRG.167 RPP38 17.993643 28.592764 +977 chr10 - 15144583 15151838 ENST00000466201.1 2 1238 MSTRG.168 NMT2 3.890993 6.182976 +978 chr10 - 15147758 15210692 MSTRG.168.2 12 2497 MSTRG.168 . 12.324848 19.584778 +979 chr10 - 15147758 15210692 MSTRG.168.3 13 2540 MSTRG.168 . 17.858234 28.377594 +980 chr10 - 15148372 15161512 ENST00000486786.1 4 803 MSTRG.168 NMT2 0.000000 0.000000 +981 chr10 - 15149865 15210692 ENST00000378165.4 12 2907 MSTRG.168 NMT2 83.842773 133.230209 +982 chr10 - 15150293 15210692 ENST00000378150.1 13 2522 MSTRG.168 NMT2 23.164612 36.809685 +983 chr10 - 15151020 15202124 ENST00000540259.1 12 1832 MSTRG.168 NMT2 0.000000 0.000000 +984 chr10 - 15151098 15210501 ENST00000535341.1 13 1669 MSTRG.168 NMT2 0.000000 0.000000 +985 chr10 - 15174816 15183352 ENST00000478580.1 5 840 MSTRG.168 NMT2 0.000000 0.000000 +986 chr10 - 15196801 15197319 ENST00000415473.1 1 519 MSTRG.169 PPIAP30 0.000000 0.000000 +987 chr10 - 15213035 15213277 ENST00000450788.1 1 243 ENSG00000228181.1 RP11-455B2.9 0.000000 0.000000 +988 chr10 - 15253642 15413061 ENST00000378116.4 8 3955 MSTRG.170 FAM171A1 162.117889 257.613129 +989 chr10 - 15256170 15290814 ENST00000477161.1 3 725 MSTRG.170 FAM171A1 1.038806 1.650713 +990 chr10 + 15279491 15283766 ENST00000433455.1 2 794 MSTRG.171 RP11-25G10.2 0.000000 0.000000 +991 chr10 - 15290638 15413061 ENST00000455654.1 4 605 MSTRG.170 FAM171A1 0.000000 0.000000 +992 chr10 - 15555948 15762124 ENST00000378076.3 30 6755 MSTRG.172 ITGA8 18.435249 29.294500 +993 chr10 - 15638512 15646286 ENST00000477064.1 2 867 MSTRG.172 ITGA8 0.000000 0.000000 +994 chr10 - 15653509 15686220 ENST00000468882.1 4 425 MSTRG.172 ITGA8 0.000000 0.000000 +995 chr10 - 15820169 15860007 ENST00000378036.1 6 2452 MSTRG.173 FAM188A 0.000000 0.000000 +996 chr10 - 15820169 15902519 ENST00000277632.3 15 2381 MSTRG.173 FAM188A 109.367905 173.790863 +997 chr10 - 15820169 15902519 ENST00000477891.1 14 2329 MSTRG.173 FAM188A 17.184589 27.307140 +998 chr10 - 15820853 15824334 ENST00000476912.1 2 469 MSTRG.173 FAM188A 2.795487 4.442163 +999 chr10 - 15820853 15902519 MSTRG.173.4 13 1528 MSTRG.173 . 22.689985 36.055477 +1000 chr10 - 15830827 15879317 ENST00000418767.1 7 986 MSTRG.173 FAM188A 6.551166 10.410118 diff -r 298d81e5e138 -r d3377a16d881 test-data/ASP14_doxycycline_3.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ASP14_doxycycline_3.tabular Wed Jan 14 09:30:42 2026 +0000 @@ -0,0 +1,1001 @@ +t_id chr strand start end t_name num_exons length gene_id gene_name cov FPKM +1 chr10 + 90652 92824 ENST00000416477.1 6 747 ENSG00000237297.1 RP11-631M21.6 0.000000 0.000000 +2 chr10 - 92828 96173 ENST00000447903.2 4 2273 MSTRG.1 TUBB8 0.000000 0.000000 +3 chr10 - 92832 95347 ENST00000309812.4 4 1669 MSTRG.1 TUBB8 0.000000 0.000000 +4 chr10 - 92860 96173 MSTRG.1.3 4 2409 MSTRG.1 . 0.000000 0.000000 +5 chr10 - 93434 95347 ENST00000332708.5 3 958 MSTRG.1 TUBB8 0.000000 0.000000 +6 chr10 - 93518 120103 ENST00000413237.3 5 1968 MSTRG.1 TUBB8 0.000000 0.000000 +7 chr10 - 93645 95347 ENST00000482075.1 3 934 MSTRG.1 TUBB8 0.000000 0.000000 +8 chr10 - 126334 132205 ENST00000423948.1 7 1312 ENSG00000232420.2 IL9RP2 0.000000 0.000000 +9 chr10 + 180359 300577 MSTRG.2.1 15 4363 MSTRG.2 . 5.737348 8.244675 +10 chr10 + 180405 283617 ENST00000439456.1 5 788 MSTRG.2 ZMYND11 0.000000 0.000000 +11 chr10 + 180424 295201 ENST00000381602.4 14 2287 MSTRG.2 ZMYND11 2.716394 3.903508 +12 chr10 + 180424 300577 ENST00000309776.4 15 4404 MSTRG.2 ZMYND11 10.758407 15.460028 +13 chr10 + 180643 295201 ENST00000509513.2 14 2065 MSTRG.2 ZMYND11 7.792309 11.197691 +14 chr10 + 180643 300577 MSTRG.2.5 14 4433 MSTRG.2 . 33.614201 48.304226 +15 chr10 + 180742 300577 ENST00000397959.3 13 3831 MSTRG.2 ZMYND11 13.929996 20.017660 +16 chr10 + 180742 300577 MSTRG.2.7 14 3924 MSTRG.2 . 33.953037 48.791138 +17 chr10 + 181009 300577 ENST00000381591.1 15 4229 MSTRG.2 ZMYND11 51.921577 74.612259 +18 chr10 + 181424 300577 ENST00000381607.4 14 3909 MSTRG.2 ZMYND11 41.729958 59.966721 +19 chr10 + 181424 300577 ENST00000403354.1 13 3831 MSTRG.2 ZMYND11 36.123611 51.910294 +20 chr10 + 181449 300577 ENST00000402736.1 14 3953 MSTRG.2 ZMYND11 49.662716 71.366241 +21 chr10 + 181449 300577 MSTRG.2.12 15 4046 MSTRG.2 . 53.124630 76.341072 +22 chr10 - 200771 200883 ENST00000391029.1 1 113 MSTRG.3 RNA5SP297 0.000000 0.000000 +23 chr10 + 225930 300577 ENST00000602682.1 12 3744 MSTRG.2 ZMYND11 4.953230 7.117883 +24 chr10 + 225933 300577 ENST00000381604.4 15 4091 MSTRG.2 ZMYND11 8.789573 12.630778 +25 chr10 + 225934 283617 ENST00000397955.2 6 673 MSTRG.2 ZMYND11 0.000000 0.000000 +26 chr10 + 225934 300577 ENST00000381584.1 15 4090 MSTRG.2 ZMYND11 46.660061 67.051369 +27 chr10 + 225953 295201 ENST00000558098.2 13 1859 MSTRG.2 ZMYND11 8.597462 12.354712 +28 chr10 + 255833 300577 ENST00000545619.1 11 3616 MSTRG.2 ZMYND11 30.969887 44.504299 +29 chr10 + 255891 300577 ENST00000535374.1 10 3492 MSTRG.2 ZMYND11 21.494045 30.887339 +30 chr10 + 285902 292939 ENST00000488275.1 4 581 MSTRG.2 ZMYND11 4.302817 6.183227 +31 chr10 + 290411 294548 ENST00000473115.1 4 680 MSTRG.2 ZMYND11 0.000000 0.000000 +32 chr10 - 309144 309545 MSTRG.4.1 2 247 MSTRG.4 . 0.000000 0.000000 +33 chr10 - 320130 735683 ENST00000280886.6 37 7971 MSTRG.5 DIP2C 43.544739 62.574593 +34 chr10 - 320192 735683 MSTRG.5.2 38 8077 MSTRG.5 . 38.313259 55.056858 +35 chr10 - 320204 566221 MSTRG.5.5 39 7926 MSTRG.5 . 1.229838 1.767300 +36 chr10 - 320204 644381 MSTRG.5.3 39 7922 MSTRG.5 . 1.511846 2.172550 +37 chr10 - 320204 644381 MSTRG.5.4 37 7724 MSTRG.5 . 10.172338 14.617836 +38 chr10 + 323124 323248 ENST00000579524.1 1 125 MSTRG.6 AL603831.1 0.000000 0.000000 +39 chr10 - 327955 328065 ENST00000364991.1 1 111 MSTRG.7 RNA5SP298 6.288288 9.036386 +40 chr10 - 370579 375541 ENST00000434695.2 3 721 MSTRG.5 DIP2C 0.000000 0.000000 +41 chr10 - 401488 629900 ENST00000381496.3 26 4205 MSTRG.5 DIP2C 0.000000 0.000000 +42 chr10 - 402180 419130 ENST00000540204.1 8 1358 MSTRG.5 DIP2C 0.000000 0.000000 +43 chr10 - 410902 433749 ENST00000421992.1 7 731 MSTRG.5 DIP2C 0.000000 0.000000 +44 chr10 - 476181 476444 ENST00000470784.2 1 264 MSTRG.8 RN7SL754P 0.000000 0.000000 +45 chr10 + 483501 487110 ENST00000425723.2 2 558 MSTRG.9 RP11-490E15.2 0.000000 0.000000 +46 chr10 - 486811 735683 ENST00000423550.1 5 727 MSTRG.5 DIP2C 0.000000 0.000000 +47 chr10 + 674578 677195 ENST00000451601.1 2 1657 MSTRG.10 RP11-809C18.3 0.000000 0.000000 +48 chr10 - 687629 687718 ENST00000578903.1 1 90 MSTRG.11 MIR5699 0.000000 0.000000 +49 chr10 + 695888 698593 ENST00000441152.2 3 2249 MSTRG.12 PRR26 0.000000 0.000000 +50 chr10 + 696017 711109 ENST00000381489.5 3 2838 MSTRG.12 PRR26 0.000000 0.000000 +51 chr10 + 709498 712562 ENST00000443662.1 2 550 MSTRG.12 RP11-809C18.5 0.000000 0.000000 +52 chr10 + 714400 715521 ENST00000608587.1 1 1122 MSTRG.13 RP11-809C18.4 0.000000 0.000000 +53 chr10 + 789932 790898 ENST00000412695.1 2 424 ENSG00000231601.1 RP11-164C1.2 0.000000 0.000000 +54 chr10 - 855213 936689 MSTRG.14.2 18 6075 MSTRG.14 . 17.202330 24.720064 +55 chr10 - 855213 977680 MSTRG.14.1 18 8034 MSTRG.14 . 13.571826 19.502964 +56 chr10 - 855482 977680 MSTRG.14.3 18 5953 MSTRG.14 . 80.350540 115.465210 +57 chr10 - 855482 977680 MSTRG.14.4 19 7836 MSTRG.14 . 17.635056 25.341900 +58 chr10 - 855484 931702 ENST00000316157.3 17 5640 MSTRG.14 LARP4B 3.923340 5.637912 +59 chr10 - 857746 866870 ENST00000609318.1 4 4848 MSTRG.14 LARP4B 2.753875 3.957369 +60 chr10 - 858446 871256 ENST00000448368.1 6 1510 MSTRG.14 LARP4B 2.251963 3.236112 +61 chr10 - 860382 863829 ENST00000608970.1 3 699 MSTRG.14 LARP4B 0.000000 0.000000 +62 chr10 - 860702 861655 ENST00000469487.1 2 859 MSTRG.14 LARP4B 1.536846 2.208476 +63 chr10 - 909683 977680 ENST00000476529.1 6 853 MSTRG.14 LARP4B 0.000000 0.000000 +64 chr10 - 909719 977680 ENST00000406525.2 6 797 MSTRG.14 LARP4B 0.000000 0.000000 +65 chr10 - 910094 977680 ENST00000481118.1 5 685 MSTRG.14 LARP4B 0.000000 0.000000 +66 chr10 - 910181 949455 ENST00000412411.1 5 432 MSTRG.14 LARP4B 0.000000 0.000000 +67 chr10 + 978966 988683 ENST00000435531.1 3 407 ENSG00000229869.1 RP11-363N22.2 1.184275 1.701825 +68 chr10 - 1017097 1034281 ENST00000381466.1 2 1875 ENSG00000205740.1 AL359878.1 0.000000 0.000000 +69 chr10 + 1034338 1065876 ENST00000360803.4 17 4696 MSTRG.15 GTPBP4 320.545624 460.629974 +70 chr10 + 1034402 1056460 ENST00000491635.1 11 2223 MSTRG.15 GTPBP4 12.163368 17.478985 +71 chr10 + 1034402 1065876 ENST00000538293.1 16 4528 MSTRG.15 GTPBP4 52.889618 76.003357 +72 chr10 + 1034646 1043248 ENST00000360059.5 5 756 MSTRG.15 GTPBP4 0.000000 0.000000 +73 chr10 + 1034655 1065876 ENST00000545048.1 17 4800 MSTRG.15 GTPBP4 38.853710 55.833496 +74 chr10 + 1051778 1053260 ENST00000491261.1 2 373 MSTRG.15 GTPBP4 3.445400 4.951103 +75 chr10 + 1058340 1065876 ENST00000483839.2 4 3335 MSTRG.15 GTPBP4 0.000000 0.000000 +76 chr10 - 1064847 1071799 ENST00000277517.1 5 1359 MSTRG.16 IDI2 0.000000 0.000000 +77 chr10 + 1068606 1090138 ENST00000536039.1 3 893 MSTRG.17 IDI2-AS1 0.000000 0.000000 +78 chr10 + 1068608 1090138 ENST00000420381.1 5 1187 MSTRG.17 IDI2-AS1 1.544000 2.218756 +79 chr10 + 1068608 1090138 ENST00000428780.2 4 1054 MSTRG.17 IDI2-AS1 0.000000 0.000000 +80 chr10 + 1068614 1081916 ENST00000434470.1 3 490 MSTRG.17 IDI2-AS1 0.000000 0.000000 +81 chr10 - 1085848 1095110 ENST00000381344.3 5 2301 MSTRG.18 IDI1 352.342163 506.322174 +82 chr10 - 1086843 1095110 ENST00000491735.1 4 1133 MSTRG.18 IDI1 11.706373 16.822273 +83 chr10 - 1088233 1088295 ENST00000459467.1 1 63 MSTRG.19 RNU7-163P 4.873016 7.002614 +84 chr10 - 1088489 1094803 ENST00000427898.1 3 907 MSTRG.18 IDI1 3.272352 4.702430 +85 chr10 - 1088572 1095110 ENST00000429642.1 4 1304 MSTRG.18 IDI1 0.000000 0.000000 +86 chr10 - 1088617 1095110 ENST00000482091.1 3 1264 MSTRG.18 IDI1 11.231380 16.139700 +87 chr10 + 1095478 1178557 ENST00000358220.1 14 4902 MSTRG.20 WDR37 9.609295 13.808734 +88 chr10 - 1095714 1102356 MSTRG.21.1 3 4349 MSTRG.21 . 4.280029 6.150480 +89 chr10 - 1096197 1102356 MSTRG.21.2 2 4097 MSTRG.21 . 13.727667 19.726912 +90 chr10 - 1096232 1100338 MSTRG.21.3 2 1740 MSTRG.21 . 0.000000 0.000000 +91 chr10 + 1102293 1178557 MSTRG.20.2 14 4826 MSTRG.20 . 0.000000 0.000000 +92 chr10 + 1102344 1142566 ENST00000381329.1 9 1307 MSTRG.20 WDR37 2.602165 3.739359 +93 chr10 + 1102344 1178557 MSTRG.20.3 14 4962 MSTRG.20 . 1.144769 1.645054 +94 chr10 + 1102382 1178557 MSTRG.20.5 14 4921 MSTRG.20 . 20.984350 30.154900 +95 chr10 + 1102420 1178557 MSTRG.20.6 13 4708 MSTRG.20 . 9.800758 14.083870 +96 chr10 + 1102713 1178557 MSTRG.20.7 14 4997 MSTRG.20 . 27.800949 39.950478 +97 chr10 + 1102713 1178557 MSTRG.20.8 14 4908 MSTRG.20 . 12.443622 17.881714 +98 chr10 + 1102743 1178557 MSTRG.20.9 12 4498 MSTRG.20 . 6.015166 8.643905 +99 chr10 + 1102750 1178557 MSTRG.20.10 12 4580 MSTRG.20 . 17.927961 25.762810 +100 chr10 + 1102763 1178557 MSTRG.20.11 14 4855 MSTRG.20 . 