Mercurial > repos > iuc > ivar_removereads
diff test-data/zika/Z52_a.tsv @ 0:bd2a7d1316b9 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit 4b0b7fb6c79dcd437392a496a99301d124c9f1dd"
| author | iuc |
|---|---|
| date | Mon, 30 Mar 2020 07:13:18 -0400 |
| parents | |
| children | 9eaadf03e0df |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/zika/Z52_a.tsv Mon Mar 30 07:13:18 2020 -0400 @@ -0,0 +1,17 @@ +REGION POS REF ALT REF_DP REF_RV REF_QUAL ALT_DP ALT_RV ALT_QUAL ALT_FREQ TOTAL_DP PVAL PASS +PRV 350 A T 101 101 36 5 5 35 0.0471698 106 0.0304989 FALSE +PRV 722 C +A 280 234 36 9 0 20 0.0319149 282 0.0349042 FALSE +PRV 1682 C T 1097 984 37 34 33 37 0.0300088 1133 7.79053e-10 TRUE +PRV 1965 T G 302 113 37 41 3 35 0.119534 343 2.81419e-14 TRUE +PRV 2702 A G 31 31 36 1 1 23 0.03125 32 0.507937 FALSE +PRV 2781 T G 353 70 37 48 8 36 0.117936 407 4.05758e-16 TRUE +PRV 2922 C T 263 0 36 11 0 36 0.040146 274 0.000431954 TRUE +PRV 3148 Y T 0 0 0 1324 264 36 0.77563 1707 0 TRUE +PRV 3148 Y C 0 0 0 381 75 36 0.223199 1707 0 TRUE +PRV 3295 A G 1002 1002 35 38 38 33 0.0365385 1040 4.30837e-11 TRUE +PRV 5680 C T 27 5 44 8 2 45 0.228571 35 0.000596701 TRUE +PRV 5723 T G 31 31 35 1 1 21 0.03125 32 0.507937 FALSE +PRV 6201 A G 10 0 35 2 0 25 0.166667 12 0.26087 FALSE +PRV 6211 T C 8 0 36 1 0 35 0.111111 9 0.5 FALSE +PRV 7916 C T 351 289 36 81 78 37 0.1875 432 5.39655e-27 TRUE +PRV 9713 C T 374 0 37 13 0 35 0.0335917 387 0.00010474 TRUE