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1 <?xml version="1.0"?>
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
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3 <BlastOutput>
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4 <BlastOutput_program>blastp</BlastOutput_program>
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5 <BlastOutput_version>BLASTP 2.2.28+</BlastOutput_version>
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6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
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7 <BlastOutput_db>/usr/local/syncdb/community/nr/nr</BlastOutput_db>
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8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
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9 <BlastOutput_query-def>Merlin_1</BlastOutput_query-def>
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10 <BlastOutput_query-len>229</BlastOutput_query-len>
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11 <BlastOutput_param>
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12 <Parameters>
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13 <Parameters_matrix>BLOSUM62</Parameters_matrix>
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14 <Parameters_expect>0.001</Parameters_expect>
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15 <Parameters_gap-open>11</Parameters_gap-open>
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16 <Parameters_gap-extend>1</Parameters_gap-extend>
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17 <Parameters_filter>F</Parameters_filter>
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18 </Parameters>
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19 </BlastOutput_param>
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20 <BlastOutput_iterations>
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21 <Iteration>
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22 <Iteration_iter-num>1</Iteration_iter-num>
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23 <Iteration_query-ID>Query_1</Iteration_query-ID>
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24 <Iteration_query-def>Merlin_1</Iteration_query-def>
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25 <Iteration_query-len>229</Iteration_query-len>
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26 <Iteration_hits>
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27 <Hit>
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28 <Hit_num>1</Hit_num>
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29 <Hit_id>gi|422934611|ref|YP_007004572.1|</Hit_id>
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30 <Hit_def>hypothetical protein [Enterobacteria phage ime09] >gi|339791394|gb|AEK12451.1| hypothetical protein [Enterobacteria phage ime09]</Hit_def>
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31 <Hit_accession>YP_007004572</Hit_accession>
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32 <Hit_len>685</Hit_len>
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33 <Hit_hsps>
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34 <Hsp>
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35 <Hsp_num>1</Hsp_num>
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36 <Hsp_bit-score>197.593</Hsp_bit-score>
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37 <Hsp_score>501</Hsp_score>
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38 <Hsp_evalue>3.74548e-55</Hsp_evalue>
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39 <Hsp_query-from>2</Hsp_query-from>
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40 <Hsp_query-to>229</Hsp_query-to>
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41 <Hsp_hit-from>474</Hsp_hit-from>
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42 <Hsp_hit-to>684</Hsp_hit-to>
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43 <Hsp_query-frame>0</Hsp_query-frame>
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44 <Hsp_hit-frame>0</Hsp_hit-frame>
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45 <Hsp_identity>106</Hsp_identity>
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46 <Hsp_positive>154</Hsp_positive>
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47 <Hsp_gaps>21</Hsp_gaps>
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48 <Hsp_align-len>230</Hsp_align-len>
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49 <Hsp_qseq>LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR</Hsp_qseq>
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50 <Hsp_hseq>LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK</Hsp_hseq>
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51 <Hsp_midline>L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+</Hsp_midline>
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52 </Hsp>
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53 </Hit_hsps>
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54 </Hit>
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55 <Hit>
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56 <Hit_num>2</Hit_num>
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57 <Hit_id>gi|330858714|ref|YP_004415089.1|</Hit_id>
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58 <Hit_def>hypothetical protein Shfl2p198 [Shigella phage Shfl2] >gi|327397648|gb|AEA73150.1| hypothetical protein Shfl2p198 [Shigella phage Shfl2]</Hit_def>
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59 <Hit_accession>YP_004415089</Hit_accession>
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60 <Hit_len>685</Hit_len>
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61 <Hit_hsps>
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62 <Hsp>
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63 <Hsp_num>1</Hsp_num>
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64 <Hsp_bit-score>197.593</Hsp_bit-score>
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65 <Hsp_score>501</Hsp_score>
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66 <Hsp_evalue>4.31042e-55</Hsp_evalue>
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67 <Hsp_query-from>2</Hsp_query-from>
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68 <Hsp_query-to>229</Hsp_query-to>
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69 <Hsp_hit-from>474</Hsp_hit-from>
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70 <Hsp_hit-to>684</Hsp_hit-to>
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71 <Hsp_query-frame>0</Hsp_query-frame>
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72 <Hsp_hit-frame>0</Hsp_hit-frame>
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73 <Hsp_identity>106</Hsp_identity>
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74 <Hsp_positive>154</Hsp_positive>
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75 <Hsp_gaps>21</Hsp_gaps>
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76 <Hsp_align-len>230</Hsp_align-len>
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77 <Hsp_qseq>LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR</Hsp_qseq>
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78 <Hsp_hseq>LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK</Hsp_hseq>
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79 <Hsp_midline>L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+</Hsp_midline>
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80 </Hsp>
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81 </Hit_hsps>
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82 </Hit>
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83 <Hit>
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84 <Hit_num>3</Hit_num>
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85 <Hit_id>gi|228861509|ref|YP_002854530.1|</Hit_id>
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86 <Hit_def>alt.-2 hypothetical protein [Enterobacteria phage RB14] >gi|227438525|gb|ACP30838.1| alt.-2 hypothetical protein [Enterobacteria phage RB14]</Hit_def>
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87 <Hit_accession>YP_002854530</Hit_accession>
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88 <Hit_len>685</Hit_len>
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89 <Hit_hsps>
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90 <Hsp>
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91 <Hsp_num>1</Hsp_num>
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92 <Hsp_bit-score>197.593</Hsp_bit-score>
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93 <Hsp_score>501</Hsp_score>
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94 <Hsp_evalue>4.35388e-55</Hsp_evalue>
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95 <Hsp_query-from>2</Hsp_query-from>
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96 <Hsp_query-to>229</Hsp_query-to>
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97 <Hsp_hit-from>474</Hsp_hit-from>
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98 <Hsp_hit-to>684</Hsp_hit-to>
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99 <Hsp_query-frame>0</Hsp_query-frame>
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100 <Hsp_hit-frame>0</Hsp_hit-frame>
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101 <Hsp_identity>108</Hsp_identity>
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102 <Hsp_positive>152</Hsp_positive>
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103 <Hsp_gaps>21</Hsp_gaps>
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104 <Hsp_align-len>230</Hsp_align-len>
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105 <Hsp_qseq>LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR</Hsp_qseq>
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106 <Hsp_hseq>LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGS-----------HSTYANEDAETSVGMVIKGAERVKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYFMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK</Hsp_hseq>
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107 <Hsp_midline>L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ T N + ++G VI GAE V+VIVPG L+ +P EAEVILPRG LLKINK++T K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+</Hsp_midline>
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108 </Hsp>
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109 </Hit_hsps>
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110 </Hit>
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111 </Iteration_hits>
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112 <Iteration_stat>
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113 <Statistics>
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114 <Statistics_db-num>48094830</Statistics_db-num>
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115 <Statistics_db-len>17186091396</Statistics_db-len>
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116 <Statistics_hsp-len>143</Statistics_hsp-len>
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117 <Statistics_eff-space>886533640716</Statistics_eff-space>
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118 <Statistics_kappa>0.041</Statistics_kappa>
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119 <Statistics_lambda>0.267</Statistics_lambda>
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120 <Statistics_entropy>0.14</Statistics_entropy>
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121 </Statistics>
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122 </Iteration_stat>
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123 </Iteration>
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124 </BlastOutput_iterations>
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125 </BlastOutput>
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126
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