8.659104 12.443294 +101 chr10 + 1102798 1178557 ENST00000263150.4 14 4909 MSTRG.20 WDR37 8.364925 12.020552 +102 chr10 + 1120323 1142186 ENST00000436154.1 8 714 MSTRG.20 WDR37 0.000000 0.000000 +103 chr10 + 1169747 1178557 ENST00000482165.1 4 3951 MSTRG.20 WDR37 1.258524 1.808522 +104 chr10 + 1205708 1210612 ENST00000425630.1 3 2434 ENSG00000229205.2 LINC00200 0.000000 0.000000 +105 chr10 + 1205744 1206937 ENST00000583117.1 2 632 ENSG00000229205.2 LINC00200 0.000000 0.000000 +106 chr10 - 1228073 1779670 ENST00000381312.1 10 3606 MSTRG.22 ADARB2 0.000000 0.000000 +107 chr10 - 1228074 1246325 ENST00000381310.3 3 1835 MSTRG.22 ADARB2 0.000000 0.000000 +108 chr10 - 1228785 1232506 ENST00000474762.1 3 768 MSTRG.22 ADARB2 0.000000 0.000000 +109 chr10 - 1228983 1234186 ENST00000490172.1 3 599 MSTRG.22 ADARB2 0.000000 0.000000 +110 chr10 - 1229091 1246325 ENST00000381305.1 4 703 MSTRG.22 ADARB2 0.000000 0.000000 +111 chr10 - 1245386 1246325 ENST00000477140.1 2 697 MSTRG.22 ADARB2 0.000000 0.000000 +112 chr10 - 1261616 1282593 ENST00000469464.1 3 1741 MSTRG.22 ADARB2 1.686962 2.424196 +113 chr10 - 1403196 1403832 ENST00000432987.1 2 359 MSTRG.23 RP11-398B16.2 0.000000 0.000000 +114 chr10 + 1568832 1599179 ENST00000421697.2 2 637 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +115 chr10 + 1568958 1577868 ENST00000381301.3 3 625 MSTRG.24 ADARB2-AS1 0.000000 0.000000 +116 chr10 - 2047667 2056542 ENST00000413603.1 3 2097 ENSG00000234962.1 LINC00700 0.000000 0.000000 +117 chr10 - 2054459 2056542 ENST00000438372.1 3 777 ENSG00000234962.1 LINC00700 0.000000 0.000000 +118 chr10 - 2054847 2055605 ENST00000454424.1 2 484 ENSG00000234962.1 LINC00700 0.000000 0.000000 +119 chr10 + 2114039 2123291 ENST00000435539.1 2 432 ENSG00000226694.2 RP11-69C17.2 0.000000 0.000000 +120 chr10 + 2140361 2140463 ENST00000517189.1 1 103 ENSG00000252998.1 RNU6-889P 0.000000 0.000000 +121 chr10 + 2208526 2211654 ENST00000421077.1 2 2321 ENSG00000227912.1 RP11-69C17.3 0.000000 0.000000 +122 chr10 - 2211334 2231668 ENST00000418524.2 5 587 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +123 chr10 - 2211341 2218626 ENST00000436003.2 2 196 ENSG00000231326.2 RP11-69C17.4 0.000000 0.000000 +124 chr10 + 2241581 2241682 ENST00000390854.1 1 102 ENSG00000212156.1 RNU6-576P 0.000000 0.000000 +125 chr10 - 2347277 2357269 ENST00000418295.1 3 742 ENSG00000234556.1 LINC00701 0.000000 0.000000 +126 chr10 - 2488447 2489546 ENST00000414107.1 2 756 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +127 chr10 - 2488447 2489546 ENST00000441907.1 2 764 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +128 chr10 - 2488452 2489546 ENST00000439973.1 2 714 ENSG00000234170.1 RP11-446F3.2 0.000000 0.000000 +129 chr10 - 2495329 2495418 ENST00000580586.1 1 90 ENSG00000264261.1 AC024908.1 0.000000 0.000000 +130 chr10 + 2541913 2542762 ENST00000431209.1 2 332 ENSG00000237500.1 RP11-526P5.1 0.000000 0.000000 +131 chr10 + 2543975 2609431 ENST00000438753.1 2 918 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +132 chr10 + 2543995 2579817 ENST00000437289.1 2 320 ENSG00000235281.1 RP11-526P5.2 0.000000 0.000000 +133 chr10 + 2978213 2978633 ENST00000419388.1 1 421 ENSG00000231743.1 RP11-89K18.1 0.000000 0.000000 +134 chr10 + 3052723 3055303 ENST00000439575.1 3 608 ENSG00000234182.1 RP11-118K6.2 0.000000 0.000000 +135 chr10 - 3107576 3109169 MSTRG.25.1 2 1232 MSTRG.25 . 5.385192 7.738620 +136 chr10 - 3107616 3108582 ENST00000607898.1 1 967 MSTRG.25 RP11-118K6.3 1.942548 2.791477 +137 chr10 + 3108525 3143746 ENST00000607886.1 4 432 MSTRG.26 PFKP 0.000000 0.000000 +138 chr10 + 3109712 3178985 ENST00000381125.4 22 2645 MSTRG.26 PFKP 984.424072 1414.635498 +139 chr10 + 3109864 3111581 ENST00000495715.1 2 152 MSTRG.26 PFKP 0.000000 0.000000 +140 chr10 + 3110819 3178985 ENST00000381075.2 24 2769 MSTRG.26 PFKP 0.000000 0.000000 +141 chr10 + 3111425 3146136 ENST00000421751.1 5 665 MSTRG.26 PFKP 6.714399 9.648715 +142 chr10 + 3112437 3147693 ENST00000407806.2 7 733 MSTRG.26 PFKP 1.014142 1.457341 +143 chr10 + 3146916 3155710 ENST00000415005.1 8 1142 MSTRG.26 PFKP 7.444289 10.697580 +144 chr10 + 3146939 3151672 ENST00000468050.1 6 511 MSTRG.26 PFKP 0.000000 0.000000 +145 chr10 + 3147071 3149501 ENST00000460445.1 3 628 MSTRG.26 PFKP 3.309717 4.756124 +146 chr10 + 3155650 3172175 ENST00000413079.1 5 538 MSTRG.26 PFKP 11.192021 16.083141 +147 chr10 + 3171199 3178985 ENST00000381072.1 6 1698 MSTRG.26 PFKP 19.483761 27.998524 +148 chr10 + 3175427 3179904 ENST00000433193.1 4 453 MSTRG.26 PFKP 2.750715 3.952828 +149 chr10 - 3179920 3180807 ENST00000490510.1 2 778 MSTRG.27 PITRM1 2.694618 3.872216 +150 chr10 - 3179920 3191591 ENST00000464395.1 9 3240 MSTRG.27 PITRM1 76.154961 109.436089 +151 chr10 - 3179920 3215003 MSTRG.27.1 25 3258 MSTRG.27 . 264.538727 380.147034 +152 chr10 - 3179922 3215003 ENST00000224949.4 27 3454 MSTRG.27 PITRM1 251.976044 362.094208 +153 chr10 - 3179922 3215003 ENST00000380989.2 27 3457 MSTRG.27 PITRM1 105.260788 151.261688 +154 chr10 - 3179926 3200345 ENST00000380994.1 16 2645 MSTRG.27 PITRM1 8.042593 11.557354 +155 chr10 - 3180016 3215003 ENST00000451104.2 24 3059 MSTRG.27 PITRM1 0.000000 0.000000 +156 chr10 - 3180883 3186558 ENST00000455371.1 4 673 MSTRG.27 PITRM1 4.749020 6.824430 +157 chr10 - 3183700 3190255 ENST00000451454.1 7 883 MSTRG.27 PITRM1 6.979436 10.029578 +158 chr10 + 3183824 3206477 ENST00000601046.1 4 577 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +159 chr10 + 3183824 3210164 ENST00000598280.1 4 601 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +160 chr10 + 3183864 3190814 ENST00000441377.1 4 3998 MSTRG.28 PITRM1-AS1 2.137172 3.071156 +161 chr10 + 3185241 3190814 ENST00000430356.2 3 3823 MSTRG.28 PITRM1-AS1 0.000000 0.000000 +162 chr10 - 3185675 3187908 ENST00000424714.1 3 489 MSTRG.27 PITRM1 6.258653 8.993800 +163 chr10 - 3193368 3201234 ENST00000430362.1 6 802 MSTRG.27 PITRM1 2.099762 3.017397 +164 chr10 - 3205324 3207526 ENST00000488065.1 2 851 MSTRG.27 PITRM1 6.724733 9.663566 +165 chr10 + 3266008 3269599 ENST00000445932.1 3 597 ENSG00000236968.1 RP11-298E9.5 0.000000 0.000000 +166 chr10 - 3282563 3299466 ENST00000417149.1 4 454 MSTRG.29 RP11-298E9.6 1.055066 1.516149 +167 chr10 + 3291138 3291944 MSTRG.30.1 2 618 MSTRG.30 . 0.000000 0.000000 +168 chr10 + 3308195 3309207 ENST00000436340.1 2 463 ENSG00000227338.1 RP11-195B3.1 0.000000 0.000000 +169 chr10 - 3474575 3478062 MSTRG.31.1 3 2349 MSTRG.31 . 7.872286 11.312620 +170 chr10 + 3494616 3543443 MSTRG.32.1 2 851 MSTRG.32 . 4.050529 5.820685 +171 chr10 - 3529086 3545030 ENST00000413993.1 5 832 MSTRG.33 RP11-482E14.1 0.000000 0.000000 +172 chr10 - 3574286 3579223 ENST00000426811.1 2 430 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +173 chr10 - 3577304 3579049 ENST00000413757.1 2 372 ENSG00000236892.1 RP11-482E14.2 0.000000 0.000000 +174 chr10 - 3599384 3614279 MSTRG.34.1 3 496 MSTRG.34 . 1.282258 1.842628 +175 chr10 - 3710520 3710836 MSTRG.35.1 1 317 MSTRG.35 . 1.164038 1.672744 +176 chr10 + 3793259 3805418 ENST00000421629.2 6 759 ENSG00000229672.2 RP11-184A2.3 0.000000 0.000000 +177 chr10 + 3810107 3810943 ENST00000415358.1 2 313 ENSG00000228353.1 RP11-184A2.2 0.000000 0.000000 +178 chr10 - 3818188 3822421 ENST00000461124.1 3 776 MSTRG.36 KLF6 0.000000 0.000000 +179 chr10 - 3818188 3827473 ENST00000497571.1 4 4662 MSTRG.36 KLF6 895.384399 1286.683960 +180 chr10 - 3818189 3827473 ENST00000542957.1 3 4537 MSTRG.36 KLF6 79.068100 113.622322 +181 chr10 - 3821239 3824406 ENST00000173785.4 3 1088 MSTRG.36 KLF6 0.000000 0.000000 +182 chr10 - 3821742 3823832 ENST00000492125.1 2 1576 MSTRG.36 KLF6 41.300213 59.349171 +183 chr10 - 3822519 3827473 ENST00000469435.1 2 2257 MSTRG.36 KLF6 51.658821 74.234680 +184 chr10 - 3824000 3827473 ENST00000380946.3 3 842 MSTRG.36 KLF6 5.598501 8.045150 +185 chr10 + 3827756 3829407 MSTRG.37.1 1 1652 MSTRG.37 . 0.000000 0.000000 +186 chr10 + 3876142 3876920 ENST00000413339.1 2 536 ENSG00000230573.1 RP11-464C19.2 0.000000 0.000000 +187 chr10 + 3976711 3978005 ENST00000432452.2 2 591 ENSG00000226005.3 RP11-464C19.3 0.000000 0.000000 +188 chr10 + 4067132 4070586 ENST00000455525.1 2 633 ENSG00000227101.1 RP11-433J20.2 0.000000 0.000000 +189 chr10 + 4093918 4131205 ENST00000455199.1 4 2287 ENSG00000236990.1 RP11-433J20.1 0.000000 0.000000 +190 chr10 - 4243333 4286104 ENST00000608792.1 3 6300 MSTRG.38 LINC00702 13.703058 19.691547 +191 chr10 - 4277752 4285879 ENST00000454470.1 2 407 MSTRG.38 LINC00702 6.098296 8.763364 +192 chr10 - 4277752 4286104 MSTRG.38.2 3 497 MSTRG.38 . 0.000000 0.000000 +193 chr10 - 4285142 4285981 ENST00000418372.1 2 446 MSTRG.38 LINC00702 21.606913 31.049532 +194 chr10 + 4289424 4299004 MSTRG.39.1 2 1122 MSTRG.39 . 17.994652 25.858646 +195 chr10 + 4426438 4452804 ENST00000454152.1 2 2390 ENSG00000224382.1 LINC00703 0.000000 0.000000 +196 chr10 + 4448694 4451443 ENST00000434902.1 2 869 ENSG00000224382.1 LINC00703 0.000000 0.000000 +197 chr10 - 4457497 4468371 ENST00000420082.1 4 691 ENSG00000230096.1 RP11-34C15.2 0.000000 0.000000 +198 chr10 + 4557144 4557249 ENST00000384396.1 1 106 ENSG00000207124.1 RNU6-163P 0.000000 0.000000 +199 chr10 - 4621911 4720444 MSTRG.40.1 3 2062 MSTRG.40 . 4.252950 6.111568 +200 chr10 - 4692377 4720444 ENST00000430998.2 4 1576 MSTRG.40 LINC00704 10.000587 14.371029 +201 chr10 - 4693295 4699117 ENST00000443994.1 3 543 MSTRG.40 LINC00704 2.247685 3.229964 +202 chr10 - 4693353 4720444 ENST00000449712.1 5 823 MSTRG.40 LINC00704 0.000000 0.000000 +203 chr10 + 4697619 4704611 ENST00000417883.2 3 1745 MSTRG.41 LINC00705 0.000000 0.000000 +204 chr10 - 4728501 4729798 MSTRG.42.1 3 423 MSTRG.42 . 1.316785 1.892244 +205 chr10 - 4787905 4809844 MSTRG.43.1 3 4588 MSTRG.43 . 2.322997 3.338190 +206 chr10 - 4787905 4823145 MSTRG.43.2 3 3442 MSTRG.43 . 2.871098 4.125821 +207 chr10 - 4788110 4809844 MSTRG.43.4 3 2522 MSTRG.43 . 0.000000 0.000000 +208 chr10 - 4788110 4823145 MSTRG.43.3 3 1354 MSTRG.43 . 0.000000 0.000000 +209 chr10 - 4790140 4809844 MSTRG.43.5 2 3691 MSTRG.43 . 0.000000 0.000000 +210 chr10 - 4799235 4809844 MSTRG.43.6 2 3857 MSTRG.43 . 2.701176 3.881639 +211 chr10 + 4828821 4879775 ENST00000533295.1 6 754 MSTRG.44 AKR1E2 0.000000 0.000000 +212 chr10 + 4828901 4882018 ENST00000462718.3 6 693 MSTRG.44 AKR1E2 0.000000 0.000000 +213 chr10 + 4868330 4890575 MSTRG.44.3 7 2727 MSTRG.44 . 1.069825 1.537358 +214 chr10 + 4868359 4883976 MSTRG.44.4 6 3318 MSTRG.44 . 0.000000 0.000000 +215 chr10 + 4868369 4890575 ENST00000474119.1 10 1947 MSTRG.44 AKR1E2 0.000000 0.000000 +216 chr10 + 4868426 4890575 ENST00000463345.1 10 1976 MSTRG.44 AKR1E2 5.026712 7.223478 +217 chr10 + 4868430 4889491 MSTRG.44.7 7 861 MSTRG.44 . 0.000000 0.000000 +218 chr10 + 4868446 4890575 ENST00000298375.7 10 1887 MSTRG.44 AKR1E2 6.430879 9.241292 +219 chr10 + 4868447 4888733 ENST00000525281.1 6 1383 MSTRG.44 AKR1E2 0.000000 0.000000 +220 chr10 + 4868478 4879773 ENST00000525627.1 3 334 MSTRG.44 AKR1E2 0.000000 0.000000 +221 chr10 + 4868488 4888733 MSTRG.44.16 9 3214 MSTRG.44 . 3.838303 5.515712 +222 chr10 + 4868488 4889491 ENST00000532248.1 7 847 MSTRG.44 AKR1E2 0.000000 0.000000 +223 chr10 + 4868488 4889491 MSTRG.44.11 8 1894 MSTRG.44 . 2.584940 3.714607 +224 chr10 + 4868488 4890575 ENST00000334019.4 8 1674 MSTRG.44 AKR1E2 2.157890 3.100928 +225 chr10 + 4868488 4890575 ENST00000345253.5 7 1551 MSTRG.44 AKR1E2 0.000000 0.000000 +226 chr10 + 4868488 4890575 MSTRG.44.12 8 2029 MSTRG.44 . 0.000000 0.000000 +227 chr10 + 4868488 4890575 MSTRG.44.13 10 1897 MSTRG.44 . 1.155609 1.660631 +228 chr10 + 4868488 4995278 MSTRG.44.14 15 2744 MSTRG.44 . 1.112636 1.598879 +229 chr10 + 4868488 4995278 MSTRG.44.17 14 1627 MSTRG.44 . 0.000000 0.000000 +230 chr10 + 4868488 5025475 MSTRG.44.15 20 9882 MSTRG.44 . 2.923333 4.200883 +231 chr10 + 4875547 4888733 ENST00000441590.1 5 1218 MSTRG.44 AKR1E2 0.000000 0.000000 +232 chr10 + 4875592 4884049 ENST00000525572.1 5 506 MSTRG.44 AKR1E2 0.000000 0.000000 +233 chr10 + 4881976 4889679 ENST00000487985.1 4 523 MSTRG.44 AKR1E2 0.000000 0.000000 +234 chr10 - 4914093 4934167 ENST00000432950.1 9 983 MSTRG.45 AKR1C6P 0.000000 0.000000 +235 chr10 - 4927673 4934167 ENST00000281339.5 5 495 MSTRG.45 AKR1C6P 0.000000 0.000000 +236 chr10 + 4934796 5025475 ENST00000434459.2 14 7354 MSTRG.44 AKR1C1 0.000000 0.000000 +237 chr10 - 5004628 5004760 ENST00000459095.1 1 133 MSTRG.46 U8 0.000000 0.000000 +238 chr10 + 5005445 5025475 ENST00000380872.4 9 6705 MSTRG.44 AKR1C1 1.581367 2.272454 +239 chr10 + 5005445 5025475 ENST00000477661.1 8 7970 MSTRG.44 AKR1C1 0.000000 0.000000 +240 chr10 + 5005641 5014941 ENST00000442997.1 7 746 MSTRG.44 AKR1C1 1.453912 2.089298 +241 chr10 + 5005981 5012133 ENST00000380859.1 6 858 MSTRG.44 AKR1C1 0.000000 0.000000 +242 chr10 + 5007683 5010500 ENST00000476100.1 2 1973 MSTRG.44 AKR1C1 0.000000 0.000000 +243 chr10 - 5029967 5046215 ENST00000380753.4 9 3381 MSTRG.47 AKR1C2 2.218520 3.188054 +244 chr10 - 5029967 5060223 MSTRG.47.1 12 3914 MSTRG.47 . 0.000000 0.000000 +245 chr10 - 5030125 5060223 MSTRG.47.3 9 3083 MSTRG.47 . 0.000000 0.000000 +246 chr10 - 5031626 5046114 ENST00000421196.3 8 1543 MSTRG.47 AKR1C2 0.000000 0.000000 +247 chr10 - 5031966 5060223 ENST00000407674.1 11 1605 MSTRG.47 AKR1C2 0.000000 0.000000 +248 chr10 - 5031981 5046215 ENST00000460124.1 8 2639 MSTRG.47 AKR1C2 1.068123 1.534912 +249 chr10 + 5037680 5039586 ENST00000451575.2 3 445 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +250 chr10 - 5038026 5060223 ENST00000604507.1 7 821 MSTRG.47 AKR1C2 0.000000 0.000000 +251 chr10 + 5038074 5039586 ENST00000440414.1 3 316 MSTRG.48 RP11-499O7.7 0.000000 0.000000 +252 chr10 - 5042103 5046114 ENST00000455190.1 4 1006 MSTRG.47 AKR1C2 0.000000 0.000000 +253 chr10 - 5042495 5046114 ENST00000604184.1 4 614 MSTRG.47 AKR1C2 0.000000 0.000000 +254 chr10 + 5046902 5047034 ENST00000459141.1 1 133 MSTRG.49 U8 0.000000 0.000000 +255 chr10 - 5048187 5060223 ENST00000604428.1 4 600 MSTRG.47 AKR1C2 0.000000 0.000000 +256 chr10 - 5048654 5060223 ENST00000604711.1 4 673 MSTRG.47 AKR1C2 0.000000 0.000000 +257 chr10 - 5052655 5058084 ENST00000603073.1 3 579 MSTRG.47 AKR1C2 0.000000 0.000000 +258 chr10 - 5055499 5057426 ENST00000604439.1 2 646 MSTRG.47 AKR1C2 0.000000 0.000000 +259 chr10 + 5077263 5149878 MSTRG.50.1 11 1895 MSTRG.50 . 26.290062 37.779305 +260 chr10 + 5077263 5149878 MSTRG.50.2 10 1725 MSTRG.50 . 23.108467 33.207294 +261 chr10 + 5077263 5149878 MSTRG.50.3 10 1739 MSTRG.50 . 15.114638 21.720015 +262 chr10 + 5077546 5144402 ENST00000605781.1 6 859 MSTRG.50 AKR1C3 75.223793 108.097977 +263 chr10 + 5077546 5149878 MSTRG.50.4 10 1412 MSTRG.50 . 186.698792 268.289612 +264 chr10 + 5077549 5139742 ENST00000470862.2 6 1013 MSTRG.50 AKR1C3 0.000000 0.000000 +265 chr10 + 5077550 5139742 ENST00000480822.1 5 808 MSTRG.50 AKR1C3 16.656116 23.935146 +266 chr10 - 5090055 5090173 ENST00000515931.1 1 119 MSTRG.51 U8 0.000000 0.000000 +267 chr10 + 5090981 5141641 ENST00000602997.1 6 671 MSTRG.50 AKR1C3 6.805833 9.780107 +268 chr10 + 5091004 5093862 ENST00000451627.1 2 125 MSTRG.50 RP11-499O7.4 0.000000 0.000000 +269 chr10 + 5119830 5149878 ENST00000605149.1 9 1411 MSTRG.50 AKR1C3 3.885942 5.584170 +270 chr10 + 5119973 5149878 ENST00000439082.2 9 1268 MSTRG.50 AKR1C3 16.640226 23.912312 +271 chr10 - 5135600 5135735 ENST00000459536.1 1 136 MSTRG.52 U8 0.000000 0.000000 +272 chr10 + 5135985 5149878 ENST00000380554.3 9 1807 MSTRG.50 AKR1C3 293.000000 421.046387 +273 chr10 + 5136606 5140368 ENST00000480697.2 3 1026 MSTRG.50 AKR1C3 2.960330 4.254049 +274 chr10 + 5136610 5142085 ENST00000605322.1 3 846 MSTRG.50 AKR1C3 7.026147 10.096703 +275 chr10 + 5138337 5139742 ENST00000603312.1 2 550 MSTRG.50 AKR1C3 4.348256 6.248525 +276 chr10 + 5147467 5149878 ENST00000603484.1 2 629 MSTRG.50 AKR1C3 3.990956 5.735077 +277 chr10 + 5152190 5156102 MSTRG.53.1 1 3913 MSTRG.53 . 0.000000 0.000000 +278 chr10 - 5164279 5177418 ENST00000427165.1 5 609 MSTRG.54 AKR1C5P 0.000000 0.000000 +279 chr10 - 5164295 5166124 MSTRG.54.2 3 1240 MSTRG.54 . 0.000000 0.000000 +280 chr10 - 5179314 5227150 MSTRG.55.1 10 1363 MSTRG.55 . 1.457937 2.095082 +281 chr10 - 5196335 5202333 ENST00000473890.1 5 645 MSTRG.55 AKR1CL1 0.000000 0.000000 +282 chr10 - 5196655 5202333 ENST00000465430.1 3 1716 MSTRG.55 AKR1CL1 0.000000 0.000000 +283 chr10 - 5202775 5227150 ENST00000472691.1 5 595 MSTRG.55 AKR1CL1 0.000000 0.000000 +284 chr10 - 5202775 5227150 ENST00000488756.1 4 539 MSTRG.55 AKR1CL1 0.000000 0.000000 +285 chr10 - 5202775 5326531 MSTRG.55.4 16 3182 MSTRG.55 . 2.460634 3.535977 +286 chr10 - 5203694 5227150 ENST00000334314.3 4 498 MSTRG.55 AKR1CL1 0.000000 0.000000 +287 chr10 - 5226975 5244449 ENST00000445191.1 2 81 MSTRG.55 AKR1CL1 0.000000 0.000000 +288 chr10 + 5237425 5238914 ENST00000469875.2 2 837 MSTRG.56 AKR1C4 0.000000 0.000000 +289 chr10 + 5237426 5260912 ENST00000380448.1 11 1414 MSTRG.56 AKR1C4 0.000000 0.000000 +290 chr10 - 5237847 5237936 ENST00000516100.1 1 90 MSTRG.57 U8 0.000000 0.000000 +291 chr10 + 5238798 5260912 ENST00000263126.1 9 1194 MSTRG.56 AKR1C4 0.000000 0.000000 +292 chr10 + 5249132 5249705 ENST00000441452.1 1 574 MSTRG.58 RP11-445P17.6 0.000000 0.000000 +293 chr10 - 5257183 5333847 MSTRG.55.9 13 4052 MSTRG.55 . 0.000000 0.000000 +294 chr10 + 5276321 5305371 ENST00000428920.2 2 680 MSTRG.59 RP11-445P17.3 0.000000 0.000000 +295 chr10 - 5305897 5333847 MSTRG.55.10 11 2734 MSTRG.55 . 1.074888 1.544634 +296 chr10 - 5305973 5333847 MSTRG.55.11 10 2491 MSTRG.55 . 2.199861 3.161241 +297 chr10 - 5306256 5326531 MSTRG.55.12 8 1358 MSTRG.55 . 0.000000 0.000000 +298 chr10 - 5307136 5326531 MSTRG.55.13 6 2330 MSTRG.55 . 3.625299 5.209621 +299 chr10 - 5307996 5313416 ENST00000449457.1 2 909 MSTRG.55 RP11-445P17.8 0.000000 0.000000 +300 chr10 - 5317136 5330433 ENST00000305623.8 8 895 MSTRG.55 AKR1C7P 0.000000 0.000000 +301 chr10 - 5317169 5327975 ENST00000432689.2 6 685 MSTRG.55 AKR1C7P 0.000000 0.000000 +302 chr10 - 5319027 5326531 MSTRG.55.17 4 1603 MSTRG.55 . 3.441015 4.944802 +303 chr10 - 5346394 5346828 ENST00000451325.1 1 435 ENSG00000223987.1 RP11-445P17.5 0.000000 0.000000 +304 chr10 + 5406972 5416169 ENST00000380433.3 2 714 ENSG00000178473.5 UCN3 0.000000 0.000000 +305 chr10 - 5435061 5446793 ENST00000380419.3 4 1798 MSTRG.60 TUBAL3 1.441602 2.071609 +306 chr10 - 5435232 5446793 ENST00000479328.1 4 1507 MSTRG.60 TUBAL3 0.000000 0.000000 +307 chr10 + 5454514 5500426 ENST00000355029.4 12 3402 MSTRG.61 NET1 52.925678 76.055176 +308 chr10 + 5455752 5500426 ENST00000542715.1 12 3184 MSTRG.61 NET1 0.000000 0.000000 +309 chr10 + 5488572 5494883 ENST00000486354.1 4 622 MSTRG.61 NET1 0.000000 0.000000 +310 chr10 + 5488572 5496485 ENST00000449083.1 4 637 MSTRG.61 NET1 0.000000 0.000000 +311 chr10 + 5488574 5500426 ENST00000380359.3 10 3253 MSTRG.61 NET1 87.010193 125.035248 +312 chr10 + 5494382 5495116 ENST00000465087.1 2 403 MSTRG.61 NET1 1.390623 1.998351 +313 chr10 + 5496344 5498493 ENST00000484741.1 3 757 MSTRG.61 NET1 0.000000 0.000000 +314 chr10 - 5540658 5541533 ENST00000380332.3 1 876 ENSG00000178372.6 CALML5 0.000000 0.000000 +315 chr10 - 5556207 5565140 ENST00000543008.1 2 4531 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +316 chr10 - 5559244 5568209 ENST00000542093.1 3 560 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +317 chr10 - 5559332 5568204 ENST00000545372.1 4 579 ENSG00000205488.4 CALML3-AS1 0.000000 0.000000 +318 chr10 + 5566924 5568225 ENST00000315238.1 1 1302 ENSG00000178363.3 CALML3 0.000000 0.000000 +319 chr10 - 5566939 5567705 ENST00000442008.2 2 595 ENSG00000256462.1 RP11-116G8.5 0.000000 0.000000 +320 chr10 - 5592096 5592862 MSTRG.62.1 2 505 MSTRG.62 . 1.530693 2.199634 +321 chr10 - 5598987 5601960 MSTRG.63.1 3 464 MSTRG.63 . 2.331897 3.350979 +322 chr10 - 5636951 5638081 MSTRG.64.1 2 738 MSTRG.64 . 5.978176 8.590749 +323 chr10 - 5636954 5638081 ENST00000478294.1 2 697 MSTRG.64 RP13-463N16.6 9.961415 14.314738 +324 chr10 - 5650438 5652756 ENST00000425246.1 5 613 ENSG00000231483.1 RP11-336A10.5 0.000000 0.000000 +325 chr10 - 5658825 5660124 ENST00000427341.1 3 657 ENSG00000228951.1 RP11-336A10.4 0.000000 0.000000 +326 chr10 + 5666894 5667089 ENST00000441526.1 1 196 ENSG00000228685.1 RP11-336A10.7 0.000000 0.000000 +327 chr10 + 5673426 5673716 ENST00000495609.2 1 291 ENSG00000240577.2 RN7SL445P 0.000000 0.000000 +328 chr10 - 5680830 5683924 ENST00000493897.1 3 832 MSTRG.65 ASB13 0.000000 0.000000 +329 chr10 - 5680831 5708558 ENST00000357700.6 6 2716 MSTRG.65 ASB13 60.784775 87.348846 +330 chr10 - 5680831 5708558 ENST00000459912.1 7 2797 MSTRG.65 ASB13 2.397634 3.445444 +331 chr10 - 5680831 5708558 ENST00000479033.1 5 2565 MSTRG.65 ASB13 1.981424 2.847343 +332 chr10 - 5690935 5693531 ENST00000482921.1 2 489 MSTRG.65 ASB13 0.000000 0.000000 +333 chr10 + 5726801 5806473 ENST00000328090.5 21 9396 MSTRG.66 FAM208B 37.086357 53.293777 +334 chr10 + 5726801 5806473 MSTRG.66.1 24 9749 MSTRG.66 . 26.230122 37.693169 +335 chr10 + 5726801 5806473 MSTRG.66.2 23 9657 MSTRG.66 . 28.228144 40.564362 +336 chr10 + 5726801 5806473 MSTRG.66.3 21 9226 MSTRG.66 . 32.305397 46.423450 +337 chr10 + 5726801 5806473 MSTRG.66.4 24 9644 MSTRG.66 . 0.000000 0.000000 +338 chr10 + 5726801 5806473 MSTRG.66.5 20 9134 MSTRG.66 . 36.382660 52.282551 +339 chr10 + 5726801 5806473 MSTRG.66.6 22 9511 MSTRG.66 . 30.810694 44.275536 +340 chr10 + 5726801 5806473 MSTRG.66.7 23 9498 MSTRG.66 . 0.000000 0.000000 +341 chr10 + 5726905 5754502 ENST00000477043.1 3 514 MSTRG.66 FAM208B 0.000000 0.000000 +342 chr10 + 5726905 5756170 ENST00000473789.1 4 537 MSTRG.66 FAM208B 0.000000 0.000000 +343 chr10 + 5726911 5762631 ENST00000496681.1 4 522 MSTRG.66 FAM208B 0.000000 0.000000 +344 chr10 + 5726928 5762631 ENST00000480839.2 5 597 MSTRG.66 FAM208B 0.000000 0.000000 +345 chr10 + 5734779 5754881 ENST00000532424.1 4 479 MSTRG.66 FAM208B 0.000000 0.000000 +346 chr10 + 5741411 5751626 ENST00000482419.1 2 424 MSTRG.66 FAM208B 1.488609 2.139158 +347 chr10 + 5741456 5756170 ENST00000463468.1 4 560 MSTRG.66 FAM208B 0.000000 0.000000 +348 chr10 + 5751589 5756537 ENST00000527124.1 3 574 MSTRG.66 FAM208B 11.170350 16.051998 +349 chr10 - 5754137 5786030 ENST00000411512.2 2 736 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +350 chr10 - 5754383 5756386 ENST00000596567.1 2 945 MSTRG.67 RP11-336A10.2 0.000000 0.000000 +351 chr10 + 5768789 5773166 ENST00000532080.1 3 912 MSTRG.66 FAM208B 1.425918 2.049070 +352 chr10 + 5772625 5782460 ENST00000380270.3 2 1422 MSTRG.66 FAM208B 0.000000 0.000000 +353 chr10 + 5800892 5803764 ENST00000487196.1 2 576 MSTRG.66 FAM208B 0.000000 0.000000 +354 chr10 + 5802803 5806473 ENST00000459693.1 2 2611 MSTRG.66 FAM208B 1.587399 2.281122 +355 chr10 - 5807186 5855512 ENST00000380191.4 11 2412 MSTRG.68 GDI2 2239.250244 3217.843994 +356 chr10 - 5807192 5811352 ENST00000479928.1 3 2499 MSTRG.68 GDI2 14.622574 21.012907 +357 chr10 - 5807812 5827944 ENST00000447751.1 6 893 MSTRG.68 GDI2 99.346992 142.763458 +358 chr10 - 5807884 5855512 ENST00000380132.4 12 1797 MSTRG.68 GDI2 29.822819 42.855942 +359 chr10 - 5807917 5855512 ENST00000380181.3 10 1546 MSTRG.68 GDI2 129.854370 186.603134 +360 chr10 - 5815805 5855512 ENST00000456041.1 7 1080 MSTRG.68 GDI2 18.989735 27.288597 +361 chr10 + 5818034 5818821 ENST00000603087.1 1 788 MSTRG.69 NRBF2P5 0.000000 0.000000 +362 chr10 - 5827829 5855512 ENST00000418688.1 4 756 MSTRG.68 GDI2 0.000000 0.000000 +363 chr10 - 5827945 5856292 ENST00000608581.1 5 634 MSTRG.68 GDI2 23.167212 33.291710 +364 chr10 - 5827969 5884095 ENST00000380127.1 7 584 MSTRG.68 GDI2 0.000000 0.000000 +365 chr10 - 5836871 5855512 ENST00000609712.1 5 739 MSTRG.68 GDI2 0.000000 0.000000 +366 chr10 + 5855610 5858572 MSTRG.70.1 1 2963 MSTRG.70 . 3.611379 5.189618 +367 chr10 + 5855948 5858572 ENST00000608273.1 2 2444 MSTRG.70 RP11-318E3.9 0.000000 0.000000 +368 chr10 - 5902878 5931954 MSTRG.71.1 8 3707 MSTRG.71 . 7.213806 10.366372 +369 chr10 - 5902878 5931954 MSTRG.71.2 9 3232 MSTRG.71 . 8.690064 12.487782 +370 chr10 - 5902878 5931954 MSTRG.71.3 9 3684 MSTRG.71 . 3.593781 5.164330 +371 chr10 - 5903580 5931954 ENST00000380094.5 8 2831 MSTRG.71 ANKRD16 3.124532 4.490010 +372 chr10 - 5903768 5904654 ENST00000430852.1 2 586 MSTRG.71 RP11-318E3.4 0.000000 0.000000 +373 chr10 - 5918136 5931954 MSTRG.71.6 8 2285 MSTRG.71 . 9.259669 13.306315 +374 chr10 - 5920050 5931954 ENST00000380092.4 7 1766 MSTRG.71 ANKRD16 4.890580 7.027853 +375 chr10 - 5920085 5931954 ENST00000191063.8 6 1652 MSTRG.71 ANKRD16 1.296034 1.862425 +376 chr10 - 5924666 5930030 ENST00000492368.1 4 838 MSTRG.71 ANKRD16 1.529574 2.198026 +377 chr10 + 5931535 5979556 ENST00000397269.3 22 3665 MSTRG.72 FBXO18 0.000000 0.000000 +378 chr10 + 5932194 5979556 ENST00000362091.4 21 3560 MSTRG.72 FBXO18 72.675430 104.435928 +379 chr10 + 5932211 5953091 ENST00000470089.1 5 1153 MSTRG.72 FBXO18 3.927994 5.644600 +380 chr10 + 5932211 5979168 MSTRG.72.3 22 3206 MSTRG.72 . 8.521481 12.245525 +381 chr10 + 5932243 5948595 ENST00000462507.1 4 917 MSTRG.72 FBXO18 0.000000 0.000000 +382 chr10 + 5932243 5969504 MSTRG.72.7 20 2993 MSTRG.72 . 9.828551 14.123810 +383 chr10 + 5932243 5979556 MSTRG.72.5 20 3355 MSTRG.72 . 83.647957 120.203651 +384 chr10 + 5932243 5979556 MSTRG.72.6 23 4178 MSTRG.72 . 66.149750 95.058411 +385 chr10 + 5933788 5969504 MSTRG.72.9 19 8474 MSTRG.72 . 34.376980 49.400352 +386 chr10 + 5936349 5979556 ENST00000379999.5 22 3702 MSTRG.72 FBXO18 14.561121 20.924601 +387 chr10 + 5945129 5951257 ENST00000469009.1 5 943 MSTRG.72 FBXO18 1.621543 2.330187 +388 chr10 + 5948469 5951441 ENST00000494526.1 3 578 MSTRG.72 FBXO18 1.536180 2.207519 +389 chr10 + 5956141 5957907 ENST00000460453.1 2 634 MSTRG.72 FBXO18 9.847312 14.150769 +390 chr10 + 5959025 5959639 ENST00000489042.1 2 533 MSTRG.72 FBXO18 1.696595 2.438038 +391 chr10 + 5963309 5966471 ENST00000475867.1 3 1022 MSTRG.72 FBXO18 3.681336 5.290147 +392 chr10 + 5963317 5979168 ENST00000461504.1 9 912 MSTRG.72 FBXO18 2.652528 3.811732 +393 chr10 + 5965534 5969504 ENST00000485290.1 4 557 MSTRG.72 FBXO18 0.000000 0.000000 +394 chr10 + 5967227 5969504 ENST00000496013.1 2 336 MSTRG.72 FBXO18 3.751391 5.390818 +395 chr10 + 5967374 5970636 ENST00000479433.1 3 527 MSTRG.72 FBXO18 1.329598 1.910657 +396 chr10 + 5967374 5971829 ENST00000470353.1 3 681 MSTRG.72 FBXO18 2.194322 3.153281 +397 chr10 - 5976233 5987876 ENST00000397264.4 2 3499 MSTRG.73 RP11-536K7.3 0.000000 0.000000 +398 chr10 - 5977257 5987876 MSTRG.73.2 2 615 MSTRG.73 . 0.000000 0.000000 +399 chr10 + 5978596 5979556 ENST00000481029.1 2 486 MSTRG.72 FBXO18 0.000000 0.000000 +400 chr10 - 5985453 5987876 ENST00000448685.1 2 685 MSTRG.73 RP11-536K7.3 1.303085 1.872557 +401 chr10 - 5985467 5987876 ENST00000454321.1 2 545 MSTRG.73 RP11-536K7.3 1.342092 1.928611 +402 chr10 - 5990855 6002530 ENST00000435171.2 4 659 MSTRG.74 IL15RA 0.000000 0.000000 +403 chr10 - 5990898 6010891 MSTRG.74.2 6 5050 MSTRG.74 . 8.424643 12.106367 +404 chr10 - 5990898 6010891 MSTRG.74.3 7 5029 MSTRG.74 . 5.767265 8.287665 +405 chr10 - 5990938 6019177 MSTRG.74.5 6 5123 MSTRG.74 . 4.894349 7.033270 +406 chr10 - 5990938 6020150 MSTRG.74.4 8 5520 MSTRG.74 . 0.000000 0.000000 +407 chr10 - 5994142 6020150 MSTRG.74.6 7 2163 MSTRG.74 . 3.865592 5.554927 +408 chr10 - 5994334 6019739 ENST00000379977.3 7 1812 MSTRG.74 IL15RA 7.129280 10.244906 +409 chr10 - 5994335 6019739 ENST00000397248.2 7 1811 MSTRG.74 IL15RA 7.349908 10.561954 +410 chr10 - 5994335 6019739 ENST00000397251.3 6 1616 MSTRG.74 IL15RA 0.000000 0.000000 +411 chr10 - 5994344 6020150 ENST00000525219.2 7 1841 MSTRG.74 IL15RA 6.215803 8.932224 +412 chr10 - 5994349 6020150 ENST00000534292.1 7 1836 MSTRG.74 IL15RA 5.635229 8.097928 +413 chr10 - 5994356 6020150 ENST00000379972.2 6 1631 MSTRG.74 IL15RA 0.000000 0.000000 +414 chr10 - 5994356 6020150 ENST00000532948.1 6 1730 MSTRG.74 IL15RA 3.697954 5.314028 +415 chr10 - 5994756 6019739 ENST00000528354.1 6 1291 MSTRG.74 IL15RA 0.000000 0.000000 +416 chr10 - 5994784 6005801 ENST00000447291.1 5 912 MSTRG.74 IL15RA 0.000000 0.000000 +417 chr10 - 5994861 6020150 ENST00000379974.1 5 1030 MSTRG.74 IL15RA 1.158562 1.664875 +418 chr10 - 5995008 6008302 ENST00000532039.1 6 679 MSTRG.74 IL15RA 0.000000 0.000000 +419 chr10 - 5995014 6019739 ENST00000397250.2 5 838 MSTRG.74 IL15RA 0.000000 0.000000 +420 chr10 - 5995115 6019739 ENST00000379971.1 5 857 MSTRG.74 IL15RA 0.000000 0.000000 +421 chr10 - 5995223 6019739 ENST00000397255.3 7 1043 MSTRG.74 IL15RA 0.000000 0.000000 +422 chr10 - 5995223 6019739 ENST00000530685.1 6 944 MSTRG.74 IL15RA 0.000000 0.000000 +423 chr10 - 5998341 6020150 ENST00000397246.3 7 1180 MSTRG.74 IL15RA 0.000000 0.000000 +424 chr10 - 6001717 6019739 ENST00000429135.2 4 801 MSTRG.74 IL15RA 0.000000 0.000000 +425 chr10 - 6002358 6019177 ENST00000453922.1 4 730 MSTRG.74 IL15RA 0.000000 0.000000 +426 chr10 - 6052652 6104288 ENST00000379959.3 8 3176 ENSG00000134460.11 IL2RA 0.000000 0.000000 +427 chr10 - 6054034 6104272 ENST00000379954.1 7 1562 ENSG00000134460.11 IL2RA 0.000000 0.000000 +428 chr10 - 6054760 6104253 ENST00000256876.6 8 1006 ENSG00000134460.11 IL2RA 0.000000 0.000000 +429 chr10 - 6059017 6059157 ENST00000516113.1 1 141 ENSG00000251922.1 SNORA14 0.000000 0.000000 +430 chr10 - 6061416 6067964 ENST00000447847.1 3 326 ENSG00000134460.11 IL2RA 0.000000 0.000000 +431 chr10 + 6067941 6078390 ENST00000440436.1 3 480 ENSG00000229664.1 RP11-536K7.5 0.000000 0.000000 +432 chr10 - 6113477 6113881 ENST00000397237.2 1 405 ENSG00000214015.3 RP11-414H17.2 0.000000 0.000000 +433 chr10 + 6130950 6159420 ENST00000379888.4 12 3332 MSTRG.75 RBM17 78.955704 113.460800 +434 chr10 + 6130962 6159420 MSTRG.75.2 12 4027 MSTRG.75 . 178.833801 256.987457 +435 chr10 + 6131017 6154324 ENST00000437845.2 7 873 MSTRG.75 RBM17 0.000000 0.000000 +436 chr10 + 6131034 6152090 ENST00000432931.1 7 842 MSTRG.75 RBM17 0.000000 0.000000 +437 chr10 + 6131309 6159420 ENST00000446108.1 12 3751 MSTRG.75 RBM17 0.000000 0.000000 +438 chr10 + 6138873 6152090 ENST00000418631.1 6 860 MSTRG.75 RBM17 1.384219 1.989148 +439 chr10 + 6146909 6148340 ENST00000467214.1 2 389 MSTRG.75 RBM17 10.444517 15.008965 +440 chr10 + 6146934 6154664 ENST00000447032.1 5 916 MSTRG.75 RBM17 35.163380 50.530422 +441 chr10 + 6150451 6154664 ENST00000481147.1 3 889 MSTRG.75 RBM17 14.578410 20.949444 +442 chr10 + 6154665 6159420 ENST00000476706.1 5 2618 MSTRG.75 RBM17 11.901086 17.102079 +443 chr10 + 6155326 6159420 ENST00000465906.1 3 2537 MSTRG.75 RBM17 11.876053 17.066107 +444 chr10 + 6155870 6159420 ENST00000467080.1 2 2460 MSTRG.75 RBM17 1.187659 1.706688 +445 chr10 + 6156110 6159420 ENST00000496762.1 2 3170 MSTRG.75 RBM17 5.281802 7.590047 +446 chr10 + 6171977 6172984 MSTRG.76.1 2 758 MSTRG.76 . 2.774406 3.986872 +447 chr10 + 6186881 6277495 ENST00000536985.1 12 3923 MSTRG.77 PFKFB3 2.975409 4.275718 +448 chr10 + 6186897 6277495 ENST00000379789.4 15 4157 MSTRG.77 PFKFB3 115.278717 165.657639 +449 chr10 + 6188279 6277495 ENST00000540253.1 15 4258 MSTRG.77 PFKFB3 0.000000 0.000000 +450 chr10 + 6191586 6191903 ENST00000364711.1 1 318 MSTRG.78 RN7SKP78 0.000000 0.000000 +451 chr10 + 6194159 6194240 ENST00000577482.1 1 82 MSTRG.79 MIR3155A 0.000000 0.000000 +452 chr10 - 6239575 6244656 ENST00000427630.1 2 438 MSTRG.80 RP11-414H17.5 0.000000 0.000000 +453 chr10 + 6244829 6270258 ENST00000317350.4 15 2010 MSTRG.77 PFKFB3 0.000000 0.000000 +454 chr10 + 6244829 6270258 ENST00000461744.1 16 2098 MSTRG.77 PFKFB3 0.000000 0.000000 +455 chr10 + 6244829 6277495 ENST00000379785.1 17 4623 MSTRG.77 PFKFB3 0.000000 0.000000 +456 chr10 + 6244829 6277495 ENST00000467491.1 18 4711 MSTRG.77 PFKFB3 1.111786 1.597657 +457 chr10 + 6244829 6277495 ENST00000477914.1 16 4636 MSTRG.77 PFKFB3 14.341893 20.609566 +458 chr10 + 6244829 6277495 ENST00000490474.1 17 4659 MSTRG.77 PFKFB3 9.124608 13.112230 +459 chr10 + 6244840 6273277 ENST00000379782.3 16 1974 MSTRG.77 PFKFB3 0.000000 0.000000 +460 chr10 + 6244863 6277495 ENST00000360521.2 16 4537 MSTRG.77 PFKFB3 77.282120 111.055840 +461 chr10 + 6244894 6277495 ENST00000379775.4 15 4483 MSTRG.77 PFKFB3 337.228546 484.603668 +462 chr10 + 6263367 6277495 ENST00000450232.1 5 3020 MSTRG.77 PFKFB3 16.404448 23.573494 +463 chr10 + 6264671 6268410 ENST00000487989.1 4 661 MSTRG.77 PFKFB3 6.878075 9.883921 +464 chr10 + 6266129 6277495 ENST00000414237.1 5 2955 MSTRG.77 PFKFB3 1.271591 1.827300 +465 chr10 + 6266129 6277495 ENST00000441697.1 2 2686 MSTRG.77 PFKFB3 3.922301 5.636419 +466 chr10 + 6266129 6277495 ENST00000475881.1 4 2978 MSTRG.77 PFKFB3 3.909275 5.617701 +467 chr10 - 6287694 6287794 ENST00000459607.1 1 101 ENSG00000238366.1 Y_RNA 0.000000 0.000000 +468 chr10 + 6319650 6377944 ENST00000399868.2 7 3086 MSTRG.81 RP11-563J2.2 0.000000 0.000000 +469 chr10 - 6335063 6336647 ENST00000440192.1 4 890 MSTRG.82 SDCBPP1 0.000000 0.000000 +470 chr10 + 6392278 6394723 ENST00000391437.1 1 2446 ENSG00000212743.1 DKFZP667F0711 0.000000 0.000000 +471 chr10 - 6469105 6622263 ENST00000263125.5 18 3285 MSTRG.83 PRKCQ 0.000000 0.000000 +472 chr10 - 6469134 6622263 ENST00000397176.2 17 3067 MSTRG.83 PRKCQ 0.000000 0.000000 +473 chr10 - 6469983 6622263 ENST00000539722.1 17 2346 MSTRG.83 PRKCQ 0.000000 0.000000 +474 chr10 + 6622381 6626261 ENST00000445427.1 2 1133 MSTRG.84 PRKCQ-AS1 1.516405 2.179102 +475 chr10 + 6622387 6626079 ENST00000455810.1 3 1009 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +476 chr10 + 6625638 6627674 ENST00000414894.1 2 398 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +477 chr10 + 6625641 6626261 ENST00000449648.1 2 422 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +478 chr10 + 6625767 6630358 ENST00000607982.1 3 677 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +479 chr10 + 6625767 6633059 ENST00000608526.1 5 666 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +480 chr10 + 6628186 6628882 ENST00000561822.1 1 697 MSTRG.84 PRKCQ-AS1 0.000000 0.000000 +481 chr10 + 6649249 6657912 ENST00000609627.1 3 378 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +482 chr10 + 6649283 6657921 ENST00000607996.1 5 531 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +483 chr10 + 6650310 6658414 ENST00000609346.1 4 938 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +484 chr10 + 6650338 6658359 ENST00000608453.1 3 587 ENSG00000237943.2 PRKCQ-AS1 0.000000 0.000000 +485 chr10 + 6660678 6667308 ENST00000448835.2 4 500 ENSG00000225948.2 RP11-554I8.1 0.000000 0.000000 +486 chr10 + 6779344 6780988 ENST00000417112.1 2 917 MSTRG.85 RP11-554I8.2 1.964013 2.822323 +487 chr10 - 6816341 6821132 MSTRG.86.1 2 617 MSTRG.86 . 0.000000 0.000000 +488 chr10 + 6821558 6884868 MSTRG.87.1 4 5454 MSTRG.87 . 5.832524 8.381444 +489 chr10 + 6821560 6884868 ENST00000436383.1 5 3070 MSTRG.87 LINC00707 3.579614 5.143971 +490 chr10 - 6867825 6868186 ENST00000451996.1 1 362 MSTRG.88 AL392086.1 0.000000 0.000000 +491 chr10 - 6933419 6962434 ENST00000457632.1 3 299 ENSG00000234248.1 RP11-799O21.2 0.000000 0.000000 +492 chr10 - 7100287 7100507 MSTRG.89.1 1 221 MSTRG.89 . 1.700881 2.444197 +493 chr10 + 7139114 7139637 ENST00000420049.1 2 436 ENSG00000223581.1 RP11-393K12.2 0.000000 0.000000 +494 chr10 + 7196082 7196198 ENST00000604136.1 1 117 ENSG00000270811.1 RP11-393K12.4 0.000000 0.000000 +495 chr10 - 7200586 7451303 ENST00000361972.4 21 7922 MSTRG.90 SFMBT2 0.000000 0.000000 +496 chr10 - 7200586 7452983 MSTRG.90.1 21 7852 MSTRG.90 . 22.094376 31.750025 +497 chr10 - 7200586 7452983 MSTRG.90.2 21 8043 MSTRG.90 . 5.382502 7.734755 +498 chr10 - 7200600 7452983 MSTRG.90.4 21 8049 MSTRG.90 . 0.000000 0.000000 +499 chr10 - 7204249 7453450 ENST00000397167.1 21 4363 MSTRG.90 SFMBT2 0.000000 0.000000 +500 chr10 - 7326144 7453450 ENST00000379713.3 5 2404 MSTRG.90 SFMBT2 0.000000 0.000000 +501 chr10 - 7337068 7337252 ENST00000421389.1 1 185 MSTRG.91 RP5-1092K5.2 0.000000 0.000000 +502 chr10 - 7390104 7450707 ENST00000379711.2 5 692 MSTRG.90 SFMBT2 0.000000 0.000000 +503 chr10 - 7390249 7453450 ENST00000397160.3 5 678 MSTRG.90 SFMBT2 0.000000 0.000000 +504 chr10 - 7487520 7513904 ENST00000420395.1 4 557 ENSG00000232591.1 RP5-1031D4.2 0.000000 0.000000 +505 chr10 - 7528665 7528771 ENST00000384722.1 1 107 ENSG00000207453.1 RNU6-535P 0.000000 0.000000 +506 chr10 + 7575169 7578527 ENST00000414631.1 3 714 ENSG00000230121.1 RP11-385N23.1 0.000000 0.000000 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ENST00000358415.4 21 3193 ENSG00000151655.13 ITIH2 0.000000 0.000000 +519 chr10 + 7745309 7755346 ENST00000473227.1 5 654 ENSG00000151655.13 ITIH2 0.000000 0.000000 +520 chr10 + 7745331 7762864 ENST00000480387.1 6 573 ENSG00000151655.13 ITIH2 0.000000 0.000000 +521 chr10 + 7745343 7763660 ENST00000429820.1 7 767 ENSG00000151655.13 ITIH2 0.000000 0.000000 +522 chr10 + 7745363 7791302 ENST00000379587.4 20 2848 ENSG00000151655.13 ITIH2 0.000000 0.000000 +523 chr10 + 7771828 7774436 ENST00000477751.1 3 591 ENSG00000151655.13 ITIH2 0.000000 0.000000 +524 chr10 - 7792925 7829990 ENST00000379562.4 13 6394 MSTRG.93 KIN 19.745865 28.375174 +525 chr10 - 7795188 7808066 ENST00000498098.1 6 817 MSTRG.93 KIN 0.000000 0.000000 +526 chr10 - 7795188 7829990 MSTRG.93.2 14 3782 MSTRG.93 . 17.509100 25.160898 +527 chr10 - 7795188 7829990 MSTRG.93.3 13 3687 MSTRG.93 . 5.426227 7.797588 +528 chr10 - 7795188 7829990 MSTRG.93.4 13 3684 MSTRG.93 . 5.678779 8.160510 +529 chr10 - 7795276 7829990 ENST00000535925.1 14 1618 MSTRG.93 KIN 22.324080 32.080112 +530 chr10 - 7797777 7808347 ENST00000463666.1 6 699 MSTRG.93 KIN 0.000000 0.000000 +531 chr10 - 7797798 7808347 ENST00000471320.1 5 910 MSTRG.93 KIN 0.000000 0.000000 +532 chr10 - 7801234 7829990 ENST00000543003.1 11 1737 MSTRG.93 KIN 0.000000 0.000000 +533 chr10 - 7803196 7816854 ENST00000460089.1 6 626 MSTRG.93 KIN 1.379004 1.981654 +534 chr10 + 7830092 7849778 ENST00000356708.7 10 1163 MSTRG.94 ATP5C1 595.167480 855.266663 +535 chr10 + 7830110 7849778 ENST00000493053.1 9 1110 MSTRG.94 ATP5C1 11.831765 17.002464 +536 chr10 + 7830122 7838551 ENST00000462760.1 2 573 MSTRG.94 ATP5C1 1.213936 1.744448 +537 chr10 + 7830138 7839009 ENST00000460362.1 3 565 MSTRG.94 ATP5C1 0.000000 0.000000 +538 chr10 + 7830140 7844838 ENST00000541227.1 7 907 MSTRG.94 ATP5C1 4.540144 6.524271 +539 chr10 + 7830140 7849778 ENST00000335698.4 9 1078 MSTRG.94 ATP5C1 1619.454956 2327.186768 +540 chr10 + 7830142 7849778 ENST00000465936.1 4 314 MSTRG.94 ATP5C1 0.000000 0.000000 +541 chr10 + 7830147 7844388 ENST00000460820.2 7 763 MSTRG.94 ATP5C1 0.000000 0.000000 +542 chr10 + 7830173 7841513 ENST00000472202.1 4 782 MSTRG.94 ATP5C1 28.384266 40.788715 +543 chr10 + 7842015 7849778 ENST00000473809.1 6 544 MSTRG.94 ATP5C1 2.895164 4.160404 +544 chr10 + 7844206 7849778 ENST00000480528.1 4 474 MSTRG.94 ATP5C1 1.626740 2.337655 +545 chr10 + 7860467 8058947 ENST00000344293.5 7 5229 MSTRG.95 TAF3 27.811340 39.965408 +546 chr10 + 7860475 8058947 MSTRG.95.2 7 5218 MSTRG.95 . 3.510448 5.044579 +547 chr10 - 7875581 7875920 ENST00000440219.1 1 340 MSTRG.96 RP11-401E9.3 2.305882 3.313595 +548 chr10 - 8092413 8095447 ENST00000355358.1 2 2214 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +549 chr10 - 8092439 8094458 ENST00000420815.1 3 650 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +550 chr10 - 8092439 8094458 ENST00000438755.1 3 675 ENSG00000197308.4 GATA3-AS1 0.000000 0.000000 +551 chr10 + 8093504 8095047 ENST00000418270.1 3 402 ENSG00000232638.1 RP11-379F12.4 0.000000 0.000000 +552 chr10 - 8094205 8095219 ENST00000417359.1 2 565 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +553 chr10 - 8094206 8095412 ENST00000458727.1 2 820 ENSG00000243350.1 RP11-379F12.3 0.000000 0.000000 +554 chr10 + 8095567 8097859 ENST00000481743.1 2 785 MSTRG.97 GATA3 0.000000 0.000000 +555 chr10 + 8095567 8117161 MSTRG.97.1 6 3054 MSTRG.97 . 0.000000 0.000000 +556 chr10 + 8095593 8117161 MSTRG.97.3 6 3025 MSTRG.97 . 0.000000 0.000000 +557 chr10 + 8096656 8117161 ENST00000379328.3 6 3078 MSTRG.97 GATA3 2.986254 4.291302 +558 chr10 + 8096769 8117161 ENST00000346208.3 6 2962 MSTRG.97 GATA3 0.000000 0.000000 +559 chr10 + 8100362 8117161 ENST00000461472.1 3 2029 MSTRG.97 GATA3 0.000000 0.000000 +560 chr10 + 8203223 8204155 ENST00000451976.1 1 933 ENSG00000225053.1 PRPF38AP1 0.000000 0.000000 +561 chr10 - 8301294 8302767 ENST00000454056.1 2 365 ENSG00000232170.1 LINC00708 0.000000 0.000000 +562 chr10 - 8301294 8310268 ENST00000428165.1 5 916 ENSG00000232170.1 LINC00708 0.000000 0.000000 +563 chr10 + 8340860 8343630 ENST00000413941.1 2 901 ENSG00000226861.1 RP5-1119O21.2 0.000000 0.000000 +564 chr10 + 8442823 8503826 ENST00000413286.1 4 430 ENSG00000226990.1 RP11-543F8.2 0.000000 0.000000 +565 chr10 + 8514682 8514915 ENST00000603398.1 1 234 ENSG00000271251.1 RP11-543F8.3 0.000000 0.000000 +566 chr10 - 8555650 8557069 ENST00000451609.1 1 1420 ENSG00000213771.3 KRT8P37 0.000000 0.000000 +567 chr10 + 8661896 8662571 ENST00000425516.1 1 676 ENSG00000236420.1 CHCHD3P1 0.000000 0.000000 +568 chr10 - 8698679 8698794 ENST00000391203.1 1 116 ENSG00000212505.1 RNA5SP299 0.000000 0.000000 +569 chr10 + 8765973 8766251 ENST00000605632.1 1 279 ENSG00000270234.1 RP11-575N15.1 0.000000 0.000000 +570 chr10 + 8939952 8956559 ENST00000447297.1 4 366 ENSG00000234752.1 RP11-428L9.1 0.000000 0.000000 +571 chr10 + 9012088 9015431 ENST00000456526.1 2 677 ENSG00000223808.1 RP11-428L9.2 0.000000 0.000000 +572 chr10 + 9317796 9329020 ENST00000458168.1 2 494 ENSG00000230014.1 LINC00709 0.000000 0.000000 +573 chr10 - 9763926 9766379 ENST00000450068.1 1 2454 ENSG00000235838.1 HSP90AB7P 0.000000 0.000000 +574 chr10 - 9800746 9801200 ENST00000419836.1 2 344 ENSG00000228636.1 RP5-1051H14.2 0.000000 0.000000 +575 chr10 + 10100685 10105465 ENST00000429539.1 4 575 ENSG00000224788.1 RP5-933E2.1 0.000000 0.000000 +576 chr10 + 10216193 10216528 ENST00000535261.1 1 336 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +577 chr10 + 10216193 10216540 ENST00000439303.1 1 348 ENSG00000229919.2 TCEB1P3 0.000000 0.000000 +578 chr10 + 10274574 10274675 ENST00000363979.1 1 102 ENSG00000200849.1 Y_RNA 0.000000 0.000000 +579 chr10 - 10299132 10299429 ENST00000606426.1 1 298 ENSG00000272436.1 CUX2P1 0.000000 0.000000 +580 chr10 - 10407143 10408450 ENST00000455871.1 2 335 ENSG00000234306.1 RP11-271F18.1 0.000000 0.000000 +581 chr10 - 10461501 10504312 ENST00000602311.1 4 505 ENSG00000270111.1 RP11-271F18.4 0.000000 0.000000 +582 chr10 - 10818186 10818624 ENST00000448495.1 1 439 ENSG00000228997.1 RP1-186E20.1 0.000000 0.000000 +583 chr10 - 10826400 10836959 ENST00000415590.2 4 656 MSTRG.98 SFTA1P 2.834581 4.073345 +584 chr10 - 10826400 10836959 ENST00000602763.1 4 636 MSTRG.98 SFTA1P 4.783260 6.873632 +585 chr10 - 10826401 10836959 ENST00000434919.2 3 481 MSTRG.98 SFTA1P 0.000000 0.000000 +586 chr10 - 10826402 10836959 ENST00000446372.2 4 775 MSTRG.98 SFTA1P 0.000000 0.000000 +587 chr10 - 10826413 10836959 MSTRG.98.5 4 784 MSTRG.98 . 1.886128 2.710401 +588 chr10 - 10969021 10988765 ENST00000600516.1 6 659 ENSG00000229240.3 LINC00710 0.000000 0.000000 +589 chr10 - 10976487 10994058 ENST00000428520.2 6 1460 ENSG00000229240.3 LINC00710 0.000000 0.000000 +590 chr10 - 10976903 10978626 ENST00000441855.1 2 514 ENSG00000229240.3 LINC00710 0.000000 0.000000 +591 chr10 - 10988010 10994143 ENST00000596092.1 5 1025 ENSG00000229240.3 LINC00710 0.000000 0.000000 +592 chr10 - 10988011 10994197 ENST00000601050.2 6 994 ENSG00000229240.3 LINC00710 0.000000 0.000000 +593 chr10 - 10988821 10994058 ENST00000450174.2 3 873 ENSG00000229240.3 LINC00710 0.000000 0.000000 +594 chr10 - 10989127 10994129 ENST00000598573.1 2 666 ENSG00000229240.3 LINC00710 0.000000 0.000000 +595 chr10 + 11002114 11012779 ENST00000420825.1 3 537 ENSG00000231496.1 RP1-251M9.2 0.000000 0.000000 +596 chr10 + 11047259 11378666 ENST00000379261.4 14 9233 ENSG00000048740.13 CELF2 0.000000 0.000000 +597 chr10 + 11047351 11373245 ENST00000416382.2 14 2398 ENSG00000048740.13 CELF2 0.000000 0.000000 +598 chr10 - 11052127 11053082 ENST00000437825.1 2 244 ENSG00000228027.1 RP1-251M9.3 0.000000 0.000000 +599 chr10 + 11059893 11378666 ENST00000450189.1 15 7982 ENSG00000048740.13 CELF2 0.000000 0.000000 +600 chr10 + 11060053 11373245 ENST00000542579.1 14 2437 ENSG00000048740.13 CELF2 0.000000 0.000000 +601 chr10 + 11060106 11373245 ENST00000399850.3 14 2384 ENSG00000048740.13 CELF2 0.000000 0.000000 +602 chr10 + 11060106 11373245 ENST00000417956.2 14 2378 ENSG00000048740.13 CELF2 0.000000 0.000000 +603 chr10 + 11072297 11072831 ENST00000428853.2 2 433 ENSG00000229206.2 RP11-397O4.1 0.000000 0.000000 +604 chr10 - 11117094 11140436 ENST00000432370.2 4 853 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +605 chr10 - 11139277 11140123 ENST00000420634.1 2 144 ENSG00000237986.2 CELF2-AS2 0.000000 0.000000 +606 chr10 + 11206993 11376357 ENST00000354440.2 13 7121 ENSG00000048740.13 CELF2 0.000000 0.000000 +607 chr10 + 11206993 11378666 ENST00000427450.1 15 8036 ENSG00000048740.13 CELF2 0.000000 0.000000 +608 chr10 + 11206993 11378674 ENST00000315874.4 14 8080 ENSG00000048740.13 CELF2 0.000000 0.000000 +609 chr10 + 11207103 11372602 ENST00000608830.1 14 1892 ENSG00000048740.13 CELF2 0.000000 0.000000 +610 chr10 + 11207447 11371252 ENST00000609870.1 10 1549 ENSG00000048740.13 CELF2 0.000000 0.000000 +611 chr10 + 11207447 11373240 ENST00000609692.1 12 2210 ENSG00000048740.13 CELF2 0.000000 0.000000 +612 chr10 + 11207449 11371242 ENST00000354897.3 13 1754 ENSG00000048740.13 CELF2 0.000000 0.000000 +613 chr10 + 11207491 11371055 ENST00000537122.1 11 1406 ENSG00000048740.13 CELF2 0.000000 0.000000 +614 chr10 - 11210885 11213339 ENST00000417273.1 2 430 ENSG00000230322.1 RP3-323N1.2 0.000000 0.000000 +615 chr10 - 11358797 11361847 ENST00000379256.3 2 2468 ENSG00000181800.5 CELF2-AS1 0.000000 0.000000 +616 chr10 - 11495945 11653753 ENST00000609104.1 15 11377 MSTRG.99 USP6NL 61.155746 87.881935 +617 chr10 - 11502509 11574274 ENST00000277575.5 14 4512 MSTRG.99 USP6NL 1.320096 1.897002 +618 chr10 - 11502509 11615840 ENST00000379237.2 14 4650 MSTRG.99 USP6NL 1.498269 2.153040 +619 chr10 - 11605186 11615604 ENST00000443016.1 2 2600 MSTRG.99 USP6NL 10.763751 15.467710 +620 chr10 - 11606126 11615840 ENST00000609853.1 2 1748 MSTRG.99 USP6NL 0.000000 0.000000 +621 chr10 - 11606126 11653753 ENST00000606752.1 3 1911 MSTRG.99 USP6NL 24.757301 35.576698 +622 chr10 + 11653304 11654226 ENST00000604634.1 1 923 MSTRG.100 RP11-138I18.1 0.000000 0.000000 +623 chr10 + 11721674 11722513 ENST00000604086.1 1 840 MSTRG.101 RP11-138I18.2 0.000000 0.000000 +624 chr10 + 11784365 11806069 ENST00000379215.4 5 1649 MSTRG.102 ECHDC3 34.022049 48.890312 +625 chr10 + 11784365 11806069 ENST00000496136.1 6 1767 MSTRG.102 ECHDC3 0.000000 0.000000 +626 chr10 + 11784445 11797607 ENST00000420401.1 4 881 MSTRG.102 ECHDC3 1.878405 2.699303 +627 chr10 + 11789274 11806069 ENST00000422887.1 4 1342 MSTRG.102 ECHDC3 6.010395 8.637049 +628 chr10 + 11789449 11800341 ENST00000495787.1 3 3117 MSTRG.102 ECHDC3 10.505937 15.097225 +629 chr10 + 11865338 11908782 ENST00000474155.1 4 735 MSTRG.103 PROSER2 2.511470 3.609029 +630 chr10 + 11865397 11914276 ENST00000277570.5 4 3333 MSTRG.103 PROSER2 11.168838 16.049826 +631 chr10 + 11873682 11908782 ENST00000444604.1 3 612 MSTRG.103 PROSER2 0.000000 0.000000 +632 chr10 - 11886804 11936699 MSTRG.104.1 5 7842 MSTRG.104 . 24.986204 35.905636 +633 chr10 - 11886873 11936699 MSTRG.104.2 7 8043 MSTRG.104 . 14.050419 20.190710 +634 chr10 - 11891612 11936699 ENST00000445498.1 6 3141 MSTRG.104 PROSER2-AS1 1.124037 1.615262 +635 chr10 - 11899288 11916794 ENST00000453242.1 4 475 MSTRG.104 PROSER2-AS1 0.000000 0.000000 +636 chr10 + 11911643 11914276 ENST00000379200.1 1 2634 MSTRG.103 PROSER2 0.000000 0.000000 +637 chr10 - 11962021 12077896 ENST00000356352.2 21 5569 MSTRG.105 UPF2 5.246813 7.539767 +638 chr10 - 11962021 12084833 ENST00000357604.5 22 5193 MSTRG.105 UPF2 152.733047 219.480194 +639 chr10 - 11962022 12085169 ENST00000397053.2 22 5369 MSTRG.105 UPF2 6.297889 9.050183 +640 chr10 + 11965180 11965287 ENST00000516148.1 1 108 MSTRG.106 RNU6-1095P 0.000000 0.000000 +641 chr10 - 12077058 12085169 ENST00000460569.1 2 640 MSTRG.105 UPF2 0.000000 0.000000 +642 chr10 + 12110960 12165505 MSTRG.107.1 16 5286 MSTRG.107 . 7.618798 10.948353 +643 chr10 + 12110971 12165505 ENST00000263035.4 17 5440 MSTRG.107 DHTKD1 63.414665 91.128044 +644 chr10 + 12111023 12133683 ENST00000437298.1 5 974 MSTRG.107 DHTKD1 0.000000 0.000000 +645 chr10 + 12123523 12139995 ENST00000465617.1 4 811 MSTRG.107 DHTKD1 0.000000 0.000000 +646 chr10 + 12131174 12136300 ENST00000415935.1 3 482 MSTRG.107 DHTKD1 0.000000 0.000000 +647 chr10 + 12136259 12155063 ENST00000448829.1 6 822 MSTRG.107 DHTKD1 0.000000 0.000000 +648 chr10 - 12158279 12158378 ENST00000606801.1 1 100 MSTRG.108 U6 0.000000 0.000000 +649 chr10 + 12160778 12162358 ENST00000479283.1 2 318 MSTRG.107 DHTKD1 0.000000 0.000000 +650 chr10 + 12171636 12197404 ENST00000379051.1 7 708 MSTRG.109 SEC61A2 1.904549 2.736872 +651 chr10 + 12171636 12207411 MSTRG.109.1 12 2481 MSTRG.109 . 18.115547 26.032375 +652 chr10 + 12171640 12207411 ENST00000379033.3 11 2470 MSTRG.109 SEC61A2 13.632996 19.590866 +653 chr10 + 12171664 12207411 MSTRG.109.4 11 2358 MSTRG.109 . 17.818815 25.605965 +654 chr10 + 12171665 12200104 ENST00000441368.1 7 833 MSTRG.109 SEC61A2 0.000000 0.000000 +655 chr10 + 12171693 12211960 ENST00000475268.1 13 2183 MSTRG.109 SEC61A2 1.530889 2.199916 +656 chr10 + 12171698 12207411 ENST00000298428.9 12 2478 MSTRG.109 SEC61A2 21.752726 31.259068 +657 chr10 + 12171698 12211960 ENST00000495368.1 14 2311 MSTRG.109 SEC61A2 1.730560 2.486847 +658 chr10 + 12171700 12211960 ENST00000304267.8 12 2035 MSTRG.109 SEC61A2 3.034806 4.361072 +659 chr10 + 12171701 12200104 ENST00000472221.1 8 907 MSTRG.109 SEC61A2 5.597755 8.044077 +660 chr10 + 12171726 12207411 ENST00000379020.4 11 2252 MSTRG.109 SEC61A2 0.000000 0.000000 +661 chr10 + 12171732 12197309 ENST00000379017.3 7 2090 MSTRG.109 SEC61A2 26.731482 38.413631 +662 chr10 - 12172759 12172815 ENST00000584402.1 1 57 MSTRG.110 MIR548AK 0.000000 0.000000 +663 chr10 + 12178108 12191766 ENST00000457034.1 3 314 MSTRG.109 SEC61A2 0.000000 0.000000 +664 chr10 + 12185139 12200104 ENST00000418772.1 4 496 MSTRG.109 SEC61A2 0.000000 0.000000 +665 chr10 + 12187662 12187765 ENST00000458754.1 1 104 MSTRG.111 snoU13 0.000000 0.000000 +666 chr10 + 12191855 12207411 ENST00000419021.1 5 1643 MSTRG.109 SEC61A2 0.000000 0.000000 +667 chr10 + 12199018 12200284 ENST00000466451.1 2 427 MSTRG.109 SEC61A2 1.523939 2.189929 +668 chr10 - 12207324 12238143 ENST00000491614.1 10 3453 MSTRG.112 NUDT5 208.940994 300.252045 +669 chr10 - 12209575 12238143 ENST00000378937.3 11 1241 MSTRG.112 NUDT5 43.145405 62.000740 +670 chr10 - 12209576 12238143 ENST00000537776.1 10 1201 MSTRG.112 NUDT5 3.679850 5.288013 +671 chr10 - 12209671 12238143 ENST00000378952.3 11 1201 MSTRG.112 NUDT5 44.202209 63.519390 +672 chr10 - 12209737 12221131 ENST00000476462.1 6 622 MSTRG.112 NUDT5 5.053801 7.262405 +673 chr10 - 12211721 12238143 ENST00000378940.3 10 1401 MSTRG.112 NUDT5 9.450526 13.580582 +674 chr10 - 12212231 12238143 ENST00000378927.3 8 1580 MSTRG.112 NUDT5 27.038656 38.855049 +675 chr10 - 12214489 12215812 ENST00000498825.1 2 473 MSTRG.112 NUDT5 7.960904 11.439966 +676 chr10 - 12219842 12238143 ENST00000444732.1 5 709 MSTRG.112 NUDT5 0.000000 0.000000 +677 chr10 + 12237964 12272995 ENST00000429258.2 8 664 MSTRG.113 CDC123 5.176055 7.438086 +678 chr10 + 12237965 12292588 ENST00000281141.4 13 1543 MSTRG.113 CDC123 635.676208 913.478394 +679 chr10 + 12238129 12291717 ENST00000455773.3 11 971 MSTRG.113 CDC123 112.744301 162.015640 +680 chr10 + 12238195 12240875 ENST00000467016.1 2 296 MSTRG.113 CDC123 0.000000 0.000000 +681 chr10 + 12238222 12292588 ENST00000378900.2 12 1163 MSTRG.113 CDC123 34.105793 49.010654 +682 chr10 + 12238231 12279265 ENST00000442050.1 8 606 MSTRG.113 CDC123 166.450439 239.192368 +683 chr10 + 12238231 12292588 MSTRG.113.6 11 1052 MSTRG.113 . 5.107059 7.338938 +684 chr10 + 12259413 12292588 ENST00000498747.1 9 950 MSTRG.113 CDC123 0.000000 0.000000 +685 chr10 + 12272947 12292588 ENST00000440613.1 6 685 MSTRG.113 CDC123 1.704881 2.449945 +686 chr10 - 12286750 12289107 ENST00000598961.1 2 1827 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +687 chr10 - 12287627 12289844 ENST00000421657.1 2 1914 MSTRG.114 RP11-186N15.3 0.000000 0.000000 +688 chr10 + 12288053 12292588 ENST00000497963.1 2 1233 MSTRG.113 CDC123 14.110341 20.276821 +689 chr10 + 12303670 12303926 ENST00000582360.1 1 257 ENSG00000265824.1 RN7SL232P 0.000000 0.000000 +690 chr10 - 12370135 12370388 ENST00000583190.1 1 254 ENSG00000264036.1 RN7SL198P 0.000000 0.000000 +691 chr10 + 12391481 12877545 ENST00000378847.3 11 8154 MSTRG.115 CAMK1D 24.814671 35.659138 +692 chr10 + 12391481 12877545 MSTRG.115.1 12 8134 MSTRG.115 . 23.228512 33.379799 +693 chr10 + 12391651 12708948 ENST00000487696.1 2 473 MSTRG.115 CAMK1D 0.000000 0.000000 +694 chr10 + 12391732 12869446 ENST00000378845.1 10 2882 MSTRG.115 CAMK1D 11.525928 16.562971 +695 chr10 + 12391732 12877545 MSTRG.115.4 11 7907 MSTRG.115 . 2.021776 2.905329 +696 chr10 + 12391758 12823236 MSTRG.115.7 6 1421 MSTRG.115 . 2.276348 3.271154 +697 chr10 + 12391758 12877545 MSTRG.115.6 12 7853 MSTRG.115 . 36.435478 52.358452 +698 chr10 + 12457927 12457999 ENST00000516629.1 1 73 MSTRG.116 SNORD45 0.000000 0.000000 +699 chr10 + 12498482 12498630 ENST00000516309.1 1 149 MSTRG.117 RNU6ATAC39P 0.000000 0.000000 +700 chr10 + 12580266 12869446 MSTRG.115.8 10 2774 MSTRG.115 . 0.000000 0.000000 +701 chr10 + 12620752 12620822 ENST00000582492.1 1 71 MSTRG.118 MIR4480 0.000000 0.000000 +702 chr10 - 12767253 12767352 ENST00000408404.1 1 100 MSTRG.119 MIR548Q 0.000000 0.000000 +703 chr10 - 12938627 13043697 ENST00000378825.3 3 2729 MSTRG.120 CCDC3 32.748447 47.060123 +704 chr10 - 12938627 13141811 ENST00000378839.1 7 3339 MSTRG.120 CCDC3 1.533051 2.203022 +705 chr10 - 12966679 12966785 ENST00000391197.1 1 107 MSTRG.121 RNA5SP300 0.000000 0.000000 +706 chr10 - 13099902 13100676 ENST00000441148.1 1 775 MSTRG.122 RPL5P25 1.527742 2.195394 +707 chr10 - 13103634 13141811 MSTRG.120.3 4 895 MSTRG.120 . 1.659034 2.384063 +708 chr10 - 13140536 13141811 MSTRG.120.4 3 511 MSTRG.120 . 0.000000 0.000000 +709 chr10 + 13141449 13180375 ENST00000263036.5 15 3916 MSTRG.123 OPTN 0.000000 0.000000 +710 chr10 + 13141603 13180375 ENST00000378764.2 15 3744 MSTRG.123 OPTN 0.000000 0.000000 +711 chr10 + 13142069 13180375 MSTRG.123.3 15 3622 MSTRG.123 . 119.505943 171.732239 +712 chr10 + 13142070 13180375 MSTRG.123.4 14 3469 MSTRG.123 . 133.930695 192.460876 +713 chr10 + 13142070 13180375 MSTRG.123.5 16 3693 MSTRG.123 . 94.217834 135.392761 +714 chr10 + 13142159 13151662 ENST00000487935.1 3 511 MSTRG.123 OPTN 0.000000 0.000000 +715 chr10 + 13142163 13161040 ENST00000482140.1 5 727 MSTRG.123 OPTN 1.404286 2.017985 +716 chr10 + 13142169 13180375 ENST00000378757.2 14 3388 MSTRG.123 OPTN 103.126602 148.194839 +717 chr10 + 13142173 13158340 ENST00000430081.1 5 861 MSTRG.123 OPTN 14.752191 21.199169 +718 chr10 + 13142173 13180375 ENST00000378748.3 16 3605 MSTRG.123 OPTN 97.045387 139.456009 +719 chr10 + 13142173 13180375 ENST00000378752.3 16 3572 MSTRG.123 OPTN 117.861420 169.369034 +720 chr10 + 13142225 13180375 ENST00000378747.3 15 3484 MSTRG.123 OPTN 24.474239 35.169933 +721 chr10 - 13146574 13146793 ENST00000456003.1 1 220 MSTRG.124 SNRPGP5 2.300035 3.305193 +722 chr10 + 13154487 13158540 ENST00000486862.1 2 423 MSTRG.123 OPTN 8.748809 12.572200 +723 chr10 + 13158268 13165198 ENST00000424614.1 4 664 MSTRG.123 OPTN 37.813496 54.338688 +724 chr10 + 13173319 13180375 ENST00000469025.1 4 2099 MSTRG.123 OPTN 0.000000 0.000000 +725 chr10 - 13181196 13181533 ENST00000442321.1 1 338 ENSG00000234175.1 RP11-730A19.9 0.000000 0.000000 +726 chr10 - 13184185 13184977 ENST00000442900.1 1 793 ENSG00000228330.1 RP11-730A19.5 0.000000 0.000000 +727 chr10 - 13198684 13200136 ENST00000447253.1 1 1453 ENSG00000203414.2 BTBD7P1 0.000000 0.000000 +728 chr10 + 13200491 13201463 MSTRG.125.1 1 973 MSTRG.125 . 7.118191 10.228971 +729 chr10 - 13201477 13201777 ENST00000418616.1 1 301 MSTRG.126 RP11-730A19.7 0.000000 0.000000 +730 chr10 + 13203554 13253104 ENST00000378714.3 20 4547 MSTRG.127 MCM10 12.965645 18.631872 +731 chr10 + 13203579 13214480 ENST00000479669.1 3 475 MSTRG.127 MCM10 0.000000 0.000000 +732 chr10 + 13203579 13253104 ENST00000484800.2 20 4525 MSTRG.127 MCM10 21.526468 30.933933 +733 chr10 + 13206128 13253104 ENST00000378694.1 18 4587 MSTRG.127 MCM10 0.000000 0.000000 +734 chr10 + 13234491 13237580 ENST00000459751.1 2 618 MSTRG.127 MCM10 0.000000 0.000000 +735 chr10 + 13237086 13243872 ENST00000481292.1 4 900 MSTRG.127 MCM10 0.000000 0.000000 +736 chr10 + 13240763 13246526 ENST00000485659.1 3 467 MSTRG.127 MCM10 0.000000 0.000000 +737 chr10 + 13259269 13259375 ENST00000606623.1 1 107 MSTRG.128 RNU6-6P 127.182243 182.763229 +738 chr10 - 13263767 13276331 ENST00000378681.3 5 826 ENSG00000165623.5 UCMA 0.000000 0.000000 +739 chr10 - 13263767 13276334 ENST00000463405.2 4 763 ENSG00000165623.5 UCMA 0.000000 0.000000 +740 chr10 - 13319796 13341763 ENST00000396913.2 8 1732 MSTRG.129 PHYH 0.000000 0.000000 +741 chr10 - 13319800 13342101 ENST00000263038.4 9 1577 MSTRG.129 PHYH 126.017410 181.089340 +742 chr10 - 13319843 13344412 ENST00000396920.3 9 1829 MSTRG.129 PHYH 1.843858 2.649658 +743 chr10 - 13325690 13341763 ENST00000453759.2 7 1097 MSTRG.129 PHYH 0.000000 0.000000 +744 chr10 - 13330412 13342101 ENST00000479604.1 6 691 MSTRG.129 PHYH 0.000000 0.000000 +745 chr10 - 13333461 13336987 ENST00000464049.1 2 1012 MSTRG.129 PHYH 2.425783 3.485895 +746 chr10 - 13337228 13342101 ENST00000463730.1 3 572 MSTRG.129 PHYH 1.016622 1.460904 +747 chr10 - 13350145 13350447 ENST00000429930.1 1 303 ENSG00000226209.1 AL138764.1 0.000000 0.000000 +748 chr10 - 13359424 13389358 MSTRG.130.1 9 3057 MSTRG.130 . 232.933945 334.730377 +749 chr10 - 13359424 13390297 ENST00000327347.5 9 3273 MSTRG.130 SEPHS1 201.822830 290.023132 +750 chr10 - 13360080 13390297 ENST00000378614.4 8 2404 MSTRG.130 SEPHS1 9.064010 13.025149 +751 chr10 - 13360083 13390297 ENST00000545675.1 10 2706 MSTRG.130 SEPHS1 6.556041 9.421151 +752 chr10 - 13360590 13390297 ENST00000537130.1 8 1836 MSTRG.130 SEPHS1 4.960994 7.129040 +753 chr10 - 13375877 13389358 ENST00000413411.1 5 660 MSTRG.130 SEPHS1 0.000000 0.000000 +754 chr10 - 13375901 13382790 ENST00000425947.1 4 383 MSTRG.130 SEPHS1 3.170536 4.556118 +755 chr10 - 13380716 13387460 ENST00000494329.1 2 796 MSTRG.130 SEPHS1 22.216700 31.925808 +756 chr10 + 13390362 13390978 MSTRG.131.1 1 617 MSTRG.131 . 0.000000 0.000000 +757 chr10 + 13457202 13465133 ENST00000448272.1 2 454 ENSG00000233256.1 RP11-445K13.2 0.000000 0.000000 +758 chr10 - 13480484 13502083 ENST00000486542.1 4 1764 MSTRG.132 BEND7 0.000000 0.000000 +759 chr10 - 13480501 13570974 ENST00000396900.2 9 2672 MSTRG.132 BEND7 0.000000 0.000000 +760 chr10 - 13480637 13544976 ENST00000341083.3 9 2239 MSTRG.132 BEND7 0.000000 0.000000 +761 chr10 - 13483084 13570974 MSTRG.132.4 9 4034 MSTRG.132 . 15.804643 22.711563 +762 chr10 - 13483084 13570974 MSTRG.132.5 9 7172 MSTRG.132 . 3.121023 4.484968 +763 chr10 - 13483084 13570974 MSTRG.132.6 8 7895 MSTRG.132 . 5.117447 7.353865 +764 chr10 - 13483084 13570974 MSTRG.132.7 9 4335 MSTRG.132 . 2.231503 3.206711 +765 chr10 - 13483087 13570974 MSTRG.132.10 6 7401 MSTRG.132 . 0.000000 0.000000 +766 chr10 - 13483087 13570974 MSTRG.132.11 9 7133 MSTRG.132 . 3.085053 4.433278 +767 chr10 - 13483087 13570974 MSTRG.132.12 10 4091 MSTRG.132 . 2.641408 3.795752 +768 chr10 - 13483087 13570974 MSTRG.132.13 10 4049 MSTRG.132 . 2.314456 3.325916 +769 chr10 - 13483087 13570974 MSTRG.132.8 9 4034 MSTRG.132 . 9.057226 13.015401 +770 chr10 - 13483087 13570974 MSTRG.132.9 8 7853 MSTRG.132 . 2.892105 4.156009 +771 chr10 - 13483088 13523120 ENST00000440282.1 3 6571 MSTRG.132 BEND7 19.765318 28.403126 +772 chr10 - 13483088 13570974 MSTRG.132.14 9 4334 MSTRG.132 . 2.728639 3.921104 +773 chr10 - 13483090 13570974 ENST00000396898.2 9 2375 MSTRG.132 BEND7 1.499334 2.154571 +774 chr10 - 13483113 13570974 MSTRG.132.17 9 2156 MSTRG.132 . 0.000000 0.000000 +775 chr10 - 13483113 13570974 MSTRG.132.18 9 7146 MSTRG.132 . 3.830903 5.505078 +776 chr10 - 13483113 13570974 MSTRG.132.19 7 5631 MSTRG.132 . 1.027044 1.475881 +777 chr10 - 13483114 13570974 MSTRG.132.20 9 2116 MSTRG.132 . 0.000000 0.000000 +778 chr10 - 13483355 13544976 ENST00000378605.3 8 1640 MSTRG.132 BEND7 0.000000 0.000000 +779 chr10 - 13483355 13570974 MSTRG.132.21 10 3820 MSTRG.132 . 2.282263 3.279654 +780 chr10 - 13483399 13570974 MSTRG.132.23 9 6818 MSTRG.132 . 2.696880 3.875467 +781 chr10 - 13484980 13494658 ENST00000480703.1 3 598 MSTRG.132 BEND7 9.532551 13.698452 +782 chr10 - 13484980 13570974 MSTRG.132.24 10 4355 MSTRG.132 . 1.377947 1.980135 +783 chr10 - 13484980 13570974 MSTRG.132.25 9 2400 MSTRG.132 . 0.000000 0.000000 +784 chr10 - 13487290 13494658 ENST00000463303.1 3 442 MSTRG.132 BEND7 0.000000 0.000000 +785 chr10 - 13487316 13523120 ENST00000469555.1 5 695 MSTRG.132 BEND7 0.000000 0.000000 +786 chr10 - 13534692 13538929 ENST00000492675.1 2 349 MSTRG.132 BEND7 0.000000 0.000000 +787 chr10 - 13534692 13570974 MSTRG.132.29 5 1226 MSTRG.132 . 0.000000 0.000000 +788 chr10 - 13538788 13570974 ENST00000466271.1 4 990 MSTRG.132 BEND7 0.000000 0.000000 +789 chr10 - 13553206 13553313 ENST00000365638.1 1 108 MSTRG.133 Y_RNA 0.000000 0.000000 +790 chr10 + 13570516 13572262 ENST00000438431.1 2 380 MSTRG.134 RP11-214D15.2 0.000000 0.000000 +791 chr10 + 13628927 13673142 ENST00000378572.3 10 1991 MSTRG.135 PRPF18 30.657368 44.055202 +792 chr10 + 13628927 13697929 MSTRG.135.1 15 12325 MSTRG.135 . 46.297443 66.530281 +793 chr10 + 13628939 13656086 ENST00000417658.1 10 1088 MSTRG.135 PRPF18 2.637571 3.790238 +794 chr10 + 13628968 13653683 ENST00000320054.4 7 819 MSTRG.135 PRPF18 6.530677 9.384703 +795 chr10 + 13628968 13697929 MSTRG.135.4 15 10144 MSTRG.135 . 0.000000 0.000000 +796 chr10 - 13633460 13634323 ENST00000445338.1 1 864 MSTRG.136 RP11-295P9.2 1.390715 1.998483 +797 chr10 + 13652047 13697929 ENST00000601460.1 7 1204 MSTRG.135 RP11-295P9.3 1.683526 2.419258 +798 chr10 + 13658531 13687074 ENST00000595538.1 5 734 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +799 chr10 + 13672284 13687074 ENST00000596044.1 5 824 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +800 chr10 + 13673143 13687074 ENST00000601075.1 4 923 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +801 chr10 + 13673288 13697929 ENST00000597920.1 4 1893 MSTRG.135 RP11-295P9.3 1.419107 2.039283 +802 chr10 + 13673333 13690230 ENST00000440878.1 3 397 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +803 chr10 + 13673722 13696427 ENST00000601758.1 5 744 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +804 chr10 + 13673768 13697929 ENST00000599639.1 4 1099 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +805 chr10 + 13674680 13697929 ENST00000596499.1 6 1159 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +806 chr10 + 13678997 13687074 ENST00000599378.1 4 603 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +807 chr10 + 13680646 13686563 ENST00000610032.1 1 5918 MSTRG.135 RP11-295P9.3 9.882881 14.201882 +808 chr10 + 13680825 13688669 ENST00000437446.1 2 1852 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +809 chr10 + 13685644 13695446 ENST00000600249.1 6 773 MSTRG.135 RP11-295P9.3 1.224269 1.759297 +810 chr10 - 13685706 13900912 ENST00000358621.4 23 6407 MSTRG.137 FRMD4A 5.822341 8.366812 +811 chr10 - 13685706 13933775 MSTRG.137.2 24 6559 MSTRG.137 . 74.829857 107.531883 +812 chr10 - 13685706 14050897 MSTRG.137.1 23 7174 MSTRG.137 . 217.385101 312.386414 +813 chr10 - 13685712 14372883 ENST00000357447.2 25 6815 MSTRG.137 FRMD4A 0.000000 0.000000 +814 chr10 + 13686576 13690773 ENST00000600501.1 3 793 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +815 chr10 + 13686791 13697929 ENST00000596235.1 6 1237 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +816 chr10 - 13688056 14050897 MSTRG.137.5 24 4860 MSTRG.137 . 67.479538 96.969345 +817 chr10 - 13688272 13696526 ENST00000475325.1 2 875 MSTRG.137 FRMD4A 4.571859 6.569846 +818 chr10 - 13688334 13699173 ENST00000495956.1 3 1337 MSTRG.137 FRMD4A 0.000000 0.000000 +819 chr10 + 13688670 13697929 ENST00000419851.2 4 1380 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +820 chr10 + 13688844 13697929 ENST00000594575.1 5 1355 MSTRG.135 RP11-295P9.3 0.000000 0.000000 +821 chr10 + 13690184 13710595 ENST00000593351.1 3 1120 MSTRG.135 RP11-295P9.3 1.288636 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- 13699174 13933775 MSTRG.137.10 22 2558 MSTRG.137 . 2.734294 3.929231 +834 chr10 - 13699174 14014369 MSTRG.137.16 21 3033 MSTRG.137 . 3.210712 4.613853 +835 chr10 - 13699174 14050897 MSTRG.137.12 23 3789 MSTRG.137 . 82.788910 118.969193 +836 chr10 - 13708224 14014369 ENST00000264546.6 17 2145 MSTRG.137 FRMD4A 1.427998 2.052059 +837 chr10 + 13717646 13717990 ENST00000609756.1 1 345 MSTRG.138 RP11-295P9.12 0.000000 0.000000 +838 chr10 + 13724521 13726874 ENST00000600850.1 2 1978 MSTRG.139 RP11-295P9.8 1.196819 1.719851 +839 chr10 - 13734169 13750043 ENST00000492155.1 3 3017 MSTRG.137 FRMD4A 19.709417 28.322796 +840 chr10 - 13735703 14050897 ENST00000342409.2 14 2106 MSTRG.137 FRMD4A 0.000000 0.000000 +841 chr10 - 13735983 13750043 ENST00000477221.1 4 971 MSTRG.137 FRMD4A 0.000000 0.000000 +842 chr10 + 13746978 13747072 ENST00000410303.1 1 95 MSTRG.140 AL157392.1 0.000000 0.000000 +843 chr10 + 13752415 13754054 ENST00000412388.1 2 373 MSTRG.141 RP11-295P9.6 0.000000 0.000000 +844 chr10 + 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14560556 14646417 MSTRG.152.4 5 3338 MSTRG.152 . 17.131458 24.618221 +868 chr10 - 14560556 14646417 MSTRG.152.5 6 5580 MSTRG.152 . 56.743919 81.542061 +869 chr10 - 14560559 14816896 ENST00000181796.2 5 3785 MSTRG.152 FAM107B 0.000000 0.000000 +870 chr10 - 14561158 14646417 ENST00000468747.1 4 2662 MSTRG.152 FAM107B 20.652269 29.677692 +871 chr10 - 14561512 14646417 ENST00000378467.4 5 2374 MSTRG.152 FAM107B 2.802040 4.026583 +872 chr10 - 14561901 14816896 ENST00000487335.1 6 2509 MSTRG.152 FAM107B 0.000000 0.000000 +873 chr10 - 14562794 14614188 ENST00000378465.3 4 1113 MSTRG.152 FAM107B 0.000000 0.000000 +874 chr10 - 14562850 14614188 ENST00000378458.2 5 1284 MSTRG.152 FAM107B 0.000000 0.000000 +875 chr10 - 14563016 14598360 ENST00000478076.1 4 971 MSTRG.152 FAM107B 0.000000 0.000000 +876 chr10 - 14563072 14614188 ENST00000378462.1 4 768 MSTRG.152 FAM107B 0.000000 0.000000 +877 chr10 - 14563088 14590669 ENST00000481209.1 5 887 MSTRG.152 FAM107B 0.000000 0.000000 +878 chr10 - 14563095 14564224 ENST00000475858.1 2 568 MSTRG.152 FAM107B 0.000000 0.000000 +879 chr10 - 14563136 14596228 ENST00000496330.1 5 697 MSTRG.152 FAM107B 0.000000 0.000000 +880 chr10 - 14563136 14598413 ENST00000492700.1 4 558 MSTRG.152 FAM107B 0.000000 0.000000 +881 chr10 - 14563157 14614338 ENST00000479731.1 4 595 MSTRG.152 FAM107B 0.000000 0.000000 +882 chr10 - 14563193 14614338 ENST00000468492.1 5 625 MSTRG.152 FAM107B 0.000000 0.000000 +883 chr10 - 14563200 14614188 ENST00000452706.2 4 868 MSTRG.152 FAM107B 0.000000 0.000000 +884 chr10 - 14563206 14574709 ENST00000489100.1 4 559 MSTRG.152 FAM107B 0.000000 0.000000 +885 chr10 - 14563211 14598014 ENST00000494865.1 5 691 MSTRG.152 FAM107B 0.000000 0.000000 +886 chr10 - 14563280 14598360 ENST00000475786.1 5 773 MSTRG.152 FAM107B 0.000000 0.000000 +887 chr10 - 14563868 14614188 ENST00000488576.1 5 711 MSTRG.152 FAM107B 0.000000 0.000000 +888 chr10 - 14563869 14595482 ENST00000474143.1 3 496 MSTRG.152 FAM107B 0.000000 0.000000 +889 chr10 - 14563875 14654551 ENST00000442012.1 4 458 MSTRG.152 FAM107B 0.000000 0.000000 +890 chr10 - 14563893 14614188 ENST00000482277.1 4 642 MSTRG.152 FAM107B 0.000000 0.000000 +891 chr10 - 14563944 14614188 ENST00000472095.1 5 632 MSTRG.152 FAM107B 0.000000 0.000000 +892 chr10 - 14571527 14646417 ENST00000471815.1 3 1022 MSTRG.152 FAM107B 0.000000 0.000000 +893 chr10 - 14571954 14614188 ENST00000464952.1 4 748 MSTRG.152 FAM107B 0.000000 0.000000 +894 chr10 - 14576785 14614188 ENST00000495292.1 3 576 MSTRG.152 FAM107B 0.000000 0.000000 +895 chr10 - 14644456 14646417 ENST00000491458.1 2 573 MSTRG.152 FAM107B 2.963521 4.258635 +896 chr10 + 14694741 14703690 ENST00000443282.1 3 357 MSTRG.153 RP11-7C6.1 0.000000 0.000000 +897 chr10 - 14705394 14705493 ENST00000364896.1 1 100 MSTRG.154 RNA5SP302 0.000000 0.000000 +898 chr10 - 14765170 14766054 ENST00000456871.1 1 885 MSTRG.155 RP11-398C13.2 0.000000 0.000000 +899 chr10 - 14860113 14880071 MSTRG.156.1 5 2600 MSTRG.156 . 5.849361 8.405640 +900 chr10 - 14860273 14880071 MSTRG.156.2 6 2561 MSTRG.156 . 4.699152 6.752768 +901 chr10 - 14860304 14880071 MSTRG.156.3 6 2526 MSTRG.156 . 0.000000 0.000000 +902 chr10 - 14861249 14880574 ENST00000378442.1 6 1492 MSTRG.156 CDNF 0.000000 0.000000 +903 chr10 - 14861530 14880071 ENST00000378441.2 4 1041 MSTRG.156 CDNF 0.000000 0.000000 +904 chr10 - 14861884 14870271 ENST00000467405.1 3 529 MSTRG.156 CDNF 0.000000 0.000000 +905 chr10 - 14861887 14878293 ENST00000466269.1 4 585 MSTRG.156 CDNF 0.000000 0.000000 +906 chr10 - 14861979 14880071 ENST00000465530.1 4 690 MSTRG.156 CDNF 0.000000 0.000000 +907 chr10 + 14880163 14913740 ENST00000378372.3 14 1904 MSTRG.157 HSPA14 195.113235 280.381317 +908 chr10 + 14880228 14884845 ENST00000493863.1 4 1108 MSTRG.157 HSPA14 1.292670 1.857591 +909 chr10 + 14880228 14888988 MSTRG.157.2 5 4727 MSTRG.157 . 71.944847 103.386070 +910 chr10 + 14880301 14888988 ENST00000437161.2 4 3941 MSTRG.157 HSPA14 12.006199 17.253130 +911 chr10 + 14880330 14884845 ENST00000493178.1 5 1105 MSTRG.157 HSPA14 1.382211 1.986263 +912 chr10 + 14880436 14891719 ENST00000441647.1 6 630 MSTRG.157 HSPA14 6.715128 9.649762 +913 chr10 + 14892714 14896279 ENST00000470430.1 3 927 MSTRG.157 HSPA14 8.882087 12.763722 +914 chr10 - 14919687 14920685 ENST00000609399.1 1 999 MSTRG.158 RP11-398C13.6 8.754759 12.580750 +915 chr10 + 14920819 14954823 ENST00000378331.5 5 11468 MSTRG.159 SUV39H2 1.877247 2.697639 +916 chr10 + 14920819 14955409 MSTRG.159.1 6 11880 MSTRG.159 . 4.437751 6.377130 +917 chr10 + 14920847 14954823 ENST00000433779.1 6 11087 MSTRG.159 SUV39H2 0.000000 0.000000 +918 chr10 + 14920862 14954823 ENST00000378325.3 6 11031 MSTRG.159 SUV39H2 2.664993 3.829644 +919 chr10 + 14920888 14954823 ENST00000354919.6 6 11545 MSTRG.159 SUV39H2 3.645616 5.238818 +920 chr10 + 14920888 14954823 MSTRG.159.6 6 11586 MSTRG.159 . 0.000000 0.000000 +921 chr10 + 14920888 14955409 MSTRG.159.5 7 11957 MSTRG.159 . 5.115722 7.351387 +922 chr10 + 14920899 14954823 ENST00000313519.5 5 11596 MSTRG.159 SUV39H2 1.279445 1.838586 +923 chr10 + 14920921 14939516 ENST00000420416.1 2 711 MSTRG.159 SUV39H2 0.000000 0.000000 +924 chr10 + 14921123 14954823 MSTRG.159.10 6 11891 MSTRG.159 . 0.000000 0.000000 +925 chr10 + 14921815 14939516 ENST00000412254.1 3 1070 MSTRG.159 SUV39H2 0.000000 0.000000 +926 chr10 + 14923499 14954823 ENST00000358298.6 4 10842 MSTRG.159 SUV39H2 0.000000 0.000000 +927 chr10 - 14939358 14996431 ENST00000378289.4 14 3532 MSTRG.160 DCLRE1C 8.200402 11.784129 +928 chr10 - 14948897 14996431 ENST00000453695.2 14 4011 MSTRG.160 DCLRE1C 22.728359 32.661072 +929 chr10 - 14949878 14996431 ENST00000378246.2 13 2974 MSTRG.160 DCLRE1C 1.036439 1.489382 +930 chr10 - 14950165 14996431 ENST00000357717.2 12 2602 MSTRG.160 DCLRE1C 0.000000 0.000000 +931 chr10 - 14950170 14996431 ENST00000378249.1 12 2630 MSTRG.160 DCLRE1C 0.000000 0.000000 +932 chr10 - 14950170 14996431 ENST00000378254.1 15 2869 MSTRG.160 DCLRE1C 0.000000 0.000000 +933 chr10 - 14950170 14996431 ENST00000378255.1 16 3191 MSTRG.160 DCLRE1C 0.000000 0.000000 +934 chr10 - 14950170 14996431 ENST00000378258.1 15 2823 MSTRG.160 DCLRE1C 0.000000 0.000000 +935 chr10 - 14950170 14996431 ENST00000378278.2 14 2738 MSTRG.160 DCLRE1C 0.000000 0.000000 +936 chr10 - 14950170 14996431 ENST00000396817.2 16 3145 MSTRG.160 DCLRE1C 0.000000 0.000000 +937 chr10 - 14950187 14965674 ENST00000378242.1 3 1933 MSTRG.160 DCLRE1C 0.000000 0.000000 +938 chr10 - 14950187 14996431 MSTRG.160.11 16 2937 MSTRG.160 . 0.000000 0.000000 +939 chr10 - 14950741 14970141 ENST00000492201.1 6 1020 MSTRG.160 DCLRE1C 0.000000 0.000000 +940 chr10 - 14950741 14996431 MSTRG.160.13 15 2307 MSTRG.160 . 1.601732 2.301718 +941 chr10 - 14951169 14953321 ENST00000489845.1 2 294 MSTRG.160 DCLRE1C 0.000000 0.000000 +942 chr10 - 14951169 15059043 MSTRG.160.15 7 780 MSTRG.160 . 0.000000 0.000000 +943 chr10 - 14961795 14970141 ENST00000489161.1 3 253 MSTRG.160 DCLRE1C 0.000000 0.000000 +944 chr10 - 14961795 14996431 MSTRG.160.17 13 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OR7E26P 0.000000 0.000000 +956 chr10 - 15049860 15050883 ENST00000382617.4 1 1024 MSTRG.164 OR7E115P 0.000000 0.000000 +957 chr10 - 15057071 15130775 ENST00000378211.3 8 997 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +958 chr10 - 15057369 15063862 ENST00000454630.1 5 470 MSTRG.160 DCLRE1CP1 0.000000 0.000000 +959 chr10 + 15074226 15107752 ENST00000428897.1 6 859 MSTRG.165 OLAH 0.000000 0.000000 +960 chr10 + 15074252 15098981 ENST00000413672.1 4 583 MSTRG.165 OLAH 0.000000 0.000000 +961 chr10 + 15080621 15107752 ENST00000429028.1 6 797 MSTRG.165 OLAH 0.000000 0.000000 +962 chr10 + 15085895 15115851 ENST00000378228.3 8 1675 MSTRG.165 OLAH 0.000000 0.000000 +963 chr10 + 15085926 15104083 ENST00000378225.1 4 810 MSTRG.165 OLAH 0.000000 0.000000 +964 chr10 + 15085962 15115851 ENST00000378217.3 9 1767 MSTRG.165 OLAH 1.908901 2.743126 +965 chr10 + 15091722 15110069 ENST00000493912.1 5 491 MSTRG.165 OLAH 0.000000 0.000000 +966 chr10 + 15107537 15115851 ENST00000485251.1 2 982 MSTRG.165 OLAH 0.000000 0.000000 +967 chr10 - 15119522 15130775 ENST00000356189.5 4 1322 MSTRG.160 ACBD7 14.961424 21.499844 +968 chr10 - 15120486 15130715 ENST00000496890.1 4 709 MSTRG.160 ACBD7 0.000000 0.000000 +969 chr10 - 15135262 15135610 ENST00000452090.1 1 349 ENSG00000228312.1 GAPDHP45 0.000000 0.000000 +970 chr10 - 15137384 15139318 ENST00000378207.3 2 1714 MSTRG.166 C10orf111 0.000000 0.000000 +971 chr10 + 15139179 15146256 ENST00000378203.1 3 1302 MSTRG.167 RPP38 35.629208 51.199829 +972 chr10 + 15139214 15148129 ENST00000378201.2 5 833 MSTRG.167 RPP38 0.000000 0.000000 +973 chr10 + 15139236 15181817 ENST00000451677.1 3 323 MSTRG.167 RPP38 0.000000 0.000000 +974 chr10 + 15139330 15146256 ENST00000378202.5 2 1032 MSTRG.167 RPP38 63.190937 90.806541 +975 chr10 + 15139381 15146256 ENST00000378197.4 3 1457 MSTRG.167 RPP38 62.790943 90.231743 +976 chr10 + 15139419 15146256 ENST00000441850.1 2 1300 MSTRG.167 RPP38 22.428183 32.229713 +977 chr10 - 15144583 15151838 ENST00000466201.1 2 1238 MSTRG.168 NMT2 4.205623 6.043558 +978 chr10 - 15147758 15210692 MSTRG.168.2 12 2497 MSTRG.168 . 19.053061 27.379599 +979 chr10 - 15147758 15210692 MSTRG.168.3 13 2540 MSTRG.168 . 18.821527 27.046883 +980 chr10 - 15148372 15161512 ENST00000486786.1 4 803 MSTRG.168 NMT2 0.000000 0.000000 +981 chr10 - 15149865 15210692 ENST00000378165.4 12 2907 MSTRG.168 NMT2 40.344460 57.975735 +982 chr10 - 15150293 15210692 ENST00000378150.1 13 2522 MSTRG.168 NMT2 74.348709 106.840462 +983 chr10 - 15151020 15202124 ENST00000540259.1 12 1832 MSTRG.168 NMT2 0.000000 0.000000 +984 chr10 - 15151098 15210501 ENST00000535341.1 13 1669 MSTRG.168 NMT2 6.855125 9.850941 +985 chr10 - 15174816 15183352 ENST00000478580.1 5 840 MSTRG.168 NMT2 0.000000 0.000000 +986 chr10 - 15196801 15197319 ENST00000415473.1 1 519 MSTRG.169 PPIAP30 0.000000 0.000000 +987 chr10 - 15213035 15213277 ENST00000450788.1 1 243 ENSG00000228181.1 RP11-455B2.9 0.000000 0.000000 +988 chr10 - 15253642 15413061 ENST00000378116.4 8 3955 MSTRG.170 FAM171A1 191.955887 275.844147 +989 chr10 - 15256170 15290814 ENST00000477161.1 3 725 MSTRG.170 FAM171A1 0.000000 0.000000 +990 chr10 + 15279491 15283766 ENST00000433455.1 2 794 MSTRG.171 RP11-25G10.2 0.000000 0.000000 +991 chr10 - 15290638 15413061 ENST00000455654.1 4 605 MSTRG.170 FAM171A1 0.000000 0.000000 +992 chr10 - 15555948 15762124 ENST00000378076.3 30 6755 MSTRG.172 ITGA8 19.052910 27.379383 +993 chr10 - 15638512 15646286 ENST00000477064.1 2 867 MSTRG.172 ITGA8 1.156391 1.661755 +994 chr10 - 15653509 15686220 ENST00000468882.1 4 425 MSTRG.172 ITGA8 0.000000 0.000000 +995 chr10 - 15820169 15860007 ENST00000378036.1 6 2452 MSTRG.173 FAM188A 0.000000 0.000000 +996 chr10 - 15820169 15902519 ENST00000277632.3 15 2381 MSTRG.173 FAM188A 91.418007 131.369370 +997 chr10 - 15820169 15902519 ENST00000477891.1 14 2329 MSTRG.173 FAM188A 32.096352 46.123051 +998 chr10 - 15820853 15824334 ENST00000476912.1 2 469 MSTRG.173 FAM188A 4.186069 6.015458 +999 chr10 - 15820853 15902519 MSTRG.173.4 13 1528 MSTRG.173 . 29.374855 42.212208 +1000 chr10 - 15830827 15879317 ENST00000418767.1 7 986 MSTRG.173 FAM188A 8.017597 11.521436 diff -r 298d81e5e138 -r d3377a16d881 test-data/annotation_stringtie.gtf.gz Binary file test-data/annotation_stringtie.gtf.gz has changed diff -r 298d81e5e138 -r d3377a16d881 test-data/gencode.hg19.chr10_1000.gtf.gz Binary file test-data/gencode.hg19.chr10_1000.gtf.gz has changed diff -r 298d81e5e138 -r d3377a16d881 test-data/stringtie_counts.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/stringtie_counts.tabular Wed Jan 14 09:30:42 2026 +0000 @@ -0,0 +1,126 @@ +geneNames EWSXFLI10 EWSXFLI11 EWSXFLI12 noXEWSXFLI10 noXEWSXFLI11 noXEWSXFLI12 +ENSG00000015171.14 8189.98616528547 8398.83469165849 8821.43636751496 8959.49769193722 8070.21722538519 9216.3325108439 +ENSG00000047056.10 1299.63627140205 1350.22183561506 1319.45447174055 2430.57969859622 2264.73949473436 2499.6066984229 +ENSG00000057608.12 46936.4185531549 49950.1514525314 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test-data/test02_samples_annotation.tabular --- a/test-data/test02_samples_annotation.tabular Wed Dec 20 18:03:04 2023 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,5 +0,0 @@ -sampleID condition -health0 health -health1 health -cancer0 cancer -cancer1 cancer diff -r 298d81e5e138 -r d3377a16d881 test-data/test10_samples_annotation.tabular --- a/test-data/test10_samples_annotation.tabular Wed Dec 20 18:03:04 2023 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,5 +0,0 @@ -sampleID condition replicate -health0 health 0 -health1 health 1 -cancer0 cancer 0 -cancer1 cancer 1 diff -r 298d81e5e138 -r d3377a16d881 test-data/transcriptome_stringtie.fasta.gz Binary file test-data/transcriptome_stringtie.fasta.gz has changed